Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_10g0004560 | OGI:10019080 | 11/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr10:6223528-6228291 | ||||||||
| Gene Symbol | WAK112, OsWAK112, OsWAK112d | ||||||||||
| DNA seq | acacatcagaaataggataaacacatctaccgtggtaagctagcagatgacaagaattcttgctccaagctatagcatgatatttggaagcgttgagatgctgcattagctctatcaacatccaaatttgttactaatggttgtatctctgggtcactggctccttcagtcagaacagtttgaatctcttggtcaatggttggatctacttgagatgagttcatcgtttttgttcgcagaagctgtaacgtcatctctactttcttcatcgtgggcctttcttcaccttttagcttcaagcacatctcagcaagggatgcaacttctttgatatcttcctcatttgcttcttcgagaacttgagcatcgaccatatctgtaattggcctggttttaatctctgaaaggaagtaactacacaaattttgtttcatcccagagtttattgtaaaaatgggttgctttctcagaagaagttctaggagtaccacaccaaaactatagacatcactcttctcatttagctgcctagtttggtaatattctggatccaagtaaccaaatgtaccctgtacatttgtgatgatatgggtttgatcgatgggaactgatcttgaagcaccaaaatctgaaactttagcagtatagtttgcatccaagagtatattagatgacttcacatcacggtggaagatggaaattgatgctgcagagtggagataatatagagctccagctgcttctgctgcaatccttaggcagtcaccccatgataaatagattgtgctactggaatctggatgaagtagtccgaacaatgaaccattgggaataaaatcatagactaataaggggacctcagtttcaagacagcatccaaagagtttaacaatatttcggtgatttatctgagaaagaatcgaaacctcgttgatgaaatcattaatctcgcattcccttataactttggcctttttaatagccaccacatgttggttagataagatacctttgtatactgttccatgccctccacggccaaggatacgtgtggtatcaaagttatttgtcgcctttttaagctcttctaaggagaaaatttttgtcttctcactagcattttcatccgatgatatcaattgttccaatagaaggccctggttcttttggaaatacttcctctgcagtcttttctgtgcatgtcttttccatcttcgaatgagaactattccacttaatccaagaagtagcattccaaagccactgctaaggccaattataatacctacaatgataaaatcccctatgatatatatcaatgcaccctctaccagtgttgtttgatcactataggacattaggactcacctaagtagaagcttttctttcttattggagtacactgcattcttaaaatatcgtactcggtatgatcagggcacttggtgcagctgtagtttccaacggtattcttgcaaactcctttacaaattcctggtgtctctcggcactcgtcgatatctgtaaccggtaaacacatctcagtaaggcaatatataattttgaacaaaaaactgtatttatgtaccaaataaaatattggccacatgattctttttatcacactagaatgataaatattaagaaaacattggggacttatgtatgtttgatagtcagataatttccatgaggaactctttgctttgtatgcaagaacatcgttcaatttgtagaaaataagagaaattgtgattatttaatagttaatttaataaaatttactgatcaggataaaaatatgacagtagggaagagcagccactcgaacatcatttgaaatttgatgtttcagcattggtgattggtatcgttgactctgttaggccataatggtcgatgtttttcgttgtttaaatatcaaagatttgaattcaatgtgacctttgcagcaatcatgtttaatttgggggatgaagttggtgaattaccttcgcagccatctaggatgtatggatttccacgataaccaggcaagcaactgcatctgtagccaacataaccatccatggagctaaggacattcaagcaggagctgctggtacttacacatgcatatccagaagtgttgtgttgcgcctcttggcatgtcaggttggcaacggcccattgcacagagactgattcaagagggtcaacaaataggtctggctcattatcagaagtcatcatttccatcattatattgaatagttgctcctccagcgatgagttgtgtttgatgcccagaagtccttcactgacatttatatacgtcacctgaaaatagtcattgaacttgaggaccgaatttgtcttgtcggagcagttgagctgaaaacgtttccttgcggagcaaccctcttcaaggccaaacggaaacgggactgtgattgtcccacattgtcgagcgcaattatgcttttctggtctagggttgtaacctggcatcagtaaaaactccatgttatgccccatctccaagtgttctcgttgtttctggtaaaagggtatacatgttggaaacatatcgtatacacataagccttcctgtgtacataccgtgcacactaacaacaaatatcaccgaaaattatagataaaattgcacggataaattttatcttcaaattagatctaaaaagatataataaatttgagtttaaaattatcaaatttttatttttaggtaaaaatataataaatttgaggttaagattttatattgggatataatactttagatttttctgtgatatttgttagttggtgtgcacgatgtttacatgcaaagcttgtgtacataggatgtgatcgcatacatgtcctagttgtatttgtaaaaatgagtgatgcatgtatttacgcatagataaagtggattaatagtgcattttcattttgtacgagaacatcaaagtactgtatagtcatctattgttgaccacaaaatatggtatcggtaaaagagagataatgttttcatttccaaaatgaataaatggaaataataaaatccagtatatactgtttatcctagtagaaggaaaaaaaagtggaaaatatgtttgccccagaagtatatattcactaattatgggagaaaattctatctgcaaacccaattatcccagaagttcccaaattttttgacaaaaatgtcaagtggctaaaaatattccgagctgatcttcctagggtggaaactgacaagaacttactcgtgtggttgctgaataattcgtttttttgtcagttccctggaattaaagaggaatatacttgatcctgaatatgacattcaattgctccgtcagcatattacttacctcatcctgttcattgcgtcaaatagcatggtgaagacaagagaaagggttacaaattacaatcggtcccaactcccaaatgtcaggtcaaaatcagatgattgtgcatgttgatttcagactttcagtactaaaatcaaatgcttggatatttaaagtactaaaacagtgacttttgtttttttaaatgtaatacgacgacaaggtatatctactgactactgtagatatagaggccggattgctatccttatcttttaaagtaatacgataattaaggtatggtggagaaagttaccgctgtcatgcttgcaaccatcaaggataaaaggatttcccttgtagccagaattgcattggcaggcatagccaatatctctaaacacagaagttatgcacccactgtggttgctgacacaagcgaagttatcttccatgtttcttgagcatcttgtttggtcaataatactccaaacaagtggcgccccaatagttatgttgattctatcccatagcatgctgagattggagatttttccagcattacttgtctcatggcgaacaaactgcaattgtacagcctgaactggtgtttcagataatacagtacaacagccagggccttcacagtcttgcatgtacaccatgtctgcaatctctttgttgggacaagcaaccatgcaaagcagtttaggagtgttgtcttggcctatcaagaatacatccaagtcgcagctgacgacagtaattatcatcatctctgaaatagtaaaagaaatccctggggctttccatgtaaggttatagacatcgacaccagcttttatggggatgagatggttaaatgcgaccataaagaagttgaaatagaaaaactcagctatatccttaccgacgacctcaatattatctataacctccacgctttcgttaatatgcaagaggagtttgggaggctgagtagtggcgttgcatgtgagactgaaatcgggatggcggaaacaaccatctcctatgccgaagggatagtcgaagctcaagttgccgcatcgctttggacagttagcaagtgtggcagcagagggaaggcttgcattagatgatctcctatcatcactactatgatcctgcagtaaggaccttctctcaaactttcttgccgtaacctctcggtacggggtgatcagatggctatttgagaggatttgactcagtgctacagttccctcgacttcagctaaccctaataacacaaatgaaaggaaagctaacatgatattgaggtggcccatctgaactcttgctacagagatactcgattctctcaagtataaagtttggacttgtctacgtatgtttagtaacaacataagcatgtctagctaagcatgtgctc
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| CDS seq | atgcttatgttgttactaaacatacgtagacaagtccaaactttatacttgagagaatcgagtatctctgtagcaagagttcagatgggccacctcaatatcatgttagctttcctttcatttgtgttattagggttagctgaagtcgagggaactgtagcactgagtcaaatcctctcaaatagccatctgatcaccccgtaccgagaggttacggcaagaaagtttgagagaaggtccttactgcaggatcatagtagtgatgataggagatcatctaatgcaagccttccctctgctgccacacttgctaactgtccaaagcgatgcggcaacttgagcttcgactatcccttcggcataggagatggttgtttccgccatcccgatttcagtctcacatgcaacgccactactcagcctcccaaactcctcttgcatattaacgaaagcgtggaggttatagataatattgaggtcgtcggtaaggatatagctgagtttttctatttcaacttctttatggtcgcatttaaccatctcatccccataaaagctggtgtcgatgtctataaccttacatggaaagccccagggatttcttttactatttcagagatgatgataattactgtcgtcagctgcgacttggatgtattcttgataggccaagacaacactcctaaactgctttgcatggttgcttgtcccaacaaagagattgcagacatggtgtacatgcaagactgtgaaggccctggctgttgtactgtattatctgaaacaccagttcaggctgtacaattgcagtttgttcgccatgagacaagtaatgctggaaaaatctccaatctcagcatgctatgggatagaatcaacataactattggggcgccacttgtttggagtattattgaccaaacaagatgctcaagaaacatggaagataacttcgcttgtgtcagcaaccacagttacaaccctagaccagaaaagcataattgcgctcgacaatgtgggacaatcacagtcccgtttccgtttggccttgaagagggttgctccgcaaggaaacgttttcagctcaactgctccgacaagacaaattcggtcctcaagttcaatgactattttcaggtgacgtatataaatgtcagtgaaggacttctgggcatcaaacacaactcatcgctggaggagcaactattcaatataatgatggaaatgatgacttctgataatgagccagacctatttgttgaccctcttgaatcagtctctgtgcaatgggccgttgccaacctgacatgccaagaggcgcaacacaacacttctggatatgcatgtgtaagtaccagcagctcctgcttgaatgtccttagctccatggatggttatgttggctacagatgcagttgcttgcctggttatcgtggaaatccatacatcctagatggctgcgaagatatcgacgagtgccgagagacaccaggaatttgtaaaggagtttgcaagaataccgttggaaactacagctgcaccaagtgccctgatcataccgagtacgatattttaagaatgcagtgtactccaataagaaagaaaagcttctacttaggtattataattggccttagcagtggctttggaatgctacttcttggattaagtggaatagttctcattcgaagatggaaaagacatgcacagaaaagactgcagaggaagtatttccaaaagaaccagggccttctattggaacaattgatatcatcggatgaaaatgctagtgagaagacaaaaattttctccttagaagagcttaaaaaggcgacaaataactttgataccacacgtatccttggccgtggagggcatggaacagtatacaaaggtatcttatctaaccaacatgtggtggctattaaaaaggccaaagttataagggaatgcgagattaatgatttcatcaacgaggtttcgattctttctcagataaatcaccgaaatattgttaaactctttggatgctgtcttgaaactgaggtccccttattagtctatgattttattcccaatggttcattgttcggactacttcatccagattccagtagcacaatctatttatcatggggtgactgcctaaggattgcagcagaagcagctggagctctatattatctccactctgcagcatcaatttccatcttccaccgtgatgtgaagtcatctaatatactcttggatgcaaactatactgctaaagtttcagattttggtgcttcaagatcagttcccatcgatcaaacccatatcatcacaaatgtacagggtacatttggttacttggatccagaatattaccaaactaggcagctaaatgagaagagtgatgtctatagttttggtgtggtactcctagaacttcttctgagaaagcaacccatttttacaataaactctgggatgaaacaaaatttgtgtagttacttcctttcagagattaaaaccaggccaattacagatatggtcgatgctcaagttctcgaagaagcaaatgaggaagatatcaaagaagttgcatcccttgctgagatgtgcttgaagctaaaaggtgaagaaaggcccacgatgaagaaagtagagatgacgttacagcttctgcgaacaaaaacgatgaactcatctcaagtagatccaaccattgaccaagagattcaaactgttctgactgaaggagccagtgacccagagatacaaccattagtaacaaatttggatgttgatagagctaatgcagcatctcaacgcttccaaatatcatgctatagcttggagcaagaattcttgtcatctgctagcttaccacggtag
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| Protein seq | MLMLLLNIRRQVQTLYLRESSISVARVQMGHLNIMLAFLSFVLLGLAEVEGTVALSQILSNSHLITPYREVTARKFERRSLLQDHSSDDRRSSNASLPSAATLANCPKRCGNLSFDYPFGIGDGCFRHPDFSLTCNATTQPPKLLLHINESVEVIDNIEVVGKDIAEFFYFNFFMVAFNHLIPIKAGVDVYNLTWKAPGISFTISEMMIITVVSCDLDVFLIGQDNTPKLLCMVACPNKEIADMVYMQDCEGPGCCTVLSETPVQAVQLQFVRHETSNAGKISNLSMLWDRINITIGAPLVWSIIDQTRCSRNMEDNFACVSNHSYNPRPEKHNCARQCGTITVPFPFGLEEGCSARKRFQLNCSDKTNSVLKFNDYFQVTYINVSEGLLGIKHNSSLEEQLFNIMMEMMTSDNEPDLFVDPLESVSVQWAVANLTCQEAQHNTSGYACVSTSSSCLNVLSSMDGYVGYRCSCLPGYRGNPYILDGCEDIDECRETPGICKGVCKNTVGNYSCTKCPDHTEYDILRMQCTPIRKKSFYLGIIIGLSSGFGMLLLGLSGIVLIRRWKRHAQKRLQRKYFQKNQGLLLEQLISSDENASEKTKIFSLEELKKATNNFDTTRILGRGGHGTVYKGILSNQHVVAIKKAKVIRECEINDFINEVSILSQINHRNIVKLFGCCLETEVPLLVYDFIPNGSLFGLLHPDSSSTIYLSWGDCLRIAAEAAGALYYLHSAASISIFHRDVKSSNILLDANYTAKVSDFGASRSVPIDQTHIITNVQGTFGYLDPEYYQTRQLNEKSDVYSFGVVLLELLLRKQPIFTINSGMKQNLCSYFLSEIKTRPITDMVDAQVLEEANEEDIKEVASLAEMCLKLKGEERPTMKKVEMTLQLLRTKTMNSSQVDPTIDQEIQTVLTEGASDPEIQPLVTNLDVDRANAASQRFQISCYSLEQEFLSSASLPR |
