Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_11g0003430 | OGI:11007840 | 15/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr11:2330641-2334584 | ||||||||
| Gene Symbol | ENA1, OsENA1 | ||||||||||
| DNA seq | ctcataaaatgtacttatattatcaagtgctatatatattaatttcacgagaacagccttggttcagtcagttgcaactataaagtgcaggtacacttttgtaataccgtgccattgctatggacccatatgtcagtgatattaaagtcacctaacttaagtcggagataaagttacctgcaactttaccttcttacacaaacttcacttggctactattgaatctaaaacgtaactaattagtactagacataacattaacatccgctatatgtacaattagtatctttgctataaacccaatatcagctttggcaacatgagtttcaagattgtggcgttacaaccaatgcaatcttcaaagttcagatgtttgccaggtagaatggtatgtacaggtacaaagttcagttccttgccaatttgttcatggttgagctaatagtggtgcttgcactgcttcatgatcaagctgatctggaactgcaactcttgtgcatttggcttctggcttaagcatgaaagaaatgcccaaagatattgcctgcagaagtattcagtcaagtcatgcagttataggcactatttagattcatgaacacacatggaagaattaataggactgaccaagaagaaaccggcaacgaggaaactgaaacctttgcagttgaagggggcttgttctgaaatgaagtaagctgaaacagagttgcagaaaagggagaaatcaaacattcagaatactacatggagttggcgacatggcaatgcaacatttgtaagatgaaacaaaaaaaaattgcttgtttacaggtcagggggctcatgaacaatggtgccaacagtacagctgtggatttcacagttgaaatgaatccttgtgcctttccctgcaaaagtaaagtcaattttatgccaaactttgatcagtaactgagtaaataaagctaagggatatcaagattggatttacaaatcaagaaatatttttttcccttcctgagtttacctggtcagaagagtccactaacccagagatgattgcataagtctgcacatgttcaacaattttgaagtgtattcaaagatttttcaagtgtataattgttacttaaatgcacacaaaacacaaaacatgattcctgattttaatgatgcaaacattgtacatttggcgttttattttgtagttaatatactcagatatctcatatatcacagatcttaaaagttacaggtatatagacatggtgatcacttacagctggtttgaccagaacatagatgacacccaatgaggaagtaagataaggaacctgcataatcagtgtcaaacaaaacaaacaaaaatgttcagtaacgacattagtcactgcagcattttttggacttaaaatttattactgaactatgcgcccaaatacatacccagtaactccatgccaaaccatacaggacagcctagaggaaaaaaaaaggttttagttctgcatctgatatcagtaaaagtgataacaaaaatattagcaaaaagagatgtgatacactcacgtaggcaacagatgcaagtatcccaacgcataggactcccttctcaccaactgtattgataataacagggagtaccaaaatctacaattttacaattttttttttgttaatcaggcaaggcacttaaaggatgattgttttttcgaatataacatcaagcaaaggttattatagactaagtactacctgcgaaaagattgaaccaatgcctactaccataagaatttcagagaactggttcttgtcaaaaccaaatactgacttcagatagtactgcaaataaaggggcgaagaatgaaataaccagtactcttttgaacgcaatgtcgtaaaataaatctgagcatatggttaccattaggacatcactaatgccgatcatgcccaactcgtagaagaaggaaatgtatgtgattctgctaagtgtttcactaacaaaacatgaagatagagaagatcaaaatttgcattagtaggtatctcttgacatcaacaaaatttgcatttgcaattttcaaatgttggtcaagtgtaaatacagaagtctcatcaggctttcttttccagaattattatccgtgaatccgatacttattaattttctttgtgctttgacatgaatcgttacaccattaaattacttagaccataaaggagtctggtgaggaacattaccttctcctgattatgttaatattctccttgatagactcccagcgccgcagtggtaacctgacaaccaaagatgagaacgacatatgctcaaacgaaccagaagaagctctttgaagtgtctcaaccagagatattttcatgtagatgacagaagagatcaacaaagcaaccgagacctgataatgcgtggtttcatacttgtaagaatgacattaattagcataaaaattgaaaaataacattgttgatgaactgtaagaaatcttcatgatataatacctggaaaatccaccgctcgggcagaaacctagagaagccattgcccagagcatgcgaagcagatagtatcccagttatgcagccaaatgcaaatgctctctttgatggatcaaccacatcggcctaattaaattagcagaaaagggaattttaactgtccagcatgcaacgtgcatgactacttgttctcaaaccgcattgtgcatagctatgcaataacaagaaacgctgtcaatttgccgtttgtccaatttggtttaagtttccaggctcaaggagagagttatacgacttggataaagtgaaaccaagagttagcatctgtaattgctctcaccgtgtatgtcactgcgaggctggttatggttccttggcctatcatgaatgacaaagtacgcagaataaggaagatatacacagcaatcttggatttgttgcaggcaagaacacctgcaggaataaacaatatgacaccaattaaagacatatgattaatatcctgtgaaactcatgaaaaccttgacattctaatgtcaaattcctgcaagcagagagactaacacttaactgatataagcttccaaaataagatagaacaggtatagctaccataagggatgatggaagttgaggcagtgagtaggaggagaggcttccggccatattcatcagctagctgccccatcaaagtgtatcctacagccctgaaaatccctcccacctgcattaacacaagagtttccaatcaattgttcactttcagttgtcacttgcacactgattctttcagataaaatcaagaaaatggtcaactccattttcatcaatgaaaatgttatgcatcaatcatatagcataagcattggcaaccagtagtaatataatccctaatgcatcgagtcaaagtttcttctgaaactagcaaaagaaagaaactgaatttaggcatcatcatgtgatttcatttttcagataatgaaaactttagcgaactcagttaattacaccaaggtggtacaattgttccgataatactcccgacctctgcatagctacgatgtatatcactgaacaacaataatgtcttacaggaaaggagggacaccactgcataagagggagatgatcaaatgagagctgaccgtttgatggaggccggtgaggtagatggcctccgggcaggcgatgtcggcgccggggcagagtgctcgggtggtgacgtcgacgagcacaggcaccgtcatctcctcggcgacccagtacatgaccagtccaagcagcaggtgcatcagtggcttcagaaccctcacatctcctcctaccttctcctccatgttcaccttgtctcctcttctgcacctgcacctcaacaaagtgtctcctaatccagtaactgctccctgtttatcttcctaattaatctgttggttttattggcc
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| CDS seq | atggaggagaaggtaggaggagatgtgagggttctgaagccactgatgcacctgctgcttggactggtcatgtactgggtcgccgaggagatgacggtgcctgtgctcgtcgacgtcaccacccgagcactctgccccggcgccgacatcgcctgcccggaggccatctacctcaccggcctccatcaaacggtgggagggattttcagggctgtaggatacactttgatggggcagctagctgatgaatatggccggaagcctctcctcctactcactgcctcaacttccatcatcccttatggtgttcttgcctgcaacaaatccaagattgctgtgtatatcttccttattctgcgtactttgtcattcatgataggccaaggaaccataaccagcctcgcagtgacatacacggccgatgtggttgatccatcaaagagagcatttgcatttggctgcataactgggatactatctgcttcgcatgctctgggcaatggcttctctaggtttctgcccgagcggtggattttccaggtctcggttgctttgttgatctcttctgtcatctacatgaaaatatctctggttgagacacttcaaagagcttcttctggttcgtttgagcatatgtcgttctcatctttggttgtcaggttaccactgcggcgctgggagtctatcaaggagaatattaacataatcaggagaagtgaaacacttagcagaatcacatacatttccttcttctacgagttgggcatgatcggcattagtgatgtcctaatgtactatctgaagtcagtatttggttttgacaagaaccagttctctgaaattcttatggtagtaggcattggttcaatcttttcgcagattttggtactccctgttattatcaatacagttggtgagaagggagtcctatgcgttgggatacttgcatctgttgcctacgctgtcctgtatggtttggcatggagttactgggttccttatcttacttcctcattgggtgtcatctatgttctggtcaaaccagctacttatgcaatcatctctgggttagtggactcttctgaccagggaaaggcacaaggattcatttcaactgtgaaatccacagctgtactgttggcaccattgttcatgagccccctgacctcttacttcatttcagaacaagcccccttcaactgcaaaggtttcagtttcctcgttgccggtttcttcttggcaatatctttgggcatttctttcatgcttaagccagaagccaaatgcacaagagttgcagttccagatcagcttgatcatgaagcagtgcaagcaccactattagctcaaccatga
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| Protein seq | MEEKVGGDVRVLKPLMHLLLGLVMYWVAEEMTVPVLVDVTTRALCPGADIACPEAIYLTGLHQTVGGIFRAVGYTLMGQLADEYGRKPLLLLTASTSIIPYGVLACNKSKIAVYIFLILRTLSFMIGQGTITSLAVTYTADVVDPSKRAFAFGCITGILSASHALGNGFSRFLPERWIFQVSVALLISSVIYMKISLVETLQRASSGSFEHMSFSSLVVRLPLRRWESIKENINIIRRSETLSRITYISFFYELGMIGISDVLMYYLKSVFGFDKNQFSEILMVVGIGSIFSQILVLPVIINTVGEKGVLCVGILASVAYAVLYGLAWSYWVPYLTSSLGVIYVLVKPATYAIISGLVDSSDQGKAQGFISTVKSTAVLLAPLFMSPLTSYFISEQAPFNCKGFSFLVAGFFLAISLGISFMLKPEAKCTRVAVPDQLDHEAVQAPLLAQP |
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| Function | Hippocampus abundant transcript 1 protein [UniProtKB/Swiss-Prot:Q96MC6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_11g0003430 | OsLima_11g0003430.01 | Chr11 | 2330641 | 2334584 | - | NAM | ||
