Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_10g0006800 | OGI:10033980 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr10:11288301-11294525 | ||||||||
| Gene Symbol | F3'H, OsF3'H, OsCYP75B3, CYP75B3, OsCYP84A | ||||||||||
| DNA seq | atgtggaaacactacgatgctttcgctcagggccttataacacttccactatgcattcctggcactgcgttctacaaatgtatgcaggtaaatgcatataaatttgatgcaccttgaggtagtagatgtatagtatgtatactctaattaaaAGacagcaattgtgatggtggtctcactacatatccattgttatgtggcccgggccaacatcaccacctatacctgctatgctattatgtgggggccacgtacagtgaataactttaaacagacgggcatttatttgtattaactggtaaaaggtctaaactgatctttgtccattaactggtaaaaggtctacacttatctggtttagttcttaagaaaattttaggtcagcattaaccaggctatgaaagtcatgaaaaatccacaaggaaaatcagtatcAaatttaaattatgatcatggttagcaattattttgtacatgacttgagctaaacaacaaaatttaattgatgcgagtatagtctcgtacatcgggaatgacacagtaattttagaagatgaagttctcttttagaactccgttgacacgcaagggtgtttagctagatttgataaaaagttcagttaaatcctaaccaaaaaggaaacaagaatatagacctgcataattagtgctaatagatctgcttgcattcatatataattgaatgaatttaacctccaatgtaattctctgctctattctagctttaatttgacaagaacaaatggatatgcatgttgaatttccgtgggggcctaaaattcttatgacctagctagcaatacgtagcctaaaacatgatcacataattctcaatctaaatgtggaatttggcgtattgactggaatcataatatgaaatcttcctttgccccttagcagtagttgttcgccaaaatcttattatttaggtgcctcctgcaatagactacaatgttaaaaatatagtcataattcgacatattttaattcagaaaatcataatactaaacatgaaaaaagaataaaaggatgatctatgtaatactactaaacatgaacatactaatagcacttAaaaaaacagtaataacataatttagtaatatgtaacatcAAaattggacacagaaactcatggctgcatttaaaatcggacggagggagtattaatctcttaacattaattatgagtctttggaattacaaggattaaattagacctagcccatttaattctaacaatacccaccaaatttcaaggcctccaagatatgttttcagttccgtttctgtttgttatactagtgtttcggtgaaggctattatgttcaacttccatctagaaatggagctacacgggaccacaattgaacaatggactatgccttaaattattagtcttgtggagtcaggatttactcaattccttaacatatactaggttgccgtcaaaataccctttgtttaaagcgtataagtcatattccatgccttttcatgagtatctagagataacccaaatctcatataccatgattagtagttagactcatataggtgtgttccttctaagatattctataggccgacaactctactttagaaagccactcggatcacattaaagtgtgcatcaacttgtcatacaaacaatgagagaagtacatcaaagaaatgagcatttttaaaggtctctcatcatagtcatccaatagcttgttttgccattctaattcacGggatctccgatcacacgggactggttaccactattgtgtaactcaagtaggcctcaggcccatctcactcgatgcactatctatcacaatatgcgatagtctcttagtgaactgatctaccaaatttagtagtatggacatagtgcaatgctatcactccggagttttttagctttttagtagatttcagtcttctctttatatgtctatatggcttcatgtttccttcgaaccaatcacctccatggaataacgttatgatcaggaatgtgctgatatggaggccaattttccagcccattttgacgacttggggccaattttgatgatttgcctcgtgacattgtgacttggcaagtgctaatgtggaggcccatcatgcggcctattccaatgatctgccgccttttcttgcaacatgatttcagacaaccaatcgtgatcaatgtagcctcctgcattctcatcgacttccaccattgaccaggatagggagatagacagtttgttgatacgtgttgacatgacatggctacaccacaatataggatgcggtcaccagtccgagtattgcatgtggactgtccaaaatcaagatatacgggtctgtttgacacagcttcaactccagctccatcttttttagagctagagccccgtcaaacaatttcagctccaccaaaaatgtgagtggagctgggtggagctctctcacAaaatagactagagatgtggagttgggtttggtcagctccataactgcactccagacccaactccgatcttagagttaaatttaggagttggagctctaccaaacgtacgcacactgatttggaaaacaatcgttcaacaatgcacacaatacatgtttgcacaggataaactatctcctttacattttctcacacttatattatgacctcctggcaactattgttagtaccatgacgaaaatacttcattactgtatgccaacctgactctttATGatgaattatgcctcgtttaggatgaaccttttaatgcaaactgatacttacaaacgggaccagtttactgtggttctataattaccctgcctaccaagttctatgatgaaatactttgtcatagtgtgatagctgcatcttataatgaaaaaaatccctaatgtttgtgattgacatatttttcaccgtgaaagatttttatgatgaatacctccaggcgtcattatAatctgtcatggatgtactttacaatgttttttttaaataattagttatgtagtttgatacaaagaaattaacctatatatataacaagtttgtgattcagtagtcagcaacattgtattactacttttttattataactaaccgtcatcatgtaaattaaaataaataaaaatggccccgttcatcatggactggatttatcatgcaggggcgaaagaatgtcatgaagatgttgaaagaaatactcaatgagaggaagaagatagaaggacgccatgaaagcattgacttccttgatgtcctgatagaggaagttaaggaggataatccttcaatgaccgagaatacagcattgaacttgctcttttcgcttctgtttggcagcttcgacaccacatcatccggaataactgggatgctcaaatttttgacagataatcctgaggccttgcgagaactgacagtaagtgctagtacaagtcatatgaattcctttcacaaattcatacaagtaatacaataataggaatgtttaaatttcttcactactacatgcttaggattgcgccctcatacatgtgacaaccaatacataaaacctatttaattagaacagcaacgtacataagaactatactagcaatgtaaagtttgatttttttttatatgaatgcatacttccccgtAaaagttactgtggaaatgctatatatttccaaataatccaggatacattttgctgtaaatgatatttggtctttttaggaggagcacaataacatacggagaaaaagggccgatctgaactccgaaatcacatgggaggaatacaagtctatgaaatttacatctcacgtatattccttcaatttctttaactttctacatataaaaaattaacaatttacacatgtatatgtatatggttaatgttaaatcctctcacaatatatacgctcactcatctacttaattatttgtaggttatacacgaagctttgaggcttgctagcattactccgatgatgtttagagaagccatagaggatgttcatatAaaaggtaaaaacacgctacaacaaaaatctcatgtagttgcattcttgtagaggtaatttttaaaatggctttaaaatcaagagttataaagtgtagagacagtgttagaggcacgttaaatattgcctaaaaacttttaatctagagacacttttagcacaatttgttaaatttaccttgtagaggcacttttaccgcactttaaaatttgcttgatatataaaggcaTttttttaagacatttcaatctccattggggcacttactggaattttaatctcagctaattaactcaataaaagaaacacgaagcaaatatgtacaagtaataacatgaggttgatatggttaaaacattcaagtagaaaatgaaatattcaagaggtctagagttcaaggatggacaattgcaagggaagttatatttttttttaatttttacattggtttactatggttgtggcagagttaatgccttccgaaaatgcctatactctcttatagacaaaaagaaatgcctctgtaaaagtgtccaagagcatacaaacattttgtaaagtgcctcttcatttatatagagataattcactagaacatctttatagtattagagaaatgtctctacaaggtaTTtttgttgtagccgttgcttttcacatgtagtacaacgcgatgtaaaagatgtatatatcctgtctgttccacattatattataagaagtttgacaagtttattgaaaaacataataacacattggatttatttattaaataaagcactgaaaatatatttataatatatttgttttgtcttggaaatgctgccacattttttttatgaagttggttaacttgaagaaatttgacttagctaggaaaaaatccgaatatcatattataatatggacatatagggaatagtagaaaatttgtaaaagaatattttacaatgtttcttcttaaatatatttgtataatttgtgcaggttttgctattccaaaaggatcaaaaattatgatttgtccttctactgttcacctaaaccccgtggtctatgaggacccaatacattcaatcccttgagatggaaggtttgtgaacataTtttgcacataagcttcacgtgtacataccatacatatgactaataaatattaccaaaaaaatatagaaaatatgtacatatactttcagttgtattacacctatgtgtaaagtcataatcttaaattcgttgtattttagccctaacaaaaagttaaaagctataacagttttaagggtatatatctgttagaattttgtctttttatttattgccccctgtgtatgataaatttcaaagatgggacacattattaatttaatactactaaaaataacatgtacaattttttcatttttttataaaatatgttagtggtgtaaggtgtgtgcacacctagccttgtgtatagggtacgtttcttctaggtcctactaaaagccactattgagcaattctgaagtgcgagagctatgtagaattgtgtctccaaagttctgatttgttgcatccatgttgctctgtacaggatattgctgaacctgctggtggtgcctccaaggatttcatgccctttggagggggactgcgtttgtgtgttggtgcacattttgccaagctgcagatggcagtcttcgtccactgcttaaatctgcactcccatttgtttctatctaggcctggtttagttcccaactttttctttaaacttctaacttttctatcacatcaaaacttttttacacataaacttccaacttttctgtCAcatcattccaatttcaaccaaactttcaattttggtgtgAACTaaacacaccctacttaagtgtattgaagcctactgttgcaaaggtatacctagttcagaatgcatctaggagcttcgagattaTtttcatctgtattaaaacatgtatacactgatttctcacacattttgttctgcatgtaatgagtatacttaagaagataagttattctctatatatacatggatgctgaagtaccctgcAaaaaaaaaatgaccttctgtctacacttgtcagttggaaagcgatcaaaggaggaagaatggtgctttctcccggcctacgatttcccgaaggttttcatatccaacttttcccaaaggactga
