Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsN22_01G006670 | OGI:01017090 | 16/16 | N22 | OsN22RS2 | Gramene(+IsoSeq) | Chr01:5044686-5051757 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CTCGCAAGTTGCTGATGCAGCAGCATCATCCACTGGGTTAGAGGTATGGAAGAACAGAAGCAATTCTGTCAGATTTACATGGCAGTTTCTTCTGAAACAAGTGGAATCAGCCAGAAGCTGCAACTAGCCAGAAAAAAAGAAGCTTATCATCTTCATTGCAACAAATGCATTTCTAAATGTAGTCTGAATCTATACATCAACAGTTCCTACCAAACAACTAATCATAACTCAAACCAAAAAGAAAACAAAGAAAATCACAAATGAACTCAAACTGACAAGCTGAAAAAGAGACGACATCACAAATCCAAATGCAGACAAACCTAGTATGGAACCAAATCTGAGCTCATCTCATTAAATCCTTGAATACTCCACAGCTCAAGCTCTGCCCTGCTACTATCCTGATTTCTGAACTATACAGCCTTTTATCTCCACATGAGTAATGTACAGAAACTAGGCCTGAAAACTCTCTATTTCCATTCAACTGAATATTTATCTTCGCAAGATTGAAAAGGGAACAGAAAAAAACCTCACCTATTACTACACTGCGAGCGCGTCTCAAAATCTGGTGAGGCACCATGCTCACTCATACTCCCTCTTGATAGGCTTCGCAATCTCTGCCAGAACTTTCTGTTCTTGCCTGTCATCAGTGGACCTGAGCTGGACTGCTTTCGGAAAGAACCTGAATCCGCAGCGGGAGTGAAGACAGGGGTTGAGCCAAACATCTCAGATAACAGCACCCTCTCAGCTTCCATGCCAGTTACATCATAGATTGCTGCAGCTTGTGCCGCCAATTCCTGGCTGAAACTTCCTGATCCGAGGCCCTCATCACCGTCACTGCAAACAAGTTTTAAGGCCTGCACTACTTCACCCATGCTCGGGCGATGCGCAACCTCAGGTTGTACACACATTGATGCGATGGCAGCTGCTTTTGCGACATTGTCCAGGGGTACGTTAGGGCCAAGAAGTGGATCAACAGCTTGACGTAGGCTTACCACATTGGTCAGAAGCGGGCGAGCCCATGAAACTAGGTTTTCTTGCCCCCCGGGCCTAGACATGTCCACTGGCTTTCTACCGGTGAGGAGCTCAAGCAACACTACTCCATAGCTGTACACATCGCTCTTGACAAGGAGATGTCCTGTCATGGCATACTCCGGTGCAACATATCTGAGAAGAAAGACATAGTCATATTATGCATTAGAAATTGTGATTCCATCAGAACACAGAGGGATGAGGGATATGATTCATACCCAAATGTTCCCATGACACGAGTGGAGATGTGCTGGTTCCCCTCCCCCCTTGCAGTCCTGGCCAGTCCGAAATCAGACACTTTCGGTGTGAAATCATGCTCCAATAGGATGTTGCTTGACTTAAAATCACGATGAATCACACAAGGGCTTGAATCTTCGTGTAAATATGCAAGAGCTCGTGCAGCCCCCAAGGCTATCTTCATGCGGGCATTCCAATCGAGTGGTGCTGTCTCAAGATCCACTCCTACAAAAGTCAAAGGCAGATCTTTCAGTCAATTGCTTAAACTTTACAGGCTGGTGGCCTTAATTCTTCAAGTACTTACCATGCAAATGGGATTCTACACTGCCATTCGGAATAAGTTCATAAACCAGACATCTTGCGTTCTCCTCTACACATATGCCTAACAACTTGACCAAATTTCGGTGATGCAAGCGTCCCAGCATCTCAACCTCAGCCAAGAACTCTCTCTCGCCTTGGCCATCATACCTCTTCAGAACCTTTACTGCAACCCTGGTTCCATCTTCAAGCGTGCCCTGGTAGACACATCCAAAGCCACCCTCTCCAAGTACTGTTGAATCATCAAAGCTGTTTGTGGCCTTCTCAATCTCAGCAAATTTGAATGTCTTTGCCTGTCCTGCATATGTTGCGATACTTGAGCCCAATGAACCTGATGGACCTGATGGTGAACTATAGCGACCAGCTAACAGTGTTTGACCTGTACCTGCAATAATTCAACATGTTTCAGGAGGGAAACCAGTACTGTCATGACAGGGTAACGATACGATAAGTGGAAATTATAGAAAAGGCATTATCTGAAAAGTCATTGCAACTTGCAAATACTGTTCATCACCATTTTAAATAAGCATTTTTTTTTTGTCCCAGGCATATGCTTGAACTTTTTAAAAACTAGTAAGCCCATAAACCCTATTAGAGTGATTCACACTCTCTCAACGAGGACGGACGGCTAACAGCGAAACTAGCTCTTGCTAGATGGGAGCATCTGATTCCAGTGGCAATGGCTAAACCTAGATCAGTTAAAGATGAAACCAGGACTTTGATAGCTCATTTAAATGCCGTACCTATAGAACAGATAGGAAAAAAAAACAGAGATTATGAGGTCCCAATGATGACTGAAAAAGCACACTAATGCTGTTCTGCTGTATGAGGAAATATGCTGGATGAGTACACATACCAGATGATCTGGAAAATTTTGGAAGTGCGCTATGTGGAAATCTTTGAGCCAAGCCATCCGAACCCCTGAATCTGATTATCAGCAACCATGCAGCTAGAGTGCAAATAATCAATGCTATAACAGTAGACAAGACGGCAATAGCAATTAGGCTGCCGTTGACTCTTTTTTTGGGCCTGCCTACATCAACCCCGAGAGGCTTCATTGCCCTTGCATTTCTGTTGTTTCCAAATGCCCCGTCACCAACACTTTCCGGTGCTGAAGGTGGAGAAGGAGGAAGCCCTGCACAAAATCCATATCTTTGGTGAAAACTTGTGGTGCAGAAATTCAGCATGTTCAACAATGAGAAAGTGCAAGATGGAATAAGTTTATGTCTGACATTGCTGTTGTTTATGAGATCAACCAGATGACTATAATAAATTGATAGCAGTTGGTGGCATTGACCAGTGACAAAACCAAATAGAGAAGGCACATCAAAAGCACAAGCAAGAATACACACCTGGATATACAACATACAGAATCTCGTAGTCCCCAAAAACTGATGGTTTTAGGGAAATTTTTTTGCTCCATAAGTTTTCAAACGTTAAAAAAGCAGTAGCATTGTCAAACTTCACTTGCATTGGTACTAGGTCAACAAGAACTACTGTCTTGTCAGGCTGATCACCAGCTACATTTGCACCCATAACACGAACCTGTCTCTGTGCCATATTTACCCCAGATGACACTTCTTCCGCAAAATCAGATACCAATGGAAAGAATGAATACAGATCAACACTTAAGCGGACTCCAACTTTGATTGGTAGAACACAAACACATGGGGCTCCCGCAGGTGGATCTGTTAGAGGCTCTGGGCATGCTAATGAATTGCAATCTGCATTTATAAGGCTCATTAGATAATGAAACAATAAGAGCACATATATTATATCCATCTGTAAATCTTGAAAGGACATACTAGGTATGTGAACATGTAAATAAAGCATGCACCTAGATTAGGCGGTGGTGGAGGTAATGCCCAAATAGGATGGGCTGATGGTGCTTTCGGCCCTGGTTGGGGAGGGATTGGTGGCATGGTTGGAGAAATATGAGGCCCTGAAAAAGGCAGCATTTTTTTTCAAAATTCATCAGACAAGAGAAACATGGATATTTAACAGGGAGATAAATTAAGGCTTTGAGAGTACTTTTGTTTGAATGAGTGGGAGTCCTTGATGACACTGGTGCAGAAGATGGAGAATACGCAGGCAAGTTCGTATGGCCTGGGCAGGAGAATAATTAAGTTGTTAGTGCTATCAAATAAAATCAGGACCCATTTGGAATGGAATATTTTCCTTTTTCCCATGGGTACTCATAGGATAAGAACTAATTCTTGTGAAATCCATACAAATAGGGCATTAATTAACACAGAAACAGCCTATCAAATATGTTTAGACAGCAATGGCCTACATTACCTCGAAACATAGGTGGAGGTGCATGGTGCTTTTGCCTTTTAGCCCCAGACTGCCTTGGAGCCCGTGAGTTCTCAGGACCTATAATGCAAAACTTTTGAGAATCTAAATGACTCAATATAGACAATAACTAGGTTGTTGGTAGAAGAATTTTGTCAAACCTTGAGCATGAGATGGTGGATAAGATGGGGCAAATGGAAGGTGTTCTCCTTTCTTCGGTGCCCCACCCCGACCATGGTATCTGCTAGAAGTTGCTGGTTTAGGAGCAGCTACTGTTGAAGGGGGTCGGTCATGAGAAACTGATGATCCATTCTTTGGGACTGCTGGCATATTTGTGTTCTGGGGCAAAGGAGTTTCTGCAGGTGCTGATCCTGAGATGAGGAATTTTTGTAATCAAGCAACTTTGTCATATCCAAGCTACCACGGCCCGGCAACCCAATGAAATTTTCTGAGATTACCTCTAATTGGCGGTTTGTGAGCTGTGCCAGTTTGACTACTGGATTCCTTTGGTGGCAGTGCACGTGGAATATGACTATTCTTATGGGGAGGTGATGTATTTGCTGGGGGCACTGAGTTTCCTAAATATTTAAAAACAAAAACCTCCAAAAATTTAGAACAAAGGGACTTACAAAGCATCATCAGATCAATAGGATTGGATATGTTTATACTTCATTCTCACCATTGCTATGGTCACTACTTGGTGCCAGTGCTTGCTGACGTGGTGCTTGTGCAATAATAGGTGGTGCAACTGGAGGTTTTACACTTTCTCGCGGAACTCCTATTGAAGAAATGGAAAAACACAAGCATACACAACATGATTATTTTGATTGACCTCAAAGCAAATAGTTTAGTTTACCTGAAGTGGAAGGAGGAATGGCAGGTAAACTTCTTTGAGGTGGTGGATACGGAGGGACGCCATTCCCTAGAGAAATAAATTTATCAGGTGAATATTTGCATAATTGTAAGGAACCCTTTTGGACATGGACATGAAGAAGTCCAGGAACTTAAGGTTTTGAGTTGCCACTATCAGAATATATACTTATACGCTGCCTCTCAGAAAAAAAAAAACAGAGAAAGAATATATACCTGATCCAATTGGTCCGCTTGGTGGATTGTTCACAGAAGGAGGTTGCACTATCGGTAGATTAGGATTCCTGGCCACAGATGGAGCAGGAGCCTGAACAGAAGGCAACAAAGCAGGTGTCCCAGGAAGCACTGGTGCAGGATTTTCAACTGCAGCTTGCGGGGGAGCTACTGGCGCCACATGAGTGGGAGCAGGAGGCGTAAGCTCAACTGGAGGAGGCGCATTATATTCTACATAAGACGTAGTTAGTGATACACTCATTAGAACTGATGCGACATCATGATCTAACCGCGGGACGAACTACCTTTAGGGGGTGTTACTGGAGTAGGCGCATTTTGTGGTCGAGTGGGAACAGCTGGGCTGACAGCGCCCTTCGCCACAGGAGGGCTTGCTGATGGAGCAGAGGGTGCTGAGACAAAGCAATTGTAAGGACAATTGTCAATGCTGGTTATGATCTTGAGAGCCATAATGCCACACCACATTAGAAATTCAGAGCAACCTGTTGGAAGAGTTACTGGACCGAGGGCGATTGTAGGTTCAGGAGGGCTAGAAGTTTGATCTTGAGCATCTGGCGAGTTAGCGACCACAGGAGAAGGACCCAGATCAGTACCTGCAGTGGAGTAAAGAACACAACAGGGTCATGGAATGTGCCACAAGTACGTACACTGATATCCAACTACTAAGCTCAAAATTGCACAAACAAGTTGGTAACCACCCTGTGAGTGTGGATTAGTACTAGAGGCAATTTGTCCATGTTGTTTTGCCGTATGAAATTAGCAACTAGGAAAACAAGAACAATGATAATGCAATGCAAGTGCACAGCACCAAAATTATCAGAAAAGAAAACAAGGTGTAGTATGCAACAAGTGGGGAAGATACACATTCAGCGAAGTTAAGCATTTCCCAGTAGACAAGCAAATGGGTGGAAAATAAAGCACATGTGATGGAATTTAAAGTGGCTAGTAATTAGCACGAGATGCCTAGCACACAGCCAACCAGATATGCCAAGCCACCGACATTGCACCATCCTTCTCAATGAGAAGAAGCCCATTCAATCCTAACAAAATTCACAACATCCTCTCCCAAATTTGCTCAAATTTTGAAGTAGGAAAAGGCAACTGCATTTTTTTTTCCCATTCACAGATCAATTAGGCAGCATGTGCATCACAGAATCCATCCATGAGCTCTCCTAACAAATCACACAGCATTCTTCTAAAAATTCTCCTAACAATTCAAACAGCATTCTAAATTAACCCAGAAAAAACCATGGAGAAACAACCAAATCTCCAGATTACTGGACCAGCATCCACAACCCCATCATATGATCCCAACCTGAAGAAGAAGAACTAAAAAAAAAAACAGGAGGCGCAAAAACAACCTGAAAACCATGGCGAATGCCCGGAGCTCGTCTCACCTGTAGATCCAAGAACCGAAGCGAGAAGAAGCACCGCGCAACAAGCGAGCGACCGCATCTCGCCCTTCCTCCCCTATTGCGCCTCACACCAAGAACAGCCAACTCAAGAACAGCCGCGCCAAAATGCGAGAGAATCACAGATCACAACCATCTCGGGTGGCGCGCGGCGCCGCTCCTCCTCCCGCAGGAAGGCGACGGGGCCTGACCGCCATTTTGGCACCACGCCATGAGCAGCCACACTCCCATGTGGGGAGGGAGAAGAAGAGGGCAATGAGGAGGCGGCAGAAGAGGGGTTAGCCAAGCAAAGCTTGTACTAGTACCACTAGTGGTTACTGGTTAGTACAGTACAGTACACCACAAGGCAGTGGACTAGTGGTAGCTAAGGAATAAATTAGTGAGAAATTAGCAACAGAAGAAGAGGAGATTAAGAAGAAGGAGAGAGCTTTGGGTCAAGATGCAAGAACCAGCACAGTAAACATTCCTTGCTTGCTGCCCCTGCACTCCTCCCTCCACCACTACCCAGATCATCATAAGCTGATGAAAGATGAAGGATTAACCAACTAATCAGGAAGAAAGAAAGAACAAAGCAGGAATCTTTGCTTGGGGCTAAGTAAACTATTCACCCCCAAGAAACACCCTCAGAGATGCAAGCTCGTCCTCTCTCTCATGCATCAGAGTGCCTGTCTGTCTGTCCC
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| CDS seq | ATGCGGTCGCTCGCTTGTTGCGCGGTGCTTCTTCTCGCTTCGGTTCTTGGATCTACAGGTACTGATCTGGGTCCTTCTCCTGTGGTCGCTAACTCGCCAGATGCTCAAGATCAAACTTCTAGCCCTCCTGAACCTACAATCGCCCTCGGTCCAGTAACTCTTCCAACAGCACCCTCTGCTCCATCAGCAAGCCCTCCTGTGGCGAAGGGCGCTGTCAGCCCAGCTGTTCCCACTCGACCACAAAATGCGCCTACTCCAGTAACACCCCCTAAAGAATATAATGCGCCTCCTCCAGTTGAGCTTACGCCTCCTGCTCCCACTCATGTGGCGCCAGTAGCTCCCCCGCAAGCTGCAGTTGAAAATCCTGCACCAGTGCTTCCTGGGACACCTGCTTTGTTGCCTTCTGTTCAGGCTCCTGCTCCATCTGTGGCCAGGAATCCTAATCTACCGATAGTGCAACCTCCTTCTGTGAACAATCCACCAAGCGGACCAATTGGATCAGGGAATGGCGTCCCTCCGTATCCACCACCTCAAAGAAGTTTACCTGCCATTCCTCCTTCCACTTCAGGAGTTCCGCGAGAAAGTGTAAAACCTCCAGTTGCACCACCTATTATTGCACAAGCACCACGTCAGCAAGCACTGGCACCAAGTAGTGACCATAGCAATGGAAACTCAGTGCCCCCAGCAAATACATCACCTCCCCATAAGAATAGTCATATTCCACGTGCACTGCCACCAAAGGAATCCAGTAGTCAAACTGGCACAGCTCACAAACCGCCAATTAGAGGATCAGCACCTGCAGAAACTCCTTTGCCCCAGAACACAAATATGCCAGCAGTCCCAAAGAATGGATCATCAGTTTCTCATGACCGACCCCCTTCAACAGTAGCTGCTCCTAAACCAGCAACTTCTAGCAGATACCATGGTCGGGGTGGGGCACCGAAGAAAGGAGAACACCTTCCATTTGCCCCATCTTATCCACCATCTCATGCTCAAGGTCCTGAGAACTCACGGGCTCCAAGGCAGTCTGGGGCTAAAAGGCAAAAGCACCATGCACCTCCACCTATGTTTCGAGGCCATACGAACTTGCCTGCGTATTCTCCATCTTCTGCACCAGTGTCATCAAGGACTCCCACTCATTCAAACAAAAGGCCTCATATTTCTCCAACCATGCCACCAATCCCTCCCCAACCAGGGCCGAAAGCACCATCAGCCCATCCTATTTGGGCATTACCTCCACCACCGCCTAATCTAGATTGCAATTCATTAGCATGCCCAGAGCCTCTAACAGATCCACCTGCGGGAGCCCCATGTGTTTGTGTTCTACCAATCAAAGTTGGAGTCCGCTTAAGTGTTGATCTGTATTCATTCTTTCCATTGGTATCTGATTTTGCGGAAGAAGTGTCATCTGGGGTAAATATGGCACAGAGACAGGTTCGTGTTATGGGTGCAAATGTAGCTGGTGATCAGCCTGACAAGACAGTAGTTCTTGTTGACCTAGTACCAATGCAAGTGAAGTTTGACAATGCTACTGCTTTTTTAACGTTTGAAAACTTATGGAGCAAAAAAATTTCCCTAAAACCATCAGTTTTTGGGGACTACGAGATTCTGTATGTTGTATATCCAGGGCTTCCTCCTTCTCCACCTTCAGCACCGGAAAGTGTTGGTGACGGGGCATTTGGAAACAACAGAAATGCAAGGGCAATGAAGCCTCTCGGGGTTGATGTAGGCAGGCCCAAAAAAAGAGTCAACGGCAGCCTAATTGCTATTGCCGTCTTGTCTACTGTTATAGCATTGATTATTTGCACTCTAGCTGCATGGTTGCTGATAATCAGATTCAGGGGTTCGGATGGCTTGGCTCAAAGATTTCCACATAGCGCACTTCCAAAATTTTCCAGATCATCTGGTACAGGTCAAACACTGTTAGCTGGTCGCTATAGTTCACCATCAGGTCCATCAGGTTCATTGGGCTCAAGTATCGCAACATATGCAGGACAGGCAAAGACATTCAAATTTGCTGAGATTGAGAAGGCCACAAACAGCTTTGATGATTCAACAGTACTTGGAGAGGGTGGCTTTGGATGTGTCTACCAGGGCACGCTTGAAGATGGAACCAGGGTTGCAGTAAAGGTTCTGAAGAGGTATGATGGCCAAGGCGAGAGAGAGTTCTTGGCTGAGGTTGAGATGCTGGGACGCTTGCATCACCGAAATTTGGTCAAGTTGTTAGGCATATGTGTAGAGGAGAACGCAAGATGTCTGGTTTATGAACTTATTCCGAATGGCAGTGTAGAATCCCATTTGCATGGAGTGGATCTTGAGACAGCACCACTCGATTGGAATGCCCGCATGAAGATAGCCTTGGGGGCTGCACGAGCTCTTGCATATTTACACGAAGATTCAAGCCCTTGTGTGATTCATCGTGATTTTAAGTCAAGCAACATCCTATTGGAGCATGATTTCACACCGAAAGTGTCTGATTTCGGACTGGCCAGGACTGCAAGGGGGGAGGGGAACCAGCACATCTCCACTCGTGTCATGGGAACATTTGGATATGTTGCACCGGAGTATGCCATGACAGGACATCTCCTTGTCAAGAGCGATGTGTACAGCTATGGAGTAGTGTTGCTTGAGCTCCTCACCGGTAGAAAGCCAGTGGACATGTCTAGGCCCGGGGGGCAAGAAAACCTAGTTTCATGGGCTCGCCCGCTTCTGACCAATGTGGTAAGCCTACGTCAAGCTGTTGATCCACTTCTTGGCCCTAACGTACCCCTGGACAATGTCGCAAAAGCAGCTGCCATCGCATCAATGTGTGTACAACCTGAGGTTGCGCATCGCCCGAGCATGGGTGAAGTAGTGCAGGCCTTAAAACTTGTTTGCAGTGACGGTGATGAGGGCCTCGGATCAGGAAGTTTCAGCCAGGAATTGGCGGCACAAGCTGCAGCAATCTATGATGTAACTGGCATGGAAGCTGAGAGGGTGCTGTTATCTGAGATGTTTGGCTCAACCCCTGTCTTCACTCCCGCTGCGGATTCAGGTTCTTTCCGAAAGCAGTCCAGCTCAGGTCCACTGATGACAGGCAAGAACAGAAAGTTCTGGCAGAGATTGCGAAGCCTATCAAGAGGGAGTATGAGTGAGCATGGTGCCTCACCAGATTTTGAGACGCGCTCGCAGTGTAGTAATAGGTGA
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| Protein seq | MRSLACCAVLLLASVLGSTGTDLGPSPVVANSPDAQDQTSSPPEPTIALGPVTLPTAPSAPSASPPVAKGAVSPAVPTRPQNAPTPVTPPKEYNAPPPVELTPPAPTHVAPVAPPQAAVENPAPVLPGTPALLPSVQAPAPSVARNPNLPIVQPPSVNNPPSGPIGSGNGVPPYPPPQRSLPAIPPSTSGVPRESVKPPVAPPIIAQAPRQQALAPSSDHSNGNSVPPANTSPPHKNSHIPRALPPKESSSQTGTAHKPPIRGSAPAETPLPQNTNMPAVPKNGSSVSHDRPPSTVAAPKPATSSRYHGRGGAPKKGEHLPFAPSYPPSHAQGPENSRAPRQSGAKRQKHHAPPPMFRGHTNLPAYSPSSAPVSSRTPTHSNKRPHISPTMPPIPPQPGPKAPSAHPIWALPPPPPNLDCNSLACPEPLTDPPAGAPCVCVLPIKVGVRLSVDLYSFFPLVSDFAEEVSSGVNMAQRQVRVMGANVAGDQPDKTVVLVDLVPMQVKFDNATAFLTFENLWSKKISLKPSVFGDYEILYVVYPGLPPSPPSAPESVGDGAFGNNRNARAMKPLGVDVGRPKKRVNGSLIAIAVLSTVIALIICTLAAWLLIIRFRGSDGLAQRFPHSALPKFSRSSGTGQTLLAGRYSSPSGPSGSLGSSIATYAGQAKTFKFAEIEKATNSFDDSTVLGEGGFGCVYQGTLEDGTRVAVKVLKRYDGQGEREFLAEVEMLGRLHHRNLVKLLGICVEENARCLVYELIPNGSVESHLHGVDLETAPLDWNARMKIALGAARALAYLHEDSSPCVIHRDFKSSNILLEHDFTPKVSDFGLARTARGEGNQHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSRPGGQENLVSWARPLLTNVVSLRQAVDPLLGPNVPLDNVAKAAAIASMCVQPEVAHRPSMGEVVQALKLVCSDGDEGLGSGSFSQELAAQAAAIYDVTGMEAERVLLSEMFGSTPVFTPAADSGSFRKQSSSGPLMTGKNRKFWQRLRSLSRGSMSEHGASPDFETRSQCSNR |
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| Function | Receptor-like serine/threonine-protein kinase ALE2 [UniProtKB/Swiss-Prot:Q8RWW0] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_01G006670 | OsN22_01G006670_01 | Chr01 | 5044686 | 5051757 | - | NAM | ||
| CDS seq | ATGCGGTCGCTCGCTTGTTGCGCGGTGCTTCTTCTCGCTTCGGTTCTTGGATCTACAGGTACTGATCTGGGTCCTTCTCCTGTGGTCGCTAACTCGCCAGATGCTCAAGATCAAACTTCTAGCCCTCCTGAACCTACAATCGCCCTCGGTCCAGTAACTCTTCCAACAGCACCCTCTGCTCCATCAGCAAGCCCTCCTGTGGCGAAGGGCGCTGTCAGCCCAGCTGTTCCCACTCGACCACAAAATGCGCCTACTCCAGTAACACCCCCTAAAGAATATAATGCGCCTCCTCCAGTTGAGCTTACGCCTCCTGCTCCCACTCATGTGGCGCCAGTAGCTCCCCCGCAAGCTGCAGTTGAAAATCCTGCACCAGTGCTTCCTGGGACACCTGCTTTGTTGCCTTCTGTTCAGGCTCCTGCTCCATCTGTGGCCAGGAATCCTAATCTACCGATAGTGCAACCTCCTTCTGTGAACAATCCACCAAGCGGACCAATTGGATCAGGGAATGGCGTCCCTCCGTATCCACCACCTCAAAGAAGTTTACCTGCCATTCCTCCTTCCACTTCAGGAGTTCCGCGAGAAAGTGTAAAACCTCCAGTTGCACCACCTATTATTGCACAAGCACCACGTCAGCAAGCACTGGCACCAAGTAGTGACCATAGCAATGGAAACTCAGTGCCCCCAGCAAATACATCACCTCCCCATAAGAATAGTCATATTCCACGTGCACTGCCACCAAAGGAATCCAGTAGTCAAACTGGCACAGCTCACAAACCGCCAATTAGAGGATCAGCACCTGCAGAAACTCCTTTGCCCCAGAACACAAATATGCCAGCAGTCCCAAAGAATGGATCATCAGTTTCTCATGACCGACCCCCTTCAACAGTAGCTGCTCCTAAACCAGCAACTTCTAGCAGATACCATGGTCGGGGTGGGGCACCGAAGAAAGGAGAACACCTTCCATTTGCCCCATCTTATCCACCATCTCATGCTCAAGGTCCTGAGAACTCACGGGCTCCAAGGCAGTCTGGGGCTAAAAGGCAAAAGCACCATGCACCTCCACCTATGTTTCGAGGCCATACGAACTTGCCTGCGTATTCTCCATCTTCTGCACCAGTGTCATCAAGGACTCCCACTCATTCAAACAAAAGGCCTCATATTTCTCCAACCATGCCACCAATCCCTCCCCAACCAGGGCCGAAAGCACCATCAGCCCATCCTATTTGGGCATTACCTCCACCACCGCCTAATCTAGATTGCAATTCATTAGCATGCCCAGAGCCTCTAACAGATCCACCTGCGGGAGCCCCATGTGTTTGTGTTCTACCAATCAAAGTTGGAGTCCGCTTAAGTGTTGATCTGTATTCATTCTTTCCATTGGTATCTGATTTTGCGGAAGAAGTGTCATCTGGGGTAAATATGGCACAGAGACAGGTTCGTGTTATGGGTGCAAATGTAGCTGGTGATCAGCCTGACAAGACAGTAGTTCTTGTTGACCTAGTACCAATGCAAGTGAAGTTTGACAATGCTACTGCTTTTTTAACGTTTGAAAACTTATGGAGCAAAAAAATTTCCCTAAAACCATCAGTTTTTGGGGACTACGAGATTCTGTATGTTGTATATCCAGGGCTTCCTCCTTCTCCACCTTCAGCACCGGAAAGTGTTGGTGACGGGGCATTTGGAAACAACAGAAATGCAAGGGCAATGAAGCCTCTCGGGGTTGATGTAGGCAGGCCCAAAAAAAGAGTCAACGGCAGCCTAATTGCTATTGCCGTCTTGTCTACTGTTATAGCATTGATTATTTGCACTCTAGCTGCATGGTTGCTGATAATCAGATTCAGGGGTTCGGATGGCTTGGCTCAAAGATTTCCACATAGCGCACTTCCAAAATTTTCCAGATCATCTGGTACAGGTCAAACACTGTTAGCTGGTCGCTATAGTTCACCATCAGGTCCATCAGGTTCATTGGGCTCAAGTATCGCAACATATGCAGGACAGGCAAAGACATTCAAATTTGCTGAGATTGAGAAGGCCACAAACAGCTTTGATGATTCAACAGTACTTGGAGAGGGTGGCTTTGGATGTGTCTACCAGGGCACGCTTGAAGATGGAACCAGGGTTGCAGTAAAGGTTCTGAAGAGGTATGATGGCCAAGGCGAGAGAGAGTTCTTGGCTGAGGTTGAGATGCTGGGACGCTTGCATCACCGAAATTTGGTCAAGTTGTTAGGCATATGTGTAGAGGAGAACGCAAGATGTCTGGTTTATGAACTTATTCCGAATGGCAGTGTAGAATCCCATTTGCATGGAGTGGATCTTGAGACAGCACCACTCGATTGGAATGCCCGCATGAAGATAGCCTTGGGGGCTGCACGAGCTCTTGCATATTTACACGAAGATTCAAGCCCTTGTGTGATTCATCGTGATTTTAAGTCAAGCAACATCCTATTGGAGCATGATTTCACACCGAAAGTGTCTGATTTCGGACTGGCCAGGACTGCAAGGGGGGAGGGGAACCAGCACATCTCCACTCGTGTCATGGGAACATTTGGATATGTTGCACCGGAGTATGCCATGACAGGACATCTCCTTGTCAAGAGCGATGTGTACAGCTATGGAGTAGTGTTGCTTGAGCTCCTCACCGGTAGAAAGCCAGTGGACATGTCTAGGCCCGGGGGGCAAGAAAACCTAGTTTCATGGGCTCGCCCGCTTCTGACCAATGTGGTAAGCCTACGTCAAGCTGTTGATCCACTTCTTGGCCCTAACGTACCCCTGGACAATGTCGCAAAAGCAGCTGCCATCGCATCAATGTGTGTACAACCTGAGGTTGCGCATCGCCCGAGCATGGGTGAAGTAGTGCAGGCCTTAAAACTTGTTTGCAGTGACGGTGATGAGGGCCTCGGATCAGGAAGTTTCAGCCAGGAATTGGCGGCACAAGCTGCAGCAATCTATGATGTAACTGGCATGGAAGCTGAGAGGGTGCTGTTATCTGAGATGTTTGGCTCAACCCCTGTCTTCACTCCCGCTGCGGATTCAGGTTCTTTCCGAAAGCAGTCCAGCTCAGGTCCACTGATGACAGGCAAGAACAGAAAGTTCTGGCAGAGATTGCGAAGCCTATCAAGAGGGAGTATGAGTGAGCATGGTGCCTCACCAGATTTTGAGACGCGCTCGCAGTGTAGTAATAGGTGA
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| Protein seq | MRSLACCAVLLLASVLGSTGTDLGPSPVVANSPDAQDQTSSPPEPTIALGPVTLPTAPSAPSASPPVAKGAVSPAVPTRPQNAPTPVTPPKEYNAPPPVELTPPAPTHVAPVAPPQAAVENPAPVLPGTPALLPSVQAPAPSVARNPNLPIVQPPSVNNPPSGPIGSGNGVPPYPPPQRSLPAIPPSTSGVPRESVKPPVAPPIIAQAPRQQALAPSSDHSNGNSVPPANTSPPHKNSHIPRALPPKESSSQTGTAHKPPIRGSAPAETPLPQNTNMPAVPKNGSSVSHDRPPSTVAAPKPATSSRYHGRGGAPKKGEHLPFAPSYPPSHAQGPENSRAPRQSGAKRQKHHAPPPMFRGHTNLPAYSPSSAPVSSRTPTHSNKRPHISPTMPPIPPQPGPKAPSAHPIWALPPPPPNLDCNSLACPEPLTDPPAGAPCVCVLPIKVGVRLSVDLYSFFPLVSDFAEEVSSGVNMAQRQVRVMGANVAGDQPDKTVVLVDLVPMQVKFDNATAFLTFENLWSKKISLKPSVFGDYEILYVVYPGLPPSPPSAPESVGDGAFGNNRNARAMKPLGVDVGRPKKRVNGSLIAIAVLSTVIALIICTLAAWLLIIRFRGSDGLAQRFPHSALPKFSRSSGTGQTLLAGRYSSPSGPSGSLGSSIATYAGQAKTFKFAEIEKATNSFDDSTVLGEGGFGCVYQGTLEDGTRVAVKVLKRYDGQGEREFLAEVEMLGRLHHRNLVKLLGICVEENARCLVYELIPNGSVESHLHGVDLETAPLDWNARMKIALGAARALAYLHEDSSPCVIHRDFKSSNILLEHDFTPKVSDFGLARTARGEGNQHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSRPGGQENLVSWARPLLTNVVSLRQAVDPLLGPNVPLDNVAKAAAIASMCVQPEVAHRPSMGEVVQALKLVCSDGDEGLGSGSFSQELAAQAAAIYDVTGMEAERVLLSEMFGSTPVFTPAADSGSFRKQSSSGPLMTGKNRKFWQRLRSLSRGSMSEHGASPDFETRSQCSNR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 6.244658 | 8.752634 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0195200 | RBH | 0.160547 | 0.000000 | 4.506700 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g09860 | RBH | 0.109716 | 0.000000 | 1.059584 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0195200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0007080 | RBH | 0.043572 | 5.264100 | 10.418498 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0006720 | RBH | 0.0 | 2.912118 | 2.370479 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0007020 | RBH | 0.0 | 6.672543 | 15.324860 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0006540 | RBH | 0.0 | 0.492889 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0006700 | RBH | 0.242724 | 20.811306 | 13.419531 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0085200 | RBH | 4.932788 | 3.3133445 | 2.788549 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0006670 | RBH | 0.000000 | 1.068347 | 1.345943 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0086600 | RBH | 6.0543185 | 0.879716 | 29.2069005 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0006460 | RBH | 0.0 | 0.204972 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0006660 | RBH | 0.000000 | 9.803828 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0006700 | RBH | 0.000000 | 21.825846 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0006670 | RBH | 0.0 | 0.600662 | 0.865857 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0006620 | RBH | 0.054159 | 8.065298 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G006890 | RBH | 0.0 | 0.680112 | 1.174941 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0006550 | RBH | 0.0 | 7.864896 | 2.456676 |
