Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_10g0014170 | OGI:10056190 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr10:19896001-19898215 | ||||||||
| Gene Symbol | NAC120, ONAC120 | ||||||||||
| DNA seq | GAAGAAGAGATCATATTTAGCTATATCTCTAGCTAGCTGCGTCTCGTCTTCTCCAAGCTATTGTTACTTAGCTAGCTTAGCTAGGAGAGTAAAAGATCGAGTGATCATTAGTGAGTTTGATTAGTTGATTTTGTTGGGGTTGAGATCGATGGCCGGGCTGAGGGAGATGGAGTCGACGCTGCCACCGGGGTTCAGATTCTGCCCCAGCGACGAGGAGCTCGTCTGCTTCTACCTCCGCAACAAGGTCGCCAACCACCGCGTCGCCTCCGGCACCCTCGTCGACGTCGACCTCCACGCCCGCGAGCCATGGGAGCTTCCCGGTAACCTTACCCTACAGACCTACTTTGTCCAGACACATAGTCAGAAGTACTGTATTTTTTTTTTTTACAATGAATTGAGATCGGGTGTGAAATTTCACTGTACACAAGAGAGATACAGTGTTGGTGCCTTGATAATTGTTTGATAATTAGTTAATCATTTGGGGTTCCTTGGAGCACAAGCATATAGCTATAGGTGTAGATAGATAGATACAGAATGTGCACGAGATGATCATCAGCTAGCTATTATAGCTTGCAAGCAATCATAAAATTAGCGGCAATAATTTCGTGATGGTTCCTTGGCTAGCTAGCTCACAAGTCACAAGACTCCAAGTCTCGCAAGCTAGAGACCAATAACGACCTGTTTATATGTCCACTTCTAGCTAGCTAGGGCCACTCAGAGAATTATAAAAACGTCACTGTTTGCCAGTAACAGTGACCGCTGTAACACTTCACGTGCAAGCGTATCCAATCCCTCTCTCATGATCTCACGTACCTAGCTCTACAGTGTAGGTACAGATACATCTGAACAGTTAATTAGTATCTCTAATGTATATTATTATTAACTTTGATGCTTTAATGAAGGGTGTAACATAGCACTAAATGGTTATTAATTAGCTGGTGATTGGATGCATATGAGAGCTTAATTAGTTTTTATTTTGTTTTCTTTTTCAGAGGTGGCTAAGCTCACTGCGGAGGAGTGGTACTTCTTCAGCTTCAGAGACCGGAAATACGCGACAGGGTCACGGACGAACCGTGCGACCAAGACAGGTTACTGGAAGGCCACAGGGAAGGACCGGATTGTCCATGAGGGTACAACACGAGCGGTGGTCGGGATGAGGAAGACGCTAGTTTTTTACCTCGGCCGTGCCCCTAATGGGCAAAAGACGACATGGGTCATGCATGAGTTCCGCCTTGAAACACCTAACTCCCAACCTAAGGTGTGTGCCTTAGCTCTATATTACCTTTCTCGTAGAAATATTTTTCAATAGCTAAGCACTACTACTTAATTTGGTGTGCTCAGATTCACATAATAATTAATCATGGTCTATATATTCTTTTGTGTCAAGCAGGAGGATTGGGTGCTATGTAGGGTGTTTGACAAGAAGAAGCCATCGACAATAGAAGCCGAGGGTGGCGGAAGCAGTGGCAGCGACCTTTTCATTCCCGGTGCCACCGATGGCTCTACTGACCCCTCCTCGCCGACGACGATGGCACCTCTCCTTGGCTCATCGCCCGATCCGACAGTGGTGGACAGGTTCGACCACCGGTCAGCGGCGGTGCCACCATTAATGGTACTCATGCAAGGTGGTGGGGACCAAATGATCAGTGGTAGCGGTGTCCACTGCAGCAACAACGACAACTCCGGTAGTAGCAGCGCACTGCTTAACCTGACGATGCTGCAATACAGCTTCCTAGAACATCGGCCAACTGGTGACGACATGGCGGTGGGGGCCCACTTTGGAACATGCCAGGGTGGCAACAACGATGCCACGATGGCACTTCGGATGGGGTTTGAGGAGCATGGCATGGGAGAGATCATAGAGATGGAACCAGCATGGCGCCAAGGTGGTAGCAACTGCGTGTACAGGGACGAGCTCTACTTCTAGCAGAAGTAGTACAATGGATTAATATTAATGATTTGCATGTGTTAGAGTTCAGTTAAATTCAGAAAATATGTAGAGCTTAGAAGAGGTTTGCTAGTTTGTGATTAGAGTGTGATTATTAATTAAGGTGGAGTTGAATTAAGGGGTCGATTAGTTCGAGTGGTCGTGATATGCAAATATTTGTGTAATTACTCAGTTTGTAGGTGAGCCATATATCAAACAACTTTAGGGAAAGGGGATGATCAAGAATTCAGAACCAGGATGAATTTGATATTCTTGTACTTTAAAATT
