Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_10g0009360 | OGI:10043890 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr10:15098995-15111426 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | tccggttaaaaaagatctgcgcttggatgggccgtaaaagcctcttcgcctcctcatctcgccgcattgcccaagaccagccctgccacgtgcgcagccaccggcgagtcggcggcgacctcgctctccggcctTCtccccccctcgccatcgccggccgcgatgcgcaactccggcgaactgatcctcccgggttgcccgcctccgatccgcgtcttctcagcctccattcaccgtcggtgtggtggcttggcttcgctcgcatcacctcacctcgccctcgtcgctggcgtcgctcagattcgatccaccttctgatgatccccttcccccaaatcaatagtcctgttccatttgttttttcggtcttgaactattagattgttcctctgattcttgatgctagtatatttatttatagctgtatagtttcaacttaatgtgcactgcatatttatgatggataatgcaatgttcatggcttgatgcaaccacagagttattaagacctttgttgatgttcttctcccaaacagcatgtatacaagggggtttgattttcatttcactgttacctttggtaaccaacaattgcagtggtaagtttattaagggttaaaattttccagtttatcccaagcaggccagttatttagtagttttaatccagtgcaattaaaagaagttaccctactactacattttccttcttccactgtgtgattgtttttttggtcgtgtgtgctttggtgtagaagccggatgctttcattttctaaatgaaatccccataatctagtatcagtgtactaaaggaaaataatactacagatacaactttctactatggtataacccgtttacagacgagaaaccgatgtgtgatcgcacgaagataagcacaataacccttttccaccttttccctttgattagtgaatctttatgttattcttgtttttgatgcttttcacacgAagataaccttttcTttttgtacagaataaccaaagcaaaagaagagtggttgagtgcatgtcggagagagtgtgtgcctatattcctgaggattgatgttgtggcaaggtagctgggcaggacaggcatcggttccatgctctagtttcaaggaagacatcgctccaagtgcacggtggctgcttttgctgcgataatcccataacatacatcaacggagccgaccgatgtaagaagccaacattaaacactgctagttaccagcagagccaccctgaaaagctgaaagcaagaaaaaatctgagagaagagcaagctgacatacatcatggagatgatcctggatgcccttgcatcctacctcggcgagcagttcgccaagatggtgaaagacgaggcagggatgctgcttggcgcttctggcgaggtcgagaagctgacaggcacgctgagcaggctcaagaagttcctggccaacgcggagaggcggcacatcaccgatgccaaggaaggagaatatgtgcatgagtgggtgaggaagctcaaggatgccatgtacgacgccaccgacatcgtcgatgacgttcatctcaagtcggagcagcggcgcgagcggtatgcgtctccgtatccaggcagctgctccaactcctccttgctctggtgcttgcaggatcccctcttcgcccacaggatcggaagccgagtgaaggagctcaatgagaggatggatggcctcttcaagcaggctgaagctgaccagcaggctgacactgaccgactcaaatccagctcaacccctggcaaccctcatagtggcaaccctaggaggacagcccccgggatcatccacgaagacatcgtcggtgacaagattgaagaagataagaggatgctggtggactggctcatcaaccatgacaagaagtatctggtggttgccatccaaggcgtcggtgggatcggcaagaccacccttgccaagaagatcttccatgatcaggcgattcaagacacctttgatgtaaagatatggttgagtgtcactcaggacttcaatgaggctcatcttctcaaaaccgccattgccatggcaaagtcagataagcaacaaatccctgccgttgaagacatggccctgcttgaggatgccctggtggaagccctgagaggtaagatgctgttgctggtaatggacgacatgtggactgagaaggcatgggacaatgggctcagagtcccaatcactgaagcctgtgctccagggacttgtgtccttgtaaccacaagaaatgaagatgttgctaaagtgatgaaagctgctcacacgcaccaagtcaccaaactaagactcgatgattcctggacattgctccagaaacaggttagggcagcagatctattaattatatgactctgcttgatagctagctcattcaatatcatggttagctctgcacacacaagaaaagaatatcatggttagctaggtacttcttttctaatcaagcttggtcagtatgactcctgttttataaatgtttctgtgtcacattccttttgtagtcaatccggcttcatcaaagtcaagcagtgtacgtaatcaataaaactagtaagattacctctgcacgttttacagatattaccggacataggtggtaaaggtggttccatgagaacttctgaaaaattcgtcccaatttttgtcttcaacgcacagaaagaatcgtgtaatccatttttttacttaaaacagcaggagagcctcttactgtgctatattaatatatagataatacttacactatatttactaccacggggcagattaatagtactgcacaggtttcactctttaggtttctcttaatttgggattcaatttccatgaggaaaatttttattgaattatatacacaagccagttcaccaaaaactcaattttcctcatatttcaatgctgttttcgaggaaaaaaactcacacttgaatgctttcctattatgtaggaataagtcttggctggttggtcttggtcttgtggtgctttttcttgctttttagctttctaggacagcatctctactttcagtttggatgctctaggacagctaggacagcagtttgttgagatgctctaggacagtttgttgggatgctctaggacagtttgttgagatgctctaggacagcaccctattgccctagcatggctgctacaagcagctataaatatgtacccaatcctctttgggaggatatggctttgtgttttgtgaataaagaaaaccagaaaattgccccatctcgagtgccatcctcttctcaatgagagtaaccattgaaattctaacatctggtatcagagccacactttcctgtaggctaaacatctcttgttccaccccttcccaagctcggttgagctctcagccagcagcagcagcaccggctgctcctccttccccgttcccttccccctctccaggcagcagccccccggaggtgcgccatgtccgacgttcggtctcggcgttcggtcgcctcgagcactcggcgtcagcaggacgccgagctcgccgcagtagaagagcgcaggcgagcaacggcttagaccgctgcagcagcagtgagggcggccagactggcggcaacggagttggcagcagccagggcggaggcggaagcagaggcggcggaagatgcggcacgtgtggcggaggtagaggttgaaaccttgcgcagtagcatcaacggctccatcactggcgacagcaccgccgacagggagcttgaggagctggcaagaggaagggcacgggagcgggcagagcggtgggcagcagcccacctccacggcggcggcccaagggaccacgcgcccgccgatgggaacccagacgggcgcgggcgtgccggcggcagcccggagcccacgcgcggccttcgcaggcagcgcggctctccctcccctgaccgacgccatggccaccacggcgtccagacggaggtcagggactttggtcccggctgtgggtggcctaccctcaccaaaaccaactacattgagtgggccgtggtgatgagggtgaggctccaggttcagcacatgtgggaggcagtccggtatggctacgtcgactacgacgaggatcggcgggcactggatgccctcatcgctgtagtcttgcccgagatgcagttcttgctttcccagaagcggactgccaaggaggcctgggacgccatcgttgcggcacgcatcggcagcgaccgcgcccgcaagtccacactgcaggcactccgcaaggagtgggagaacctggccttcaagccaggtgaggatgttgatgactttgcccttcgtctcaacactcTtttgcagaagatggtgtagtacggtgacgacacctacgacgaggagagagctgtcgagatgctcttccgctgcgtcccagagaagtacaggcagatcgctcgctcgatcaagtctctgctggacctctccacgatgtcgatcgaggaggcgttaggtcgcctcaaggtcgtcgacggtgatgagccacagcccctctcggggcctatcaccattggcgggaagctccatttcactcgggagcagtgggaggcctctcagggtgacgggatgaagggggagtcttctccctcgacaggcggccgcaagccgcgcaaggcgtgtggaggtgtccagctgggcgcgaagacgcgccgagggtggtgctcgcagaggcgcccagggcggcgccgccggcaaccacaagccggcacgagacgactcctgccgcaactgtggcaagcttggccattgggccaaagactgtcgacagccacgacgtggccaggcccacatcgcacaggtagaggaggaagagccggctctgctcctggcacacgcaagcatcgagctacccccagcgacaccggccacagcggcttTCCtccaccttgatgagccgaaggtgctcgtctccctctgcaacagctccagcaatgacaaggctgatgggtggtacctcgacaccggtgccacccatcacatgatcggccgacgggagttcttcaccgagcttgaccccagcgtccgaggctccgtcaagtttggggacgcctccggcgtggagatcaagggcgtcggctccgtcaccttcatcgccaagtccggtaagcacaggctgctcaccggagtctactacatccccgcgttaaggaactctatcatcagcgtggggcagctggatgagaacggctcacacgtgttggtcaagcacggagtcatgaggatttgggatcgccgccgtcgccttcttgccaaggtaaccagaagcactaatcgactctacatcctcagcgcgcaggtcgcacaaccagtttgctcgccgctcgtcgggacgacgaggcgtggcagtggcacaagcgtttcgggcacctccactttgaggccctgaagcggctcagcgccaaggagatggtgtgaggcctgccatgccttgaccacgtggagcagctctgcgacgtctgcgtggtgacgaagcagaggcggctccccttgccccagcagatgagcttccgagccaaggagcggctcgagctcgtgcacggggacttgtgtggcctagtgacaccggccacaccaagaggacgacgttacttcctgctgctcgtcgacgacctctcccgctacatgtgggtgatggtcctcggcagcaagggagaagctgcggacgccatcaggcgcgcgtaggctgctgcagaggcggagtgcggccgcaagctgcgcgtgctgcgcaccgacaacggcggcgaattcatggcggctgaattcgtgtcgtactgcgttgatgagggcattcaGcgccactacaccgcgccgtacagctcgcagcagaacggcgtcgtcgagcggcgcaaccagacggttgtggggatggctcgggctctcctcaagtagagggggatgccggccatcttctggggagaggcggtggtgacggccgtctacatcctcaaccgctcgcccacgaaggccctcgacggcaggacaccgtacgaggcctggcatgggcgcaagccggcggtctcccacctgcgggtcttcggctgcctcgcgttcgccaaggagtttggccacatcggcaagctcgacgacaggagcaccccaggggtgttcatcggctacgcggagggctcgaagacctaccgcattctcgacccggagacacagcgtgtgcgcacggcgcgcgacgtagtgttcgacgaagggcgagggtgggtatgggacaaggcggtggacgatggttcgactctgacgtacaacttcactgtcgagtacgtccacttcgagggagctgggggagtaggcagctcttcctcaccgagcgtgcctaccccagtccccgagcctccaccaactccggcagcgacacattctcgagcttcgacttccgctacgacgacttcttcaccagcaccaccacagccggcgaccccacgcactccagcaccaacagccactcccctgggcatgtctactccgacgccagctcgtgttgagcgcagcctggtggagttagctactccgctctccacgacggggagcgcatcgatgcgtaccacgacggcgagcagctccggtaccgtacgatggaggaccttctcggcgaccagccggtgccgggactggtgccccgcgacctggaggcgcagttgcaccttgcgtgcgacgatggtgagcctcggtcttttgcagaggccgagaaacacgccgcgatgtagtcggagatggacgcggttcaggagaactgcacctgggagcttgctgacctccctcgtggtcaccgcgcgatcacccttaaatgggtgttcaagctgaagagggatgaagccggagccatcgtcaagcacaaggctcgcttggtggcacgcggtttcgtgcaacaggaggggatcgactacgacgatgcctttgctcccgtggcacggatggagtccgtgcgactccttgcgctggctgctcaggaaggctggggcgtccatcacatggacgtcaaatcggcgtttctgaacggcgacttgaaggaggaggtctacatacaccagccaccgggatttgtgatccccggcaaggagggcaatgtgctacgcttgcacaaggccctttacggcttgcggcaggcaccgagggcgtggaatgccaagttggattccacgctcaaggggatgggcttcgagcaaagcccgcacgaggcggccatctaccagcggggcaatggaggaaatgccttgctggtgggtgtctacgtcgacgacttgatcaccggcaccaagaatgaggaggtcgcggtgttcaaggagtagatgaaggccaccttccagatgagtgatctggggcctctctctttctacctgggaattgaggtgcaccaggatgactccgggatcacgcttcgacagaccgcatacgccaagcgcgtcgttgagctggctgggctcaccgattgcaacccagctctcactccgatggaggagagactgaagctgagccgcgatagcacgacggaggaagtggatgctacacagtaccggcgtcttgtggggagccttcgctacctcacccacacacggccggacttggccttctctatcggctacgtcagtcggttcatgcagcgaccgacaacggagcaccagcaggctgtgaagaggatcatctgctacgttgcggggactctcgaccacggtctctactacccaaggtgtcctggcaaggcacacttcgtcgggtacagcgacagcgaccacgccggcgacatcgacaccagcaagagcacgagcgggattctcttcttccttggcgagtgccttgttagctggcagtcagtcaagcagcaggtggtggccctgtctagttgcgaggccgagtacatggcggcctccgccgcttcgacctaagcgctctggcttgctcgactgcttagtgatctcctcggcagagatactggagcggtggagcttagggtggatagcaagtccgctctggccctggcaaagaaccccgtttttcacgaacggagcaagcacatccgggtgaggtaccacttcatccgaagctacttggaggaagggagcatcaaggcgagctatatcaacaccaaggaccagcttgcggatttgctcaccaagccccttgggaggatcaagttccttgagctttgctcccggatcgggatggctcaactttcccacaagacgacgcacaagacttagggggagagtgtaggaataagtcttggctggttggtcttggtcttgtggtgctttttcttgctttttagctttctaggacagcatctctactttcagtttgaatgctctaggacaactaggacagcagtttgttgagatgctctaggacattttgttgggatgctctaggacagtttgttgggatgctctaggacagcaccctattgccctagcatggctgctacaagcagctataaatatgtacccaatcctctttgggagaatatggctttgtgatttgtgaatgaagaaaaccagaagattgccccatctcgagtgccatcctcttctcaacgagagtaaccattgaaattcttaacatattatgagcacttcaacactttctgtaatgctgttgcaggttagattcgaactattgaccttttagctctgatataacattgagttctatatgtcagtcagttttgccaagggtatagaatcgaatgaatagcaattattgttgtagcccaaaattgcacctgatgtctccaaaaccatacacatcctgagaaggggttacttgtgatctagctgctgtagtgtggctggactgaataaatcggactaccacaatagtttggaggtaatttggaatttatcctaaatgttaaccatagaaactagattcaaattaataacacttacaactaaattaatctcggtaaatatctcatggagtcatggtggatcgatctaacttatgttctcgaagcatgcttatattattgtctgattgatatgatatatccatatctatcttccatgaaacacgatcatcagagatgatttagaaatagcatcttgatatataaatagtttacaaataagtcatactcacagatcagtataaataattggaagagattcataaaaatgattcgtgatagattgactgcctctatgggcatatcgccaacatggccggcaggataggtggtggcatggttacacaaggtacataagtatatagtgttcttttggatggccaaaatagttgactgaatggtgccttcgatgcatatatccttgattggtggcttgttgaacatctcagatatgtgatttcagcagcacctatgaaataaagtagtttccccttggcaaattatcaaaaatcaaaagtcaccacggcactgttacaagtctggcttatatttcttttaacaaattgtgccttttattttactctagaatgtggaattgttgattaattaaggaacttctataactgtttctcatcatgagaaaagtgagtaagcacaataaggctctctgtaactcaaattttacacaataatgtagacaaggaaataagcacaattattttacacaataatgtttcaagttatggttctattttgctcatattatacgtttttgtttgtctaggctgccttgagtgtatcagagatcgagatagtacaagaatgtgggatgaaaattgcagaaaaatgtgatggtttaccactggcaattaaagtaataggagttgtcttatgcaagaaaaatgcaacaaaaaatgcttgggaagaggttttacgcaatcagatatggtcaaaaatgggacttcctgaagaactaaacaaggcaatatacctgagctatgaagatctgagccataacttgaaacagtgctttgtgtattactcactatttcctaaagatgaaatcattggtattgacaaaattgtttccatgtggatagctgaaggattcattggtaaagatggatattccgcacagtcagctggtctagattactacaaggagttaatcaagaggaatcttttagaacctcagaatgactactacaatgaagaacattgtatcatgcatgatgttgtacactcctttgctcagcatgttgccagggatgaagcactggtgcttcgggacccacaaaacaatggaattctctcttcatcaaaatttcgtcggttatctatatcagcagagcaaatagagtggagcaatttacagaatcagcattgtctaagaacattgatattgttcggaaacatcaagttgaaacctggcgattccttgagaattcttccatctctacggacaatacatgtaaggagttccaatttttctatattgcaggactccttgtgtcaccttaaacatttgagatacttggagctaaggtacacagatatatctgcactgccccgcaacattggtaggatgaagtttttagagcacattggtgttcgtggctgtCAccggttgtcaaaacttcccagcagtatcataaagctagataatttgagacacctcagtattgatgagacaaaaataagagctattccaaggggttttagcagactattaaatttggatgtgctatgggggTTTCCggttcatggtgttgctcagggcactgcaaagcattactgtacattggaagatgTtggccctctttcgcagcttaggaagcttaaattaaaaggtctggagaatgcaccttctaaatcggctgcactagcggaacttggaaccaagagtaggctgacatgcctggagttatggtgctcaaatgatgagaccaaagatgccatcgtcacggttgagcaggaacaaattaaggagttgtttgatctacttcgccctgcagaatgcttagaggagctaactattggaggctattatggtgacacggtcccagattggattaagatgccagaggcagccatttttaaggatttgagacggctaaacctacaaaactTgGTTTCTtgtattcaactcccagatggtttaggtcagctccccaatttggactttttcgtagtcgatgatgcaccctgcatcaagcaaattggacattgcttgctctttgaacaaggacaaagaaatatggacaacaagaagggttcaagacatgttgcatttccaaagttacatgagttgcatcttaaggggatgatggaatggaatgagtggacatgggagaagcatgtggaggccatgcctgttctaagcgtgcttcatgtcaaagactgcaacttgagccatcttcctcctggacttccttaccaggcaagggctttgaagagattatgtgtaataaatgctcggaacctaaactccgtggagggtttcagctcggttgtcaagcttgaagtctatggcgaccctaatctcgagaggattgttgatcttccaagcctgcaaaacctaaccattgtgaactgtccaaagctgatgttgttggatggtgttgcatcagttcagatcatggaacttggggaccacgggatggaaacgctccccgagtacctgcgacatctgacgttacgacatttgaagattgtttgcagcttgaatctgctcaggttgatgtcgaccaagcatgatgcaagcaggtcagagtgggagaagatcagccatatcatgcatgtggagggattcgctagcgataacggcgacggcatcttgagatggtacatgtcctacacaagagatccatacaacctggagacaaacattacaagcagatagctccacaccaccaggtacatgcatggttttgatcattacgagtaaattaactcccctttgccatgcaatacatatggcattctcattatatcaatccagaaactaagcgaactgtaaatttattctctatctgttctatccgtatgtgttcagaaggtgcatcagaataaaatgcgaagttgagggaagaacgcgatcgtgatgggaaggatcaacaggtaaattaatcatgaaatgcctgattcggccaagatgatgcctgctaactcagctcgttgaggatttctcttattcttgtgcacaagaaggtgatggaagaattggcatgggaggcaggaggattgaggccatgaattctatcacacttaaaaatatatcattggcccaggaagtgccaaatttctcagtttttatactcctactacatagcgaaagtactacttacaaaagaaaacactgtaaataagaacagttgtgttcatatgcaaacagaaactatatatattatcagcagaagtaatttatgtcacaaaatttagggcacttttactgttttacactgcccttcaccatgactggcaacaatgcagtgtgacatccggcgtcatcccggaatga
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| CDS seq | atggagatgatcctggatgcccttgcatcctacctcggcgagcagttcgccaagatggtgaaagacgaggcagggatgctgcttggcgcttctggcgaggtcgagaagctgacaggcacgctgagcaggctcaagaagttcctggccaacgcggagaggcggcacatcaccgatgccaaggaaggagaatatgtgcatgagtgggtgaggaagctcaaggatgccatgtacgacgccaccgacatcgtcgatgacgttcatctcaagtcggagcagcggcgcgagcggtatgcgtctccgtatccaggcagctgctccaactcctccttgctctggtgcttgcaggatcccctcttcgcccacaggatcggaagccgagtgaaggagctcaatgagaggatggatggcctcttcaagcaggctgaagctgaccagcaggctgacactgaccgactcaaatccagctcaacccctggcaaccctcatagtggcaaccctaggaggacagcccccgggatcatccacgaagacatcgtcggtgacaagattgaagaagataagaggatgctggtggactggctcatcaaccatgacaagaagtatctggtggttgccatccaaggcgtcggtgggatcggcaagaccacccttgccaagaagatcttccatgatcaggcgattcaagacacctttgatgtaaagatatggttgagtgtcactcaggacttcaatgaggctcatcttctcaaaaccgccattgccatggcaaagtcagataagcaacaaatccctgccgttgaagacatggccctgcttgaggatgccctggtggaagccctgagaggtaagatgctgttgctggtaatggacgacatgtggactgagaaggcatgggacaatgggctcagagtcccaatcactgaagcctgtgctccagggacttgtgtccttgtaaccacaagaaatgaagatgttgctaaagtgatgaaagctgctcacacgcaccaagtcaccaaactaagactcgatgattcctggacattgctccagaaacaggctgccttgagtgtatcagagatcgagatagtacaagaatgtgggatgaaaattgcagaaaaatgtgatggtttaccactggcaattaaagtaataggagttgtcttatgcaagaaaaatgcaacaaaaaatgcttgggaagaggttttacgcaatcagatatggtcaaaaatgggacttcctgaagaactaaacaaggcaatatacctgagctatgaagatctgagccataacttgaaacagtgctttgtgtattactcactatttcctaaagatgaaatcattggtattgacaaaattgtttccatgtggatagctgaaggattcattggtaaagatggatattccgcacagtcagctggtctagattactacaaggagttaatcaagaggaatcttttagaacctcagaatgactactacaatgaagaacattgtatcatgcatgatgttgtacactcctttgctcagcatgttgccagggatgaagcactggtgcttcgggacccacaaaacaatggaattctctcttcatcaaaatttcgtcggttatctatatcagcagagcaaatagagtggagcaatttacagaatcagcattgtctaagaacattgatattgttcggaaacatcaagttgaaacctggcgattccttgagaattcttccatctctacggacaatacatgactccttgtgtcaccttaaacatttgagatacttggagctaaggtacacagatatatctgcactgccccgcaacattggtaggatgaagtttttagagcacattggtgttcgtggctgtCAccggttgtcaaaacttcccagcagtatcataaagctagataatttgagacacctcagtattgatgagacaaaaataagagctattccaaggggttttagcagactattaaatttggatgtgctatgggggTTTCCggttcatggtgttgctcagggcactgcaaagcattactgtacattggaagatgTtggccctctttcgcagcttaggaagcttaaattaaaaggtctggagaatgcaccttctaaatcggctgcactagcggaacttggaaccaagagtaggctgacatgcctggagttatggtgctcaaatgatgagaccaaagatgccatcgtcacggttgagcaggaacaaattaaggagttgtttgatctacttcgccctgcagaatgcttagaggagctaactattggaggctattatggtgacacggtcccagattggattaagatgccagaggcagccatttttaaggatttgagacggctaaacctacaaaactTgGTTTCTtgtattcaactcccagatggtttaggtcagctccccaatttggactttttcgtagtcgatgatgcaccctgcatcaagcaaattggacattgcttgctctttgaacaaggacaaagaaatatggacaacaagaagggttcaagacatgttgcatttccaaagttacatgagttgcatcttaaggggatgatggaatggaatgagtggacatgggagaagcatgtggaggccatgcctgttctaagcgtgcttcatgtcaaagactgcaacttgagccatcttcctcctggacttccttaccaggcaagggctttgaagagattatgtgtaataaatgctcggaacctaaactccgtggagggtttcagctcggttgtcaagcttgaagtctatggcgaccctaatctcgagaggattgttgatcttccaagcctgcaaaacctaaccattgtgaactgtccaaagctgatgttgttggatggtgttgcatcagttcagatcatggaacttggggaccacgggatggaaacgctccccgagtacctgcgacatctgacgttacgacatttgaagattgtttgcagcttgaatctgctcaggttgatgtcgaccaagcatgatgcaagcaggtcagagtgggagaagatcagccatatcatgcatgtggagggattcgctagcgataacggcgacggcatcttgagatgggcacttttactgttttacactgcccttcaccatgactggcaacaatgcagtgtgacatccggcgtcatcccggaatga
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| Protein seq | MEMILDALASYLGEQFAKMVKDEAGMLLGASGEVEKLTGTLSRLKKFLANAERRHITDAKEGEYVHEWVRKLKDAMYDATDIVDDVHLKSEQRRERYASPYPGSCSNSSLLWCLQDPLFAHRIGSRVKELNERMDGLFKQAEADQQADTDRLKSSSTPGNPHSGNPRRTAPGIIHEDIVGDKIEEDKRMLVDWLINHDKKYLVVAIQGVGGIGKTTLAKKIFHDQAIQDTFDVKIWLSVTQDFNEAHLLKTAIAMAKSDKQQIPAVEDMALLEDALVEALRGKMLLLVMDDMWTEKAWDNGLRVPITEACAPGTCVLVTTRNEDVAKVMKAAHTHQVTKLRLDDSWTLLQKQAALSVSEIEIVQECGMKIAEKCDGLPLAIKVIGVVLCKKNATKNAWEEVLRNQIWSKMGLPEELNKAIYLSYEDLSHNLKQCFVYYSLFPKDEIIGIDKIVSMWIAEGFIGKDGYSAQSAGLDYYKELIKRNLLEPQNDYYNEEHCIMHDVVHSFAQHVARDEALVLRDPQNNGILSSSKFRRLSISAEQIEWSNLQNQHCLRTLILFGNIKLKPGDSLRILPSLRTIHDSLCHLKHLRYLELRYTDISALPRNIGRMKFLEHIGVRGCHRLSKLPSSIIKLDNLRHLSIDETKIRAIPRGFSRLLNLDVLWGFPVHGVAQGTAKHYCTLEDVGPLSQLRKLKLKGLENAPSKSAALAELGTKSRLTCLELWCSNDETKDAIVTVEQEQIKELFDLLRPAECLEELTIGGYYGDTVPDWIKMPEAAIFKDLRRLNLQNLVSCIQLPDGLGQLPNLDFFVVDDAPCIKQIGHCLLFEQGQRNMDNKKGSRHVAFPKLHELHLKGMMEWNEWTWEKHVEAMPVLSVLHVKDCNLSHLPPGLPYQARALKRLCVINARNLNSVEGFSSVVKLEVYGDPNLERIVDLPSLQNLTIVNCPKLMLLDGVASVQIMELGDHGMETLPEYLRHLTLRHLKIVCSLNLLRLMSTKHDASRSEWEKISHIMHVEGFASDNGDGILRWALLLFYTALHHDWQQCSVTSGVIPE |
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| Function | Putative disease resistance protein RGA3 [UniProtKB/Swiss-Prot:Q7XA40] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_10g0009360 | OsLima_10g0009360.01 | Chr10 | 15098995 | 15111426 | + | NAM | ||
