Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_09g0014350 | OGI:09054040 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr09:19201882-19205595 | ||||||||
| Gene Symbol | HSP82B, OsHSP82, hsp82B, HSP82 | ||||||||||
| DNA seq | agcatatcaaaaaaattgtatcaaagatagatgtactactacgatgtaaagagatgggggcaacagagaaaaaaaaaaggcccattcaagctaagaacaaagtggagataatgcagaacaaagagttactataaaagggctaatgcagaataagaaaatacagattctggattaattaactagcatatttaaatttaaaacgtaactgtttgagcaaataccacgaaatgttcaggcgctaagatacggcaataccgatacatccagcatagcaaaaatggcgaagagcacagagtcagataaagctatagagaactagggctccaggagatgggggccgaatgacaaccatggcgcttagtcgacctcctccatcttgctctcgccggcgtcgtcctccagcggcggcatgtcggcgtcagcctcagcagactcgtcctcgtcgatgctcaggccgagcttgagcatccggtggatcctggtgccgaaggtgttggggtcctcaaggctgaagccggaggtcaggagggcagtctcgaagagcagcatcaccaggtccttcacagacttgtcgttcttgtcagcatcggcacgcttgcggagctcgtccatgatggaattctccgggttgatctccatggtcttcttgctcgacatgtagccggccatgctggagtccctcagagcctgggccttcatgatcctctccatgttagcagtccagccatactccccagtgactagacagcagggagagtccaccacacggtcagagacaacaaccttctccaccttgtcaccgagcacctccttgatcaccttgcacagaccctcgaacttctccttgagttcctcctgccgcttcttctcgtcctcactctcatcaagcttcagaccttccttggtggcagagacgagcttcttgccttcaaactccttaagctgaccaacagcgtactcatcaatggcatcaaccatgtacaggacttcataacccttcttcttcagcttctcaaggaagggggagttctcaacagccttcttgctctcaccagtgatgtaatagatctcactctggccctccttcatccgggttacgtagtccttgaggctggtcaactcatcaccactcttggtggagtgatacctcaggagctcagcaatcttggtcctgttggtggagtcctcatggatgccaagcttgagattcttggagaaggcctcgtagaacttgttgtagtcttccttgttctcagcgatctcaaagaagagctccacgcacttcttcacaaggttcttgcggatcaccttcaggatcttgttctgctggagcatctcacgtgagatgttgaggggaaggtcttcagaatcaacaatgcccttgacaaagctgagccactctgggatcaactcctcacagttgtccatgataaacacccggcgtacgtacagcttgatgttgttttgcttcttcctggtgtcaaagaggtcaaatggcgctctctttggtacaaacaggatggccttgaattcaagctgaccctccacagagaagtgcttgacagccagatgttcctcccagtcgtttgtcaagctcttgtagaatgcagcatactcttccttggtgatctcctctggcttcctcaaccaaataggtttctgcttgttcatcacgttccactcatgagagacttccttgatcttcttctttttcttctctttctcttccttctcctcatcaagatcctcaacctttccctcctcagcatccttcttctcttcctcgtcttcatcatcagaaatctccttctcggttgtcttctcagtccataaggagatagggtagctgatgaactcagaatgcttcttcaccagatccttgaggcgacgttcctcaaggtattccagctgcaagtaaaaattgctactgtttattataaacaacaaacagtaagaacaaaaaaaacgatacagctaattattggaacaaggtgttatgccattatgcattctgataagaacattggaacaaacaatatataaactgatttgcagaatacaacaaaagagtcacagatcataacaatgtagcatacaaggaagtcacaactacagcacaaaagaacagaaagacaagctgaaagcagtaaatctcaaaattcatttcatgttaacggaaaacagtaagatgtatactacaccaaatatatattgttacaactaatactattgtttaattaagtgattactaccaaagaaacccatatcactagttcagaattacggtttatcagcaatgttgattttcagtaaatgtaaccaagagaacaagataccactattccaaaaactgctgtacaaccctaatctatacagttcatttattgtactacaaaatgagcaccatgtcatcaagacaacctcttattaaagtagcaagaatatttcttcagaacatgctaacagtcaagaaagatcatgtacactggtagcatgccaactcaaccatacaggcccgaactcatccaattgtcatatgtacagaacatctaaagttctgacaaaaaaaacatcacatggacagcaacatatatcacacaagtaataggaattcacaagagaaatgtgctgaatcttatacctgatcatccttgaggtagagggtgatcttagtaccccgtccaagctgctcaccagaggtatcacgtgtaacagtgaaggacccaccggcctgtgactcccacacatactgctcgtcgtcgttgtgcttggtggtcacaacaaccctctcagcaacgaggtaggcggagtagaacccgacaccaaactgcccaatcatggacacatcagcaccagcagcgagcgcctccatgaactccttggtccccgacctggcgatggtaccgaggttgttgacgaggtccgacttggtcatgccgacaccactgtcgatgatcgacagggtgttgctagccttgtcggggacaatgtggatgaacagctccggctgcgcatcgagcttgctcttgtccgtgaggctctcgaacctaatcttatccaatgcctgcagaaaccacacacacccatgtcacatcgaattcatcacccaaacacacagatctgtaaaagcatcagcacactaccacactatacagattacacgcacgggtaaacacacaaccctcgctgatttgtaacaagtttatgctagtgctcagatgtggccatattcacatttcgatgagtaaaacaaacaaataaactagcacaaactctacagatcacgagtcaacgctcacacctcattgatttgaaacaggtctacgccctatcagtatatgatcctcagatgccgtcacgctcacagatcgacgcgtacaacaacagcaaagagcacataagcaagcaccgatttcgattcctcgacgagaggggattaatttcgggggcggcgcaaacttacatcggaggagttggagatgagctcgcggaggaagatctccttgttggagtagaaggtgttgatgatgagggacagcagctggttgatctcggcctggaaggcgaacgtctcggtctccgacgccatggccgcgcgccttgcgtgctcctgatctctcgccggcgggaagaggagctcgcgggcggaggagacgacgcgcggctgcggctgcggctgcggcggcggctagggttaggagagggttttgagag
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| CDS seq | atgggtgcattggataagattaggttcgagagcctcacggacaagagcaagctcgatgcgcagccggagctgttcatccacattgtccccgacaaggctagcaacaccctgtcgatcatcgacagtggtgtcggcatgaccaagtcggacctcgtcaacaacctcggtaccatcgccaggtcggggaccaaggagttcatggaggcgctcgctgctggtgctgatgtgtccatgattgggcagtttggtgtcgggttctactccgcctacctcgttgctgagagggttgttgtgaccaccaagcacaacgacgacgagcagtatgtgtgggagtcacaggccggtgggtccttcactgttacacgtgatacctctggtgagcagcttggacggggtactaagatcaccctctacctcaaggatgatcagctggaataccttgaggaacgtcgcctcaaggatctggtgaagaagcattctgagttcatcagctaccctatctccttatggactgagaagacaaccgagaaggagatttctgatgatgaagacgaggaagagaagaaggatgctgaggagggaaaggttgaggatcttgatgaggagaaggaagagaaagagaagaaaaagaagaagatcaaggaagtctctcatgagtggaacgtgatgaacaagcagaaacctatttggttgaggaagccagaggagatcaccaaggaagagtatgctgcattctacaagagcttgacaaacgactgggaggaacatctggctgtcaagcacttctctgtggagggtcagcttgaattcaaggccatcctgtttgtaccaaagagagcgccatttgacctctttgacaccaggaagaagcaaaacaacatcaagctgtacgtacgccgggtgtttatcatggacaactgtgaggagttgatcccagagtggctcagctttgtcaagggcattgttgattctgaagaccttcccctcaacatctcacgtgagatgctccagcagaacaagatcctgaaggtgatccgcaagaaccttgtgaagaagtgcgtggagctcttctttgagatcgctgagaacaaggaagactacaacaagttctacgaggccttctccaagaatctcaagcttggcatccatgaggactccaccaacaggaccaagattgctgagctcctgaggtatcactccaccaagagtggtgatgagttgaccagcctcaaggactacgtaacccggatgaaggagggccagagtgagatctattacatcactggtgagagcaagaaggctgttgagaactcccccttccttgagaagctgaagaagaagggttatgaagtcctgtacatggttgatgccattgatgagtacgctgttggtcagcttaaggagtttgaaggcaagaagctcgtctctgccaccaaggaaggtctgaagcttgatgagagtgaggacgagaagaagcggcaggaggaactcaaggagaagttcgagggtctgtgcaaggtgatcaaggaggtgctcggtgacaaggtggagaaggttgttgtctctgaccgtgtggtggactctccctgctgtctagtcactggggagtatggctggactgctaacatggagaggatcatgaaggcccaggctctgagggactccagcatggccggctacatgtcgagcaagaagaccatggagatcaacccggagaattccatcatggacgagctccgcaagcgtgccgatgctgacaagaacgacaagtctgtgaaggacctggtgatgctgctcttcgagactgccctcctgacctccggcttcagccttgaggaccccaacaccttcggcaccaggatccaccggatgctcaagctcggcctgagcatcgacgaggacgagtctgctgaggctgacgccgacatgccgccgctggaggacgacgccggcgagagcaagatggaggaggtcgactaa
