Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsLima_11g0008100 | OGI:11015520 | 4/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr11:7081113-7081331 | ||||||||
Gene Symbol | - | ||||||||||
DNA seq | atggcgccacggccggcccagcacgcacgaacggacggacccctgcgcctggaggaaggagaggatgtggtggagcacctcgtccgggagagcgccgatgcggtcgcgttcgcctccgcctccgcctccgcctccgctcgccgcagccgctttcttggccttattctttggaggaggcattacgtcgaacaggtggcggggggtcacctccggaactag |
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CDS seq | atggcgccacggccggcccagcacgcacgaacggacggacccctgcgcctggaggaaggagaggatgtggtggagcacctcgtccgggagagcgccgatgcggtcgcgttcgcctccgcctccgcctccgcctccgctcgccgcagccgctttcttggccttattctttggaggaggcattacgtcgaacaggtggcggggggtcacctccggaactag |
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Protein seq | MAPRPAQHARTDGPLRLEEGEDVVEHLVRESADAVAFASASASASARRSRFLGLILWRRHYVEQVAGGHLRN |
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Function | - |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsLima_11g0008100 | OsLima_11g0008100.01 | Chr11 | 7081113 | 7081331 | + | NAM | ||
CDS seq | atggcgccacggccggcccagcacgcacgaacggacggacccctgcgcctggaggaaggagaggatgtggtggagcacctcgtccgggagagcgccgatgcggtcgcgttcgcctccgcctccgcctccgcctccgctcgccgcagccgctttcttggccttattctttggaggaggcattacgtcgaacaggtggcggggggtcacctccggaactag
More
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Protein seq | MAPRPAQHARTDGPLRLEEGEDVVEHLVRESADAVAFASASASASARRSRFLGLILWRRHYVEQVAGGHLRN |
Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0.0 | 0.0 | None |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0209450 | SBH | 0.0 | 0.000000 | 0.0 |
Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
Nipponbare | IRGSP 1.0 | RAP-db | Os11g0209450 | SBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0008250 | SBH | 0.0 | 0.0 | 0.0 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0008150 | SBH | 0.0 | 0.0 | 0.0 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0006790 | SBH | 0.000000 | 0.000000 | 1.522064 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0007980 | SBH | 0.0 | 0.0 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0006710 | SBH | 0.0 | 0.0 | 0.000000 |
Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0008170 | RBH | 0.0 | 0.0 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0006810 | SBH | 0.0 | 0.0 | 0.000000 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |