Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsN22_01G002750 OGI:01002250 | 16/16 N22 | OsN22RS2 | Gramene(+IsoSeq) Chr01:2073336-2074589
Gene Symbol RLCK21, OsRLCK21, -
DNA seq

ATGGCCCCTACTTGCTTTTTCGCCTTATACTGGTTACCGCTGATGCTCGCCGCGGCGGCGAGGGGAGCCGAGGAGGAAGGAGGAGGAGGCTGCCTGGGCAGCCAGAAATGCGGCCACCTGAATATCTCCTCTCCGTTCTGGATCACCCAGGGCCAGGCGGATAAGCCGTGTGGTCCTCTGGATTACCAGGTATATTGCAACTACTCCACCGGCGTCGCAACTCTTCGAAGCTCTACGGACACCGGGTTTGATATCATCAACATATCATATGGGGACCGTACTATGCTCGTCTTTGATGTCCATAAGCTAGCTCGCCTGAATAGCTCCACCGGCTGCAGTATCCCAGTGTTTAACACCTTCGCCAAGCTGCCCGTCACGTTTACAATCAGCCCTTCCAATCACAACCTCGTCTTCTACAACTGCACCAAGGCGCCGCCGGCGGAGCAGCAGCAAAAACTGGGGCTCGTGGAGACGAGATGCGGTAACAACACGTTTGCTCGGCTGGGAGGGCGTTACGACGGGGAGGGCGACTACGACAAGTACTATTTGGAAGGCTGCAGCAGAAACAGCACCGTCTTCTCGCCGGTGCTGAAGCCGCCTGATGGCAAGGCGAACGCCAGCAGGTATGTGGAGCTCGTGCGTGGAGGCTTCCTCATAACATGGGGGAACCTGCCACCGCCAGTGCCTCCACCGCCAGAGCTGCCAGTGACATCTTCTGGTAAGTTCACCCTCCCAGCCTCCCTGAAAGGCTGAAACTATTACTGAAACTATTACGAACACGTTTATTGGCATCTCTTCGATTCTTTCCTCCTGCCATTTCAAACAAGAAAACCACAGCGGTTGGAGACCAGCTAACCGGCCATGTCCTATAGACGAGCGAATAGATCAGTAACAAGTCACAATAAGAAGATGAGTTAGCTTCTTTAAGCACATGATATTAATTCATTATATACTCTATTCACAACCCCGTCCCTCTTCGCCCTTATCTCGGTTACCCTCAGAAGAACCGGCAGTTCAAGTTCCAGATCATCGACATCTTCTACAGCAACAGCTCCTTGCTTGTCACCGATGTCCGAAAGATGGACGACTTCGACAACTCCAGTGGCTGCCATGTCCCGAGGTCCAATACCTCCTCCAAGCTTCGGTTGGCCATTCTCGATTAGCCGTGTCAACCATAATCTTATCTTCTACAACTGCACCAAGCCTCCGACGGCGGCGGTGCGGCGTCTCCTCGGTCTCGTCGAGACGAAATGA

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CDS seq

ATGGCCCCTACTTGCTTTTTCGCCTTATACTGGTTACCGCTGATGCTCGCCGCGGCGGCGAGGGGAGCCGAGGAGGAAGGAGGAGGAGGCTGCCTGGGCAGCCAGAAATGCGGCCACCTGAATATCTCCTCTCCGTTCTGGATCACCCAGGGCCAGGCGGATAAGCCGTGTGGTCCTCTGGATTACCAGGTATATTGCAACTACTCCACCGGCGTCGCAACTCTTCGAAGCTCTACGGACACCGGGTTTGATATCATCAACATATCATATGGGGACCGTACTATGCTCGTCTTTGATGTCCATAAGCTAGCTCGCCTGAATAGCTCCACCGGCTGCAGTATCCCAGTGTTTAACACCTTCGCCAAGCTGCCCGTCACGTTTACAATCAGCCCTTCCAATCACAACCTCGTCTTCTACAACTGCACCAAGGCGCCGCCGGCGGAGCAGCAGCAAAAACTGGGGCTCGTGGAGACGAGATGCGGTAACAACACGTTTGCTCGGCTGGGAGGGCGTTACGACGGGGAGGGCGACTACGACAAGTACTATTTGGAAGGCTGCAGCAGAAACAGCACCGTCTTCTCGCCGGTGCTGAAGCCGCCTGATGGCAAGGCGAACGCCAGCAGGTATGTGGAGCTCGTGCGTGGAGGCTTCCTCATAACATGGGGGAACCTGCCACCGCCAGTGCCTCCACCGCCAGAGCTGCCAAAGAACCGGCAGTTCAAGTTCCAGATCATCGACATCTTCTACAGCAACAGCTCCTTGCTTGTCACCGATGTCCGAAAGATGGACGACTTCGACAACTCCAGTGGCTGCCATGTCCCGAGGTCCAATACCTCCTCCAAGCTTCGCCGTGTCAACCATAATCTTATCTTCTACAACTGCACCAAGCCTCCGACGGCGGCGGTGCGGCGTCTCCTCGGTCTCGTCGAGACGAAATGA