| CDS seq | atggagatgatcctggatgcccttgcatcctacctcggcgagcagttcgccaagatggtgaaagacgaggcagggatgctgcttggcgcttctggcgaggtcgagaagctgacaggcacgctgagcaggctcaagaagttcctggccaacgcggagaggcggcacatcaccgatgccaaggaaggagaatatgtgcatgagtgggtgaggaagctcaaggatgccatgtacgacgccaccgacatcgtcgatgacgttcatctcaagtcggagcagcggcgcgagcggtatgcgtctccgtatccaggcagctgctccaactcctccttgctctggtgcttgcaggatcccctcttcgcccacaggatcggaagccgagtgaaggagctcaatgagaggatggatggcctcttcaagcaggctgaagctgaccagcaggctgacactgaccgactcaaatccagctcaacccctggcaaccctcatagtggcaaccctaggaggacagcccccgggatcatccacgaagacatcgtcggtgacaagattgaagaagataagaggatgctggtggactggctcatcaaccatgacaagaagtatctggtggttgccatccaaggcgtcggtgggatcggcaagaccacccttgccaagaagatcttccatgatcaggcgattcaagacacctttgatgtaaagatatggttgagtgtcactcaggacttcaatgaggctcatcttctcaaaaccgccattgccatggcaaagtcagataagcaacaaatccctgccgttgaagacatggccctgcttgaggatgccctggtggaagccctgagaggtaagatgctgttgctggtaatggacgacatgtggactgagaaggcatgggacaatgggctcagagtcccaatcactgaagcctgtgctccagggacttgtgtccttgtaaccacaagaaatgaagatgttgctaaagtgatgaaagctgctcacacgcaccaagtcaccaaactaagactcgatgattcctggacattgctccagaaacaggctgccttgagtgtatcagagatcgagatagtacaagaatgtgggatgaaaattgcagaaaaatgtgatggtttaccactggcaattaaagtaataggagttgtcttatgcaagaaaaatgcaacaaaaaatgcttgggaagaggttttacgcaatcagatatggtcaaaaatgggacttcctgaagaactaaacaaggcaatatacctgagctatgaagatctgagccataacttgaaacagtgctttgtgtattactcactatttcctaaagatgaaatcattggtattgacaaaattgtttccatgtggatagctgaaggattcattggtaaagatggatattccgcacagtcagctggtctagattactacaaggagttaatcaagaggaatcttttagaacctcagaatgactactacaatgaagaacattgtatcatgcatgatgttgtacactcctttgctcagcatgttgccagggatgaagcactggtgcttcgggacccacaaaacaatggaattctctcttcatcaaaatttcgtcggttatctatatcagcagagcaaatagagtggagcaatttacagaatcagcattgtctaagaacattgatattgttcggaaacatcaagttgaaacctggcgattccttgagaattcttccatctctacggacaatacatgactccttgtgtcaccttaaacatttgagatacttggagctaaggtacacagatatatctgcactgccccgcaacattggtaggatgaagtttttagagcacattggtgttcgtggctgtCAccggttgtcaaaacttcccagcagtatcataaagctagataatttgagacacctcagtattgatgagacaaaaataagagctattccaaggggttttagcagactattaaatttggatgtgctatgggggTTTCCggttcatggtgttgctcagggcactgcaaagcattactgtacattggaagatgTtggccctctttcgcagcttaggaagcttaaattaaaaggtctggagaatgcaccttctaaatcggctgcactagcggaacttggaaccaagagtaggctgacatgcctggagttatggtgctcaaatgatgagaccaaagatgccatcgtcacggttgagcaggaacaaattaaggagttgtttgatctacttcgccctgcagaatgcttagaggagctaactattggaggctattatggtgacacggtcccagattggattaagatgccagaggcagccatttttaaggatttgagacggctaaacctacaaaactTgGTTTCTtgtattcaactcccagatggtttaggtcagctccccaatttggactttttcgtagtcgatgatgcaccctgcatcaagcaaattggacattgcttgctctttgaacaaggacaaagaaatatggacaacaagaagggttcaagacatgttgcatttccaaagttacatgagttgcatcttaaggggatgatggaatggaatgagtggacatgggagaagcatgtggaggccatgcctgttctaagcgtgcttcatgtcaaagactgcaacttgagccatcttcctcctggacttccttaccaggcaagggctttgaagagattatgtgtaataaatgctcggaacctaaactccgtggagggtttcagctcggttgtcaagcttgaagtctatggcgaccctaatctcgagaggattgttgatcttccaagcctgcaaaacctaaccattgtgaactgtccaaagctgatgttgttggatggtgttgcatcagttcagatcatggaacttggggaccacgggatggaaacgctccccgagtacctgcgacatctgacgttacgacatttgaagattgtttgcagcttgaatctgctcaggttgatgtcgaccaagcatgatgcaagcaggtcagagtgggagaagatcagccatatcatgcatgtggagggattcgctagcgataacggcgacggcatcttgagatgggcacttttactgttttacactgcccttcaccatgactggcaacaatgcagtgtgacatccggcgtcatcccggaatga
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| Protein seq | MEMILDALASYLGEQFAKMVKDEAGMLLGASGEVEKLTGTLSRLKKFLANAERRHITDAKEGEYVHEWVRKLKDAMYDATDIVDDVHLKSEQRRERYASPYPGSCSNSSLLWCLQDPLFAHRIGSRVKELNERMDGLFKQAEADQQADTDRLKSSSTPGNPHSGNPRRTAPGIIHEDIVGDKIEEDKRMLVDWLINHDKKYLVVAIQGVGGIGKTTLAKKIFHDQAIQDTFDVKIWLSVTQDFNEAHLLKTAIAMAKSDKQQIPAVEDMALLEDALVEALRGKMLLLVMDDMWTEKAWDNGLRVPITEACAPGTCVLVTTRNEDVAKVMKAAHTHQVTKLRLDDSWTLLQKQAALSVSEIEIVQECGMKIAEKCDGLPLAIKVIGVVLCKKNATKNAWEEVLRNQIWSKMGLPEELNKAIYLSYEDLSHNLKQCFVYYSLFPKDEIIGIDKIVSMWIAEGFIGKDGYSAQSAGLDYYKELIKRNLLEPQNDYYNEEHCIMHDVVHSFAQHVARDEALVLRDPQNNGILSSSKFRRLSISAEQIEWSNLQNQHCLRTLILFGNIKLKPGDSLRILPSLRTIHDSLCHLKHLRYLELRYTDISALPRNIGRMKFLEHIGVRGCHRLSKLPSSIIKLDNLRHLSIDETKIRAIPRGFSRLLNLDVLWGFPVHGVAQGTAKHYCTLEDVGPLSQLRKLKLKGLENAPSKSAALAELGTKSRLTCLELWCSNDETKDAIVTVEQEQIKELFDLLRPAECLEELTIGGYYGDTVPDWIKMPEAAIFKDLRRLNLQNLVSCIQLPDGLGQLPNLDFFVVDDAPCIKQIGHCLLFEQGQRNMDNKKGSRHVAFPKLHELHLKGMMEWNEWTWEKHVEAMPVLSVLHVKDCNLSHLPPGLPYQARALKRLCVINARNLNSVEGFSSVVKLEVYGDPNLERIVDLPSLQNLTIVNCPKLMLLDGVASVQIMELGDHGMETLPEYLRHLTLRHLKIVCSLNLLRLMSTKHDASRSEWEKISHIMHVEGFASDNGDGILRWALLLFYTALHHDWQQCSVTSGVIPE
More
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.074117 | 0.135256 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0394400 | RBH | 0.244494 | 0.834930 | 2.591383 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g25487 | RBH | 0.101095 | 0.581310 | 0.531703 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0394400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0009500 | RBH | 0.140425 | 2.481049 | 2.637999 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0009600 | RBH | 0.0 | 2.382965 | 1.271608 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0009410 | RBH | 0.309378 | 0.0 | 5.797567 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0009810 | RBH | 0.029616 | 0.096544 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0009560 | RBH | 2.181866 | 8.418854 | 8.301656 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0227000 | RBH | 1.8509315 | 9.949222 | 7.6040065 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0009560 | RBH | 0.000000 | 0.033580 | 0.681808 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0245700 | RBH | 1.9109875 | 12.2287025 | 14.548044 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0009310 | RBH | 0.081458 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0009750 | RBH | 0.560071 | 10.966028 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0009350 | RBH | 0.288049 | 0.0 | 0.513402 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0009850 | RBH | 0.000000 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G009660 | RBH | 0.073176 | 0.366851 | 0.658607 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0009630 | RBH | 0.203415 | 0.0 | 0.809356 |
