Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_09g0019900 | OGI:09054090 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr09:23378241-23385264 | ||||||||
| Gene Symbol | WAK89B, OsWAK89b, DEES1, WAK91, OsWAK91, OsDEES1 | ||||||||||
| DNA seq | atggtgatgttgtttccatcgccggcgacggcggcgctgctggtgctgctgctgcagctgcagctttggtcggcggaagcgcaggtggcggtgggctcagggccgccggcgggctgcccggacaggtgcggcaacgtgagcgtgccgttcccgtttggcatccgcaccggctgctCcctcgagggattcggcctcacctgcaacaccacgagcaatcccccgcggctgatgatcggcaacagcaccctgcaagtcgtcagcatctcgctggccaactccacgctgcgcgccgtcgacatcgccggcgccgtgaacatcacgtacgacgtcgtcagcggaaccaccggcaacggcacgtggggcggcgtcgccgcgacctcaaccaacccgtacgtcgtctccggggaactcaaccagctcctcgtcacggcgtgcaacattcaggtaacccttgtcggcagcggcggcaacgtcatcaccggctgctcttccttctgctccatcaacgacaagtacacgggtggcgtgttcagaagccccggcaacaagtgcgcgggcatcagttgctgccagacgcccatctccatcggccgcccgtcctacagcgtgaaagtgacgatcatggataacgagtacagaggtgaggtgcccgaagcgatccgcatcgccgagctaggatggttcgacggcctcgccgccaacctgctcaagaagcctgcagcgaatgacacctcgctccggacgccggtcccggtggtgctggagtgggcggtggcatccaccggcctggatgtcacactcgacgccgggctgaacaaacaggctgccaataactggtcctgccccacgcccggcgaggcaagaaggagcgcgtgcataagcaacaacagctactgccacaacgtcaccgacaactaccgaagcggttacgtctgccgttgtgacgacgggtacgacgggaacccgtacgtcgccggcggatgccaggacatcaacgaatgcgagcggccaaaggagcacggctgcttcggcgagtgcaccaaCacgccgggagccttcttgtgcagatgcccgcacggtgcccgtggtaactacagcattccaaatggctgcaccaaatccaatctaggtaactaaagtaatctgctcatcatttttgaatttattcagagattattgtatatatagctacctcctccgtcttacaatatactactccctccgtccctaaatatttaacgccgttgacTttttagcacatatttgaccgtaagtcttattcaaaagcttttgtgaaatatgtaaaactatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatataagtatatttgacaatgaatccaatgataggaaaataattaacaattacttaattttttttaataagacaaacggttaaacatatttaaaaaaaatcaacggcgttaaatatttaagaacagagggagtgtatacctagctttagctatagaagtgactagtgactgttctctcttccaaacaaagatgcaaactctgttattctaatctacaggttaaatgacattaactctgatgagagaacttccttttcctattgtgctcttaggtttaactattggagttggaattggtagtggtgccggcctttttatcctggcacttggtgctgtctttttaacacgtaagattaaacaacggagagcaagaacactaagacagaagttcttcaaacagaaccgtggccatttgttgcaacaattggtatctcaaaaggccgacattgctgaaaggatgatcatccccttggcagaactagaaaaggccacaaataactttgacaattcgcgtgagcttggaggaggaggacatggcaccgtatacaaaggtattctctcagaccttcatgtcgtcgcaatcaagaaatcaaatgtgacagtccaaagggagattgatgagttcataaacgaggtagccattctatcacaaatcaaccaccgcaatgtggtgaaacttttcggatgttgtcttgagaccgaagtgccattattggtttatgaattcatatcaaatggtacgctttatcaccatcttcatgttgaaggaccaacatcattgccatgggaagataggctcagaattgctactgaaacagctagatcccttgcttaccttcactctgctgtgtcattccctataatccacagggatatcaagtcccataatatcctattggatggctcattaacgacaaaagtctcagactttggagcttcaaggtgtatcccagctgaacaaaatggggttacaactgctattcaaggaacactaggatacctagatcccatgtactactacacaggacgtctcacggagaagagtgatatttatagctttggagttgttttaatggagttgcttactaggaaaaaaccacactcatatagatcggctaaggatgagagccttgttgcacatttcactaccctacatgcacatggcaacttgggtgacatacttgatgcgcaggttatggaggaGGggaaaaaggaagttaatgaagtagccgtattagctgtggcatgtgtcaagttAaaagcagaagagcgaccgactatgagacaggtggaaatgacactcgagagcattcgatcatcatcactgcagcaagaagtattgaatagtgttagcacaaagaaatctaaggagcttcatgtctcatggagccatgcaataagcgagggtacaagcttagattcaactaggcaatatagtctcgaagaagagaacttgttatcatcaaggtatcctcgatagtgattttttaatttttcttgtgtgagtttggatcgatatagaaagcttatgttgtcctcgatgtacaaggtctccctagtttttttttctctccatgtatgatacgcacgtagtatttcatagctaaatgtagtaacatcttattttATTGttcttcatctgaatgtgtatttttctgtttgatttcatccaagtaaatgtcaagataccttttgtattgtactaactatggtttcgggctaccaaacgacagctgcttcgttcgttgatgttcgcaactaatcttttgcgtacgcaaaacgaaacgactcattagcatatttttaattaaatattagttcatttttaatatgattgtttaaaacaagttttgtgtaatttactttatttagtagtttaaaaagcttgtacacAaaaagttgtcgacagttcagcgatgatggttccagcgcccagcggcaacttgtgcggcggcgctgtcatctgcagaaacagatttccggggacacaatgccgccagcgatgatctgtagaaacggtcaaccatccagtccaatcgacacctacctgatcgatcggtcaacgcggatacaacaacgcagcatatgcatgtgcggctttggatttgtcaagcaaagcgccccacgtcgtcagtgccgccagtttggactaaattttgccttactaaattttggtattacttaattttgttatagttactaaaattttggcaacttatcacaattttggtaggatttcttatatagttactaaaatttggcagcaaactaaatgtagccactttttttagcaacattaccaaaatttggtaagattgaaaatgacatcaaagtgaacaggcccttagttccaaaccaattttttttggcactgccacatccaatatttgacacatgcgtgaagtattaaatatagaaaaaacaattatacagttcgtcagaaaattgcgagacgaatcttttaagtttaattgtgccatgatttaacaatatgatgctacagtaaatatttactaataacggattaattatacttaataaatttgtctcacagtttttgatggaatatataatttattttattattagactatataaatatgtgtctatatatctaatgtgatatacagtatatgggtaaatttttttgccataggcacgccaaattgcccatacctcattgtatgtgtactacttatatcgacgctctgtctggccatatattaggaatataaacacagactatgttccagcgatgatgaccatcattcaaccaccggctatggcgatggcgatggcgatggcgctgctgctgctgctgcttctgcagctgtggtcggtggaagctcaggtcgcagcgccgccgccggcgagctgcccggacaggtgcggcgacgtgagcgtgccgtacccgttcggcatccgcgacggctgccacctcccgggcttccgcctcacctgcgacgccacccgcaccccgccgcgcctgatgctcggcaacggcaccctccaggtcgtcgacatctccctggccaactccaccgtgcgcgccctcgacctcgccggtgccgtcaacttcacctacgacgtgtcgaagctcgcccccagcggcagcggcacgtggtccagcctcggcaccgtcgccggcgccggcccgtacgtcgtctccgagcagcgcaaccggctcgtcgtcacgggctgcaacgtccaggccacgctcgccggggagaacaccaacatcatcggcggctgctcctccttctgcccggtcagcgagatgttcaccagcgtggcggcgaccgtccccgtcgtccccggcgccggcgccgacaacgccaccgatggcggcttcatctgctccggcaccagctgctgcgagacgcccatcgccatcggccgcccctcctacctcgtgcagttcctcagccttgaccagaaccaggagctcaccggcaagctccccgtcgccgtgcgcatcgccgagcgtgggtggttcgagggcgtcgccggcgagctgctcaacaccagctccgactccgccgccgccctccggacgccggtcccggtggtgctggagtgggtggtgtcgccgacgctggaggcggtgctgcagggcgtcaccgggcagttcgccgacgaccgcaactggtcgtgCcccgcggacgcggcgaggagcgcatgccggagcagcaacagcttctgcagcaacgtcaccggcaactaccgccgcggctatgtgtgcaggtgccggcgaggctacggcgggaacccctacgtcgccggcggatgccaagacatcgacgagtgcaagctcgccgggaggtgctacggcgagtgcaccaacacgccgggagattaccagtgccggtgcccgcgcggcgctcgtggcgacccgcgcattccaaacggctgcgtcaaaactaatctaggtaactacacctacatttttctgctttgacatagtccaatttatgcacagatttttcaaagaatggaaaactaatctaggtactaataactgaaatatcctgcTttacattgtcagtcaaatttatgcagagagctctgcaatgtagttctgttttatacagcagtctttctttaactgttcttccaagtacttgcacgactactctgttttcatagactgatcttgcttttcttattaaccaaatggctgataaattattttacttgatagtgctagctctgcaatgaaactctgtttagtacatcagtctttctttaacagttcagtcaagtactagcaccaactgctatgtttcataaacacaagcatactactctgttttttcatagaccaatctttccataacgttgtttttcttattaaccaactcccatattctagttcataggtgaaatatctaccaactctgatggagatttttgccttctcttgtgtgctaccaggtttaagtgttggtattggagttggcagtggagctgggcttttggtaatgggactgggcgctgcctttttaaaacgtaaggttaagaaacagagagcaagaatgctgaggcagaagttcttcaagcagaaccgaggtcatttgttgcaacaactagtgtctcagaaggctgacattgctgaaaggatgatcatccccttgtcagaactggagaaggccacaaacaattttgataaatcacgtgagcttggaggaggggggcacggcaccgtgtacaaagggattttatcggatcttcatgttgtcgcgatcaagaaatctaaggaggcagttcaaagagagattgacgagttcataaatgaggtagccattctctcgcaaatcaaccatcgtaatgtggtcaaactttttggatgttgtcttgagacagaagtgccattgctggtttatgaattcatatcaaatggtaccctttaccaccatcttcatgttgaaggaccaatgtcattgccatgggaagataggctcagaattgcaaccgaaaccgctagagcacttgcctaccttcactcagctgtgtcgttccctataatccatagggatatcaaatcccataacgtcctattagatggttcactaacaacaaaagtgtccgattttggagcttcaaggtgcattccagctgaacaaactgggataacaaccgctgttcaaggaacactaggatatctagaccccatgtactactacacagggcgtctcactgagaaaagcgatgttttcagcttcggcgtcgttctaatagagttgcttactaggaagaaaccatactcatacagatcatctgatgatgaaagtcttgtagcacatttcactgccctactcacacaaggcaacttgggcgacatacttgatcctcaagtcaaggaagagggaggcgaagaagttaaagagatagctgtgttagctgtggcatgtgccaagctgaaagcagaggagcggcctactatgaggcaggtggagatgacactcgaaagtgttcgattgtcatcacagcagcaagagcatggtgtgggtgcaaagaaatccagggagaatcatgtctcctggagctacccggtaagtgagggtacaagtacacaatcaactagacaatatagccttgaagaagagtatttgttgtcatcaaggtttcccagataatggatttttttttctggagtg
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| CDS seq | atggtgatgttgtttccatcgccggcgacggcggcgctgctggtgctgctgctgcagctgcagctttggtcggcggaagcgcaggtggcggtgggctcagggccgccggcgggctgcccggacaggtgcggcaacgtgagcgtgccgttcccgtttggcatccgcaccggctgctCcctcgagggattcggcctcacctgcaacaccacgagcaatcccccgcggctgatgatcggcaacagcaccctgcaagtcgtcagcatctcgctggccaactccacgctgcgcgccgtcgacatcgccggcgccgtgaacatcacgtacgacgtcgtcagcggaaccaccggcaacggcacgtggggcggcgtcgccgcgacctcaaccaacccgtacgtcgtctccggggaactcaaccagctcctcgtcacggcgtgcaacattcaggtaacccttgtcggcagcggcggcaacgtcatcaccggctgctcttccttctgctccatcaacgacaagtacacgggtggcgtgttcagaagccccggcaacaagtgcgcgggcatcagttgctgccagacgcccatctccatcggccgcccgtcctacagcgtgaaagtgacgatcatggataacgagtacagaggtgaggtgcccgaagcgatccgcatcgccgagctaggatggttcgacggcctcgccgccaacctgctcaagaagcctgcagcgaatgacacctcgctccggacgccggtcccggtggtgctggagtgggcggtggcatccaccggcctggatgtcacactcgacgccgggctgaacaaacaggctgccaataactggtcctgccccacgcccggcgaggcaagaaggagcgcgtgcataagcaacaacagctactgccacaacgtcaccgacaactaccgaagcggttacgtctgccgttgtgacgacgggtacgacgggaacccgtacgtcgccggcggatgccaggacatcaacgaatgcgagcggccaaaggagcacggctgcttcggcgagtgcaccaaCacgccgggagccttcttgtgcagatgcccgcacggtgcccgtggtaactacagcattccaaatggctgcaccaaatccaatctaggtttaactattggagttggaattggtagtggtgccggcctttttatcctggcacttggtgctgtctttttaacacgtaagattaaacaacggagagcaagaacactaagacagaagttcttcaaacagaaccgtggccatttgttgcaacaattggtatctcaaaaggccgacattgctgaaaggatgatcatccccttggcagaactagaaaaggccacaaataactttgacaattcgcgtgagcttggaggaggaggacatggcaccgtatacaaaggtattctctcagaccttcatgtcgtcgcaatcaagaaatcaaatgtgacagtccaaagggagattgatgagttcataaacgaggtagccattctatcacaaatcaaccaccgcaatgtggtgaaacttttcggatgttgtcttgagaccgaagtgccattattggtttatgaattcatatcaaatggtacgctttatcaccatcttcatgttgaaggaccaacatcattgccatgggaagataggctcagaattgctactgaaacagctagatcccttgcttaccttcactctgctgtgtcattccctataatccacagggatatcaagtcccataatatcctattggatggctcattaacgacaaaagtctcagactttggagcttcaaggtgtatcccagctgaacaaaatggggttacaactgctattcaaggaacactaggatacctagatcccatgtactactacacaggacgtctcacggagaagagtgatatttatagctttggagttgttttaatggagttgcttactaggaaaaaaccacactcatatagatcggctaaggatgagagccttgttgcacatttcactaccctacatgcacatggcaacttgggtgacatacttgatgcgcaggttatggaggaGGggaaaaaggaagttaatgaagtagccgtattagctgtggcatgtgtcaagttAaaagcagaagagcgaccgactatgagacaggtggaaatgacactcgagagcattcgatcatcatcactgcagcaagaagtattgaatagtgttagcacaaagaaatctaaggagcttcatctgtggtcggtggaagctcaggtcgcagcgccgccgccggcgagctgcccggacaggtgcggcgacgtgagcgtgccgtacccgttcggcatccgcgacggctgccacctcccgggcttccgcctcacctgcgacgccacccgcaccccgccgcgcctgatgctcggcaacggcaccctccaggtcgtcgacatctccctggccaactccaccgtgcgcgccctcgacctcgccggtgccgtcaacttcacctacgacgtgtcgaagctcgcccccagcggcagcggcacgtggtccagcctcggcaccgtcgccggcgccggcccgtacgtcgtctccgagcagcgcaaccggctcgtcgtcacgggctgcaacgtccaggccacgctcgccggggagaacaccaacatcatcggcggctgctcctccttctgcccggtcagcgagatgttcaccagcgtggcggcgaccgtccccgtcgtccccggcgccggcgccgacaacgccaccgatggcggcttcatctgctccggcaccagctgctgcgagacgcccatcgccatcggccgcccctcctacctcgtgcagttcctcagccttgaccagaaccaggagctcaccggcaagctccccgtcgccgtgcgcatcgccgagcgtgggtggttcgagggcgtcgccggcgagctgctcaacaccagctccgactccgccgccgccctccggacgccggtcccggtggtgctggagtgggtggtgtcgccgacgctggaggcggtgctgcagggcgtcaccgggcagttcgccgacgaccgcaactggtcgtgCcccgcggacgcggcgaggagcgcatgccggagcagcaacagcttctgcagcaacgtcaccggcaactaccgccgcggctatgtgtgcaggtgccggcgaggctacggcgggaacccctacgtcgccggcggatgccaagacatcgacgagtgcaagctcgccgggaggtgctacggcgagtgcaccaacacgccgggagattaccagtgccggtgcccgcgcggcgctcgtggcgacccgcgcattccaaacggctgcgtcaaaactaatctaggtttaagtgttggtattggagttggcagtggagctgggcttttggtaatgggactgggcgctgcctttttaaaacgtaaggttaagaaacagagagcaagaatgctgaggcagaagttcttcaagcagaaccgaggtcatttgttgcaacaactagtgtctcagaaggctgacattgctgaaaggatgatcatccccttgtcagaactggagaaggccacaaacaattttgataaatcacgtgagcttggaggaggggggcacggcaccgtgtacaaagggattttatcggatcttcatgttgtcgcgatcaagaaatctaaggaggcagttcaaagagagattgacgagttcataaatgaggtagccattctctcgcaaatcaaccatcgtaatgtggtcaaactttttggatgttgtcttgagacagaagtgccattgctggtttatgaattcatatcaaatggtaccctttaccaccatcttcatgttgaaggaccaatgtcattgccatgggaagataggctcagaattgcaaccgaaaccgctagagcacttgcctaccttcactcagctgtgtcgttccctataatccatagggatatcaaatcccataacgtcctattagatggttcactaacaacaaaagtgtccgattttggagcttcaaggtgcattccagctgaacaaactgggataacaaccgctgttcaaggaacactaggatatctagaccccatgtactactacacagggcgtctcactgagaaaagcgatgttttcagcttcggcgtcgttctaatagagttgcttactaggaagaaaccatactcatacagatcatctgatgatgaaagtcttgtagcacatttcactgccctactcacacaaggcaacttgggcgacatacttgatcctcaagtcaaggaagagggaggcgaagaagttaaagagatagctgtgttagctgtggcatgtgccaagctgaaagcagaggagcggcctactatgaggcaggtggagatgacactcgaaagtgttcgattgtcatcacagcagcaagagcatggtgtgggtgcaaagaaatccagggagaatcatgtctcctggagctacccggtaagtgagggtacaagtacacaatcaactagacaatatagccttgaagaagagtatttgttgtcatcaaggtttcccagataa
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| Protein seq | MVMLFPSPATAALLVLLLQLQLWSAEAQVAVGSGPPAGCPDRCGNVSVPFPFGIRTGCSLEGFGLTCNTTSNPPRLMIGNSTLQVVSISLANSTLRAVDIAGAVNITYDVVSGTTGNGTWGGVAATSTNPYVVSGELNQLLVTACNIQVTLVGSGGNVITGCSSFCSINDKYTGGVFRSPGNKCAGISCCQTPISIGRPSYSVKVTIMDNEYRGEVPEAIRIAELGWFDGLAANLLKKPAANDTSLRTPVPVVLEWAVASTGLDVTLDAGLNKQAANNWSCPTPGEARRSACISNNSYCHNVTDNYRSGYVCRCDDGYDGNPYVAGGCQDINECERPKEHGCFGECTNTPGAFLCRCPHGARGNYSIPNGCTKSNLGLTIGVGIGSGAGLFILALGAVFLTRKIKQRRARTLRQKFFKQNRGHLLQQLVSQKADIAERMIIPLAELEKATNNFDNSRELGGGGHGTVYKGILSDLHVVAIKKSNVTVQREIDEFINEVAILSQINHRNVVKLFGCCLETEVPLLVYEFISNGTLYHHLHVEGPTSLPWEDRLRIATETARSLAYLHSAVSFPIIHRDIKSHNILLDGSLTTKVSDFGASRCIPAEQNGVTTAIQGTLGYLDPMYYYTGRLTEKSDIYSFGVVLMELLTRKKPHSYRSAKDESLVAHFTTLHAHGNLGDILDAQVMEEGKKEVNEVAVLAVACVKLKAEERPTMRQVEMTLESIRSSSLQQEVLNSVSTKKSKELHLWSVEAQVAAPPPASCPDRCGDVSVPYPFGIRDGCHLPGFRLTCDATRTPPRLMLGNGTLQVVDISLANSTVRALDLAGAVNFTYDVSKLAPSGSGTWSSLGTVAGAGPYVVSEQRNRLVVTGCNVQATLAGENTNIIGGCSSFCPVSEMFTSVAATVPVVPGAGADNATDGGFICSGTSCCETPIAIGRPSYLVQFLSLDQNQELTGKLPVAVRIAERGWFEGVAGELLNTSSDSAAALRTPVPVVLEWVVSPTLEAVLQGVTGQFADDRNWSCPADAARSACRSSNSFCSNVTGNYRRGYVCRCRRGYGGNPYVAGGCQDIDECKLAGRCYGECTNTPGDYQCRCPRGARGDPRIPNGCVKTNLGLSVGIGVGSGAGLLVMGLGAAFLKRKVKKQRARMLRQKFFKQNRGHLLQQLVSQKADIAERMIIPLSELEKATNNFDKSRELGGGGHGTVYKGILSDLHVVAIKKSKEAVQREIDEFINEVAILSQINHRNVVKLFGCCLETEVPLLVYEFISNGTLYHHLHVEGPMSLPWEDRLRIATETARALAYLHSAVSFPIIHRDIKSHNVLLDGSLTTKVSDFGASRCIPAEQTGITTAVQGTLGYLDPMYYYTGRLTEKSDVFSFGVVLIELLTRKKPYSYRSSDDESLVAHFTALLTQGNLGDILDPQVKEEGGEEVKEIAVLAVACAKLKAEERPTMRQVEMTLESVRLSSQQQEHGVGAKKSRENHVSWSYPVSEGTSTQSTRQYSLEEEYLLSSRFPR |
