Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_12g0018950 | OGI:12064650 | 15/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr12:23743686-23744060 | ||||||||
| Gene Symbol | WAKL21.2, OsWAKL21.2, OsWAKL21 | ||||||||||
| DNA seq | atgaccgactcgatcccgcccaactccacggccgaggcgctcggcgtcggcatgttcgcccggtgggacacggtcgaggagccccggtgcgacaacctgctgacgtccgccttctacggggagacgccggagggggtgttcgcgctggagctcgccgtggcggagctgggatggtgggtcaacgggagctgcaaacacagcgccgccgccgccggcgacctcgccgggcgatgcgcggcgaacgcgacgtgccacgacgtgcagaccccgggaggcgagtggggccaccagtgcaagtgcctgccggggtttaccggcgacgggttcgccgccggcgacggatgcaaCctttccggtgagtcctccactctctaa |
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| CDS seq | atgaccgactcgatcccgcccaactccacggccgaggcgctcggcgtcggcatgttcgcccggtgggacacggtcgaggagccccggtgcgacaacctgctgacgtccgccttctacggggagacgccggagggggtgttcgcgctggagctcgccgtggcggagctgggatggtgggtcaacgggagctgcaaacacagcgccgccgccgccggcgacctcgccgggcgatgcgcggcgaacgcgacgtgccacgacgtgcagaccccgggaggcgagtggggccaccagtgcaagtgcctgccggggtttaccggcgacgggttcgccgccggcgacggatgcaaCctttccggtgagtcctccactctctaa |
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| Protein seq | MTDSIPPNSTAEALGVGMFARWDTVEEPRCDNLLTSAFYGETPEGVFALELAVAELGWWVNGSCKHSAAAAGDLAGRCAANATCHDVQTPGGEWGHQCKCLPGFTGDGFAAGDGCNLSGESSTL |
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| Function | Wall-associated receptor kinase-like 14 [UniProtKB/Swiss-Prot:Q8RY67] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_12g0018950 | OsLima_12g0018950.01 | Chr12 | 23743686 | 23744060 | + | NAM | ||
| CDS seq | atgaccgactcgatcccgcccaactccacggccgaggcgctcggcgtcggcatgttcgcccggtgggacacggtcgaggagccccggtgcgacaacctgctgacgtccgccttctacggggagacgccggagggggtgttcgcgctggagctcgccgtggcggagctgggatggtgggtcaacgggagctgcaaacacagcgccgccgccgccggcgacctcgccgggcgatgcgcggcgaacgcgacgtgccacgacgtgcagaccccgggaggcgagtggggccaccagtgcaagtgcctgccggggtttaccggcgacgggttcgccgccggcgacggatgcaaCctttccggtgagtcctccactctctaa
More
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| Protein seq | MTDSIPPNSTAEALGVGMFARWDTVEEPRCDNLLTSAFYGETPEGVFALELAVAELGWWVNGSCKHSAAAAGDLAGRCAANATCHDVQTPGGEWGHQCKCLPGFTGDGFAAGDGCNLSGESSTL |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0595800 | SBH | 0.493152 | 0.710144 | 4.626463 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g40419 | SBH | 0.345398 | 0.475524 | 1.217602 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0595800 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0019470 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0019580 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0019910 | RBH | 0.0 | 0.0 | 0.572940 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0019230 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0018840 | RBH | 0.0 | 0.0 | 3.015351 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0333600 | RBH | 0.0901575 | 0.773457 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0018710 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0363600 | RBH | 0.2367845 | 1.037613 | 0.0348125 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0019180 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0019100 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0019130 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0019310 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G018950 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0018640 | RBH | 0.0 | 0.0 | 0.0 |