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| CDS seq | ATGGCCGGGCTGAGGGAGATGGAGTCGACGCTGCCACCGGGGTTCAGATTCTGCCCCAGCGACGAGGAGCTCGTCTGCTTCTACCTCCGCAACAAGGTCGCCAACCACCGCGTCGCCTCCGGCACCCTCGTCGACGTCGACCTCCACGCCCGCGAGCCATGGGAGCTTCCCGAGGTGGCTAAGCTCACTGCGGAGGAGTGGTACTTCTTCAGCTTCAGAGACCGGAAATACGCGACAGGGTCACGGACGAACCGTGCGACCAAGACAGGTTACTGGAAGGCCACAGGGAAGGACCGGATTGTCCATGAGGGTACAACACGAGCGGTGGTCGGGATGAGGAAGACGCTAGTTTTTTACCTCGGCCGTGCCCCTAATGGGCAAAAGACGACATGGGTCATGCATGAGTTCCGCCTTGAAACACCTAACTCCCAACCTAAGGAGGATTGGGTGCTATGTAGGGTGTTTGACAAGAAGAAGCCATCGACAATAGAAGCCGAGGGTGGCGGAAGCAGTGGCAGCGACCTTTTCATTCCCGGTGCCACCGATGGCTCTACTGACCCCTCCTCGCCGACGACGATGGCACCTCTCCTTGGCTCATCGCCCGATCCGACAGTGGTGGACAGGTTCGACCACCGGTCAGCGGCGGTGCCACCATTAATGGTACTCATGCAAGGTGGTGGGGACCAAATGATCAGTGGTAGCGGTGTCCACTGCAGCAACAACGACAACTCCGGTAGTAGCAGCGCACTGCTTAACCTGACGATGCTGCAATACAGCTTCCTAGAACATCGGCCAACTGGTGACGACATGGCGGTGGGGGCCCACTTTGGAACATGCCAGGGTGGCAACAACGATGCCACGATGGCACTTCGGATGGGGTTTGAGGAGCATGGCATGGGAGAGATCATAGAGATGGAACCAGCATGGCGCCAAGGTGGTAGCAACTGCGTGTACAGGGACGAGCTCTACTTCTAG
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| Protein seq | MAGLREMESTLPPGFRFCPSDEELVCFYLRNKVANHRVASGTLVDVDLHAREPWELPEVAKLTAEEWYFFSFRDRKYATGSRTNRATKTGYWKATGKDRIVHEGTTRAVVGMRKTLVFYLGRAPNGQKTTWVMHEFRLETPNSQPKEDWVLCRVFDKKKPSTIEAEGGGSSGSDLFIPGATDGSTDPSSPTTMAPLLGSSPDPTVVDRFDHRSAAVPPLMVLMQGGGDQMISGSGVHCSNNDNSGSSSALLNLTMLQYSFLEHRPTGDDMAVGAHFGTCQGGNNDATMALRMGFEEHGMGEIIEMEPAWRQGGSNCVYRDELYF |
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| Function | NAC domain-containing protein 21/22 [UniProtKB/Swiss-Prot:Q84TE6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_10g0014170 | OsLima_10g0014170.01 | Chr10 | 19896001 | 19898215 | + | NAM | ||
| CDS seq | ATGGCCGGGCTGAGGGAGATGGAGTCGACGCTGCCACCGGGGTTCAGATTCTGCCCCAGCGACGAGGAGCTCGTCTGCTTCTACCTCCGCAACAAGGTCGCCAACCACCGCGTCGCCTCCGGCACCCTCGTCGACGTCGACCTCCACGCCCGCGAGCCATGGGAGCTTCCCGAGGTGGCTAAGCTCACTGCGGAGGAGTGGTACTTCTTCAGCTTCAGAGACCGGAAATACGCGACAGGGTCACGGACGAACCGTGCGACCAAGACAGGTTACTGGAAGGCCACAGGGAAGGACCGGATTGTCCATGAGGGTACAACACGAGCGGTGGTCGGGATGAGGAAGACGCTAGTTTTTTACCTCGGCCGTGCCCCTAATGGGCAAAAGACGACATGGGTCATGCATGAGTTCCGCCTTGAAACACCTAACTCCCAACCTAAGGAGGATTGGGTGCTATGTAGGGTGTTTGACAAGAAGAAGCCATCGACAATAGAAGCCGAGGGTGGCGGAAGCAGTGGCAGCGACCTTTTCATTCCCGGTGCCACCGATGGCTCTACTGACCCCTCCTCGCCGACGACGATGGCACCTCTCCTTGGCTCATCGCCCGATCCGACAGTGGTGGACAGGTTCGACCACCGGTCAGCGGCGGTGCCACCATTAATGGTACTCATGCAAGGTGGTGGGGACCAAATGATCAGTGGTAGCGGTGTCCACTGCAGCAACAACGACAACTCCGGTAGTAGCAGCGCACTGCTTAACCTGACGATGCTGCAATACAGCTTCCTAGAACATCGGCCAACTGGTGACGACATGGCGGTGGGGGCCCACTTTGGAACATGCCAGGGTGGCAACAACGATGCCACGATGGCACTTCGGATGGGGTTTGAGGAGCATGGCATGGGAGAGATCATAGAGATGGAACCAGCATGGCGCCAAGGTGGTAGCAACTGCGTGTACAGGGACGAGCTCTACTTCTAG
