Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsN22_01G034960 | OGI:01098200 | 16/16 | N22 | OsN22RS2 | Gramene(+IsoSeq) | Chr01:32508197-32510067 | ||||||||
| Gene Symbol | BHLH185, OsbHLH185, bHLH185 | ||||||||||
| DNA seq | ATGGAGAACGACGACGACGTGGAGCATCCCTTCTACTACTTCGTCCACGACGACGCGGCCGCCGGCGTCGACGACCACGAGGAGTTGCTGGCAAGCCTCGGCTTCCTCCTCCCTCCTCCTCCTCCGCCGCCGCCGCCACCGCAGCCTGATCAGGGAAGGAGCGCCTTCGCGGCGTACCAGAGTACCGTGGCGATGGCGTCGTCGTCGTCGTCGTCGGAGTCTCTGAGCCGGCGGTACCACTCCTCTGCGTCGAACGTCCACCGGAGAATGCACAGGTTCCTCAGGAGCATCTATGACGACGCCGGGGACGACGCGGGGGCAACCGCGGAAATGCAGCCGGCGGAGGGCGAGCAGCAGCAGGCGGCGCCGAGCGGCGGCAGCGCGCGGTTCCGGCACATCATGCGGGAGCGGCTGCGTCGGGAGCGCCTCAGCCAGGGCTACGCCGACCTCCAAGCCATCCTCCCAACCGGCGCATCATCATCAAAAGTACTCGTAAAATCACTCATCAGAAACTACATGAGCGTGCATTCTTTTCAATTGTTCGATCGTCCTGCTCGGCTCATCATTTTTCGCCGCCATTTGTACCTCAGGGTGGCAAGAACACCATCGTCGCCGCGGCGGCAAACTACATCCGGGAGCTGGAGGGGAGGAAGGGGTGGCTCTGCGCGCAGAACGAGTTGCTGGAGCGGACGACGCCGAAGCCCGGCGCCGGCTTGGTGGTGAAGGTGCGCGCCGAGAGTGAGCTCGGCTCGACGGTGGACGTGTTCGAGGCGGTGCTCCGGCGGCTCAAGGCCATGGACGAGCTGCAGGTGACGGCGATCCAGTCGTGGTTCGGCGCCGGCGGGATGTGGATGGACGTCGCGGTGGAGTCCAAGGTACATTACAAATGTCGCGCACAATGAGAAAACAAGTTCATGTGCTTCTGATTTGTTAATATTAATCAACATCAACTGTGTGCCATTGATTGATGGTTGAAAAGTTCAAAAAAATAACAAGTTAGTGTCGTAAAAACATATGTTTAGTATGTGCTACTTGGTGATCATGTGTAAAGAAAAAATGAACTGTGGTAGTTGACTTGAATGCATGACTTCATAGCGAGTCATGTAAACGAGTGACAGTTTTATATATGTGGACCAGATTAAACTTATAAACTCATTGATTTTGTCGCTACTGCAAAAGTCGAGTATAAAGTATAAACCCCACATTCGTGTGGCTAGATAACTTAATGTAAAGCTGAACTTGTTTGTTTATTTACGACTAGTAGTGTCAATTGGATCAACTTGATCTCATTGCTTTCATTAAAAAAACAGTATGCAACAACAAATGACATGCATGAATTAATCAATGCACAAGATATTAAAAGTAGGAGGAATATATCAGGCGCTGAAAATTCTTCCCTGGCCAGAATAAGTTTGCCAGATGTTTCACATTCCAGCTTAATTTTAGCACATTTTAGGAGGATTGACAATACTGGCATTGATCTCCATCAACCATGCATGCATCTATTGTCTCAGTTATGCAGATGAGAATTAATTTTGTGTGGTTTAACAACAAGTACTACATCCCAAAATAAATAAATTATGTATACGAATCTGAATATATAACAAAATTTGATTTATTTTAGGAGAAGGAGGATTAATTATATATTATTGTTTTTCTTGATTTTCCTTATACTACTTACTAATTAAATTTTCCATTTAATTTTCTCGTACGCAAAGATATCTTCGCGAGAGGTGGACAAAGCAATAACAAATGCCTTGAAGGAACTTCAGGAGATCGAATACTCCGAATACTCCTGCTTGCAAGATCCAATGAGAAGTGGGACGAGCTTTAGTTGTCAAGTTGAAAGTGGTGTACTACTAATGAGTTGA
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| CDS seq | ATGGAGAACGACGACGACGTGGAGCATCCCTTCTACTACTTCGTCCACGACGACGCGGCCGCCGGCGTCGACGACCACGAGGAGTTGCTGGCAAGCCTCGGCTTCCTCCTCCCTCCTCCTCCTCCGCCGCCGCCGCCACCGCAGCCTGATCAGGGAAGGAGCGCCTTCGCGGCGTACCAGAGTACCGTGGCGATGGCGTCGTCGTCGTCGTCGTCGGAGTCTCTGAGCCGGCGGTACCACTCCTCTGCGTCGAACGTCCACCGGAGAATGCACAGGTTCCTCAGGAGCATCTATGACGACGCCGGGGACGACGCGGGGGCAACCGCGGAAATGCAGCCGGCGGAGGGCGAGCAGCAGCAGGCGGCGCCGAGCGGCGGCAGCGCGCGGTTCCGGCACATCATGCGGGAGCGGCTGCGTCGGGAGCGCCTCAGCCAGGGCTACGCCGACCTCCAAGCCATCCTCCCAACCGGCGCATCATCATCAAAAGTACTCGTAAAATCACTCATCAGAAACTACATGAGCGGTGGCAAGAACACCATCGTCGCCGCGGCGGCAAACTACATCCGGGAGCTGGAGGGGAGGAAGGGGTGGCTCTGCGCGCAGAACGAGTTGCTGGAGCGGACGACGCCGAAGCCCGGCGCCGGCTTGGTGGTGAAGGTGCGCGCCGAGAGTGAGCTCGGCTCGACGGTGGACGTGTTCGAGGCGGTGCTCCGGCGGCTCAAGGCCATGGACGAGCTGCAGGTGACGGCGATCCAGTCGTGGTTCGGCGCCGGCGGGATGTGGATGGACGTCGCGGTGGAGTCCAAGATATCTTCGCGAGAGGTGGACAAAGCAATAACAAATGCCTTGAAGGAACTTCAGGAGATCGAATACTCCGAATACTCCTGCTTGCAAGATCCAATGAGAAGTGGGACGAGCTTTAGTTGTCAAGTTGAAAGTGGTGTACTACTAATGAGTTGA
