Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsLima_11g0008100 OGI:11015520 | 4/16 LIMA | Os127564RS1 | Gramene(+IsoSeq) Chr11:7081113-7081331
Gene Symbol -
DNA seq

atggcgccacggccggcccagcacgcacgaacggacggacccctgcgcctggaggaaggagaggatgtggtggagcacctcgtccgggagagcgccgatgcggtcgcgttcgcctccgcctccgcctccgcctccgctcgccgcagccgctttcttggccttattctttggaggaggcattacgtcgaacaggtggcggggggtcacctccggaactag

CDS seq

atggcgccacggccggcccagcacgcacgaacggacggacccctgcgcctggaggaaggagaggatgtggtggagcacctcgtccgggagagcgccgatgcggtcgcgttcgcctccgcctccgcctccgcctccgctcgccgcagccgctttcttggccttattctttggaggaggcattacgtcgaacaggtggcggggggtcacctccggaactag

Protein seq

MAPRPAQHARTDGPLRLEEGEDVVEHLVRESADAVAFASASASASARRSRFLGLILWRRHYVEQVAGGHLRN

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsLima_11g0008100 OsLima_11g0008100.01 Chr11 7081113 7081331 + NAM
CDS seq

atggcgccacggccggcccagcacgcacgaacggacggacccctgcgcctggaggaaggagaggatgtggtggagcacctcgtccgggagagcgccgatgcggtcgcgttcgcctccgcctccgcctccgcctccgctcgccgcagccgctttcttggccttattctttggaggaggcattacgtcgaacaggtggcggggggtcacctccggaactag

More
Protein seq

MAPRPAQHARTDGPLRLEEGEDVVEHLVRESADAVAFASASASASARRSRFLGLILWRRHYVEQVAGGHLRN

Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_11g0209450 SBH 0.0 0.000000 0.0
Nipponbare | IRGSP 1.0 | MSU NA NA NA NA NA
Nipponbare | IRGSP 1.0 | RAP-db Os11g0209450 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_11g0008250 SBH 0.0 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_11g0008150 SBH 0.0 0.0 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_11g0006790 SBH 0.000000 0.000000 1.522064
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_11g0007980 SBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Minghui 63 | MH63RS3 | HZAU NA NA NA NA NA
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_11g0006710 SBH 0.0 0.0 0.000000
Zhenshan 97 | ZS97RS3 | HZAU NA NA NA NA NA
LIMA | Os127564RS1 | Gramene(+IsoSeq) NA NA NA NA NA
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_11g0008170 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_11g0006810 SBH 0.0 0.0 0.000000
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) NA NA NA NA NA
N22 | OsN22RS2 | Gramene(+IsoSeq) NA NA NA NA NA
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) NA NA NA NA NA
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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