Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsN22_01G027290 | OGI:01081830 | 16/16 | N22 | OsN22RS2 | Gramene(+IsoSeq) | Chr01:26488113-26493560 | ||||||||
| Gene Symbol | OSBZ8, OsBZ8, OsbZIP05, OsGBF1, GBF1, OsGBF1a, OsGBF1b | ||||||||||
| DNA seq | TAGGAGAGAAAAATGGATCATCCAAAAGCAGGTAAAGGTAAAAGATCAAAGTTAGAAGGCTTTCTGTCAGTGTTACAGTATTTACAGAGATCAGTTTGATATGAACAACGCGAGCCAGCACTGATGTTACAGATCTACGAGAGTAGAGTAAAAACTCAGGGAAGAACTGACGGCCAGGGGGGCATTCATATCCCGGTGGAGCGGTTGGAATGCTCGTCTAAAAGGCAGCTACTAGTAATTTACAAGGGCGAATACAGTGACAAAATCGTACCTAATACTTCGATGTTAATCGTGCGGGCAGGTTGAGCTTATAAAATTCACCAGGCCACATGCTGCGTTTGAGCACGAACGGCGGGAGGGTCAAGTCGTTAAGATTACCTTGCGGCTACAGCATCAGTCGCCAGACCAGAGCCCAGGAGTTGACGAAGCTTGGGCGTGGCAATGGCATGATCCATGTGCCCGCTGCTTCTCGGCGTGCCAGTCTTGTCTATCATTGACAGGAAATTTTCGACGCCTCGAGCTTGCTGTGCTTTTGTTTTGACTGGAGGCACTTCTTGTGCTTCATCAGGCCCGGTTTCCGTTAGTTTCTCCTGTTAAACAAGGCGCATTTGAGAGAAGAAAAAAAAGGACTAGTGCTCAATGAAAATAGCTCCAATACTCCAATGATCATATTGTTAGAAAAGATGTTTACCATTAGAGCAGAATTCTCTAATCTAAGTTTCTTGGAGCTTTCCGTTAGCCTGCTTATTTCACGTCTAAGGGATGTGTTCTCCGCAGTCAATAGCTCAACTTTTCTAGCCAGTTCCTCAGTCTCGGCCTGTTAGAATGAAAGAATATCATTATTGTACAAGTATGGTTTAAATTTCTACTAGAGTATGGAATACTGAAGGGGATACCACAAAACATTACAAGTTAAAACTAGCTAAGCATCTTATTATACCTGCTTCCTCAACCTTGACCTCCGAGCAGACTCCCTGTTTGATTGCTTCCTTCTCTCGCGCTTCGATTCCTTATCATCCTGACAATTTATTAAGGATTATAGGTCTATAGTTTAATTCAAGAAGAAACGATCCCATGAATCGAAAGCTGAAAATTCCTGATCTCAAGAGTGAATCTCATTTTTTATTGAGTATCTAGGTACTTTGCATTTAGGTGTCCTGACAGTGGTGTTTGGTGAGGTGTTTTGTTGCTATCTCAGGGTGTCCTTCTGGGACGGGTCTTGTTCTGTTTCTCTCTGGAATGAATGTGTAGTTCTTTTTTAAAAGAAAAAGAATGCAAAGAGCTCCAGCAATCTATTTAGCAAAACCATACTAGCGACTCGAGAATTAATCCCAAAAAATAACAGCAGTAATAAATAAGGGATGTTGTATTCTCAAAAAAAAAAGGATGTTCTACTGAAGTCGTGGTAGTGGAAACATTAAGAAATTTGATTGCTTCGTCCAAGTATGGATCATGGTTCACTCCACGAAGTTAGTGGCGCCTTTTCTAAATGATAATTTGCTGGCACTTTAACAAGAAAAAAAACTGCAACTGGCATACCTTAGTTGGCACTTCAGTTACTGGGGTGGCAATAACTCTGAAGTCACTAGCAGTGCTCACGTCTGGTTTGATTGCTGTAACCGGAATGCATAGATTTGGCAAAGCTGCTTGTTCGCTAGGTCTATCATTAGGTGTTAAAGCTCCACCAGTTTCCACGCCTGGAGAAAAGGAAAAACAAAAACCAAATCACCTCTTAGTGTTGCTTAGTGCTCAGAATATATGGCCTTCTTATCATCTGAAAACTTAAACAGAGGATTATATTATGTTTCAGTTATCAATTAGAGAAATAACAAGAAATGCCGCAAAATTCACGATGAGTCATTGAACTGGATATTATAAAAATCAAGTACCAGATGATACCAAGATTGAGTACCTGATTTAGGCCTATCATCTATGCTCCTTTTCTTGGGAGTTCCACTTGCCTGAATAATGATGAAATATATCAGCATGTTAAGTATAAGCTTGCTGGCTCAGAACATCTTCAATGGCATTAAATAACTACAGAACAATACCTTCTGGTTGTTTCCATCACTGGATCCTTCTAAGCTGCAATCTCCACTGCATTGGCAGCATCAGATGCACATGAAATCAGTTTGTCACTCATAATAGTTGTATATAAGTTGAACTATCAATCTGGTTATCGTTTTCATTTTGTAAAATCCTGTATCACCTTGTTTTTTCACTGTTGCCACTGCCAGTTGACACAGCCGCACCATCAATTTCCTTCATTTTCTTATTTGAACAGTTATCCTTGCTGTTGACAGACTTTGCTGGCTCCATGCTCAATGGGCTCACCATCTTGATAAAAAATATAAGATAAACAATCAATAACAGAAGCATAATTAAGATACTAGCAAAACGATTAGCAATTCAGCACAGAACGTTCACACAAGTGAAGCAAGAAAGACATTAAAGAAAAGAACAATTGAACAAATGATTTAAAAATACATATATACTTCCACAGAAGAAAAAAAAATAAAAAATCCAGCTTCCTTCTACAGAAAAAATGGCAATATATGAATGAATTTATTTTCATGTAGAGATAATTCGTCTGCAAGGATAGGTTTTCCAAGTTCCAACTACATATCATGAATACTTCGAACGGCAGAAATCATTCGTGTTAGTTCTGCTCATAGAGAAGTTTCCATGTTAACATGGCTTTATGCAAGCATTTTAACAAATTGGATATCGCTTTAATTCCAAAGCGTGATAGTTGACTCAAATCCATGGTGCCTTCCATGTTTAGTTAAATGCAATGTTCTGAAAAATAGATAGGTGAACAAAATGAAATGCTTACTAGGGGCATGAACGGATGTGAAAAAGCTCCACCAGGAGGATAAATTGCGGCATATGGCTTCCCAAAAGCGGATGGCACCAGAGGCTGTAGAGGCACAGGGAAATAACTTAGAACTCTTAAAGATAAGAATGACACCTGATACATGGAGAGTAAAGTCAAAAACCTGAGGACCCAAGATAAATGGAGGAGGGGTATGACCAGCGGCTATTCCAGGGCTAAAAAATGTTGGTGGCAAGATCCCTGGGCCGTAATATGCCTGTGTTGATTATGATACCTTAAATTTAGTTACTCAGTTCAAAGGAAAATCCAAACTTCAGTTATCAGGAAAATATAGATTGTCAGACACCTAACCTGCATATTTGACCAATCAAGGTATGGACTAAGGGCTGGATGATCCTGCAAAGTAATACAGTTGCTACTTAGGCACCTTTAAGGATTCCACCCCTTGTCAATAATGTGGCTAATTGACAAAATCATGCTTCACAGCTGTTTGATGCAGCCCTAGCACATCTAAAACCTCAAAGCGGATTTATGTTGTCAAATAAAAGAAGAAATGCCAATAATCAATTTGACATCTTGCTCGTGCAATGTTGTCTGTGCCCATATTTGGCCTTGGTTATCTACTTATATGCGTTTACCTTAGGGGGCGATGGTGCTTTCCCCATCTTCTGAGTAACTACAGCTTCGTCATTTCCCATGACTTTTTATGAGTTCCTGCATATTTTCATCGTACAGATTGGTCATATGCTAAACCATATCATAAGTACTGAAAATAGTCACACAAAAAAGTATGTTTCAGTAAAAAATATAATTCACTAAATGCGCAGATATGAAACTCTTGCAGGCCCATAGATATCGCACAATCATGTACAAAAACCACTAGACACACCTAGCTTGTGCAGGCATTCCTGTACAGCAATCCGACACTTAAAATTCCTCCTTTCCAGTGAGCCATCACGGCGTCACTGCTTCATCGTCTTACTCATCTCTAGTCTCTCCTACGCCATCCTCCTTCTTCGCCTCTAGCGGGATTGGGTGACATAGGGTAGACATGTCACAAGGTGACATAGGGTGAATCTTGGCCCTCCAAAACAAATCCAACGGCTGAGATTCGTCCACGTCATCACGAGTAAAAATTTTACTCGCAGATTTACTCAGGAGTAAAAATTTTACTAGGAGTAAAATTCCTGGAGTAAAAGTTTTACTGGGAATAAAATTTTTACTCATGATGACGTGGACGAATCTAAGCTGTTGGATTTGTTTTGGAGGGTCGAGATTCACCCTATGTCACCCAATCTGAATCCCTACTCCCCCTCCCCCCACAACCCACTCCCAACACCAACACCACCGTATACACCCCCTTGCCAACCCCCGCCTACCACCAGCGTAGGGCGCCACCTCTCCACACCAACCCACACTAATATACATTGTTGTGAGAGATTAGTGTGCCGGAGAAAGAACCGGAGTACCAATCCCTGCAACAAATTGGAGGGATGGAAATTCAAGCCCTCTAGCAATTTTCAAAAATATATAGTACAGAAATAAACTGGCCGTAGCTATGTTCAGTCATTTGACATGGTCCAGAAGTGCTTCACCATCCTCACATAAAAATCTAGTCGTGCTTTCAATACTGATAACAAGAGTACAGCACACTATCTCCAAGAAAATTAAATTAATCTAAGATTACGACAGCCACCATCCCCCCCCCCCCCCCCCAAAGCACTCCACAAACCGGACAGGATTAACCAGTTGAAAGCAATTCCAACCAAAAGCTGACTAGACTAGGTGAAAGCTCCGGTATCCAACGTATGCACAAGGCCAAGTGACACCTGACTACCTGAGACTGAGATGACAAGGGCAGCCAGGGCGGGCACCAATTTTACAGTCTTCCAAACCGCACAAACCAGGGGTCCTATGGAGCGCAATAATTTTACACGTAACAGTCCACTTGTTACCTAACAAATAGTGAAACCGGGAAAATCGGCGTTCCAATTACTCAACTCTCACCTTTTCCCATAAAATAATTTCATTTCTGTTTGAAATAACGAAAAATATACTAGTAGTAAACTTAAGAAACGTGTACACGCTTCCTACGTGTGGCCATAGGATTCGCTTTTAAACCCGACAGGAAGCAAAAGAAAGCCGAACCAATGCATTTGAATCACTGCTACTACGACAGTTTTGTTTTTTTTTTTTGGAGGTGAATTGCTACTACGACGACAGTAGAAGTATGATAATATACTCGCTACAAGATCGAACAGAGGATCTTCCGGAGTCCGGACGAAACGCGTTAAAATTTCAGGGACGAACGAGGGAGGGCTTGGGCTTCCTGGCTCCTGCTCTCCGCTACTACAAACCTTCACCCTCGCGGCGAAGTGCTAAAACGAAAGAGAAGACGAACCAGGGGCCGGGCATTGCGCGTGAACACGGAGAGGGAGGCAGAGATCGGCCGCGCCGCGCGTACCTTGGATGGATCGACGCCCGCGTACGGTGCAGATCGGTGCGGCGGCGCAGGAGCACGAAGCCGACGGCGCGAGCGTGGAGGTGGTGGGTACTGAGGCTGAGGCGCGCTTCCTTTCTCGTCTGCGTGCGGCGGGGTGCTTTGATTTGAC
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| CDS seq | ATGGGAAATGACGAAGCTGTAGTTACTCAGAAGATGGGGAAAGCACCATCGCCCCCTAAGGATCATCCAGCCCTTAGTCCATACCTTGATTGGTCAAATATGCAGGCATATTACGGCCCAGGGATCTTGCCACCAACATTTTTTAGCCCTGGAATAGCCGCTGGTCATACCCCTCCTCCATTTATCTTGGGTCCTCAGCCTCTGGTGCCATCCGCTTTTGGGAAGCCATATGCCGCAATTTATCCTCCTGGTGGAGCTTTTTCACATCCGTTCATGCCCCTAATGGTGAGCCCATTGAGCATGGAGCCAGCAAAGTCTGTCAACAGCAAGGATAACTGTTCAAATAAGAAAATGAAGGAAATTGATGGTGCGGCTGTGTCAACTGGCAGTGGCAACAGTGAAAAAACAAGTGGAGATTGCAGCTTAGAAGGATCCAGTGATGGAAACAACCAGAAGGCAAGTGGAACTCCCAAGAAAAGGAGCATAGATGATAGGCCTAAATCAGGCGTGGAAACTGGTGGAGCTTTAACACCTAATGATAGACCTAGCGAACAAGCAGCTTTGCCAAATCTATGCATTCCGGTTACAGCAATCAAACCAGACGTGAGCACTGCTAGTGACTTCAGAGTTATTGCCACCCCAGTAACTGAAGTGCCAACTAAGGATGATAAGGAATCGAAGCGCGAGAGAAGGAAGCAATCAAACAGGGAGTCTGCTCGGAGGTCAAGGTTGAGGAAGCAGGCCGAGACTGAGGAACTGGCTAGAAAAGTTGAGCTATTGACTGCGGAGAACACATCCCTTAGACGTGAAATAAGCAGGCTAACGGAAAGCTCCAAGAAACTTAGATTAGAGAATTCTGCTCTAATGGAGAAACTAACGGAAACCGGGCCTGATGAAGCACAAGAAGTGCCTCCAGTCAAAACAAAAGCACAGCAAGCTCGAGGCGTCGAAAATTTCCTGTCAATGATAGACAAGACTGGCACGCCGAGAAGCAGCGGGCACATGGATCATGCCATTGCCACGCCCAAGCTTCGTCAACTCCTGGGCTCTGGTCTGGCGACTGATGCTGTAGCCGCAAGGTAA
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| Protein seq | MGNDEAVVTQKMGKAPSPPKDHPALSPYLDWSNMQAYYGPGILPPTFFSPGIAAGHTPPPFILGPQPLVPSAFGKPYAAIYPPGGAFSHPFMPLMVSPLSMEPAKSVNSKDNCSNKKMKEIDGAAVSTGSGNSEKTSGDCSLEGSSDGNNQKASGTPKKRSIDDRPKSGVETGGALTPNDRPSEQAALPNLCIPVTAIKPDVSTASDFRVIATPVTEVPTKDDKESKRERRKQSNRESARRSRLRKQAETEELARKVELLTAENTSLRREISRLTESSKKLRLENSALMEKLTETGPDEAQEVPPVKTKAQQARGVENFLSMIDKTGTPRSSGHMDHAIATPKLRQLLGSGLATDAVAAR |
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| Function | Common plant regulatory factor 1 [UniProtKB/Swiss-Prot:Q99089] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_01G027290 | OsN22_01G027290_01 | Chr01 | 26488113 | 26493560 | - | NAM | ||
| CDS seq | ATGGGAAATGACGAAGCTGTAGTTACTCAGAAGATGGGGAAAGCACCATCGCCCCCTAAGGATCATCCAGCCCTTAGTCCATACCTTGATTGGTCAAATATGCAGGCATATTACGGCCCAGGGATCTTGCCACCAACATTTTTTAGCCCTGGAATAGCCGCTGGTCATACCCCTCCTCCATTTATCTTGGGTCCTCAGCCTCTGGTGCCATCCGCTTTTGGGAAGCCATATGCCGCAATTTATCCTCCTGGTGGAGCTTTTTCACATCCGTTCATGCCCCTAATGGTGAGCCCATTGAGCATGGAGCCAGCAAAGTCTGTCAACAGCAAGGATAACTGTTCAAATAAGAAAATGAAGGAAATTGATGGTGCGGCTGTGTCAACTGGCAGTGGCAACAGTGAAAAAACAAGTGGAGATTGCAGCTTAGAAGGATCCAGTGATGGAAACAACCAGAAGGCAAGTGGAACTCCCAAGAAAAGGAGCATAGATGATAGGCCTAAATCAGGCGTGGAAACTGGTGGAGCTTTAACACCTAATGATAGACCTAGCGAACAAGCAGCTTTGCCAAATCTATGCATTCCGGTTACAGCAATCAAACCAGACGTGAGCACTGCTAGTGACTTCAGAGTTATTGCCACCCCAGTAACTGAAGTGCCAACTAAGGATGATAAGGAATCGAAGCGCGAGAGAAGGAAGCAATCAAACAGGGAGTCTGCTCGGAGGTCAAGGTTGAGGAAGCAGGCCGAGACTGAGGAACTGGCTAGAAAAGTTGAGCTATTGACTGCGGAGAACACATCCCTTAGACGTGAAATAAGCAGGCTAACGGAAAGCTCCAAGAAACTTAGATTAGAGAATTCTGCTCTAATGGAGAAACTAACGGAAACCGGGCCTGATGAAGCACAAGAAGTGCCTCCAGTCAAAACAAAAGCACAGCAAGCTCGAGGCGTCGAAAATTTCCTGTCAATGATAGACAAGACTGGCACGCCGAGAAGCAGCGGGCACATGGATCATGCCATTGCCACGCCCAAGCTTCGTCAACTCCTGGGCTCTGGTCTGGCGACTGATGCTGTAGCCGCAAGGTAA
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| Protein seq | MGNDEAVVTQKMGKAPSPPKDHPALSPYLDWSNMQAYYGPGILPPTFFSPGIAAGHTPPPFILGPQPLVPSAFGKPYAAIYPPGGAFSHPFMPLMVSPLSMEPAKSVNSKDNCSNKKMKEIDGAAVSTGSGNSEKTSGDCSLEGSSDGNNQKASGTPKKRSIDDRPKSGVETGGALTPNDRPSEQAALPNLCIPVTAIKPDVSTASDFRVIATPVTEVPTKDDKESKRERRKQSNRESARRSRLRKQAETEELARKVELLTAENTSLRREISRLTESSKKLRLENSALMEKLTETGPDEAQEVPPVKTKAQQARGVENFLSMIDKTGTPRSSGHMDHAIATPKLRQLLGSGLATDAVAAR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.193441 | 0.000000 | 1.637429 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0658900 | RBH | 0.983506 | 0.917042 | 1.912981 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g46970 | RBH | 0.661365 | 0.603094 | 0.493279 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0658900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0027890 | RBH | 0.115256 | 12.570105 | 1.933665 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0027400 | RBH | 0.000000 | 1.656357 | 0.505022 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0027850 | RBH | 0.516172 | 3.037634 | 3.939946 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0027090 | RBH | 0.029832 | 0.054854 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0026820 | RBH | 2.471479 | 0.0 | 9.863310 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0447900 | RBH | 1.099548 | 9.2872645 | 68.874416 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0026520 | RBH | 0.0 | 0.207057 | 0.750232 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0436800 | RBH | 4.111291 | 6.917571 | 15.216458 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0026770 | RBH | 0.0 | 0.221747 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0026690 | RBH | 0.337571 | 21.482113 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0027020 | RBH | 1.669800 | 4.643648 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0027090 | RBH | 0.308072 | 0.932425 | 1.207144 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0026900 | RBH | 0.145671 | 2.969605 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G026700 | RBH | 0.087199 | 2.868140 | 3.663471 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0027030 | RBH | 0.000000 | 18.031475 | 2.760735 |
