Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsN22_01G031890 | OGI:01091810 | 16/16 | N22 | OsN22RS2 | Gramene(+IsoSeq) | Chr01:30168451-30169946 | ||||||||
| Gene Symbol | OsLRP, OsLRR1, LRR1 | ||||||||||
| DNA seq | ATGGCAGCCTCCGTCGCTGTGTTCGTGTGCCTCCTGTCCGTGGCCGCGGCGGCGGCGTCCATGGACCCGGCGGAGAGGGAGGTGCTGTTCCTCGTCATGGAGGCGGTCTCGTCTGACCGGGACTGGCGCTCCGAGAGCCCCGACCCTTGCGGCGCGCCGTGGCCGGGGCTGGAGTGCAAGCCGGCAGCCGGCGACGCCGCGGCGGCGCTGCTGCGCGTCACGCGGCTCGACTTCGGCGTGGAGCCCAACCCGTCGTGCAAGGACACGGCCGCGTTCCCGCCGCTGGTGTTCTCCTCCCTGCCCCACCTCCAGTCCCTCTTCTTCGTCGGCTGCTTCAAGAACCCGGCGGCCAACACGTCCCTCGTCCTGCCGCCCGCCGCCAACCTCTCGACCTCCAGCCTGCAGCAGCTCAGCATCAGGGCCAACCCGTCCCTGTCCGGCGTGATGCCGCCGCAGCTGGCAACGCTCAGGTCGCTCCAGGTGCTCACCATCTCCCAGAACGGATTGATCCGCGGCGAGATCCCGCAGGGCATCGGCGAGCTCACGTCGCTGGTGCACCTCGACCTCAGCTACAACTCGCTCACCGGGCCGGTGCCGAGCGAGATCAGCGAGCTGAAGAGCTTGGTCGGTCTGGACCTGAGCTACAACTCGCTGTCCGGCGCCATCCCGAGCCGGATTGGTGAGCTGCGGCAGCTGCAGAAGCTGGACCTGAGCTCCAACAATCTCACCGGCGGCATCCCGGTCAGCATCGCCAACCTGAGCTCGCTTACCTTCTTGGCGCTGAGCAGCAATGGCCTGAGTGGTCACTTCCCTCCTGGACTCTCCGGCCTCCGAAACCTCCAGTACTTGATCATGGACAACAACCCAATGAATGTCCCCTTACCTTCCGAGCTCGGTGGTCTCCCTCGTCTTCAAGAACTCCGGCTGGCCGGCTCCGGCTACTCGGGACAGATACCCGCGGCGTTTGGTCAGCTGGCGAGCTTGACGACGCTGTCACTCGAAGACAACAACCTCACCGGAGAAATCCCTCCGGTGCTGACCAGGCTGACAAGGATGTATCACCTGAACCTGAGCAACAATGGGCTGGGCGGCGCCGTGCCTTTCGACGGCGCGTTCTTGCGGCGGCTCGGCCAGAACCTCGACCTGAGCGGCAACGCGGGGCTGTGCCTGGATGACCGGATGGTCGTGCGGGGCGTCGGCGTCGGCGTCGGCGCCTGCCACGCCGGCGGCGGCGGTGATGGCTCGTTGGCGCCCGGAGGAGTTACGGGGGCAGCAGCAACGGTGAGGGGTTCCGTGGACGGTTACCCGTTTCGGCTTCTCGACCATGCCTGCTTGGTCGTGGCCTGTCTGGTTTCTTTGAATTAGTACGTGTAGCTTTTGTCTCACTGTACGATGTACTACTACTTCTGTCTAGAACTAAGTACGAGTAGCTGTGTGTTCAAGCGCTAATTAATCTGCAGATAATCATTAATTAGTAGTACACGCCTACACGGAAC
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| CDS seq | ATGGCAGCCTCCGTCGCTGTGTTCGTGTGCCTCCTGTCCGTGGCCGCGGCGGCGGCGTCCATGGACCCGGCGGAGAGGGAGGTGCTGTTCCTCGTCATGGAGGCGGTCTCGTCTGACCGGGACTGGCGCTCCGAGAGCCCCGACCCTTGCGGCGCGCCGTGGCCGGGGCTGGAGTGCAAGCCGGCAGCCGGCGACGCCGCGGCGGCGCTGCTGCGCGTCACGCGGCTCGACTTCGGCGTGGAGCCCAACCCGTCGTGCAAGGACACGGCCGCGTTCCCGCCGCTGGTGTTCTCCTCCCTGCCCCACCTCCAGTCCCTCTTCTTCGTCGGCTGCTTCAAGAACCCGGCGGCCAACACGTCCCTCGTCCTGCCGCCCGCCGCCAACCTCTCGACCTCCAGCCTGCAGCAGCTCAGCATCAGGGCCAACCCGTCCCTGTCCGGCGTGATGCCGCCGCAGCTGGCAACGCTCAGGTCGCTCCAGGTGCTCACCATCTCCCAGAACGGATTGATCCGCGGCGAGATCCCGCAGGGCATCGGCGAGCTCACGTCGCTGGTGCACCTCGACCTCAGCTACAACTCGCTCACCGGGCCGGTGCCGAGCGAGATCAGCGAGCTGAAGAGCTTGGTCGGTCTGGACCTGAGCTACAACTCGCTGTCCGGCGCCATCCCGAGCCGGATTGGTGAGCTGCGGCAGCTGCAGAAGCTGGACCTGAGCTCCAACAATCTCACCGGCGGCATCCCGGTCAGCATCGCCAACCTGAGCTCGCTTACCTTCTTGGCGCTGAGCAGCAATGGCCTGAGTGGTCACTTCCCTCCTGGACTCTCCGGCCTCCGAAACCTCCAGTACTTGATCATGGACAACAACCCAATGAATGTCCCCTTACCTTCCGAGCTCGGTGGTCTCCCTCGTCTTCAAGAACTCCGGCTGGCCGGCTCCGGCTACTCGGGACAGATACCCGCGGCGTTTGGTCAGCTGGCGAGCTTGACGACGCTGTCACTCGAAGACAACAACCTCACCGGAGAAATCCCTCCGGTGCTGACCAGGCTGACAAGGATGTATCACCTGAACCTGAGCAACAATGGGCTGGGCGGCGCCGTGCCTTTCGACGGCGCGTTCTTGCGGCGGCTCGGCCAGAACCTCGACCTGAGCGGCAACGCGGGGCTGTGCCTGGATGACCGGATGGTCGTGCGGGGCGTCGGCGTCGGCGTCGGCGCCTGCCACGCCGGCGGCGGCGGTGATGGCTCGTTGGCGCCCGGAGGAGTTACGGGGGCAGCAGCAACGGTGAGGGGTTCCGTGGACGGTTACCCGTTTCGGCTTCTCGACCATGCCTGCTTGGTCGTGGCCTGTCTGGTTTCTTTGAATTAG
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| Protein seq | MAASVAVFVCLLSVAAAAASMDPAEREVLFLVMEAVSSDRDWRSESPDPCGAPWPGLECKPAAGDAAAALLRVTRLDFGVEPNPSCKDTAAFPPLVFSSLPHLQSLFFVGCFKNPAANTSLVLPPAANLSTSSLQQLSIRANPSLSGVMPPQLATLRSLQVLTISQNGLIRGEIPQGIGELTSLVHLDLSYNSLTGPVPSEISELKSLVGLDLSYNSLSGAIPSRIGELRQLQKLDLSSNNLTGGIPVSIANLSSLTFLALSSNGLSGHFPPGLSGLRNLQYLIMDNNPMNVPLPSELGGLPRLQELRLAGSGYSGQIPAAFGQLASLTTLSLEDNNLTGEIPPVLTRLTRMYHLNLSNNGLGGAVPFDGAFLRRLGQNLDLSGNAGLCLDDRMVVRGVGVGVGACHAGGGGDGSLAPGGVTGAAATVRGSVDGYPFRLLDHACLVVACLVSLN |
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| Function | Receptor like protein 29 [UniProtKB/Swiss-Prot:Q9SJH6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_01G031890 | OsN22_01G031890_01 | Chr01 | 30168451 | 30169946 | + | NAM | ||
| CDS seq | ATGGCAGCCTCCGTCGCTGTGTTCGTGTGCCTCCTGTCCGTGGCCGCGGCGGCGGCGTCCATGGACCCGGCGGAGAGGGAGGTGCTGTTCCTCGTCATGGAGGCGGTCTCGTCTGACCGGGACTGGCGCTCCGAGAGCCCCGACCCTTGCGGCGCGCCGTGGCCGGGGCTGGAGTGCAAGCCGGCAGCCGGCGACGCCGCGGCGGCGCTGCTGCGCGTCACGCGGCTCGACTTCGGCGTGGAGCCCAACCCGTCGTGCAAGGACACGGCCGCGTTCCCGCCGCTGGTGTTCTCCTCCCTGCCCCACCTCCAGTCCCTCTTCTTCGTCGGCTGCTTCAAGAACCCGGCGGCCAACACGTCCCTCGTCCTGCCGCCCGCCGCCAACCTCTCGACCTCCAGCCTGCAGCAGCTCAGCATCAGGGCCAACCCGTCCCTGTCCGGCGTGATGCCGCCGCAGCTGGCAACGCTCAGGTCGCTCCAGGTGCTCACCATCTCCCAGAACGGATTGATCCGCGGCGAGATCCCGCAGGGCATCGGCGAGCTCACGTCGCTGGTGCACCTCGACCTCAGCTACAACTCGCTCACCGGGCCGGTGCCGAGCGAGATCAGCGAGCTGAAGAGCTTGGTCGGTCTGGACCTGAGCTACAACTCGCTGTCCGGCGCCATCCCGAGCCGGATTGGTGAGCTGCGGCAGCTGCAGAAGCTGGACCTGAGCTCCAACAATCTCACCGGCGGCATCCCGGTCAGCATCGCCAACCTGAGCTCGCTTACCTTCTTGGCGCTGAGCAGCAATGGCCTGAGTGGTCACTTCCCTCCTGGACTCTCCGGCCTCCGAAACCTCCAGTACTTGATCATGGACAACAACCCAATGAATGTCCCCTTACCTTCCGAGCTCGGTGGTCTCCCTCGTCTTCAAGAACTCCGGCTGGCCGGCTCCGGCTACTCGGGACAGATACCCGCGGCGTTTGGTCAGCTGGCGAGCTTGACGACGCTGTCACTCGAAGACAACAACCTCACCGGAGAAATCCCTCCGGTGCTGACCAGGCTGACAAGGATGTATCACCTGAACCTGAGCAACAATGGGCTGGGCGGCGCCGTGCCTTTCGACGGCGCGTTCTTGCGGCGGCTCGGCCAGAACCTCGACCTGAGCGGCAACGCGGGGCTGTGCCTGGATGACCGGATGGTCGTGCGGGGCGTCGGCGTCGGCGTCGGCGCCTGCCACGCCGGCGGCGGCGGTGATGGCTCGTTGGCGCCCGGAGGAGTTACGGGGGCAGCAGCAACGGTGAGGGGTTCCGTGGACGGTTACCCGTTTCGGCTTCTCGACCATGCCTGCTTGGTCGTGGCCTGTCTGGTTTCTTTGAATTAG
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| Protein seq | MAASVAVFVCLLSVAAAAASMDPAEREVLFLVMEAVSSDRDWRSESPDPCGAPWPGLECKPAAGDAAAALLRVTRLDFGVEPNPSCKDTAAFPPLVFSSLPHLQSLFFVGCFKNPAANTSLVLPPAANLSTSSLQQLSIRANPSLSGVMPPQLATLRSLQVLTISQNGLIRGEIPQGIGELTSLVHLDLSYNSLTGPVPSEISELKSLVGLDLSYNSLSGAIPSRIGELRQLQKLDLSSNNLTGGIPVSIANLSSLTFLALSSNGLSGHFPPGLSGLRNLQYLIMDNNPMNVPLPSELGGLPRLQELRLAGSGYSGQIPAAFGQLASLTTLSLEDNNLTGEIPPVLTRLTRMYHLNLSNNGLGGAVPFDGAFLRRLGQNLDLSGNAGLCLDDRMVVRGVGVGVGACHAGGGGDGSLAPGGVTGAAATVRGSVDGYPFRLLDHACLVVACLVSLN
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.474389 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0729400 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g52880 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0729400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0032390 | RBH | 0.0 | 0.0 | 0.464620 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0031890 | RBH | 0.0 | 0.0 | 1.013861 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0032360 | RBH | 0.0 | 0.0 | 1.455159 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0031610 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0031320 | RBH | 0.0 | 0.0 | 0.828392 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0505300 | RBH | 0.4441015 | 0.2742005 | 3.276715 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0031030 | RBH | 0.0 | 0.0 | 0.269074 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0497400 | RBH | 0.7749535 | 0.4732795 | 30.900671 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0031270 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0031320 | RBH | 0.0 | 4.382456 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0031500 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0031690 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0031450 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G023790 | RBH | 0.0 | 0.0 | 0.210714 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0031540 | RBH | 0.0 | 0.0 | 0.0 |