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| Function | Wall-associated receptor kinase 5 [UniProtKB/Swiss-Prot:Q9LMN7] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_10g0004560 | OsLima_10g0004560.01 | Chr10 | 6223528 | 6228291 | - | NAM | ||
| CDS seq | atgcttatgttgttactaaacatacgtagacaagtccaaactttatacttgagagaatcgagtatctctgtagcaagagttcagatgggccacctcaatatcatgttagctttcctttcatttgtgttattagggttagctgaagtcgagggaactgtagcactgagtcaaatcctctcaaatagccatctgatcaccccgtaccgagaggttacggcaagaaagtttgagagaaggtccttactgcaggatcatagtagtgatgataggagatcatctaatgcaagccttccctctgctgccacacttgctaactgtccaaagcgatgcggcaacttgagcttcgactatcccttcggcataggagatggttgtttccgccatcccgatttcagtctcacatgcaacgccactactcagcctcccaaactcctcttgcatattaacgaaagcgtggaggttatagataatattgaggtcgtcggtaaggatatagctgagtttttctatttcaacttctttatggtcgcatttaaccatctcatccccataaaagctggtgtcgatgtctataaccttacatggaaagccccagggatttcttttactatttcagagatgatgataattactgtcgtcagctgcgacttggatgtattcttgataggccaagacaacactcctaaactgctttgcatggttgcttgtcccaacaaagagattgcagacatggtgtacatgcaagactgtgaaggccctggctgttgtactgtattatctgaaacaccagttcaggctgtacaattgcagtttgttcgccatgagacaagtaatgctggaaaaatctccaatctcagcatgctatgggatagaatcaacataactattggggcgccacttgtttggagtattattgaccaaacaagatgctcaagaaacatggaagataacttcgcttgtgtcagcaaccacagttacaaccctagaccagaaaagcataattgcgctcgacaatgtgggacaatcacagtcccgtttccgtttggccttgaagagggttgctccgcaaggaaacgttttcagctcaactgctccgacaagacaaattcggtcctcaagttcaatgactattttcaggtgacgtatataaatgtcagtgaaggacttctgggcatcaaacacaactcatcgctggaggagcaactattcaatataatgatggaaatgatgacttctgataatgagccagacctatttgttgaccctcttgaatcagtctctgtgcaatgggccgttgccaacctgacatgccaagaggcgcaacacaacacttctggatatgcatgtgtaagtaccagcagctcctgcttgaatgtccttagctccatggatggttatgttggctacagatgcagttgcttgcctggttatcgtggaaatccatacatcctagatggctgcgaagatatcgacgagtgccgagagacaccaggaatttgtaaaggagtttgcaagaataccgttggaaactacagctgcaccaagtgccctgatcataccgagtacgatattttaagaatgcagtgtactccaataagaaagaaaagcttctacttaggtattataattggccttagcagtggctttggaatgctacttcttggattaagtggaatagttctcattcgaagatggaaaagacatgcacagaaaagactgcagaggaagtatttccaaaagaaccagggccttctattggaacaattgatatcatcggatgaaaatgctagtgagaagacaaaaattttctccttagaagagcttaaaaaggcgacaaataactttgataccacacgtatccttggccgtggagggcatggaacagtatacaaaggtatcttatctaaccaacatgtggtggctattaaaaaggccaaagttataagggaatgcgagattaatgatttcatcaacgaggtttcgattctttctcagataaatcaccgaaatattgttaaactctttggatgctgtcttgaaactgaggtccccttattagtctatgattttattcccaatggttcattgttcggactacttcatccagattccagtagcacaatctatttatcatggggtgactgcctaaggattgcagcagaagcagctggagctctatattatctccactctgcagcatcaatttccatcttccaccgtgatgtgaagtcatctaatatactcttggatgcaaactatactgctaaagtttcagattttggtgcttcaagatcagttcccatcgatcaaacccatatcatcacaaatgtacagggtacatttggttacttggatccagaatattaccaaactaggcagctaaatgagaagagtgatgtctatagttttggtgtggtactcctagaacttcttctgagaaagcaacccatttttacaataaactctgggatgaaacaaaatttgtgtagttacttcctttcagagattaaaaccaggccaattacagatatggtcgatgctcaagttctcgaagaagcaaatgaggaagatatcaaagaagttgcatcccttgctgagatgtgcttgaagctaaaaggtgaagaaaggcccacgatgaagaaagtagagatgacgttacagcttctgcgaacaaaaacgatgaactcatctcaagtagatccaaccattgaccaagagattcaaactgttctgactgaaggagccagtgacccagagatacaaccattagtaacaaatttggatgttgatagagctaatgcagcatctcaacgcttccaaatatcatgctatagcttggagcaagaattcttgtcatctgctagcttaccacggtag