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| Protein seq | MGALDKIRFESLTDKSKLDAQPELFIHIVPDKASNTLSIIDSGVGMTKSDLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLYLKDDQLEYLEERRLKDLVKKHSEFISYPISLWTEKTTEKEISDDEDEEEKKDAEEGKVEDLDEEKEEKEKKKKKIKEVSHEWNVMNKQKPIWLRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKQNNIKLYVRRVFIMDNCEELIPEWLSFVKGIVDSEDLPLNISREMLQQNKILKVIRKNLVKKCVELFFEIAENKEDYNKFYEAFSKNLKLGIHEDSTNRTKIAELLRYHSTKSGDELTSLKDYVTRMKEGQSEIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKRQEELKEKFEGLCKVIKEVLGDKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENSIMDELRKRADADKNDKSVKDLVMLLFETALLTSGFSLEDPNTFGTRIHRMLKLGLSIDEDESAEADADMPPLEDDAGESKMEEVD |
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| Function | Heat shock protein 81-2 [UniProtKB/Swiss-Prot:Q69QQ6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_09g0014350 | OsLima_09g0014350.01 | Chr09 | 19201882 | 19204968 | - | NAM | ||
| CDS seq | atgggtgcattggataagattaggttcgagagcctcacggacaagagcaagctcgatgcgcagccggagctgttcatccacattgtccccgacaaggctagcaacaccctgtcgatcatcgacagtggtgtcggcatgaccaagtcggacctcgtcaacaacctcggtaccatcgccaggtcggggaccaaggagttcatggaggcgctcgctgctggtgctgatgtgtccatgattgggcagtttggtgtcgggttctactccgcctacctcgttgctgagagggttgttgtgaccaccaagcacaacgacgacgagcagtatgtgtgggagtcacaggccggtgggtccttcactgttacacgtgatacctctggtgagcagcttggacggggtactaagatcaccctctacctcaaggatgatcagctggaataccttgaggaacgtcgcctcaaggatctggtgaagaagcattctgagttcatcagctaccctatctccttatggactgagaagacaaccgagaaggagatttctgatgatgaagacgaggaagagaagaaggatgctgaggagggaaaggttgaggatcttgatgaggagaaggaagagaaagagaagaaaaagaagaagatcaaggaagtctctcatgagtggaacgtgatgaacaagcagaaacctatttggttgaggaagccagaggagatcaccaaggaagagtatgctgcattctacaagagcttgacaaacgactgggaggaacatctggctgtcaagcacttctctgtggagggtcagcttgaattcaaggccatcctgtttgtaccaaagagagcgccatttgacctctttgacaccaggaagaagcaaaacaacatcaagctgtacgtacgccgggtgtttatcatggacaactgtgaggagttgatcccagagtggctcagctttgtcaagggcattgttgattctgaagaccttcccctcaacatctcacgtgagatgctccagcagaacaagatcctgaaggtgatccgcaagaaccttgtgaagaagtgcgtggagctcttctttgagatcgctgagaacaaggaagactacaacaagttctacgaggccttctccaagaatctcaagcttggcatccatgaggactccaccaacaggaccaagattgctgagctcctgaggtatcactccaccaagagtggtgatgagttgaccagcctcaaggactacgtaacccggatgaaggagggccagagtgagatctattacatcactggtgagagcaagaaggctgttgagaactcccccttccttgagaagctgaagaagaagggttatgaagtcctgtacatggttgatgccattgatgagtacgctgttggtcagcttaaggagtttgaaggcaagaagctcgtctctgccaccaaggaaggtctgaagcttgatgagagtgaggacgagaagaagcggcaggaggaactcaaggagaagttcgagggtctgtgcaaggtgatcaaggaggtgctcggtgacaaggtggagaaggttgttgtctctgaccgtgtggtggactctccctgctgtctagtcactggggagtatggctggactgctaacatggagaggatcatgaaggcccaggctctgagggactccagcatggccggctacatgtcgagcaagaagaccatggagatcaacccggagaattccatcatggacgagctccgcaagcgtgccgatgctgacaagaacgacaagtctgtgaaggacctggtgatgctgctcttcgagactgccctcctgacctccggcttcagccttgaggaccccaacaccttcggcaccaggatccaccggatgctcaagctcggcctgagcatcgacgaggacgagtctgctgaggctgacgccgacatgccgccgctggaggacgacgccggcgagagcaagatggaggaggtcgactaa
