Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_11g0017830 | OGI:11062260 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr11:23055873-23056874 | ||||||||
| Gene Symbol | WAK120, OsWAK120 | ||||||||||
| DNA seq | tcatttttggttgatttgtgagaggatgccttcgagtgaacagttcacttgtctcatggtaggtcgatcatcacctcttaattctatacatgatatggctagttgggaaacctcttggatttcagtgcccctttcttttataacttgagaatctagcatttggaccaaattacctgcaccgtgtaagttgacaaaatctgcaacaaggccatcaccttcagaggacaaatatggaaatagttttctcttggtgagcaattccactggtataacaccaaagctgtagacatcgcttttatcattgagacgaccagtgtAaaagtacataggatccaaatatcctacagtaccttgaactgccattgttagtgctgttttctcgattgggatataccttgaagctccaaagtccaatacctttgatgtcagattatcatcaagtagtatgttactggactttatatctctatggattattgggattgtaactgacgagtgaagataggaaagagcatttgcgatttcggctgcaatcctcaacctattgctccaggatagcgaccttgggccctcaccatgaagatggtgatacagggttccattggaaataaattcataaaccaacaatgggacttcagtctctagacaacatccaattagttttactacatttttatggttgatttgtgagaggatggcaacctcatttatgaaatcagctatttctttctggaccactatatttgatatcttgatggctaccacatgtaggtctgatagaatccctttataaacagtgccatgccctccgcctccaagctcacgagctttgtcaaagttgttagttgccttttcaagctcatctaacgtgatgatcattctttcagcaatatctgccctttgggataccaattgttcaagcaattgtccacgattcagaatgaaaaacttttgtcttagctttattttcctcctatgctttatccgtctggtgaggaacat
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| CDS seq | atgttcctcaccagacggataaagcataggaggaaaataaagctaagacaaaagtttttcattctgaatcgtggacaattgcttgaacaattggtatcccaaagggcagatattgctgaaagaatgatcatcacgttagatgagcttgaaaaggcaactaacaactttgacaaagctcgtgagcttggaggcggagggcatggcactgtttataaagggattctatcagacctacatgtggtagccatcaagatatcaaatatagtggtccagaaagaaatagctgatttcataaatgaggttgccatcctctcacaaatcaaccataaaaatgtagtaaaactaattggatgttgtctagagactgaagtcccattgttggtttatgaatttatttccaatggaaccctgtatcaccatcttcatggtgagggcccaaggtcgctatcctggagcaataggttgaggattgcagccgaaatcgcaaatgctctttcctatcttcactcgtcagttacaatcccaataatccatagagatataaagtccagtaacatactacttgatgataatctgacatcaaaggtattggactttggagcttcaaggtatatcccaatcgagaaaacagcactaacaatggcagttcaaggtactgtaggatatttggatcctatgtactttTacactggtcgtctcaatgataaaagcgatgtctacagctttggtgttataccagtggaattgctcaccaagagaaaactatttccatatttgtcctctgaaggtgatggccttgttgcagattttgtcaacttacacggtgcaggtaatttggtccaaatgctagattctcaagttataaaagaaaggggcactgaaatccaagaggtttcccaactagccatatcatgtatagaattaagaggtgatgatcgacctaccatgagacaagtgaactgttcactcgaaggcatcctctcacaaatcaaccaaaaatga
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| Protein seq | MFLTRRIKHRRKIKLRQKFFILNRGQLLEQLVSQRADIAERMIITLDELEKATNNFDKARELGGGGHGTVYKGILSDLHVVAIKISNIVVQKEIADFINEVAILSQINHKNVVKLIGCCLETEVPLLVYEFISNGTLYHHLHGEGPRSLSWSNRLRIAAEIANALSYLHSSVTIPIIHRDIKSSNILLDDNLTSKVLDFGASRYIPIEKTALTMAVQGTVGYLDPMYFYTGRLNDKSDVYSFGVIPVELLTKRKLFPYLSSEGDGLVADFVNLHGAGNLVQMLDSQVIKERGTEIQEVSQLAISCIELRGDDRPTMRQVNCSLEGILSQINQK |
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| Function | Wall-associated receptor kinase 2 [UniProtKB/Swiss-Prot:Q9LMP1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_11g0017830 | OsLima_11g0017830.01 | Chr11 | 23055873 | 23056874 | - | NAM | ||
| CDS seq | atgttcctcaccagacggataaagcataggaggaaaataaagctaagacaaaagtttttcattctgaatcgtggacaattgcttgaacaattggtatcccaaagggcagatattgctgaaagaatgatcatcacgttagatgagcttgaaaaggcaactaacaactttgacaaagctcgtgagcttggaggcggagggcatggcactgtttataaagggattctatcagacctacatgtggtagccatcaagatatcaaatatagtggtccagaaagaaatagctgatttcataaatgaggttgccatcctctcacaaatcaaccataaaaatgtagtaaaactaattggatgttgtctagagactgaagtcccattgttggtttatgaatttatttccaatggaaccctgtatcaccatcttcatggtgagggcccaaggtcgctatcctggagcaataggttgaggattgcagccgaaatcgcaaatgctctttcctatcttcactcgtcagttacaatcccaataatccatagagatataaagtccagtaacatactacttgatgataatctgacatcaaaggtattggactttggagcttcaaggtatatcccaatcgagaaaacagcactaacaatggcagttcaaggtactgtaggatatttggatcctatgtactttTacactggtcgtctcaatgataaaagcgatgtctacagctttggtgttataccagtggaattgctcaccaagagaaaactatttccatatttgtcctctgaaggtgatggccttgttgcagattttgtcaacttacacggtgcaggtaatttggtccaaatgctagattctcaagttataaaagaaaggggcactgaaatccaagaggtttcccaactagccatatcatgtatagaattaagaggtgatgatcgacctaccatgagacaagtgaactgttcactcgaaggcatcctctcacaaatcaaccaaaaatga
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| Protein seq | MFLTRRIKHRRKIKLRQKFFILNRGQLLEQLVSQRADIAERMIITLDELEKATNNFDKARELGGGGHGTVYKGILSDLHVVAIKISNIVVQKEIADFINEVAILSQINHKNVVKLIGCCLETEVPLLVYEFISNGTLYHHLHGEGPRSLSWSNRLRIAAEIANALSYLHSSVTIPIIHRDIKSSNILLDDNLTSKVLDFGASRYIPIEKTALTMAVQGTVGYLDPMYFYTGRLNDKSDVYSFGVIPVELLTKRKLFPYLSSEGDGLVADFVNLHGAGNLVQMLDSQVIKERGTEIQEVSQLAISCIELRGDDRPTMRQVNCSLEGILSQINQK
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0245200 | SBH | 0.112508 | 0.000000 | 0.591653 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g35860 | SBH | 0.000000 | 0.152535 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0245200 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0017650 | SBH | 0.113690 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0017700 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0017590 | SBH | 0.547176 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0017210 | RBH | 0.127119 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0017500 | SBH | 0.614340 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0328600 | RBH | 0.0109995 | 0.009286 | 0.011593 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0017960 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0340500 | SBH | 0.501553 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0017880 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0017870 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0017540 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0017330 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0017370 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G017450 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0017760 | SBH | 0.0 | 0.0 | 0.0 |