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| Protein seq | MAGLREMESTLPPGFRFCPSDEELVCFYLRNKVANHRVASGTLVDVDLHAREPWELPEVAKLTAEEWYFFSFRDRKYATGSRTNRATKTGYWKATGKDRIVHEGTTRAVVGMRKTLVFYLGRAPNGQKTTWVMHEFRLETPNSQPKEDWVLCRVFDKKKPSTIEAEGGGSSGSDLFIPGATDGSTDPSSPTTMAPLLGSSPDPTVVDRFDHRSAAVPPLMVLMQGGGDQMISGSGVHCSNNDNSGSSSALLNLTMLQYSFLEHRPTGDDMAVGAHFGTCQGGNNDATMALRMGFEEHGMGEIIEMEPAWRQGGSNCVYRDELYF
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.820664 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0477600 | RBH | 0.0 | 0.0 | 0.409834 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g33760 | RBH | 0.0 | 0.0 | 0.101659 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0477600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0014560 | RBH | 0.0 | 9.801973 | 6.650079 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0014800 | RBH | 0.0 | 0.000000 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0014260 | RBH | 0.0 | 5.512580 | 6.843812 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0014610 | RBH | 0.0 | 0.248888 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0014490 | RBH | 0.0 | 6.121367 | 5.803764 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0295400 | RBH | 0.7350635 | 1.398221 | 0.593093 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0014470 | RBH | 0.0 | 0.532982 | 0.304558 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0317700 | RBH | 2.434264 | 0.418582 | 0.0882945 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0019610 | SBH | 0.0 | 0.506098 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0014070 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0014490 | RBH | 0.0 | 16.125292 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0014200 | RBH | 0.0 | 0.0 | 0.163038 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0014740 | RBH | 0.0 | 1.915420 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G014430 | RBH | 0.0 | 0.627821 | 0.726567 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0014380 | RBH | 0.0 | 0.000000 | 2.456055 |