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| CDS seq | atgtggaaacactacgatgctttcgctcagggccttataacacttccactatgcattcctggcactgcgttctacaaatgtatgcaggggcgaaagaatgtcatgaagatgttgaaagaaatactcaatgagaggaagaagatagaaggacgccatgaaagcattgacttccttgatgtcctgatagaggaagttaaggaggataatccttcaatgaccgagaatacagcattgaacttgctcttttcgcttctgtttggcagcttcgacaccacatcatccggaataactgggatgctcaaatttttgacagataatcctgaggccttgcgagaactgacagaggagcacaataacatacggagaaaaagggccgatctgaactccgaaatcacatgggaggaatacaagtctatgaaatttacatctcacgatattgctgaacctgctggtggtgcctccaaggatttcatgccctttggagggggactgcgtttttggaaagcgatcaaaggaggaagaatggtgctttctcccggcctacgatttcccgaaggttttcatatccaacttttcccaaaggactga
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| Protein seq | MWKHYDAFAQGLITLPLCIPGTAFYKCMQGRKNVMKMLKEILNERKKIEGRHESIDFLDVLIEEVKEDNPSMTENTALNLLFSLLFGSFDTTSSGITGMLKFLTDNPEALRELTEEHNNIRRKRADLNSEITWEEYKSMKFTSHDIAEPAGGASKDFMPFGGGLRFWKAIKGGRMVLSPGLRFPEGFHIQLFPKD |
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| Function | Cytochrome P450 87A3 [UniProtKB/Swiss-Prot:Q7XU38] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_10g0006800 | OsLima_10g0006800.01 | Chr10 | 11288301 | 11294525 | + | NAM | ||
| CDS seq | atgtggaaacactacgatgctttcgctcagggccttataacacttccactatgcattcctggcactgcgttctacaaatgtatgcaggggcgaaagaatgtcatgaagatgttgaaagaaatactcaatgagaggaagaagatagaaggacgccatgaaagcattgacttccttgatgtcctgatagaggaagttaaggaggataatccttcaatgaccgagaatacagcattgaacttgctcttttcgcttctgtttggcagcttcgacaccacatcatccggaataactgggatgctcaaatttttgacagataatcctgaggccttgcgagaactgacagaggagcacaataacatacggagaaaaagggccgatctgaactccgaaatcacatgggaggaatacaagtctatgaaatttacatctcacgatattgctgaacctgctggtggtgcctccaaggatttcatgccctttggagggggactgcgtttttggaaagcgatcaaaggaggaagaatggtgctttctcccggcctacgatttcccgaaggttttcatatccaacttttcccaaaggactga
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| Protein seq | MWKHYDAFAQGLITLPLCIPGTAFYKCMQGRKNVMKMLKEILNERKKIEGRHESIDFLDVLIEEVKEDNPSMTENTALNLLFSLLFGSFDTTSSGITGMLKFLTDNPEALRELTEEHNNIRRKRADLNSEITWEEYKSMKFTSHDIAEPAGGASKDFMPFGGGLRFWKAIKGGRMVLSPGLRFPEGFHIQLFPKD |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0179200 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g19140 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0179200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0007000 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0007030 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0006750 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0007200 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0007070 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0173300 | SBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0007050 | SBH | 0.000000 | 0.243513 | 3.986659 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0183000 | SBH | 0 | 0 | 0.0070445 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0006810 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0007300 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0006710 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0007370 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G007030 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0007070 | SBH | 0.0 | 0.0 | 0.0 |
