Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsN22_01G048050 | OGI:01126010 | 16/16 | N22 | OsN22RS2 | Gramene(+IsoSeq) | Chr01:42517099-42520926 | ||||||||
| Gene Symbol | RLCK57, OsRLCK57 | ||||||||||
| DNA seq | GAATGAATCCGCTATGGATTTGAGTAGCCAAGTCCACTAAATTTTGCCGTCAATTTCTGTTTTATTCAAGGTACATATATATAATTGGTGTAGTACGTTAAAAAAAATGAAAAAAAGAACTGTACAAGTTGTTGCAAAAGGGAGAAAGGAAGGAAGGAAGGAAGGAGAAGAGTCGGTCGGATTTGCAGCGGCCAACATGAATGAAGAAGCTTAATCAAGCAATCAATCTGCATGCCTCTTGATTTACAAGTCACTCATCATCAAGGAATATAATAATCTACTAATTAACACGCCGTCGCCATATGTGTCACTCAGGCAGGCAGAGGCGACGCCGACAGCCGCCTCGGACGAGCACCAGCACCAGCAGACGACCTGCCGCTGGCGTTGAAGCCACGGCCGCCGAGCAACATCCTGCTCTGCGGCGACCGATGATGATGAGACGTGGTCGTCGTCTCCTGAAGCTGCTCCAGCGCGGCGACCACCTGGTGCATGGTGGGCCGGTTCTTGGCGTCGGCGGAGAGGCACTGCAGCGCCAGCGCCGCCGCTTTGTGGGCTCCGGCGAGCGAGTACTGGCCGGCGAGGCGGGCGTCCAGGATGCGGAAGATCCGGCGCCTGCTGCTGAGGTAGGGCCGAGCCCACTCCACCAGGTTGTGCTCGCCGGCGGGGCGGTTCTTGTCCAGCGCGCGCCGCCCCGACAGCATCTCCACCATCACCACCCCGAAGCTGTACACGTCGCTCTTCGCACTCAGATGCCCTGCACCATCCAACATTCAGATGCATCATCATTAGCTGAGCTACGTTTCTGTTTAGATGCTGTATGCATTACAGATTAACCGACACCTACCTAGTGGGCTTAATACTATTAGAGTACAGCTCATCTGAGACTACAGGTCTTTCTCGACATTCTTAATTTCTTAGTATATAGTATATATCTAGGTAGTAGTACTGTAGTACGTACAAGATTGTGCAGCATTTTTTATTTCTGTGGATATATGATCGAGTGAGTAATTAACTAAAGAAAGTGTAATTAATTTGGTTTAGCACATGTGCTCAAGGGGTCCAGTCCACATTTAAGCAAAGCCAGTTAGGCCGGTCTGAAACCATGACAAAAAAATTGGACAGACTTGTCTGCACCTAACTACTCTATATATGACTTCAGCTTTCAACAGGAGAGGATGAGTATTCTTTACTACTTCGTCTAGTGCTTCAGGACGAGCACAAGCTGCCAAGCAGACCAGCTTTCATTATAACCTTTTAATCCTTACACATACCTACTGCATCTGCATTCATAAGACTGTCTCCAACAAGTGACCCATAAGAGCACCTAAATCCAAAATGGGTCTTCGATAGTACTATTTTAGCCTCCAACAGAGTACCTATACAGAAGACTCATTTTACGTGCTATAAGAAGCATAACCTAAATCTGAGTATCCTCTCTCCTGAAGACCTATTTACAGGAAGGGTTCTCTTTTAGGTCTTATTGTTAGAGAAGACCAAAAATAGGTATTAAACTATTTGACTTTAGCGCTATGCAAATATGAAATGGGTCCTGTATTTTGGGTTTGATTGTTGGAGATAGCCTAACAACAACAGCTAGCAACCCTGGCAAATGCAGAGATTGTCTTGCTAAAATGCATCTGACCTTTCATTATCATTACATATATAAAGTCTGATCTTTAACATATACTTCTACTAGTAACAACTGAAATTCTATAAATAGTTGTAGGAAAAGGTTTGAGCAAAACAAGAATCAAATTGAAAATTTGCAGCGCAGGTCTGAATGCTTACCTGTCGCAAGATATTCAGGAGCAGCATATCCGTATGTGCCCATAACTCTTGTTGAGACATGGCTCTTGTCACCAGTTGGCCCATCCTTTGCCAACCCGAAATCAGACAGCTTTGCATTGTAGTTCTGTCAGTGACGAACAAGAGAGTAGAGTTGAGGCACCGAATCGAATTATCATATATTGATCAGCAATTTAACAACTGACAATTAATTAATGCTTGTGAGATGAGGATAAAACGACGAACGTATATTGATAGTAGCGTACCGAATCGAGAAGAACATTGGAAGTCTTGAAATCACGGTAGATAACTTTGGCCTTGTCGCTGTGGAGAAAGGCAAGTCCCTTTGCTGCTCCAAGGGCAACTTTCATTCGAAGATTCCAGGAGAGAGGCTGAAAATGTGAGCCCCCTGCATTGTGCAAGGCCGTCCAAAACTTGTCAACACCACCATCCGTTTCAGACTTCTCGGTTGAGAAAAATCAAAATCATCCCGAATATATATACTAGTAATAATAAATTAAAAGAAAAAGAAAAGGGCAGTTGAGAGGAGGCGCGGCTTACTCCTGAAAAGATGATTCTCCAAGCTTCCCCGAGGCATGAACTCGTAGACAAGAAGCCTCTGCTCATCTTGAAGGCAGTAGCCTACAAGCTTTACAAGATTTGGGTGTGACAGTTGCCCAAGGTAGTTCACTTCGGCCTGCAAATTAAAATGCAAGTTATTATATACTACAGTAGTATATCAATCAAGAGTTATGCAGAAAGAAAGAAAATCCATACCAGCCATTCCCTGTGGCCCTGGAAGCCGTCCTGGTTGAGCTTCTTGACGGCGATGACCATGCCGGTGCCGGGCCTGCTGGGGAGGAAGGTGTTCTCGTCCACCCAACCCTTGAAGACGGAGCCGAAGCCTCCCTCGCCGAGCACGCTGTCGGGCCGGAAGTTCCTCGTCGCCGTCTTGAGCTCGTTGAACGCGAAGCTCCTCACGTTGGCACACCGCAGGATCTCGCCCTCGCTCCGTGGGGTCACCGCCGCCACCGACGACGACACCCGGCTGCTCAGCCCCGTCCCCTTCCTCCTGCTTCCTGATCTTCTTCTTCTTGAACCTGACCACCAATTAATGAGCTCATATCATACGCATGCATTGTCAATTTACCAACCAGTTAACGCCACCGCACAATGCAGAAGCCTCATCTATATAACAACTTCTTTCTCAGATTGATTGAGATGACCATAATATTTAGTTACAAAAGTGAATGATTTCATACTATACTAGTCCATCAAGGATTAGTACAAGATGATATACTACTAGTATGTGCAGGCGTCGTCCTGTCTCTGTCTGAAACCGATCGCTTATTTCAGTTCAACTGGAACTGGAAACGGCATGATCTACCTAACCTACTAGGATCGATTTCAACAAACTCAAGCAATTAGGAATGATCAACAAATTGCAGGCAGGCACAAACGAACATCTCCATTCCTAATCATACATGCCTCACTACTCAGCGGTTACTTTTTTACTTGAATCAAGAATCTATCTACTCCTAGTACGTCCTATGCAGCTAGCTAGATGGTGAAATATATACGAGAGCGAATTGAAGAAGCTAGATTACCAGATGCGTTCCGGGAGATGGCGTCGGAGCTAATCTTGGTTCCGCAGCAATTGCCCATGGCACGCAGGGGATGGAGAGCGAGCTCGCTGCTCTGATGCAGGGAAGGAATAGGATGCAAGGGAAGGGCAGCTAGTTATAAATAAAGGTGAGAGCTTTGCTTTACAATAAAATTAAGATCTCTACAGCTAGTAATAAGGCAGGTCTGAACAATGGATCACGGGATATATGAGGGTTGAGCTTGATTGTGTGCTACTGCTACTGTTAGCTGCCTCTTAATTCCTGCCTGCTAATTAAATCAAAGGTTGACCTTCTGGCCCCCTCTCTCTCACGCCCACTTGTGATTAGGATTATTGTGGGTGATGGATGGATCAAGACTCAAGAGAAGAGATCATCAAAGTCCTGGATGGGGATGGAAGATTTCAGACCTTGAAGCTAT
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| CDS seq | ATGGGCAATTGCTGCGGAACCAAGATTAGCTCCGACGCCATCTCCCGGAACGCATCTGGTTCAAGAAGAAGAAGATCAGGAAGCAGGAGGAAGGGGACGGGGCTGAGCAGCCGGGTGTCGTCGTCGGTGGCGGCGGTGACCCCACGGAGCGAGGGCGAGATCCTGCGGTGTGCCAACGTGAGGAGCTTCGCGTTCAACGAGCTCAAGACGGCGACGAGGAACTTCCGGCCCGACAGCGTGCTCGGCGAGGGAGGCTTCGGCTCCGTCTTCAAGGGTTGGGTGGACGAGAACACCTTCCTCCCCAGCAGGCCCGGCACCGGCATGGTCATCGCCGTCAAGAAGCTCAACCAGGACGGCTTCCAGGGCCACAGGGAATGGCTGGCCGAAGTGAACTACCTTGGGCAACTGTCACACCCAAATCTTGTAAAGCTTGTAGGCTACTGCCTTCAAGATGAGCAGAGGCTTCTTGTCTACGAGTTCATGCCTCGGGGAAGCTTGGAGAATCATCTTTTCAGGAGGGGCTCACATTTTCAGCCTCTCTCCTGGAATCTTCGAATGAAAGTTGCCCTTGGAGCAGCAAAGGGACTTGCCTTTCTCCACAGCGACAAGGCCAAAGTTATCTACCGTGATTTCAAGACTTCCAATGTTCTTCTCGATTCGAACTACAATGCAAAGCTGTCTGATTTCGGGTTGGCAAAGGATGGGCCAACTGGTGACAAGAGCCATGTCTCAACAAGAGTTATGGGCACATACGGATATGCTGCTCCTGAATATCTTGCGACAGGGCATCTGAGTGCGAAGAGCGACGTGTACAGCTTCGGGGTGGTGATGGTGGAGATGCTGTCGGGGCGGCGCGCGCTGGACAAGAACCGCCCCGCCGGCGAGCACAACCTGGTGGAGTGGGCTCGGCCCTACCTCAGCAGCAGGCGCCGGATCTTCCGCATCCTGGACGCCCGCCTCGCCGGCCAGTACTCGCTCGCCGGAGCCCACAAAGCGGCGGCGCTGGCGCTGCAGTGCCTCTCCGCCGACGCCAAGAACCGGCCCACCATGCACCAGGTGGTCGCCGCGCTGGAGCAGCTTCAGGAGACGACGACCACGTCTCATCATCATCGGTCGCCGCAGAGCAGGATGTTGCTCGGCGGCCGTGGCTTCAACGCCAGCGGCAGGTCGTCTGCTGGTGCTGGTGCTCGTCCGAGGCGGCTGTCGGCGTCGCCTCTGCCTGCCTGA
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| Protein seq | MGNCCGTKISSDAISRNASGSRRRRSGSRRKGTGLSSRVSSSVAAVTPRSEGEILRCANVRSFAFNELKTATRNFRPDSVLGEGGFGSVFKGWVDENTFLPSRPGTGMVIAVKKLNQDGFQGHREWLAEVNYLGQLSHPNLVKLVGYCLQDEQRLLVYEFMPRGSLENHLFRRGSHFQPLSWNLRMKVALGAAKGLAFLHSDKAKVIYRDFKTSNVLLDSNYNAKLSDFGLAKDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLSAKSDVYSFGVVMVEMLSGRRALDKNRPAGEHNLVEWARPYLSSRRRIFRILDARLAGQYSLAGAHKAAALALQCLSADAKNRPTMHQVVAALEQLQETTTTSHHHRSPQSRMLLGGRGFNASGRSSAGAGARPRRLSASPLPA |
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| Function | Receptor-like cytoplasmic kinase 176 [UniProtKB/Swiss-Prot:Q65XV8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_01G048050 | OsN22_01G048050_01 | Chr01 | 42517099 | 42520926 | - | NAM | ||
| CDS seq | ATGGGCAATTGCTGCGGAACCAAGATTAGCTCCGACGCCATCTCCCGGAACGCATCTGGTTCAAGAAGAAGAAGATCAGGAAGCAGGAGGAAGGGGACGGGGCTGAGCAGCCGGGTGTCGTCGTCGGTGGCGGCGGTGACCCCACGGAGCGAGGGCGAGATCCTGCGGTGTGCCAACGTGAGGAGCTTCGCGTTCAACGAGCTCAAGACGGCGACGAGGAACTTCCGGCCCGACAGCGTGCTCGGCGAGGGAGGCTTCGGCTCCGTCTTCAAGGGTTGGGTGGACGAGAACACCTTCCTCCCCAGCAGGCCCGGCACCGGCATGGTCATCGCCGTCAAGAAGCTCAACCAGGACGGCTTCCAGGGCCACAGGGAATGGCTGGCCGAAGTGAACTACCTTGGGCAACTGTCACACCCAAATCTTGTAAAGCTTGTAGGCTACTGCCTTCAAGATGAGCAGAGGCTTCTTGTCTACGAGTTCATGCCTCGGGGAAGCTTGGAGAATCATCTTTTCAGGAGGGGCTCACATTTTCAGCCTCTCTCCTGGAATCTTCGAATGAAAGTTGCCCTTGGAGCAGCAAAGGGACTTGCCTTTCTCCACAGCGACAAGGCCAAAGTTATCTACCGTGATTTCAAGACTTCCAATGTTCTTCTCGATTCGAACTACAATGCAAAGCTGTCTGATTTCGGGTTGGCAAAGGATGGGCCAACTGGTGACAAGAGCCATGTCTCAACAAGAGTTATGGGCACATACGGATATGCTGCTCCTGAATATCTTGCGACAGGGCATCTGAGTGCGAAGAGCGACGTGTACAGCTTCGGGGTGGTGATGGTGGAGATGCTGTCGGGGCGGCGCGCGCTGGACAAGAACCGCCCCGCCGGCGAGCACAACCTGGTGGAGTGGGCTCGGCCCTACCTCAGCAGCAGGCGCCGGATCTTCCGCATCCTGGACGCCCGCCTCGCCGGCCAGTACTCGCTCGCCGGAGCCCACAAAGCGGCGGCGCTGGCGCTGCAGTGCCTCTCCGCCGACGCCAAGAACCGGCCCACCATGCACCAGGTGGTCGCCGCGCTGGAGCAGCTTCAGGAGACGACGACCACGTCTCATCATCATCGGTCGCCGCAGAGCAGGATGTTGCTCGGCGGCCGTGGCTTCAACGCCAGCGGCAGGTCGTCTGCTGGTGCTGGTGCTCGTCCGAGGCGGCTGTCGGCGTCGCCTCTGCCTGCCTGA