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Protein seq

MAPTCFFALYWLPLMLAAAARGAEEEGGGGCLGSQKCGHLNISSPFWITQGQADKPCGPLDYQVYCNYSTGVATLRSSTDTGFDIINISYGDRTMLVFDVHKLARLNSSTGCSIPVFNTFAKLPVTFTISPSNHNLVFYNCTKAPPAEQQQKLGLVETRCGNNTFARLGGRYDGEGDYDKYYLEGCSRNSTVFSPVLKPPDGKANASRYVELVRGGFLITWGNLPPPVPPPPELPKNRQFKFQIIDIFYSNSSLLVTDVRKMDDFDNSSGCHVPRSNTSSKLRRVNHNLIFYNCTKPPTAAVRRLLGLVETK

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsN22_01G002750 OsN22_01G002750_01 Chr01 2073336 2074589 + NAM
CDS seq

ATGGCCCCTACTTGCTTTTTCGCCTTATACTGGTTACCGCTGATGCTCGCCGCGGCGGCGAGGGGAGCCGAGGAGGAAGGAGGAGGAGGCTGCCTGGGCAGCCAGAAATGCGGCCACCTGAATATCTCCTCTCCGTTCTGGATCACCCAGGGCCAGGCGGATAAGCCGTGTGGTCCTCTGGATTACCAGGTATATTGCAACTACTCCACCGGCGTCGCAACTCTTCGAAGCTCTACGGACACCGGGTTTGATATCATCAACATATCATATGGGGACCGTACTATGCTCGTCTTTGATGTCCATAAGCTAGCTCGCCTGAATAGCTCCACCGGCTGCAGTATCCCAGTGTTTAACACCTTCGCCAAGCTGCCCGTCACGTTTACAATCAGCCCTTCCAATCACAACCTCGTCTTCTACAACTGCACCAAGGCGCCGCCGGCGGAGCAGCAGCAAAAACTGGGGCTCGTGGAGACGAGATGCGGTAACAACACGTTTGCTCGGCTGGGAGGGCGTTACGACGGGGAGGGCGACTACGACAAGTACTATTTGGAAGGCTGCAGCAGAAACAGCACCGTCTTCTCGCCGGTGCTGAAGCCGCCTGATGGCAAGGCGAACGCCAGCAGGTATGTGGAGCTCGTGCGTGGAGGCTTCCTCATAACATGGGGGAACCTGCCACCGCCAGTGCCTCCACCGCCAGAGCTGCCAAAGAACCGGCAGTTCAAGTTCCAGATCATCGACATCTTCTACAGCAACAGCTCCTTGCTTGTCACCGATGTCCGAAAGATGGACGACTTCGACAACTCCAGTGGCTGCCATGTCCCGAGGTCCAATACCTCCTCCAAGCTTCGCCGTGTCAACCATAATCTTATCTTCTACAACTGCACCAAGCCTCCGACGGCGGCGGTGCGGCGTCTCCTCGGTCTCGTCGAGACGAAATGA

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Protein seq

MAPTCFFALYWLPLMLAAAARGAEEEGGGGCLGSQKCGHLNISSPFWITQGQADKPCGPLDYQVYCNYSTGVATLRSSTDTGFDIINISYGDRTMLVFDVHKLARLNSSTGCSIPVFNTFAKLPVTFTISPSNHNLVFYNCTKAPPAEQQQKLGLVETRCGNNTFARLGGRYDGEGDYDKYYLEGCSRNSTVFSPVLKPPDGKANASRYVELVRGGFLITWGNLPPPVPPPPELPKNRQFKFQIIDIFYSNSSLLVTDVRKMDDFDNSSGCHVPRSNTSSKLRRVNHNLIFYNCTKPPTAAVRRLLGLVETK

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.000000 0.0 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_01g0136500 RBH 1.404961 2.317796 0.000000
Nipponbare | IRGSP 1.0 | MSU LOC_Os01g04530 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os01g0136500 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_01g0002640 RBH 0.0 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_01g0002580 RBH 0.0 0.0 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_01g0002630 RBH 2.596569 1.368594 1.500379
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_01g0002530 RBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_01g0002640 RBH 0.0 2.042083 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_01G0034200 SBH 0.00408 0.0224565 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_01g0002540 RBH 0.040325 0.0 0.025854
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_01G0036000 RBH 0 0 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_01g0002350 SBH 0.985835 0.241587 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_01g0002620 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_01g0002640 RBH 0.000000 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_01g0002680 RBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_01g0002580 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_01G002660 RBH 1.803908 2.210027 2.645865
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_01g0002590 RBH 0.993335 18.521654 2.071642
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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