Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_Ung0002570 | OGI:99008550 | 1/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | ChrUN-Ctg38:6327-10575 | ||||||||
| Gene Symbol | CYP71Y5, OsCYP71Y5 | ||||||||||
| DNA seq | atggcagatcttcacacctatctgtaccttggcctggcgctcgtttccctgctcgccgtgcaactcgccaggcgtaggcgctcgtcggcggcgcatggctctggcgcgctgcggctgccgccggggccgtggcagctgccgatcatcggcagcctgcaccacctcgtcggcaagctcccgcaccaagcgatgcgcgacctggcgcgtcgccacgggccggtcatgatgctccgcctgggcgaggtgcccacgctggtggtgtcgtcgccggaggcggcgcgcgaggtgaccaagacccacgacacgtcgttcgcgtcgcggccgctgagcgccaccacgcgcgtgttcagcaacggcggcagggacatcgtgttcgccccgtacggggactactggcgccagctccggaagatcaccgtgacggagctcctcagcgcgcgccgcgtcgcctccttccgcgccatccgcgaggaggaggtcgccgccatgctgcgcgcggtggccgcctccgcggcggccgggcgcgccgtcgagatgcggccgctgctgtcggcgctcgtgtccgactccaccgtgcgcgccgtgatgggcgaccagttcccccaccgcgacgtgttcctccgcgagctcgaccgctccatcgagctcgtggccgggttcaacccggcggacttgtggccatcgtcgcgcctcgccggctgtctcaccggcaccatgcgccaggccaagaaatgctgggacacgatgtccagcgtcctcgaaagcaccatccaggagcacctccagaagaatggcagcagcggcggcggcgctggagccaccgacgaggacctcatcgatgttttgctaaggatacagaaggagggtgggctccagttcccgttcgacatggacgtcatcaagtctgtcatccatgtaagtgactacgccccccacgagttatctcagggcactgtttagcacagctccagtttcacctctcttgaagtttggagcgcagccaaacagttttagctccatcttaaaaatagaagcacagctgggtagagcgttctcaactcgataggtggagctggatttagattgttccacaacttcactttatacctaactcctacattaaatggaaaaattggagctctatcaaacatacccttagatcattttccgtgtcatgtgccaactgtcaacttgtcctccaacttgacactatggcatctggtcacatatggtttttaaccagaaagcagtacatagctttttagctggtaagcacggtcatcgctttgcttacgtcactacttcacacaagtaaattgcgtcggatgggaaagccatataagtgccggattttccactcggcatctaacagacgcactaatgaggagcgctatcgatagaccgacacctataaattgtacgatttgcgaaaagaaaagactcagctcaagctcaagtgagttgaaccgatgctccaaatccatcaaaaaaaatgaattgaaaggcacaataacacaagaatgctcataatagaatcaaacaagcattcatcatccaacatcccagaacaagcactagagcactagaacgggcgccgccgctcacccttgttgacgtcgaaggaaggagaagacagatgctgctcggggaccagcgcgggggccaaatccgatggaccccgaactcaggcctgctggacttggcatcggttccaccgccgtcaccgttgccactcgcgagggagagggtgtcgtcgtttctctcgagggagagggtgttgctgccgctcgcaaaggagaggatgttgccactactcgcgagggagagggtgccaccagtgctcgctggtggcgaggggaaaatgagagaacagtgggttagaggactcagcgtgaatggataagaatgcgaggctcaacttagcttggtttttacgggtacctgtgttttaattcgccagcaactataatacattataatacattataggtgctggttcttttaaaaaatcaatatcaatagtattactgctagtttttctctaaaaccggtacctatagttgttcaaaggtatcggttgtatacttttttggcccatggaggtgggaaatggtaataagtaccggttccaattgaatcggctactatgagccgagccctattagaagttctatagtagtgtgtataagctgttactgcttagaacaacaaaagataattatgataaaacttttatacatgagtttgttagtaaattaaaatcaaatattgaaagttaaactttaattaaaaaaaccacaaagagtgaaatgtaactcatatcaaatttcggctatagcttataagctgaaggttaaacgatgggagtgtacagagtgaagacatgatgaacatcataagaacactacaaaaccttagagttgggccagttggctctcttcgtgttcattgctgcgtcttcgaggtagaatggagtggacatcctctcggtttgtgcatatcgtatataaagtcataaacttttttcttaaaaaaaataaaagatagatctatggtacatcaccccacaaacatgctaaaaaaatatatttatataggtgtcaaatttaaacttacatgtttattaagtgatataccacatacgtcaaatttgaacttacatatttgtgggctgatatacaatatattgttctatcttatcaaatttgtaattaactttttagataacactgcaccgttttttaatagatgatgttaacttttgatatgacatctgtccatttgtcttattttcaaaaaaaaatattaatattatttattttgttctaacttattttattattatataaatttaagtagggcttgtatctaactgttattctaaatgttattttaaaatttaatcacatcatctatttgaagaaaacgaagaacgaaggtagtatatatataaaaacatcacctgtagaaactaatagagacctcccccagtccccctcttccggaaattcctactatctgatctcattcctctgcttcttttcagcgcttctccctcatctatgcctctaattgtctgatttttttgtatcttgtatctcgggtttattagagtgagcctacggtacgaatttgatcgccattgaaagccatgaagtccaatctgttcgttctttcgtgatggtcagctacgcagcttcaataaaaatataggaaagtgaaatcatccatcgaggagatatcctctcgtttcttgcatatcacttaaatagtcataaaaaatataaaaaaaattgacaacatagattattatgaaatatatcactccacaaacatgcaagtttaaattcaacttctacaagttataacaaaaataacaaatatagctacgaatgtacgataactattttcagtttaatttgttatttttgttgcaacttatagtagttgaatttggtcttgcatgtttgtggagtcatatatttcgtattaatctatgttgtcaatttttttaaaaaatttttaatataacatgcaaaaaaacgaggggatgttccctcgagggatgaaaatcaacgtgctaaaaatatggatcacatgcatgcagaatgtctttggcgccggcagcgagacgtcggcgacgacgctggggtgggcgatcgctgagctaatccggaacccgatggcgatgaagaaggcgacggccgaggtgaggcaagccttcgcagcggccggcgttgtgtcagaggccgcgctcagtgagctccgatacctgcacctcgtcatcaaggagacgctccgtctccacccaccggggccactgctgctgccgcgcgagtgccgggagcagtgcaaggtgctcggctacgacgtgccgcgcggcacacaggtgctggtcaacgtctgggcgatcggccgcgacccgcggtactggcctggcggctcgcccgaggagttccggccggagcggttcggcgacggcgagccagccgccgcgttggatttcaagggcaccgactacgagcttctgccgttcggcgccggccggcggatgtgccccgggttggcgttcgggctcgccaacgtggagctccctctcgccagcttgctcttccactttgactgggaggtgcccggaatggccgacccgaccaagctcgacatgactgaggcgttcggcatcggtgttcgccggaaggctgacctcatcattcgccccatactccgcgtgcccgtgcccggcgtctag
More
|
||||||||||
| CDS seq | atggcagatcttcacacctatctgtaccttggcctggcgctcgtttccctgctcgccgtgcaactcgccaggcgtaggcgctcgtcggcggcgcatggctctggcgcgctgcggctgccgccggggccgtggcagctgccgatcatcggcagcctgcaccacctcgtcggcaagctcccgcaccaagcgatgcgcgacctggcgcgtcgccacgggccggtcatgatgctccgcctgggcgaggtgcccacgctggtggtgtcgtcgccggaggcggcgcgcgaggtgaccaagacccacgacacgtcgttcgcgtcgcggccgctgagcgccaccacgcgcgtgttcagcaacggcggcagggacatcgtgttcgccccgtacggggactactggcgccagctccggaagatcaccgtgacggagctcctcagcgcgcgccgcgtcgcctccttccgcgccatccgcgaggaggaggtcgccgccatgctgcgcgcggtggccgcctccgcggcggccgggcgcgccgtcgagatgcggccgctgctgtcggcgctcgtgtccgactccaccgtgcgcgccgtgatgggcgaccagttcccccaccgcgacgtgttcctccgcgagctcgaccgctccatcgagctcgtggccgggttcaacccggcggacttgtggccatcgtcgcgcctcgccggctgtctcaccggcaccatgcgccaggccaagaaatgctgggacacgatgtccagcgtcctcgaaagcaccatccaggagcacctccagaagaatggcagcagcggcggcggcgctggagccaccgacgaggacctcatcgatacgtcggcgacgacgctggggtgggcgatcgctgagctaatccggaacccgatggcgatgaagaaggcgacggccgaggtgaggcaagccttcgcagcggccggcgttgtgtcagaggccgcgctcagtgagctccgatacctgcacctcgtcatcaaggagacgctccgtctccacccaccggggccactgctgctgccgcgcgagtgccgggagcagtgcaaggtgctcggctacgacgtgccgcgcggcacacaggtgctggtcaacgtctgggcgatcggccgcgacccgcggtactggcctggcggctcgcccgaggagttccggccggagcggttcggcgacggcgagccagccgccgcgttggatttcaagggcaccgactacgagcttctgccgttcggcgccggccggcggatgtgccccgggttggcgttcgggctcgccaacgtggagctccctctcgccagcttgctcttccactttgactgggaggtgcccggaatggccgacccgaccaagctcgacatgactgaggcgttcggcatcggtgttcgccggaaggctgacctcatcattcgccccatactccgcgtgcccgtgcccggcgtctag
More
|
||||||||||
| Protein seq | MADLHTYLYLGLALVSLLAVQLARRRRSSAAHGSGALRLPPGPWQLPIIGSLHHLVGKLPHQAMRDLARRHGPVMMLRLGEVPTLVVSSPEAAREVTKTHDTSFASRPLSATTRVFSNGGRDIVFAPYGDYWRQLRKITVTELLSARRVASFRAIREEEVAAMLRAVAASAAAGRAVEMRPLLSALVSDSTVRAVMGDQFPHRDVFLRELDRSIELVAGFNPADLWPSSRLAGCLTGTMRQAKKCWDTMSSVLESTIQEHLQKNGSSGGGAGATDEDLIDTSATTLGWAIAELIRNPMAMKKATAEVRQAFAAAGVVSEAALSELRYLHLVIKETLRLHPPGPLLLPRECREQCKVLGYDVPRGTQVLVNVWAIGRDPRYWPGGSPEEFRPERFGDGEPAAALDFKGTDYELLPFGAGRRMCPGLAFGLANVELPLASLLFHFDWEVPGMADPTKLDMTEAFGIGVRRKADLIIRPILRVPVPGV |
||||||||||
| Function | Dolabradiene monooxygenase [UniProtKB/Swiss-Prot:A0A1D6GQ67] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_Ung0002570 | OsLima_Ung0002570.01 | ChrUN-Ctg38 | 6327 | 10575 | + | NAM | ||
| CDS seq | atggcagatcttcacacctatctgtaccttggcctggcgctcgtttccctgctcgccgtgcaactcgccaggcgtaggcgctcgtcggcggcgcatggctctggcgcgctgcggctgccgccggggccgtggcagctgccgatcatcggcagcctgcaccacctcgtcggcaagctcccgcaccaagcgatgcgcgacctggcgcgtcgccacgggccggtcatgatgctccgcctgggcgaggtgcccacgctggtggtgtcgtcgccggaggcggcgcgcgaggtgaccaagacccacgacacgtcgttcgcgtcgcggccgctgagcgccaccacgcgcgtgttcagcaacggcggcagggacatcgtgttcgccccgtacggggactactggcgccagctccggaagatcaccgtgacggagctcctcagcgcgcgccgcgtcgcctccttccgcgccatccgcgaggaggaggtcgccgccatgctgcgcgcggtggccgcctccgcggcggccgggcgcgccgtcgagatgcggccgctgctgtcggcgctcgtgtccgactccaccgtgcgcgccgtgatgggcgaccagttcccccaccgcgacgtgttcctccgcgagctcgaccgctccatcgagctcgtggccgggttcaacccggcggacttgtggccatcgtcgcgcctcgccggctgtctcaccggcaccatgcgccaggccaagaaatgctgggacacgatgtccagcgtcctcgaaagcaccatccaggagcacctccagaagaatggcagcagcggcggcggcgctggagccaccgacgaggacctcatcgatacgtcggcgacgacgctggggtgggcgatcgctgagctaatccggaacccgatggcgatgaagaaggcgacggccgaggtgaggcaagccttcgcagcggccggcgttgtgtcagaggccgcgctcagtgagctccgatacctgcacctcgtcatcaaggagacgctccgtctccacccaccggggccactgctgctgccgcgcgagtgccgggagcagtgcaaggtgctcggctacgacgtgccgcgcggcacacaggtgctggtcaacgtctgggcgatcggccgcgacccgcggtactggcctggcggctcgcccgaggagttccggccggagcggttcggcgacggcgagccagccgccgcgttggatttcaagggcaccgactacgagcttctgccgttcggcgccggccggcggatgtgccccgggttggcgttcgggctcgccaacgtggagctccctctcgccagcttgctcttccactttgactgggaggtgcccggaatggccgacccgaccaagctcgacatgactgaggcgttcggcatcggtgttcgccggaaggctgacctcatcattcgccccatactccgcgtgcccgtgcccggcgtctag
More
|
|||||||
| Protein seq | MADLHTYLYLGLALVSLLAVQLARRRRSSAAHGSGALRLPPGPWQLPIIGSLHHLVGKLPHQAMRDLARRHGPVMMLRLGEVPTLVVSSPEAAREVTKTHDTSFASRPLSATTRVFSNGGRDIVFAPYGDYWRQLRKITVTELLSARRVASFRAIREEEVAAMLRAVAASAAAGRAVEMRPLLSALVSDSTVRAVMGDQFPHRDVFLRELDRSIELVAGFNPADLWPSSRLAGCLTGTMRQAKKCWDTMSSVLESTIQEHLQKNGSSGGGAGATDEDLIDTSATTLGWAIAELIRNPMAMKKATAEVRQAFAAAGVVSEAALSELRYLHLVIKETLRLHPPGPLLLPRECREQCKVLGYDVPRGTQVLVNVWAIGRDPRYWPGGSPEEFRPERFGDGEPAAALDFKGTDYELLPFGAGRRMCPGLAFGLANVELPLASLLFHFDWEVPGMADPTKLDMTEAFGIGVRRKADLIIRPILRVPVPGV
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0641200 | SBH | 0.0 | 0.0 | 0.831479 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g43350 | SBH | 1.343305 | 0.743246 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0641200 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0023900 | SBH | 0.0 | 9.763369 | 0.344786 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0023700 | SBH | 0.0 | 5.024803 | 0.028782 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0023840 | SBH | 0.000000 | 2.982643 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0023440 | SBH | 0.0 | 0.081100 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0023890 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0409300 | SBH | 0.850981 | 0.501265 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0023390 | SBH | 0.000000 | 0.489824 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0084000 | SBH | 2.403291 | 3.7092115 | 0.139474 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0023840 | RBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0023770 | SBH | 0.0 | 11.928889 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0023450 | SBH | 0.0 | 6.840860 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0024090 | SBH | 0.192809 | 0.0 | 0.601614 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0023690 | SBH | 0.0 | 12.636143 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G023490 | SBH | 0.0 | 0.0 | 1.736565 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0023690 | SBH | 0.360502 | 0.0 | 1.218952 |
