Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_12g0006250 | OGI:12013960 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr12:5113687-5118478 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | acaggctgaatccacattgacgatgctatacacaattagccattccactctcactgtggtagctaggggagagagaacaaattaacagaccataaattcgaaagttttggaagataaaaactgtcgaacgttttttttagagattccatagcttaaatgaaaagagtaataaagctattaacggtagcaaataacaagcttctagcaaagatcatggtaacagaaacagagtttgcctagatttcagtagaaagcaacgatcactgctgtctgtccaaagtctcttcactgcattttttgccgtccatgaagtatgaatctcctaaataggtgattataattagtcatcaagtgtatcactataaacaaatttgtcaagaatgaactgaaaaaacaaaaatatttgaacataggaccaaatcttaagtttaatagcttatggagtctgttaaagaaacttttgcacaatagagtatcgtagcatacatgtgaatggtgatatgtgaactttcgaaatgctaccttctagacaagctgtgcccattcttcaagtgacacgagagaattgggatatattgcgtttgcaaacaaacttccaatttgtctcaaatacaaatcaaactagggaaagttgcgtcacaaaacaactgaaattgaaattaaaagaaaacagggaatttactaataggaagaacatattaaaataaaggcatttcaggaagactcttggatgaaaaattcgaaacaattttggcatgttgagacattttccttgcacataaattgtttgagctaatcagagagacatatgacatgacaaaataagaacgaagagctcagagaaggcatgcagtacctatgtgcaccctggcaatgtgggagatattattccattcagggctttcatttactccaaccttctcctccagttctttgcagcagcaagtgatatcgagcttctgcagagaggatgggaaatcaggaagagactgaagcttcccagcaccatataacagcaagaagttgagagagcataggtctcgcatatggaggggcagagattccaaagaactggcactgtaaatcttcagggattggagctttccacggttccaaagaagccattcctcaggtaagctctccagctgcgttccacctctgatcaccaaccccttggtgtgacagagacccttgagtggctcaagatgcagtatgtctggcagatcaatttcaagatagtctatctgcagggtgctagtagtcaccaccacaggctcttcaccactagacaatgcgtcgggagtttgagatgacccgatcgccatgagcttactacaagcactgattttcagcttaataaggtattgaagggaaccaagaccacccaaggatgagagattctcgcatcctattatctcgagaaacttcagagacttgagactcttgaacacatcatctgaggggagtgattctaggtatttgcacttctccaacaccagctcagaaagacgcgtgagtccttgtagtgctccaatcagtggaagttcaagttcaccacagtaattgacattcagtttttgaagtgttaatggcaggaatgtatctccaacacctctcgatgtcctcagctttggacagtttctgatatcaagctctctaagttcattcatctgttcaaatgccaatggagcagcctccagatcttcacaatctgcgatgcgtaggacatggatgcttttgatgtagtctccctgcactagaaggctctcttcaagtgagttcagacatttacattcttcgacaactacgaccaggagcctggatgacttggtctcgaggttctcattgcattcctttcctatcctaggaagtttggtcaagccaacattacttgtttcaaaatgaaccaaggtagtaggcaggataggcaatgccctcagctctttgcagcgtcttactatcatagtgtcaagatttggaggaagggataaatcaatgcaaccactaattgacacatcagatgattgaccaatctgttgcaagctaggaagacactccaaccaaagatgtttaagagataataactctccaagtgaaggaagtttttcccaatataaacaccttgccaactcaagtgacactaggttcttgacgcggagattctcaatccaaataggagactttacaccaccataacctgaaattctcagcgtttcaatattagcatgtggctcaaggtgattaagaagcaactcatcttttccgttttccacagccgcacgtgctgaccatgccaaagataacaaggtgatatatttcttattatttagcttgacattgtcagcttcttcatggctctcaacattctcaagaccaagcacctctagttcacgaagagtactcaagttgctgattgcgcttattttgttacatttgccaccttggatcctgtagttgtgcagctcctgaagtgaagtgagccttccaattgggaactcaagagttttgccgtaattcacatatcgtagatgatcaatgtttcccaaatacctcacttgttttggctcttcgcgagaaccattgaaacatttaactagcaataagtgataaagtctcacaagtccacttatggtatcaggagatatcctaggtagatcaatgtaacggaggtgctttagatgagcaatttttggaagatgaaatgtattctccaaatttgattgcagtagatgcagcgattttgattgttccagaacattttcaactgcatgaaataaattgctgtcaatcaaacctgggccttcaatgataacagtgcgcacattcttaaaatgtaagatcttcttaacctcctcagtagataaatagtcaattccagaaatacataggtgtcgaactgtatccttctcattttccaacatgccaggactgattattcttgcacattccccagaagatacataccttgccagttcatgcattaagtcatgcattatgtaatatttttctttcctttgactatacggatctactttgatattggtttcaaagaatgatttcccagctaattgagccaagatctgttctccaatgtcctcaagcctttttggtggtttatttccagcttgtgagatcagtcctgaacctatccacatcagcactaggtctttcattttaaatgcataatcttgcgggaatatactacagtatcgaaagcaaatctgaagctcggttggtagacagtagtagcttagtctgaggacttccataatatcatcttcacttcctttaaaatgttccaaaccttcttgcaagaaattgttccagtgttgaaaactcatcttgctccgcaaatggccaccaacaacctttgttaccaggggacatcctcctagtttcttcacaatttgtttgctgactggtttcaaatttggataatcttgtggattctgaccagaaaatacagaatgactgaagagctcaagattttcaccttcttctagtccttctattgtcaagaactctgtttcaattcccatggcttctgcggccaaaacagctactgactgcatccgtgttgttaacaaaattttgctcccactcttccctgtccttagaggagcaaacaacttttcccatttatctattttcttatcttcccacacatcatctaaaacaagcaaaaaatcagtagaatacttcagtttgtgtattaggttttgctgtagtgtctccaaacaattagcattaggtttttcccccgtagcagattctagtattttacttgtcacagatgttacatcaaagctatcagatacacacacccatataaccttgaaattcttcctaaccatttcttcacaaacacgttgagccaacgtagtcttccccatgccaccgtgaccaattaatgacagaataggaatatggtcggtgctcatcaaatttccagaagcgtcagttgatgcatttgtcagccatctaactatcttttctttctccttttctcgtccaacaaatttaggcggagttaatgtcaaacctgtcacacgatcatcgttcgttgaatactcctgctgctgactacacgaagcaacctctttgagatgctctgtgactgtgagaatgctcataatatctgaagcaaccttgtctaaaccctccacagcttccctcaacctcttgagagtgccccggtgagtacattgtttcaaattcttgtccaaactactgacatgtttaacagacttaataactttgtgcttcaccttagagaaagaggaaccccagtcactaaccttgtggtcctttgccatttctttgagtttgtagtactcgagcacatcaatcacatcctcagcctcctcaactgcgtacctgagctgccataaccatgcatctagtgcactgctctgttcctttacatacctggggttgacaatatcgagcatgacctggatcttcggcatcgactgcagtagcctgttcttaatatcttcaatgccttcaaccttgtactctttcaggtaggtgaaagccttgttgatccagaaggagatggctgcagttgccactgcctttccagcaaacactagtgccatggcagaagctatagagaaagatctctatggagagattagtatattacagcatatggagatgcacgtaaaatttgcaagagaagaagcaacacaaatagagattcaagacgaagatggctactgtagaagcacacaaaggaaaaaaatcctctccatgcacatgtcaatgtaactatatcacaggctcatat