| CDS seq | atggaggagaaggtaggaggagatgtgagggttctgaagccactgatgcacctgctgcttggactggtcatgtactgggtcgccgaggagatgacggtgcctgtgctcgtcgacgtcaccacccgagcactctgccccggcgccgacatcgcctgcccggaggccatctacctcaccggcctccatcaaacggtgggagggattttcagggctgtaggatacactttgatggggcagctagctgatgaatatggccggaagcctctcctcctactcactgcctcaacttccatcatcccttatggtgttcttgcctgcaacaaatccaagattgctgtgtatatcttccttattctgcgtactttgtcattcatgataggccaaggaaccataaccagcctcgcagtgacatacacggccgatgtggttgatccatcaaagagagcatttgcatttggctgcataactgggatactatctgcttcgcatgctctgggcaatggcttctctaggtttctgcccgagcggtggattttccaggtctcggttgctttgttgatctcttctgtcatctacatgaaaatatctctggttgagacacttcaaagagcttcttctggttcgtttgagcatatgtcgttctcatctttggttgtcaggttaccactgcggcgctgggagtctatcaaggagaatattaacataatcaggagaagtgaaacacttagcagaatcacatacatttccttcttctacgagttgggcatgatcggcattagtgatgtcctaatgtactatctgaagtcagtatttggttttgacaagaaccagttctctgaaattcttatggtagtaggcattggttcaatcttttcgcagattttggtactccctgttattatcaatacagttggtgagaagggagtcctatgcgttgggatacttgcatctgttgcctacgctgtcctgtatggtttggcatggagttactgggttccttatcttacttcctcattgggtgtcatctatgttctggtcaaaccagctacttatgcaatcatctctgggttagtggactcttctgaccagggaaaggcacaaggattcatttcaactgtgaaatccacagctgtactgttggcaccattgttcatgagccccctgacctcttacttcatttcagaacaagcccccttcaactgcaaaggtttcagtttcctcgttgccggtttcttcttggcaatatctttgggcatttctttcatgcttaagccagaagccaaatgcacaagagttgcagttccagatcagcttgatcatgaagcagtgcaagcaccactattagctcaaccatga
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| Protein seq | MEEKVGGDVRVLKPLMHLLLGLVMYWVAEEMTVPVLVDVTTRALCPGADIACPEAIYLTGLHQTVGGIFRAVGYTLMGQLADEYGRKPLLLLTASTSIIPYGVLACNKSKIAVYIFLILRTLSFMIGQGTITSLAVTYTADVVDPSKRAFAFGCITGILSASHALGNGFSRFLPERWIFQVSVALLISSVIYMKISLVETLQRASSGSFEHMSFSSLVVRLPLRRWESIKENINIIRRSETLSRITYISFFYELGMIGISDVLMYYLKSVFGFDKNQFSEILMVVGIGSIFSQILVLPVIINTVGEKGVLCVGILASVAYAVLYGLAWSYWVPYLTSSLGVIYVLVKPATYAIISGLVDSSDQGKAQGFISTVKSTAVLLAPLFMSPLTSYFISEQAPFNCKGFSFLVAGFFLAISLGISFMLKPEAKCTRVAVPDQLDHEAVQAPLLAQP
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.511531 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0151500 | RBH | 0.0 | 0.0 | 0.163874 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g05390 | RBH | 0.0 | 0.0 | 0.039675 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0151500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0003550 | RBH | 0.100463 | 19.773909 | 0.335382 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0003620 | RBH | 0.247671 | 9.564509 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0003520 | RBH | 0.000000 | 13.204725 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0003470 | RBH | 0.0 | 0.093063 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0003450 | RBH | 0.0 | 43.068619 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0044300 | SBH | 5.8615475 | 23.507117 | 7.9279895 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0003540 | RBH | 0.0 | 1.838116 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0043900 | RBH | 0.44652 | 1.6187395 | 0.1976815 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0003540 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0003540 | RBH | 0.0 | 41.442139 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0003480 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0003550 | RBH | 0.0 | 13.724948 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G003540 | RBH | 0.0 | 1.403255 | 0.603851 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0003530 | RBH | 0.0 | 29.515572 | 0.000000 |