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| Function | Wall-associated receptor kinase 2 [UniProtKB/Swiss-Prot:Q9LMP1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_09g0019900 | OsLima_09g0019900.01 | Chr09 | 23378241 | 23385264 | + | NAM | ||
| CDS seq | atggtgatgttgtttccatcgccggcgacggcggcgctgctggtgctgctgctgcagctgcagctttggtcggcggaagcgcaggtggcggtgggctcagggccgccggcgggctgcccggacaggtgcggcaacgtgagcgtgccgttcccgtttggcatccgcaccggctgctCcctcgagggattcggcctcacctgcaacaccacgagcaatcccccgcggctgatgatcggcaacagcaccctgcaagtcgtcagcatctcgctggccaactccacgctgcgcgccgtcgacatcgccggcgccgtgaacatcacgtacgacgtcgtcagcggaaccaccggcaacggcacgtggggcggcgtcgccgcgacctcaaccaacccgtacgtcgtctccggggaactcaaccagctcctcgtcacggcgtgcaacattcaggtaacccttgtcggcagcggcggcaacgtcatcaccggctgctcttccttctgctccatcaacgacaagtacacgggtggcgtgttcagaagccccggcaacaagtgcgcgggcatcagttgctgccagacgcccatctccatcggccgcccgtcctacagcgtgaaagtgacgatcatggataacgagtacagaggtgaggtgcccgaagcgatccgcatcgccgagctaggatggttcgacggcctcgccgccaacctgctcaagaagcctgcagcgaatgacacctcgctccggacgccggtcccggtggtgctggagtgggcggtggcatccaccggcctggatgtcacactcgacgccgggctgaacaaacaggctgccaataactggtcctgccccacgcccggcgaggcaagaaggagcgcgtgcataagcaacaacagctactgccacaacgtcaccgacaactaccgaagcggttacgtctgccgttgtgacgacgggtacgacgggaacccgtacgtcgccggcggatgccaggacatcaacgaatgcgagcggccaaaggagcacggctgcttcggcgagtgcaccaaCacgccgggagccttcttgtgcagatgcccgcacggtgcccgtggtaactacagcattccaaatggctgcaccaaatccaatctaggtttaactattggagttggaattggtagtggtgccggcctttttatcctggcacttggtgctgtctttttaacacgtaagattaaacaacggagagcaagaacactaagacagaagttcttcaaacagaaccgtggccatttgttgcaacaattggtatctcaaaaggccgacattgctgaaaggatgatcatccccttggcagaactagaaaaggccacaaataactttgacaattcgcgtgagcttggaggaggaggacatggcaccgtatacaaaggtattctctcagaccttcatgtcgtcgcaatcaagaaatcaaatgtgacagtccaaagggagattgatgagttcataaacgaggtagccattctatcacaaatcaaccaccgcaatgtggtgaaacttttcggatgttgtcttgagaccgaagtgccattattggtttatgaattcatatcaaatggtacgctttatcaccatcttcatgttgaaggaccaacatcattgccatgggaagataggctcagaattgctactgaaacagctagatcccttgcttaccttcactctgctgtgtcattccctataatccacagggatatcaagtcccataatatcctattggatggctcattaacgacaaaagtctcagactttggagcttcaaggtgtatcccagctgaacaaaatggggttacaactgctattcaaggaacactaggatacctagatcccatgtactactacacaggacgtctcacggagaagagtgatatttatagctttggagttgttttaatggagttgcttactaggaaaaaaccacactcatatagatcggctaaggatgagagccttgttgcacatttcactaccctacatgcacatggcaacttgggtgacatacttgatgcgcaggttatggaggaGGggaaaaaggaagttaatgaagtagccgtattagctgtggcatgtgtcaagttAaaagcagaagagcgaccgactatgagacaggtggaaatgacactcgagagcattcgatcatcatcactgcagcaagaagtattgaatagtgttagcacaaagaaatctaaggagcttcatctgtggtcggtggaagctcaggtcgcagcgccgccgccggcgagctgcccggacaggtgcggcgacgtgagcgtgccgtacccgttcggcatccgcgacggctgccacctcccgggcttccgcctcacctgcgacgccacccgcaccccgccgcgcctgatgctcggcaacggcaccctccaggtcgtcgacatctccctggccaactccaccgtgcgcgccctcgacctcgccggtgccgtcaacttcacctacgacgtgtcgaagctcgcccccagcggcagcggcacgtggtccagcctcggcaccgtcgccggcgccggcccgtacgtcgtctccgagcagcgcaaccggctcgtcgtcacgggctgcaacgtccaggccacgctcgccggggagaacaccaacatcatcggcggctgctcctccttctgcccggtcagcgagatgttcaccagcgtggcggcgaccgtccccgtcgtccccggcgccggcgccgacaacgccaccgatggcggcttcatctgctccggcaccagctgctgcgagacgcccatcgccatcggccgcccctcctacctcgtgcagttcctcagccttgaccagaaccaggagctcaccggcaagctccccgtcgccgtgcgcatcgccgagcgtgggtggttcgagggcgtcgccggcgagctgctcaacaccagctccgactccgccgccgccctccggacgccggtcccggtggtgctggagtgggtggtgtcgccgacgctggaggcggtgctgcagggcgtcaccgggcagttcgccgacgaccgcaactggtcgtgCcccgcggacgcggcgaggagcgcatgccggagcagcaacagcttctgcagcaacgtcaccggcaactaccgccgcggctatgtgtgcaggtgccggcgaggctacggcgggaacccctacgtcgccggcggatgccaagacatcgacgagtgcaagctcgccgggaggtgctacggcgagtgcaccaacacgccgggagattaccagtgccggtgcccgcgcggcgctcgtggcgacccgcgcattccaaacggctgcgtcaaaactaatctaggtttaagtgttggtattggagttggcagtggagctgggcttttggtaatgggactgggcgctgcctttttaaaacgtaaggttaagaaacagagagcaagaatgctgaggcagaagttcttcaagcagaaccgaggtcatttgttgcaacaactagtgtctcagaaggctgacattgctgaaaggatgatcatccccttgtcagaactggagaaggccacaaacaattttgataaatcacgtgagcttggaggaggggggcacggcaccgtgtacaaagggattttatcggatcttcatgttgtcgcgatcaagaaatctaaggaggcagttcaaagagagattgacgagttcataaatgaggtagccattctctcgcaaatcaaccatcgtaatgtggtcaaactttttggatgttgtcttgagacagaagtgccattgctggtttatgaattcatatcaaatggtaccctttaccaccatcttcatgttgaaggaccaatgtcattgccatgggaagataggctcagaattgcaaccgaaaccgctagagcacttgcctaccttcactcagctgtgtcgttccctataatccatagggatatcaaatcccataacgtcctattagatggttcactaacaacaaaagtgtccgattttggagcttcaaggtgcattccagctgaacaaactgggataacaaccgctgttcaaggaacactaggatatctagaccccatgtactactacacagggcgtctcactgagaaaagcgatgttttcagcttcggcgtcgttctaatagagttgcttactaggaagaaaccatactcatacagatcatctgatgatgaaagtcttgtagcacatttcactgccctactcacacaaggcaacttgggcgacatacttgatcctcaagtcaaggaagagggaggcgaagaagttaaagagatagctgtgttagctgtggcatgtgccaagctgaaagcagaggagcggcctactatgaggcaggtggagatgacactcgaaagtgttcgattgtcatcacagcagcaagagcatggtgtgggtgcaaagaaatccagggagaatcatgtctcctggagctacccggtaagtgagggtacaagtacacaatcaactagacaatatagccttgaagaagagtatttgttgtcatcaaggtttcccagataa