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| Protein seq | MGALDKIRFESLTDKSKLDAQPELFIHIVPDKASNTLSIIDSGVGMTKSDLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLYLKDDQLEYLEERRLKDLVKKHSEFISYPISLWTEKTTEKEISDDEDEEEKKDAEEGKVEDLDEEKEEKEKKKKKIKEVSHEWNVMNKQKPIWLRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKQNNIKLYVRRVFIMDNCEELIPEWLSFVKGIVDSEDLPLNISREMLQQNKILKVIRKNLVKKCVELFFEIAENKEDYNKFYEAFSKNLKLGIHEDSTNRTKIAELLRYHSTKSGDELTSLKDYVTRMKEGQSEIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKRQEELKEKFEGLCKVIKEVLGDKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENSIMDELRKRADADKNDKSVKDLVMLLFETALLTSGFSLEDPNTFGTRIHRMLKLGLSIDEDESAEADADMPPLEDDAGESKMEEVD
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_09g0014350 | OsLima_09g0014350.02 | Chr09 | 19201882 | 19205595 | - | IsoSeq | ||
| CDS seq | ctctcaaaaccctctcctaaccctagccgccgccgcagccgcagccgcagccgcgcgtcgtctcctccgcccgcgagctcctcttcccgccggcgagagatcaggagcacgcaaggcgcgcggccatggcgtcggagaccgagacgttcgccttccaggccgagatcaaccagctgctgtccctcatcatcaacaccttctactccaacaaggagatcttcctccgcgagctcatctccaactcctccgatgcattggataagattaggttcgagagcctcacggacaagagcaagctcgatgcgcagccggagctgttcatccacattgtccccgacaaggctagcaacaccctgtcgatcatcgacagtggtgtcg
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| Protein seq | LSKPSPNPSRRRSRSRSRASSPPPASSSSRRREIRSTQGARPWRRRPRRSPSRPRSTSCCPSSSTPSTPTRRSSSASSSPTPPMHWIRLGSRASRTRASSMRSRSCSSTLSPTRLATPCRSSTVVS |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| AF | Chr09 | 19204945 | 19205595 | - | OsLima_09g0014350.01 | OsLima_09g0014350.01,OsLima_09g0014350.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 4.073297 | 6.193643 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0482600 | SBH | 23.870995 | 21.182684 | 105.126541 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g30412 | SBH | 18.009653 | 16.293974 | 22.715530 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0482600 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0014360 | RBH | 14.717079 | 81.968086 | 79.896667 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0014310 | RBH | 3.691566 | 62.906052 | 34.155369 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0014570 | RBH | 21.138094 | 105.886795 | 91.087425 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0014390 | RBH | 2.816261 | 8.906819 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0014480 | RBH | 82.134857 | 607.246033 | 280.900757 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0309300 | SBH | 141.5482635 | 696.948883 | 713.098999 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0014400 | SBH | 2.670506 | 14.365153 | 14.051429 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0299800 | SBH | 119.721342 | 169.279625 | 116.4644585 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0020150 | SBH | 3.117056 | 7.874446 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0014200 | RBH | 4.760917 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0014240 | RBH | 57.094334 | 535.244751 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0014140 | RBH | 11.310335 | 0.0 | 26.138554 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0014230 | SBH | 1.503621 | 66.853683 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G014690 | RBH | 7.454729 | 149.214157 | 48.709187 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0014450 | RBH | 20.873028 | 293.623230 | 104.581551 |