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| Protein seq | MGNCCGTKISSDAISRNASGSRRRRSGSRRKGTGLSSRVSSSVAAVTPRSEGEILRCANVRSFAFNELKTATRNFRPDSVLGEGGFGSVFKGWVDENTFLPSRPGTGMVIAVKKLNQDGFQGHREWLAEVNYLGQLSHPNLVKLVGYCLQDEQRLLVYEFMPRGSLENHLFRRGSHFQPLSWNLRMKVALGAAKGLAFLHSDKAKVIYRDFKTSNVLLDSNYNAKLSDFGLAKDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLSAKSDVYSFGVVMVEMLSGRRALDKNRPAGEHNLVEWARPYLSSRRRIFRILDARLAGQYSLAGAHKAAALALQCLSADAKNRPTMHQVVAALEQLQETTTTSHHHRSPQSRMLLGGRGFNASGRSSAGAGARPRRLSASPLPA
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 1.374186 | 0.185200 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0973500 | RBH | 0.265223 | 0.0 | 1.419283 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g74200 | RBH | 0.172056 | 0.0 | 0.409411 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0973500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0048810 | RBH | 0.0 | 0.000000 | 0.561053 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0048300 | RBH | 0.0 | 0.561277 | 0.166514 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0048700 | RBH | 0.000000 | 0.0 | 0.518344 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0048230 | RBH | 0.0 | 0.137301 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0047760 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0706400 | RBH | 0.7110305 | 2.200169 | 2.1693475 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0047230 | RBH | 0.000000 | 0.167430 | 0.064324 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0707900 | RBH | 1.339769 | 2.7295165 | 0.9291545 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0047920 | RBH | 0.085220 | 0.120412 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0047710 | RBH | 0.000000 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0048010 | RBH | 0.000000 | 3.281088 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0047970 | RBH | 0.000000 | 0.000000 | 0.477613 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0047720 | RBH | 0.0 | 0.361351 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G000750 | RBH | 0.630673 | 1.266678 | 3.200447 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0047820 | RBH | 0.000000 | 2.050337 | 2.280912 |