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| CDS seq | atggcactagtgtttgctggaaaggcagtggcaactgcagccatctccttctggatcaacaaggctttcacctacctgaaagagtacaaggttgaaggcattgaagatattaagaacaggctactgcagtcgatgccgaagatccaggtcatgctcgatattgtcaaccccaggtatgtaaaggaacagagcagtgcactagatgcatggttatggcagctcaggtacgcagttgaggaggctgaggatgtgattgatgtgctcgagtactacaaactcaaagaaatggcaaaggaccacaaggttagtgactggggttcctctttctctaaggtgaagcacaaagttattaagtctgttaaacatgtcagtagtttggacaagaatttgaaacaatgtactcaccggggcactctcaagaggttgagggaagctgtggagggtttagacaaggttgcttcagatattatgagcattctcacagtcacagagcatctcaaagaggttgcttcgtgtagtcagcagcaggagtattcaacgaacgatgatcgtgtgacaggtttgacattaactccgcctaaatttgttggacgagaaaaggagaaagaaaagatagttagatggctgacaaatgcatcaactgacgcttctggaaatttgatgagcaccgaccatattcctattctgtcattaattggtcacggtggcatggggaagactacgttggctcaacgtgtttgtgaagaaatggttaggaagaatttcaaggttatatgggtgtgtgtatctgatagctttgatgtaacatctgtgacaagtaaaatactagaatctgctacgggggaaaaacctaatgctaattgtttggagacactacagcaaaacctaatacacaaactgaagtattctactgattttttgcttgttttagatgatgtgtgggaagataagaaaatagataaatgggaaaagttgtttgctcctctaaggacagggaagagtgggagcaaaattttgttaacaacacggatgcagtcagtagctgttttggccgcagaagccatgggaattgaaacagagttcttgacaatagaaggactagaagaaggtgaaaatcttgagctcttcagtcattctgtattttctggtcagaatccacaagattatccaaatttgaaaccagtcagcaaacaaattgtgaagaaactaggaggatgtcccctggtaacaaaggttgttggtggccatttgcggagcaagatgagttttcaacactggaacaatttcttgcaagaaggtttggaacattttaaaggaagtgaagatgatattatggaagtcctcagactaagctactactgtctaccaaccgagcttcagatttgctttcgatactgtagtatattcccgcaagattatgcatttaaaatgaaagacctagtgctgatgtggataggttcaggactgatctcacaagctggaaataaaccaccaaaaaggcttgaggacattggagaacagatcttggctcaattagctgggaaatcattctttgaaaccaatatcaaagtagatccgtatagtcaaaggaaagaaaaatattacataatgcatgacttaatgcatgaactggcaaggtatgtatcttctggggaatgtgcaagaataatcagtcctggcatgttggaaaatgagaaggatacagttcgacacctatgtatttctggaattgactatttatctactgaggaggttaagaagatcttacattttaagaatgtgcgcactgttatcattgaaggcccaggtttgattgacagcaatttatttcatgcagttgaaaatgttctggaacaatcaaaatcgctgcatctactgcaatcaaatttggagaatacatttcatcttccaaaaattgctcatctaaagcacctccgttacattgatctacctaggatatctcctgataccataagtggacttgtgagactttatcacttattgctagttaaatgtttcaatggttctcgcgaagagccaaaacaagtgaggtatttgggaaacattgatcatctacgatatgtgaattacggcaaaactcttgagttcccaattggaaggctcacttcacttcaggagctgcacaactacaggatccaaggtggcaaatgtaacaaaataagcgcaatcagcaacttgagtactcttcgtgaactagaggtgcttggtcttgagaatgttgagagccatgaagaagctgacaatgtcaagctaaataataagaaatatatcaccttgttatctttggcatggtcagcacgtgcggctgtggaaaacggaaaagatgagttgcttcttaatcaccttgagccacatgctaatattgaaacgctgagaatttcaggttatggtggtgtaaagtctcctatttggattgagaatctccgcgtcaagaacctagtgtcacttgagttggcaaggtgtttatattgggaaaaacttccttcacttggagagttattatctcttaaacatctttggttggagtgtcttcctagcttgcaacagattggtcaatcatctgatgtgtcaattagtggttgcattgatttatcccttcctccaaatcttgacactatgatagtaagacgctgcaaagagctgagggcattgcctatcctgcctactaccttggttcattttgaaacaagtaatgttggcttgaccaaacttcctaggataggaaaggaatgcaatgagaacctcgagaccaagtcatccaggctcctggtcgtagttgtcgaagaatgtaaatgtctgaactcacttgaagagagccttctagtgcagggagactacatcaaaagcatccatgtcctacgcatcgcagattgtgaagatctggaggctgctccattggcatttgaacagatgaatgaacttagagagcttgatatcagaaactgtccaaagctgaggacatcgagaggtgttggagatacattcctgccattaacacttcaaaaactgaatgtcaattactgtggtgaacttgaacttccactgattggagcactacaaggactcacgcgtctttctgagctggtgttggagaagtgcaaatacctagaatcactcccctcagatgatgtgttcaagagtctcaagtctctgaagtttctcgagataataggatgcgagaatctctcatccttgggtggtcttggttcccttcaataccttattaagctgaaaatcagtgcttgtagtaagctcatggcgatcgggtcatctcaaactcccgacgcattgtctagtggtgaagagcctgtggtggtgactactagcaccctgcagatagactatcttgaaattgatctgccagacatactgcatcttgagccactcaagggtctctgtcacaccaaggggttggtgatcagaggtggaacgcagctggagagcttacctgaggaatggcttctttggaaccgtggaaagctccaatccctgaagatttacagtgccagttctttggaatctctgcccctccatatgcgagacctatgctctctcaacttcttgctgttatatggtgctgggaagcttcagtctcttcctgatttcccatcctctctgcagaagctcgatatcacttgctgctgcaaagaactggaggagaaggttggagtaaatgaaagccctgaatggaataatatctcccacattgccagggtgcacataggagattcatacttcatggacggcaaaaaatgcagtgaagagactttggacagacagcagtga
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| Protein seq | MALVFAGKAVATAAISFWINKAFTYLKEYKVEGIEDIKNRLLQSMPKIQVMLDIVNPRYVKEQSSALDAWLWQLRYAVEEAEDVIDVLEYYKLKEMAKDHKVSDWGSSFSKVKHKVIKSVKHVSSLDKNLKQCTHRGTLKRLREAVEGLDKVASDIMSILTVTEHLKEVASCSQQQEYSTNDDRVTGLTLTPPKFVGREKEKEKIVRWLTNASTDASGNLMSTDHIPILSLIGHGGMGKTTLAQRVCEEMVRKNFKVIWVCVSDSFDVTSVTSKILESATGEKPNANCLETLQQNLIHKLKYSTDFLLVLDDVWEDKKIDKWEKLFAPLRTGKSGSKILLTTRMQSVAVLAAEAMGIETEFLTIEGLEEGENLELFSHSVFSGQNPQDYPNLKPVSKQIVKKLGGCPLVTKVVGGHLRSKMSFQHWNNFLQEGLEHFKGSEDDIMEVLRLSYYCLPTELQICFRYCSIFPQDYAFKMKDLVLMWIGSGLISQAGNKPPKRLEDIGEQILAQLAGKSFFETNIKVDPYSQRKEKYYIMHDLMHELARYVSSGECARIISPGMLENEKDTVRHLCISGIDYLSTEEVKKILHFKNVRTVIIEGPGLIDSNLFHAVENVLEQSKSLHLLQSNLENTFHLPKIAHLKHLRYIDLPRISPDTISGLVRLYHLLLVKCFNGSREEPKQVRYLGNIDHLRYVNYGKTLEFPIGRLTSLQELHNYRIQGGKCNKISAISNLSTLRELEVLGLENVESHEEADNVKLNNKKYITLLSLAWSARAAVENGKDELLLNHLEPHANIETLRISGYGGVKSPIWIENLRVKNLVSLELARCLYWEKLPSLGELLSLKHLWLECLPSLQQIGQSSDVSISGCIDLSLPPNLDTMIVRRCKELRALPILPTTLVHFETSNVGLTKLPRIGKECNENLETKSSRLLVVVVEECKCLNSLEESLLVQGDYIKSIHVLRIADCEDLEAAPLAFEQMNELRELDIRNCPKLRTSRGVGDTFLPLTLQKLNVNYCGELELPLIGALQGLTRLSELVLEKCKYLESLPSDDVFKSLKSLKFLEIIGCENLSSLGGLGSLQYLIKLKISACSKLMAIGSSQTPDALSSGEEPVVVTTSTLQIDYLEIDLPDILHLEPLKGLCHTKGLVIRGGTQLESLPEEWLLWNRGKLQSLKIYSASSLESLPLHMRDLCSLNFLLLYGAGKLQSLPDFPSSLQKLDITCCCKELEEKVGVNESPEWNNISHIARVHIGDSYFMDGKKCSEETLDRQQ |