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| Protein seq | MLMLLLNIRRQVQTLYLRESSISVARVQMGHLNIMLAFLSFVLLGLAEVEGTVALSQILSNSHLITPYREVTARKFERRSLLQDHSSDDRRSSNASLPSAATLANCPKRCGNLSFDYPFGIGDGCFRHPDFSLTCNATTQPPKLLLHINESVEVIDNIEVVGKDIAEFFYFNFFMVAFNHLIPIKAGVDVYNLTWKAPGISFTISEMMIITVVSCDLDVFLIGQDNTPKLLCMVACPNKEIADMVYMQDCEGPGCCTVLSETPVQAVQLQFVRHETSNAGKISNLSMLWDRINITIGAPLVWSIIDQTRCSRNMEDNFACVSNHSYNPRPEKHNCARQCGTITVPFPFGLEEGCSARKRFQLNCSDKTNSVLKFNDYFQVTYINVSEGLLGIKHNSSLEEQLFNIMMEMMTSDNEPDLFVDPLESVSVQWAVANLTCQEAQHNTSGYACVSTSSSCLNVLSSMDGYVGYRCSCLPGYRGNPYILDGCEDIDECRETPGICKGVCKNTVGNYSCTKCPDHTEYDILRMQCTPIRKKSFYLGIIIGLSSGFGMLLLGLSGIVLIRRWKRHAQKRLQRKYFQKNQGLLLEQLISSDENASEKTKIFSLEELKKATNNFDTTRILGRGGHGTVYKGILSNQHVVAIKKAKVIRECEINDFINEVSILSQINHRNIVKLFGCCLETEVPLLVYDFIPNGSLFGLLHPDSSSTIYLSWGDCLRIAAEAAGALYYLHSAASISIFHRDVKSSNILLDANYTAKVSDFGASRSVPIDQTHIITNVQGTFGYLDPEYYQTRQLNEKSDVYSFGVVLLELLLRKQPIFTINSGMKQNLCSYFLSEIKTRPITDMVDAQVLEEANEEDIKEVASLAEMCLKLKGEERPTMKKVEMTLQLLRTKTMNSSQVDPTIDQEIQTVLTEGASDPEIQPLVTNLDVDRANAASQRFQISCYSLEQEFLSSASLPR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.082289 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0180800 | RBH | 0.439637 | 0.342661 | 0.251407 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g10130 | RBH | 0.289552 | 0.227402 | 0.063857 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0180800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0004550 | RBH | 1.248090 | 0.0 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0004490 | RBH | 0.039142 | 0.0 | 0.059610 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0004430 | RBH | 7.926063 | 0.0 | 0.988909 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0004750 | SBH | 0.0 | 0.018485 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0004520 | RBH | 0.288566 | 0.000000 | 1.395718 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0093100 | SBH | 0.0043835 | 0.283388 | 0.045518 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0004690 | RBH | 1.235849 | 0.0 | 0.072022 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0105100 | RBH | 11.9904545 | 13.408496 | 2.479924 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0004510 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0004520 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0004680 | RBH | 0.000000 | 2.158720 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0004440 | RBH | 0.620884 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0004760 | RBH | 1.995484 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G004610 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0004630 | SBH | 0.0 | 2.477620 | 0.0 |
