Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_10g0001780 | OGI:10008410 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr10:2626246-2631378 | ||||||||
| Gene Symbol | Gnk2RLK-8 | ||||||||||
| DNA seq | atggacatcgtcgtcggagtcctgctcatactgggcctcatgccgatgccgttcgaggtcatcatggccgccgccgacgatggtggccgcgtgttctgcgacaacctcaggctcgtgtccgcaaccctcccgaacaaaacctcctcctccctgcaccactacgccaccgccgccgccggccaagcccccgacgtggtgtacgtcctcgcgctctgccgcggcgacctcaacgacacagcttgcggcaaatccgtcgccaacacattcaccaaactgatcaacgagtcgtgcgacgccaactacacggccggggcttactacggcgactgcgccggcgtctactcctcccacaactttctcgagccttccaacgatggtgatgagatgctcctcgacaagtggaacgtcaacaacatcaccggcgacggcgagaacgtgcggttcatcgccggcctcatccagcagctgctgtcggagacggtggagacggcggccggcgcggcggggcggttcgcgacgggcgtcgtggacaccggcaggacgttcccgctggtgtactcgctggcgcagtgcacgccggacctgtccgccggcgactgcctggcgtgcctccgccgcctcaccggcatgatcaactccaccatggccgtgcgcatgggcgcgcagatacatgtcacacggtgctacttcaggtatgaggcgtacgtgttctacgacagcaagcccatgctgcatctcaccggcgcgacggtgccaccgccggctccggccatccccaaaagtaagactattcttggattctcaattagacctcgttcggttattccctacaactgtggaattaatcctctgggtgggcttgttcggttattctccacgactattgatggccaaaatgggcggcacggccgggcccaggccaagatcacttgcccatgcccacttgctgcaccatcggtctaggcatagctcaataaaacttgggccttaccaggccagcccaaaggcatgaaagccatcatgctaaaagtttattttaagtctctaatatctttcggcagtctcttaatggctagaataagtctatttgcatcactcatttctttgggccgtgtcctatatatagacggccatatggcttgaggcctgtggcccgcccaagcacgacacagcctgactcggggtcatgcccgtgccggcccggctcgatagccgggccgtgcctcggccgcaccctcggcacggtgggctggcccggcacgacacaaccgaataaaaaaagtggagggatgcaaaatagacttgatgaaccatatcggacaggacccaaagaggagaggaatacagaatagacttattttccaaccatatggacctagcccacagagttgagggaccaaaaatagacttattctgtgaaaatcgcaatgagccgtgcctttgagctggcccggcacaacccgagtcatgttgggccatgcctgggctgtgtgtgcggcctgtgggctggcacggcacggcccggagtgtaggtcaggtcgtgccgacccgactaacctcagcccaggcacggccgagcctgggccgtgccgcccgtttggccatctatagtcctatatggctacaataagtctatttaactccttaatcatttgaccgggccatgctaggtcggcccatcgtgccgagggtgaggcccaggcacggcccaaaagtcgggcaatgccatgctttggttaggccaaaactccgtgccatgggccaagccgtcgggcctctggtcttttggtcaactatatccacgacggaggcaatggaggggattgagagagaatatataatccctcggtaaatctctcaactctcttatgggtgggattaaccactaaataaggccttgatcacgtccaatttctttctcataaagatcaaccgaacaagctttagagattacaaattccgtaaaattaatttaatcatatatatactcttcagatcccacatgtcagtcaccttagatgacgtcagatgtcactagtatagcagagtaaatatttaatgttcgattaaaaggaaggacatatggttaaacctcacaccaaatgttttgaatttgtttgagtttagttaaaataaatttaacttcagcaaaatcagattcaacctttttttttctgaaattggaattcaccaaaattattatgtattcagattttcaacctcctgacccacatgtcagttactttagatgaccccacatgtcattgggaacatgagagtaaattcttaaattttgatctaaaggaacagtatatgatcaaatcgcctgctatgatttaaattcctttcttgttagttttgaagtgaaaaatgttcattgccttgaacaatttcgaatttgtttgactttaggtaaagttatttcaaattcagcaaaatctgttcaaattattttttttgaatttcctgaaatttgtaattcaccaaattatttaatattcacgttgtgaacctgtcccaatgcactatagttatgaatgatttgcaaaataatatccaatgtgtactattaatatatttttccatgtataaaaattagcttctatctacttctgtttagacaaaaagattgttatgtcatgttttagggcataagagcaagctctgggtaattcccattgtcgtaattcctgtggtggcatttttctgcttcattgtttactgcggctggcggaggaggcacagaaaaggtaggttactaatttataaaatatttcatattgtttaaattacttaccaatgtcatggtcagtttttttacagtgaggtatagatactaggagattctacattactaattaattaaaatcagggaaaatgacactagctagttaacattaggtggtctcagaccataaaaggtacctagtgttgtgttcattagatataactgaacattgaagagtgatattcttaattattcaggtataatgggattacaagcaaggaggactgagaacttgcagggagacgaagaattagtttgggacctggaagggaaaagtccagagttttcagtatttgagtttgatcaggtactggaggctacaagtaatttttctgaagaaaacaagcttggagaaggtggctttggcgccgtgtacaaggtaaaaatacaaaacacatagtccctccgttaacttttgaacatatatttgatcgtttgtctaatttaaaagaacttgtataaatatataaaaaatataggccatgtttatagtactagtaatgataaaaaaattacaagaaaataaatgataattacgtaatatattttgtataagatgaatgacaaacatgtccatatataaaagtcaacagtgtcaaaggagtatgtgattatgtgtaatgggaaacttttctagtttaaccttagtagacgactatatacaataaacatgcaactattatttaaaacggcttcaattttggcttcatgataattatcaggaattgaactttcggtctaaagttttatgacacctaaaacacaccacactcatctccaactatgcagccAaaaaaaaaaaaaactatgcagccaaatcagctactggtttcctggggacttttcatggatcaactagcttgtgcatcataaaacaatctgcttgcaccacaaaaccactaaaggacttctaatttttttgcagggccagttttctgatggaacggagatagcagtcaagagacttgcttcacattcaggacaaggtttcatagagttcaaaaatgaagtccagctcatagccaaactacagcacaggaatttggttaggctcttggggtgttgctctcatggagaggagaaaattttggtctatgaattcttgccaaacaaaagcttggacttatttatctttggtatataatttgtattatatttctcagtataggttacataatttcataaaaattaattgttatgttctttttcctgtcatactgatactttactgatgtgcagatgaaaataaaagagctttgctggattggtacaatcgtctagaaataattgaaggaatagcacatggacttctttacctacataaacactcccgattgagtgtcatacatcgagatcttaaaccgagtaacattctcttggatagcgaaatgaaccctaaaatttcagactttgggctagcaagaatatttagctcaaataacacagaaggaaacaaaacaagaagagtggttggtacatagtaagtttcatgtaaattagtccacttatgaaatttatgttataactcaactgcacatacgatacataattttacttgcatgaattattttagcggctacatggctcctgagtatgcttctgtgggcctcttctctatcaaatccgacgtattcagctttggtgttctatttctcgagattctcagtggaaaaaagaattctggttcccatcatagtggagactttatcaatctccttggatttgtgagtttacaaacacatatacaatattttaaaattgtcttttctgtctaagtggtgtttttcctacattaacctacctatattgttcttgaaattccatacaggcatggtcactatggggagagggaagatggcatgaactcatagatgaatcattagtttccaagtatcatcctgcagaaaatgaaatcatgaggtgcattaacatagcattgctgtgtgtacaagagaatgcagctgatcgaccaaccatgtcagatgttgttgcaatgctaagcagcaagatgatggtcctggctgaacctaagcacccgggatatttcaatgtgagagtggcaaatgaagagcaatctgtccttactgagccatgtagtgttaatgatatgaccatatctgtcataagtgctagatagtttattcttcatgtgtcatgtgggtttcgttgatccaatgtacgtagtatttgaagacatcaaaacagaattataatgctatggtatttcaggtgtaggagtatgtactccccaaagagtgatcctagatttttgtatacaaacaaatggcttttgtatttatttggtgggtagcaaataaaaaccataactatatatcgttggtgcc
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| CDS seq | atggacatcgtcgtcggagtcctgctcatactgggcctcatgccgatgccgttcgaggtcatcatggccgccgccgacgatggtggccgcgtgttctgcgacaacctcaggctcgtgtccgcaaccctcccgaacaaaacctcctcctccctgcaccactacgccaccgccgccgccggccaagcccccgacgtggtgtacgtcctcgcgctctgccgcggcgacctcaacgacacagcttgcggcaaatccgtcgccaacacattcaccaaactgatcaacgagtcgtgcgacgccaactacacggccggggcttactacggcgactgcgccggcgtctactcctcccacaactttctcgagccttccaacgatggtgatgagatgctcctcgacaagtggaacgtcaacaacatcaccggcgacggcgagaacgtgcggttcatcgccggcctcatccagcagctgctgtcggagacggtggagacggcggccggcgcggcggggcggttcgcgacgggcgtcgtggacaccggcaggacgttcccgctggtgtactcgctggcgcagtgcacgccggacctgtccgccggcgactgcctggcgtgcctccgccgcctcaccggcatgatcaactccaccatggccgtgcgcatgggcgcgcagatacatgtcacacggtgctacttcaggtatgaggcgtacgtgttctacgacagcaagcccatgctgcatctcaccggcgcgacggtgccaccgccggctccggccatccccaaaaggcataagagcaagctctgggtaattcccattgtcgtaattcctgtggtggcatttttctgcttcattgtttactgcggctggcggaggaggcacagaaaaggtataatgggattacaagcaaggaggactgagaacttgcagggagacgaagaattagtttgggacctggaagggaaaagtccagagttttcagtatttgagtttgatcagggccagttttctgatggaacggagatagcagtcaagagacttgcttcacattcaggacaaggtttcatagagttcaaaaatgaagtccagctcatagccaaactacagcacaggaatttggttaggctcttggggtgttgctctcatggagaggagaaaattttggtctatgaattcttgccaaacaaaagcttggacttatttatctttgatgaaaataaaagagctttgctggattggtacaatcgtctagaaataattgaaggaatagcacatggacttctttacctacataaacactcccgattgagtgtcatacatcgagatcttaaaccgagtaacattctcttggatagcgaaatgaaccctaaaatttcagactttgggctagcaagaatatttagctcaaataacacagaaggaaacaaaacaagaagagtggttggtacatacggctacatggctcctgagtatgcttctgtgggcctcttctctatcaaatccgacgtattcagctttggtgttctatttctcgagattctcagtggaaaaaagaattctggttcccatcatagtggagactttatcaatctccttggatttgcatggtcactatggggagagggaagatggcatgaactcatagatgaatcattagtttccaagtatcatcctgcagaaaatgaaatcatgaggtgcattaacatagcattgctgtgtgtacaagagaatgcagctgatcgaccaaccatgtcagatgttgttgcaatgctaagcagcaagatgatggtcctggctgaacctaagcacccgggatatttcaatgtgagagtggcaaatgaagagcaatctgtccttactgagccatgtagtgttaatgatatgaccatatctgtcataagtgctagatag
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| Protein seq | MDIVVGVLLILGLMPMPFEVIMAAADDGGRVFCDNLRLVSATLPNKTSSSLHHYATAAAGQAPDVVYVLALCRGDLNDTACGKSVANTFTKLINESCDANYTAGAYYGDCAGVYSSHNFLEPSNDGDEMLLDKWNVNNITGDGENVRFIAGLIQQLLSETVETAAGAAGRFATGVVDTGRTFPLVYSLAQCTPDLSAGDCLACLRRLTGMINSTMAVRMGAQIHVTRCYFRYEAYVFYDSKPMLHLTGATVPPPAPAIPKRHKSKLWVIPIVVIPVVAFFCFIVYCGWRRRHRKGIMGLQARRTENLQGDEELVWDLEGKSPEFSVFEFDQGQFSDGTEIAVKRLASHSGQGFIEFKNEVQLIAKLQHRNLVRLLGCCSHGEEKILVYEFLPNKSLDLFIFDENKRALLDWYNRLEIIEGIAHGLLYLHKHSRLSVIHRDLKPSNILLDSEMNPKISDFGLARIFSSNNTEGNKTRRVVGTYGYMAPEYASVGLFSIKSDVFSFGVLFLEILSGKKNSGSHHSGDFINLLGFAWSLWGEGRWHELIDESLVSKYHPAENEIMRCINIALLCVQENAADRPTMSDVVAMLSSKMMVLAEPKHPGYFNVRVANEEQSVLTEPCSVNDMTISVISAR |
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| Function | Cysteine-rich receptor-like protein kinase 10 [UniProtKB/Swiss-Prot:Q8GYA4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_10g0001780 | OsLima_10g0001780.01 | Chr10 | 2626246 | 2631378 | + | NAM | ||
| CDS seq | atggacatcgtcgtcggagtcctgctcatactgggcctcatgccgatgccgttcgaggtcatcatggccgccgccgacgatggtggccgcgtgttctgcgacaacctcaggctcgtgtccgcaaccctcccgaacaaaacctcctcctccctgcaccactacgccaccgccgccgccggccaagcccccgacgtggtgtacgtcctcgcgctctgccgcggcgacctcaacgacacagcttgcggcaaatccgtcgccaacacattcaccaaactgatcaacgagtcgtgcgacgccaactacacggccggggcttactacggcgactgcgccggcgtctactcctcccacaactttctcgagccttccaacgatggtgatgagatgctcctcgacaagtggaacgtcaacaacatcaccggcgacggcgagaacgtgcggttcatcgccggcctcatccagcagctgctgtcggagacggtggagacggcggccggcgcggcggggcggttcgcgacgggcgtcgtggacaccggcaggacgttcccgctggtgtactcgctggcgcagtgcacgccggacctgtccgccggcgactgcctggcgtgcctccgccgcctcaccggcatgatcaactccaccatggccgtgcgcatgggcgcgcagatacatgtcacacggtgctacttcaggtatgaggcgtacgtgttctacgacagcaagcccatgctgcatctcaccggcgcgacggtgccaccgccggctccggccatccccaaaaggcataagagcaagctctgggtaattcccattgtcgtaattcctgtggtggcatttttctgcttcattgtttactgcggctggcggaggaggcacagaaaaggtataatgggattacaagcaaggaggactgagaacttgcagggagacgaagaattagtttgggacctggaagggaaaagtccagagttttcagtatttgagtttgatcagggccagttttctgatggaacggagatagcagtcaagagacttgcttcacattcaggacaaggtttcatagagttcaaaaatgaagtccagctcatagccaaactacagcacaggaatttggttaggctcttggggtgttgctctcatggagaggagaaaattttggtctatgaattcttgccaaacaaaagcttggacttatttatctttgatgaaaataaaagagctttgctggattggtacaatcgtctagaaataattgaaggaatagcacatggacttctttacctacataaacactcccgattgagtgtcatacatcgagatcttaaaccgagtaacattctcttggatagcgaaatgaaccctaaaatttcagactttgggctagcaagaatatttagctcaaataacacagaaggaaacaaaacaagaagagtggttggtacatacggctacatggctcctgagtatgcttctgtgggcctcttctctatcaaatccgacgtattcagctttggtgttctatttctcgagattctcagtggaaaaaagaattctggttcccatcatagtggagactttatcaatctccttggatttgcatggtcactatggggagagggaagatggcatgaactcatagatgaatcattagtttccaagtatcatcctgcagaaaatgaaatcatgaggtgcattaacatagcattgctgtgtgtacaagagaatgcagctgatcgaccaaccatgtcagatgttgttgcaatgctaagcagcaagatgatggtcctggctgaacctaagcacccgggatatttcaatgtgagagtggcaaatgaagagcaatctgtccttactgagccatgtagtgttaatgatatgaccatatctgtcataagtgctagatag
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| Protein seq | MDIVVGVLLILGLMPMPFEVIMAAADDGGRVFCDNLRLVSATLPNKTSSSLHHYATAAAGQAPDVVYVLALCRGDLNDTACGKSVANTFTKLINESCDANYTAGAYYGDCAGVYSSHNFLEPSNDGDEMLLDKWNVNNITGDGENVRFIAGLIQQLLSETVETAAGAAGRFATGVVDTGRTFPLVYSLAQCTPDLSAGDCLACLRRLTGMINSTMAVRMGAQIHVTRCYFRYEAYVFYDSKPMLHLTGATVPPPAPAIPKRHKSKLWVIPIVVIPVVAFFCFIVYCGWRRRHRKGIMGLQARRTENLQGDEELVWDLEGKSPEFSVFEFDQGQFSDGTEIAVKRLASHSGQGFIEFKNEVQLIAKLQHRNLVRLLGCCSHGEEKILVYEFLPNKSLDLFIFDENKRALLDWYNRLEIIEGIAHGLLYLHKHSRLSVIHRDLKPSNILLDSEMNPKISDFGLARIFSSNNTEGNKTRRVVGTYGYMAPEYASVGLFSIKSDVFSFGVLFLEILSGKKNSGSHHSGDFINLLGFAWSLWGEGRWHELIDESLVSKYHPAENEIMRCINIALLCVQENAADRPTMSDVVAMLSSKMMVLAEPKHPGYFNVRVANEEQSVLTEPCSVNDMTISVISAR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.069845 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0136500 | RBH | 3.057649 | 3.284944 | 0.271111 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g04730 | RBH | 2.071019 | 2.499659 | 0.069505 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0136500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0001900 | RBH | 0.285215 | 0.0 | 0.378418 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0001870 | RBH | 0.119201 | 0.0 | 0.250902 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0001850 | RBH | 4.353907 | 0.0 | 0.902450 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0001820 | RBH | 0.196613 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0001760 | RBH | 0.0 | 0.0 | 0.535144 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0039400 | RBH | 0.255606 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0001940 | RBH | 0.045639 | 0.0 | 0.114143 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0043800 | RBH | 0 | 0 | 0.004812 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0001840 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0001910 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0001750 | RBH | 0.000000 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0001900 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G001870 | RBH | 0.145451 | 0.0 | 0.335867 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0001770 | RBH | 0.0 | 0.0 | 0.374303 |