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| Function | Putative disease resistance protein RGA1 [UniProtKB/Swiss-Prot:Q7XA42] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_12g0006250 | OsLima_12g0006250.01 | Chr12 | 5113687 | 5118478 | - | NAM | ||
| CDS seq | atggcactagtgtttgctggaaaggcagtggcaactgcagccatctccttctggatcaacaaggctttcacctacctgaaagagtacaaggttgaaggcattgaagatattaagaacaggctactgcagtcgatgccgaagatccaggtcatgctcgatattgtcaaccccaggtatgtaaaggaacagagcagtgcactagatgcatggttatggcagctcaggtacgcagttgaggaggctgaggatgtgattgatgtgctcgagtactacaaactcaaagaaatggcaaaggaccacaaggttagtgactggggttcctctttctctaaggtgaagcacaaagttattaagtctgttaaacatgtcagtagtttggacaagaatttgaaacaatgtactcaccggggcactctcaagaggttgagggaagctgtggagggtttagacaaggttgcttcagatattatgagcattctcacagtcacagagcatctcaaagaggttgcttcgtgtagtcagcagcaggagtattcaacgaacgatgatcgtgtgacaggtttgacattaactccgcctaaatttgttggacgagaaaaggagaaagaaaagatagttagatggctgacaaatgcatcaactgacgcttctggaaatttgatgagcaccgaccatattcctattctgtcattaattggtcacggtggcatggggaagactacgttggctcaacgtgtttgtgaagaaatggttaggaagaatttcaaggttatatgggtgtgtgtatctgatagctttgatgtaacatctgtgacaagtaaaatactagaatctgctacgggggaaaaacctaatgctaattgtttggagacactacagcaaaacctaatacacaaactgaagtattctactgattttttgcttgttttagatgatgtgtgggaagataagaaaatagataaatgggaaaagttgtttgctcctctaaggacagggaagagtgggagcaaaattttgttaacaacacggatgcagtcagtagctgttttggccgcagaagccatgggaattgaaacagagttcttgacaatagaaggactagaagaaggtgaaaatcttgagctcttcagtcattctgtattttctggtcagaatccacaagattatccaaatttgaaaccagtcagcaaacaaattgtgaagaaactaggaggatgtcccctggtaacaaaggttgttggtggccatttgcggagcaagatgagttttcaacactggaacaatttcttgcaagaaggtttggaacattttaaaggaagtgaagatgatattatggaagtcctcagactaagctactactgtctaccaaccgagcttcagatttgctttcgatactgtagtatattcccgcaagattatgcatttaaaatgaaagacctagtgctgatgtggataggttcaggactgatctcacaagctggaaataaaccaccaaaaaggcttgaggacattggagaacagatcttggctcaattagctgggaaatcattctttgaaaccaatatcaaagtagatccgtatagtcaaaggaaagaaaaatattacataatgcatgacttaatgcatgaactggcaaggtatgtatcttctggggaatgtgcaagaataatcagtcctggcatgttggaaaatgagaaggatacagttcgacacctatgtatttctggaattgactatttatctactgaggaggttaagaagatcttacattttaagaatgtgcgcactgttatcattgaaggcccaggtttgattgacagcaatttatttcatgcagttgaaaatgttctggaacaatcaaaatcgctgcatctactgcaatcaaatttggagaatacatttcatcttccaaaaattgctcatctaaagcacctccgttacattgatctacctaggatatctcctgataccataagtggacttgtgagactttatcacttattgctagttaaatgtttcaatggttctcgcgaagagccaaaacaagtgaggtatttgggaaacattgatcatctacgatatgtgaattacggcaaaactcttgagttcccaattggaaggctcacttcacttcaggagctgcacaactacaggatccaaggtggcaaatgtaacaaaataagcgcaatcagcaacttgagtactcttcgtgaactagaggtgcttggtcttgagaatgttgagagccatgaagaagctgacaatgtcaagctaaataataagaaatatatcaccttgttatctttggcatggtcagcacgtgcggctgtggaaaacggaaaagatgagttgcttcttaatcaccttgagccacatgctaatattgaaacgctgagaatttcaggttatggtggtgtaaagtctcctatttggattgagaatctccgcgtcaagaacctagtgtcacttgagttggcaaggtgtttatattgggaaaaacttccttcacttggagagttattatctcttaaacatctttggttggagtgtcttcctagcttgcaacagattggtcaatcatctgatgtgtcaattagtggttgcattgatttatcccttcctccaaatcttgacactatgatagtaagacgctgcaaagagctgagggcattgcctatcctgcctactaccttggttcattttgaaacaagtaatgttggcttgaccaaacttcctaggataggaaaggaatgcaatgagaacctcgagaccaagtcatccaggctcctggtcgtagttgtcgaagaatgtaaatgtctgaactcacttgaagagagccttctagtgcagggagactacatcaaaagcatccatgtcctacgcatcgcagattgtgaagatctggaggctgctccattggcatttgaacagatgaatgaacttagagagcttgatatcagaaactgtccaaagctgaggacatcgagaggtgttggagatacattcctgccattaacacttcaaaaactgaatgtcaattactgtggtgaacttgaacttccactgattggagcactacaaggactcacgcgtctttctgagctggtgttggagaagtgcaaatacctagaatcactcccctcagatgatgtgttcaagagtctcaagtctctgaagtttctcgagataataggatgcgagaatctctcatccttgggtggtcttggttcccttcaataccttattaagctgaaaatcagtgcttgtagtaagctcatggcgatcgggtcatctcaaactcccgacgcattgtctagtggtgaagagcctgtggtggtgactactagcaccctgcagatagactatcttgaaattgatctgccagacatactgcatcttgagccactcaagggtctctgtcacaccaaggggttggtgatcagaggtggaacgcagctggagagcttacctgaggaatggcttctttggaaccgtggaaagctccaatccctgaagatttacagtgccagttctttggaatctctgcccctccatatgcgagacctatgctctctcaacttcttgctgttatatggtgctgggaagcttcagtctcttcctgatttcccatcctctctgcagaagctcgatatcacttgctgctgcaaagaactggaggagaaggttggagtaaatgaaagccctgaatggaataatatctcccacattgccagggtgcacataggagattcatacttcatggacggcaaaaaatgcagtgaagagactttggacagacagcagtga
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| Protein seq | MALVFAGKAVATAAISFWINKAFTYLKEYKVEGIEDIKNRLLQSMPKIQVMLDIVNPRYVKEQSSALDAWLWQLRYAVEEAEDVIDVLEYYKLKEMAKDHKVSDWGSSFSKVKHKVIKSVKHVSSLDKNLKQCTHRGTLKRLREAVEGLDKVASDIMSILTVTEHLKEVASCSQQQEYSTNDDRVTGLTLTPPKFVGREKEKEKIVRWLTNASTDASGNLMSTDHIPILSLIGHGGMGKTTLAQRVCEEMVRKNFKVIWVCVSDSFDVTSVTSKILESATGEKPNANCLETLQQNLIHKLKYSTDFLLVLDDVWEDKKIDKWEKLFAPLRTGKSGSKILLTTRMQSVAVLAAEAMGIETEFLTIEGLEEGENLELFSHSVFSGQNPQDYPNLKPVSKQIVKKLGGCPLVTKVVGGHLRSKMSFQHWNNFLQEGLEHFKGSEDDIMEVLRLSYYCLPTELQICFRYCSIFPQDYAFKMKDLVLMWIGSGLISQAGNKPPKRLEDIGEQILAQLAGKSFFETNIKVDPYSQRKEKYYIMHDLMHELARYVSSGECARIISPGMLENEKDTVRHLCISGIDYLSTEEVKKILHFKNVRTVIIEGPGLIDSNLFHAVENVLEQSKSLHLLQSNLENTFHLPKIAHLKHLRYIDLPRISPDTISGLVRLYHLLLVKCFNGSREEPKQVRYLGNIDHLRYVNYGKTLEFPIGRLTSLQELHNYRIQGGKCNKISAISNLSTLRELEVLGLENVESHEEADNVKLNNKKYITLLSLAWSARAAVENGKDELLLNHLEPHANIETLRISGYGGVKSPIWIENLRVKNLVSLELARCLYWEKLPSLGELLSLKHLWLECLPSLQQIGQSSDVSISGCIDLSLPPNLDTMIVRRCKELRALPILPTTLVHFETSNVGLTKLPRIGKECNENLETKSSRLLVVVVEECKCLNSLEESLLVQGDYIKSIHVLRIADCEDLEAAPLAFEQMNELRELDIRNCPKLRTSRGVGDTFLPLTLQKLNVNYCGELELPLIGALQGLTRLSELVLEKCKYLESLPSDDVFKSLKSLKFLEIIGCENLSSLGGLGSLQYLIKLKISACSKLMAIGSSQTPDALSSGEEPVVVTTSTLQIDYLEIDLPDILHLEPLKGLCHTKGLVIRGGTQLESLPEEWLLWNRGKLQSLKIYSASSLESLPLHMRDLCSLNFLLLYGAGKLQSLPDFPSSLQKLDITCCCKELEEKVGVNESPEWNNISHIARVHIGDSYFMDGKKCSEETLDRQQ
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.055406 | 0.142589 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0209901 | SBH | 10.624657 | 7.397429 | 10.810076 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g10180 | RBH | 0.896711 | 0.870242 | 0.208814 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0209901 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0006410 | RBH | 0.342298 | 5.712193 | 1.303259 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0006480 | RBH | 0.066134 | 1.659943 | 1.612560 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0006480 | RBH | 0.536991 | 3.769075 | 1.326715 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0006390 | RBH | 0.036712 | 0.101955 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0006380 | RBH | 1.629057 | 11.149659 | 2.502362 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0080100 | RBH | 1.512003 | 5.471887 | 1.7124515 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0006350 | RBH | 0.065125 | 0.138155 | 0.610684 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0085700 | RBH | 0.89229 | 2.212554 | 5.0626025 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0008840 | SBH | 0.021630 | 0.126688 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0006500 | RBH | 0.085714 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0006360 | RBH | 2.078402 | 2.225417 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0006380 | RBH | 0.128638 | 0.0 | 0.162272 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0006320 | RBH | 0.197011 | 1.544243 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G006250 | RBH | 0.274192 | 1.022645 | 0.362927 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0006390 | RBH | 0.301946 | 7.676707 | 2.707335 |