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| Protein seq | MVMLFPSPATAALLVLLLQLQLWSAEAQVAVGSGPPAGCPDRCGNVSVPFPFGIRTGCSLEGFGLTCNTTSNPPRLMIGNSTLQVVSISLANSTLRAVDIAGAVNITYDVVSGTTGNGTWGGVAATSTNPYVVSGELNQLLVTACNIQVTLVGSGGNVITGCSSFCSINDKYTGGVFRSPGNKCAGISCCQTPISIGRPSYSVKVTIMDNEYRGEVPEAIRIAELGWFDGLAANLLKKPAANDTSLRTPVPVVLEWAVASTGLDVTLDAGLNKQAANNWSCPTPGEARRSACISNNSYCHNVTDNYRSGYVCRCDDGYDGNPYVAGGCQDINECERPKEHGCFGECTNTPGAFLCRCPHGARGNYSIPNGCTKSNLGLTIGVGIGSGAGLFILALGAVFLTRKIKQRRARTLRQKFFKQNRGHLLQQLVSQKADIAERMIIPLAELEKATNNFDNSRELGGGGHGTVYKGILSDLHVVAIKKSNVTVQREIDEFINEVAILSQINHRNVVKLFGCCLETEVPLLVYEFISNGTLYHHLHVEGPTSLPWEDRLRIATETARSLAYLHSAVSFPIIHRDIKSHNILLDGSLTTKVSDFGASRCIPAEQNGVTTAIQGTLGYLDPMYYYTGRLTEKSDIYSFGVVLMELLTRKKPHSYRSAKDESLVAHFTTLHAHGNLGDILDAQVMEEGKKEVNEVAVLAVACVKLKAEERPTMRQVEMTLESIRSSSLQQEVLNSVSTKKSKELHLWSVEAQVAAPPPASCPDRCGDVSVPYPFGIRDGCHLPGFRLTCDATRTPPRLMLGNGTLQVVDISLANSTVRALDLAGAVNFTYDVSKLAPSGSGTWSSLGTVAGAGPYVVSEQRNRLVVTGCNVQATLAGENTNIIGGCSSFCPVSEMFTSVAATVPVVPGAGADNATDGGFICSGTSCCETPIAIGRPSYLVQFLSLDQNQELTGKLPVAVRIAERGWFEGVAGELLNTSSDSAAALRTPVPVVLEWVVSPTLEAVLQGVTGQFADDRNWSCPADAARSACRSSNSFCSNVTGNYRRGYVCRCRRGYGGNPYVAGGCQDIDECKLAGRCYGECTNTPGDYQCRCPRGARGDPRIPNGCVKTNLGLSVGIGVGSGAGLLVMGLGAAFLKRKVKKQRARMLRQKFFKQNRGHLLQQLVSQKADIAERMIIPLSELEKATNNFDKSRELGGGGHGTVYKGILSDLHVVAIKKSKEAVQREIDEFINEVAILSQINHRNVVKLFGCCLETEVPLLVYEFISNGTLYHHLHVEGPMSLPWEDRLRIATETARALAYLHSAVSFPIIHRDIKSHNVLLDGSLTTKVSDFGASRCIPAEQTGITTAVQGTLGYLDPMYYYTGRLTEKSDVFSFGVVLIELLTRKKPYSYRSSDDESLVAHFTALLTQGNLGDILDPQVKEEGGEEVKEIAVLAVACAKLKAEERPTMRQVEMTLESVRLSSQQQEHGVGAKKSRENHVSWSYPVSEGTSTQSTRQYSLEEEYLLSSRFPR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0561600 | RBH | 0.098040 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g38850 | RBH | 0.062474 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0561600 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0019690 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0019770 | SBH | 0.0 | 4.691954 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0019990 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0019760 | SBH | 0.0 | 0.011778 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0019970 | SBH | 0.030597 | 0.000000 | 0.120815 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0378400 | RBH | 0.013234 | 0.310474 | 0.0933855 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0019800 | RBH | 0.0 | 0.000000 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0367200 | RBH | 0.223576 | 7.4398185 | 0.196368 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0019880 | RBH | 0.0 | 0.335794 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0019610 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0019660 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0019650 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0019780 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G020160 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0019950 | RBH | 0.0 | 0.0 | 0.0 |