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| Protein seq | MENDDDVEHPFYYFVHDDAAAGVDDHEELLASLGFLLPPPPPPPPPPQPDQGRSAFAAYQSTVAMASSSSSSESLSRRYHSSASNVHRRMHRFLRSIYDDAGDDAGATAEMQPAEGEQQQAAPSGGSARFRHIMRERLRRERLSQGYADLQAILPTGASSSKVLVKSLIRNYMSGGKNTIVAAAANYIRELEGRKGWLCAQNELLERTTPKPGAGLVVKVRAESELGSTVDVFEAVLRRLKAMDELQVTAIQSWFGAGGMWMDVAVESKISSREVDKAITNALKELQEIEYSEYSCLQDPMRSGTSFSCQVESGVLLMS |
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| Function | Transcription factor BHLH148 [UniProtKB/Swiss-Prot:Q75KV9] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_01G034960 | OsN22_01G034960_01 | Chr01 | 32508197 | 32510067 | + | NAM | ||
| CDS seq | ATGGAGAACGACGACGACGTGGAGCATCCCTTCTACTACTTCGTCCACGACGACGCGGCCGCCGGCGTCGACGACCACGAGGAGTTGCTGGCAAGCCTCGGCTTCCTCCTCCCTCCTCCTCCTCCGCCGCCGCCGCCACCGCAGCCTGATCAGGGAAGGAGCGCCTTCGCGGCGTACCAGAGTACCGTGGCGATGGCGTCGTCGTCGTCGTCGTCGGAGTCTCTGAGCCGGCGGTACCACTCCTCTGCGTCGAACGTCCACCGGAGAATGCACAGGTTCCTCAGGAGCATCTATGACGACGCCGGGGACGACGCGGGGGCAACCGCGGAAATGCAGCCGGCGGAGGGCGAGCAGCAGCAGGCGGCGCCGAGCGGCGGCAGCGCGCGGTTCCGGCACATCATGCGGGAGCGGCTGCGTCGGGAGCGCCTCAGCCAGGGCTACGCCGACCTCCAAGCCATCCTCCCAACCGGCGCATCATCATCAAAAGTACTCGTAAAATCACTCATCAGAAACTACATGAGCGGTGGCAAGAACACCATCGTCGCCGCGGCGGCAAACTACATCCGGGAGCTGGAGGGGAGGAAGGGGTGGCTCTGCGCGCAGAACGAGTTGCTGGAGCGGACGACGCCGAAGCCCGGCGCCGGCTTGGTGGTGAAGGTGCGCGCCGAGAGTGAGCTCGGCTCGACGGTGGACGTGTTCGAGGCGGTGCTCCGGCGGCTCAAGGCCATGGACGAGCTGCAGGTGACGGCGATCCAGTCGTGGTTCGGCGCCGGCGGGATGTGGATGGACGTCGCGGTGGAGTCCAAGATATCTTCGCGAGAGGTGGACAAAGCAATAACAAATGCCTTGAAGGAACTTCAGGAGATCGAATACTCCGAATACTCCTGCTTGCAAGATCCAATGAGAAGTGGGACGAGCTTTAGTTGTCAAGTTGAAAGTGGTGTACTACTAATGAGTTGA
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| Protein seq | MENDDDVEHPFYYFVHDDAAAGVDDHEELLASLGFLLPPPPPPPPPPQPDQGRSAFAAYQSTVAMASSSSSSESLSRRYHSSASNVHRRMHRFLRSIYDDAGDDAGATAEMQPAEGEQQQAAPSGGSARFRHIMRERLRRERLSQGYADLQAILPTGASSSKVLVKSLIRNYMSGGKNTIVAAAANYIRELEGRKGWLCAQNELLERTTPKPGAGLVVKVRAESELGSTVDVFEAVLRRLKAMDELQVTAIQSWFGAGGMWMDVAVESKISSREVDKAITNALKELQEIEYSEYSCLQDPMRSGTSFSCQVESGVLLMS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0773800 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g56690 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0773800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0035430 | RBH | 0.000000 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0034940 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0035330 | RBH | 0.0 | 0.0 | 1.157785 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0034670 | RBH | 0.000000 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0034420 | RBH | 0.0 | 0.0 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0541400 | RBH | 0.0601395 | 20.192685 | 0.074622 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0034170 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0537700 | RBH | 0.1912775 | 17.1344635 | 0.024629 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0034320 | RBH | 0.000000 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0034380 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0034610 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0034690 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0034490 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0034620 | RBH | 0.0 | 0.0 | 0.0 |
