Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_09g0005660 | OGI:09028030 | 15/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr09:9993514-9999478 | ||||||||
| Gene Symbol | PI56, Pi56, qBR9.1, Pi56(t) | ||||||||||
| DNA seq | atgaatagtttgttgaagcaagcagcttaccccttcaacatccgtaggaatgtgcaggatctcatcacgcatacggatgatctggtcgccaggagacacgacattgctcgacagatcgaggctgctgatcgggacggcggaatgatcccaacccatgaagcacggcaatggctggacagagtggagagtgccaggctctctgcagacacgatccgtggacgctacgagcagagatgcagaatgttcggcggctgctccctcaatctctggtccaactacagaatcagcaagcgtgcagcggagaggctcgcgattgtgagatcgtacgaggttgttccgagcccgatcacaatcgatccccccgcactcgctgcggtgaacatcccgatcgagtctgtccagattcatagccaggagagtatactcgaggaggcgctccggtgcatcaccgaggggccatcggcgataatcgggatatgcggtccgggtggagtcggcaaaacacacctcctaaagagaatcaacaacaactttgtcggagactctacctttcgtctcgtcatctttgtcacagcgacaagagggtgttcggtgcagacgatccagactcagatcatggagaggatcaacttgaatcgagacggtgattcggtcacacgggccaacaggatagtgcgatttctcaaggcgaaaagcttcctcctattagtggatgacctctggggaggagagctggagatgggatcagttggtatcccatatccccttaagaacgaaggccaacttaagcagaaagtggtaatcacaacaaggtctccaaccatatgcgaactgatgaatgtgacgacacatgtaaaggtggaggtgttagaggacgacgaagcacgcgagctgtttatggaatataatggtcacaagggtctctattctgatccccacatcggagatcttgccaaagaactcgtgaaggaactgaaaggtgttgcatcacagttgatacatttcggcaaggaaatgcgcgggagaaaagatccgaagcggtgggaagatgccatttttgtagtgaagacatcagatactactcacctgcaggatgaggaccaattatctctggtaagtgtgctgtgaactcttatcttggttaaggatttttatgtttggagaactattctctatgtccttaaaataaatcaaactcccacatccccaatacaactttagtagtgaggaaacaaaaaaaaactacagtaaccttcattaataaaaagtaggtgggttgatagttaaaaagtattgaagagataaaacttcatgtttcgtggactggggataggtaagaagctagcaagtgatttattttgggacagatcgaagtatattttacattattgaatattcttccatcctccaaatcaattttggtatcttgaggtacttaggggctgttcagattgtagcctaaataaaccttaccaaattttggcaatttgacaatattgccaagttttggcaggatttgttgtgtattaccaaagtttgataaaaaaaataaatggatgcacatctttgacaactttatttaaaaaatggtatggtttaaaatggtattaatctaaataaccacttagtacctggaggtaaacaaaatgtggtatcttccggtactttctcaagatgataaaatcattcttatttcttagagcagctttacggtccttgaggaggtaccataagataccaaaaatttagtataaaatttgatacctcatagtatacaagtacccagaggtaccaaatttacaatagaaaaagtggtacctcatgatatacttatgtttctagtgagcactcgttaattagcctcccccggtacagcctggtcatccgatcctttgtgtttttattggctaattggctaccatgtcatcaccaaattggcaaaaccattaccatgttagcactatgaccaagttatactggacccgcggctagtaatttttagatggtttgaagagttaaagggttgaatcacatcaagttttaaatcttaaggaggagatgtcagaaaccgacaaatagccaaacaataaactgtgacctatcatagctacatgagcattgaaaaatgatcaccagaccctgtccacacacaggcaaggaaagagactcctatcgaaacaaagcgttaaaaagagaaggaacgacataactctttactggagttcaactgtaatttgtctttgatattttgacttaatcttagcttagctccaatccttaacattaactcaattctgttcattttgctttcaagaaaggaacaattgtgaggaatctcaaggtggcaaccgagaatatgcttgcgaggagcaacgaagtccgccaaaagattgagattgcagagcgaaatggcaagacaccaacgaatggggtgatctcgtggctacgtagagtggatagcatcacatcttctgcagaaataatatgtgggcaacaccaactgaacttagatgttagccagagtgcggctgagaagcttcatgaggtccaagaatgccttgacaatcagcccagcgatattgttgtcgatgttctccaaacccctaccgaatacatcccaatccagtcttttgaactgcgaagccaaaacattgttcttcaggatgctctccggtacattgcggatgattcagtggaaatgattggaatacggggtgcagGGTGGGCAAAACACATATTCTAAAGAAGATCAATAACTCATTCCATGAACATTCTGACTTTCAGTTTGTCATTTTTATCACGGCCTCAAGAAACATCAGGGAACAGATTGCAAGGAGGCTGGGGATAAACCAAGACGACCGTGACGCAAAACTTGTTACCAGGATTTCGAAATTCCTTGAGAAAAGAAGTTTCCTTCTGTTGGTGGATGACCTCAGGGAGATTCTTGACCCAAAAGAAGCAGGCATCCCATTTCCCCTTAGAAACTCAAGTGAAATTAGACAGAAAGTGGTATTTACTACAAGATCAGAACATATATGCGGTCAAaatggcagtgagcaaaaagataaaagtgacttgtttagagcaagatgaggcaatctatttatttagacaaaatgttgatatggggattcttcactctagccctcgtattgaagaactcgctaatactcttgctaaagaactgagtggcctaccattggccttgataactacagcaagagcaatgtcctcaagacatcatccaacaggatgggaggatgcaattcgtgagatgcatgatttgttccgtcataaggataatcccttaaacatggaaaagggtgtttaccaaccgataaagttcagttatgacagtctgagaaatgatacattgaaacaatgtttcttgacatgctcaatgtggccagtggatcagaatattcgaaaggatgaactcgttcagtgttggatgggtctaggtctagtggatgagcctaatatacgatcttcatacaacgaagcatataagctaatttgcgaccttgaagctgcatgtttattagaaagtggtccaaacaatgatgttaaaatgcaaaatgtgatccgtgataccgctctttggatatctcatggcaagtgggttgttcacactggaagggtaagctcaggtcccttcagaaatgcaggacattttccaaacattttcaaaatatcgcctccggaaattctagtggaaccatcgccagcaaactgggatctattcaataactttcattgggacaaggctatgtgtgtctctttgatgtgcaatagcatgacaaaacttcctaccgttcgcattgatcaggatctttcagaactcaaaatAttatgtcttcaacagaattcattggatgcaaatattgctagagttattcagagattcattgcagttacataccttgatttgagctggaacaaactcgagaatataccagaagaactatgctccttaacaaatttggagtacctcaatttgtcatacaacttttcaatatctgaagtgcccaagtgtcttggattcctcattaaactcaaattcttgtatctgcaaggtaccaacataaagacaataccagacggggtcatatctagtctgacagaattgcaagtgctagacttgttgaatatgtatttcggagaaggaataacgatgtctccagtggagtatgtcccaacaatattacctgagttgggtgccataaataacttgaaagaagtcgatattgttattgaaggctcattccagtatgaattactaagccaatgctgtaacctcccgttaaggctagttgctctacggaaaatggaacagtcatgtgcattgttccggctgtcggaaagtatttttcaagacaacttgcttggaactactttaaattacctggaggtttcagatagcgacatgaacgtaatagaaatttttagaggcgctgaagcaccgaattattgtttcgaggctctcaagaagatcgagttgtttaatctaaaaatgttaaaacatataaagtgcttccgactaagtccacatgatatgtttcccagcctctctgTtttgagggtgtccttctgcgaccggctaaaaaacatctcttgtacaatgtatttgtccaaacttcaacatttagaggtaagttactgcaacagtatcacgcaagcctttgggcacaacatgaacaagtcaacggttccgacattcccatgcctacggtatctaagctttgcatacctggatgggttggagaagatttgcgattctgatgtgacgttcccacagttagagaccctgaaatttacaggttgtccaaatttgatgagccttccattcaaaaaGggaacagtacccctgaatctgagggagctacaattggaagatgtgaaattatggaaaaacttgatatgggaagaagaaggtgtcctagatttgctggaaccctatcttaaaatcaaggttagtccacctaccacttgtcttaggcacaaaacatcgtaactagattaATattttccctacatgtgtgtagactacaaatttttcatacataaaaaacatgtaTtttttttaaaagataatgtgtctgttctttttatgtttgtgctaagccagtcaaatataacttctataacagagagcaaaataaaggctatatgtatggataaatccttagtatcatggttcactatttggaaatgccaagataattcaggggaaccaaaatttaggaaacaattctctcaatttgaacagttccctttaaattatatgacatggcatagtccaaagtgaaaattatttcaatcgatcctgatgtagaataaaagtacgtaataaactcggtgcaaagtgaaacgaggtacaatctacgcagtgcaaagtgcaatttactaaaaaaaaatatagctacaagcacatcttacccatactcaccagtaaacctgacatgtggagaatttcaaaatttttggtccaaaaatgtgagccctgtgtacgatcacacctttctactgtatacaatcctgtggactgtggtcaataaaattaacaaggtttaaaaagtttcgagagatgcaaaaaaaaaaaaaacatgtttcacaatttaccttttTAtagtattgccagctagactcgcagcaaccacaggcatttccaattttcctgtctcaccctgcAAaaaaaaaaaaaaaagagggaaaaaaaagaaattctgtgtattgatcaagagggtgtacagataaaatgcaaattcattctagccaacgtctgctgctgtttatggtatctgaaactggtaatctttttcataagagtatctatctgtttgcaattgtaccttcaagtgttgagtttgactcctgctacaatcttctcaatttgatgcaggagttgcccactgaagaggaattaaccaaagcacttcaatctatgcttccgttctatccatga
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| CDS seq | atgaatagtttgttgaagcaagcagcttaccccttcaacatccgtaggaatgtgcaggatctcatcacgcatacggatgatctggtcgccaggagacacgacattgctcgacagatcgaggctgctgatcgggacggcggaatgatcccaacccatgaagcacggcaatggctggacagagtggagagtgccaggctctctgcagacacgatccgtggacgctacgagcagagatgcagaatgttcggcggctgctccctcaatctctggtccaactacagaatcagcaagcgtgcagcggagaggctcgcgattgtgagatcgtacgaggttgttccgagcccgatcacaatcgatccccccgcactcgctgcggtgaacatcccgatcgagtctgtccagattcatagccaggagagtatactcgaggaggcgctccggtgcatcaccgaggggccatcggcgataatcgggatatgcggtccgggtggagtcggcaaaacacacctcctaaagagaatcaacaacaactttgtcggagactctacctttcgtctcgtcatctttgtcacagcgacaagagggtgttcggtgcagacgatccagactcagatcatggagaggatcaacttgaatcgagacggtgattcggtcacacgggccaacaggatagtgcgatttctcaaggcgaaaagcttcctcctattagtggatgacctctggggaggagagctggagatgggatcagttggtatcccatatccccttaagaacgaaggccaacttaagcagaaagtggtaatcacaacaaggtctccaaccatatgcgaactgatgaatgtgacgacacatgtaaaggtggaggtgttagaggacgacgaagcacgcgagctgtttatggaatataatggtcacaagggtctctattctgatccccacatcggagatcttgccaaagaactcgtgaaggaactgaaaggtgttgcatcacagttgatacatttcggcaaggaaatgcgcgggagaaaagatccgaagcggtgggaagatgccatttttgtagtgaagacatcagatactactcacctgcaggatgaggaccaattatctctgaaaggaacaattgtgaggaatctcaaggtggcaaccgagaatatgcttgcgaggagcaacgaagtccgccaaaagattgagattgcagagcgaaatggcaagacaccaacgaatggggtgatctcgtggctacgtagagtggatagcatcacatcttctgcagaaataatatgtgggcaacaccaactgaacttagatgttagccagagtgcggctgagaagcttcatgaggtccaagaatgccttgacaatcagcccagcgatattgttgtcgatgttctccaaacccctaccgaatacatcccaatccagtcttttgaactgcgaagccaaaacattgttcttcaggatgctctccgGGTGGGCAAAACACATATTCTAAAGAAGATCAATAACTCATTCCATGAACATTCTGACTTTCAGTTTGTCATTTTTATCACGGCCTCAAGAAACATCAGGGAACAGATTGCAAGGAGGCTGGGGATAAACCAAGACGACCGTGACGCAAAACTTGTTACCAGGATTTCGAAATTCCTTGAGAAAAGAAGTTTCCTTCTGTTGGTGGATGACCTCAGGGAGATTCTTGACCCAAAAGAAGCAGGCATCCCATTTCCCCTTAGAAACTCAAGTGAAATTAGACAGAAAGTGGTATTTACTACAAGATCAGAACATATATGCGGTCAAaatggcaagcaagatgaggcaatctatttatttagacaaaatgttgatatggggattcttcactctagccctcgtattgaagaactcgctaatactcttgctaaagaactgagtggcctaccattggccttgataactacagcaagagcaatgtcctcaagacatcatccaacaggatgggaggatgcaattcgtgagatgcatgatttgttccgtcataaggataatcccttaaacatggaaaagggtgtttaccaaccgataaagttcagttatgacagtctgagaaatgatacattgaaacaatgtttcttgacatgctcaatgtggccagtggatcagaatattcgaaaggatgaactcgttcagtgttggatgggtctaggtctagtggatgagcctaatatacgatcttcatacaacgaagcatataagctaatttgcgaccttgaagctgcatgtttattagaaagtggtccaaacaatgatgttaaaatgcaaaatgtgatccgtgataccgctctttggatatctcatggcaagtgggttgttcacactggaagggtaagctcaggtcccttcagaaatgcaggacattttccaaacattttcaaaatatcgcctccggaaattctagtggaaccatcgccagcaaactgggatctattcaataactttcattgggacaaggctatgtgtgtctctttgatgtgcaatagcatgacaaaacttcctaccgttcgcattgatcaggatctttcagaactcaaaatAttatgtcttcaacagaattcattggatgcaaatattgctagagttattcagagattcattgcagttacataccttgatttgagctggaacaaactcgagaatataccagaagaactatgctccttaacaaatttggagtacctcaatttgtcatacaacttttcaatatctgaagtgcccaagtgtcttggattcctcattaaactcaaattcttgtatctgcaaggtaccaacataaagacaataccagacggggtcatatctagtctgacagaattgcaagtgctagacttgttgaatatgtatttcggagaaggaataacgatgtctccagtggagtatgtcccaacaatattacctgagttgggtgccataaataacttgaaagaagtcgatattgttattgaaggctcattccagtatgaattactaagccaatgctgtaacctcccgttaaggctagttgctctacggaaaatggaacagtcatgtgcattgttccggctgtcggaaagtatttttcaagacaacttgcttggaactactttaaattacctggaggtttcagatagcgacatgaacgtaatagaaatttttagaggcgctgaagcaccgaattattgtttcgaggctctcaagaagatcgagttgtttaatctaaaaatgttaaaacatataaagtgcttccgactaagtccacatgatatgtttcccagcctctctgTtttgagggtgtccttctgcgaccggctaaaaaacatctcttgtacaatgtatttgtccaaacttcaacatttagaggtaagttactgcaacagtatcacgcaagcctttgggcacaacatgaacaagtcaacggttccgacattcccatgcctacggtatctaagctttgcatacctggatgggttggagaagatttgcgattctgatgtgacgttcccacagttagagaccctgaaatttacaggttgtccaaatttgatgagccttccattcaaaaaGggaacagtacccctgaatctgagggagctacaattggaagatgtgaaattatggaaaaacttgatatgggaagaagaaggtgtcctagatttgctggaaccctatcttaaaatcaaggagttgcccactgaagaggaattaaccaaagcacttcaatctatgcttccgttctatccatga
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| Protein seq | MNSLLKQAAYPFNIRRNVQDLITHTDDLVARRHDIARQIEAADRDGGMIPTHEARQWLDRVESARLSADTIRGRYEQRCRMFGGCSLNLWSNYRISKRAAERLAIVRSYEVVPSPITIDPPALAAVNIPIESVQIHSQESILEEALRCITEGPSAIIGICGPGGVGKTHLLKRINNNFVGDSTFRLVIFVTATRGCSVQTIQTQIMERINLNRDGDSVTRANRIVRFLKAKSFLLLVDDLWGGELEMGSVGIPYPLKNEGQLKQKVVITTRSPTICELMNVTTHVKVEVLEDDEARELFMEYNGHKGLYSDPHIGDLAKELVKELKGVASQLIHFGKEMRGRKDPKRWEDAIFVVKTSDTTHLQDEDQLSLKGTIVRNLKVATENMLARSNEVRQKIEIAERNGKTPTNGVISWLRRVDSITSSAEIICGQHQLNLDVSQSAAEKLHEVQECLDNQPSDIVVDVLQTPTEYIPIQSFELRSQNIVLQDALRVGKTHILKKINNSFHEHSDFQFVIFITASRNIREQIARRLGINQDDRDAKLVTRISKFLEKRSFLLLVDDLREILDPKEAGIPFPLRNSSEIRQKVVFTTRSEHICGQNGKQDEAIYLFRQNVDMGILHSSPRIEELANTLAKELSGLPLALITTARAMSSRHHPTGWEDAIREMHDLFRHKDNPLNMEKGVYQPIKFSYDSLRNDTLKQCFLTCSMWPVDQNIRKDELVQCWMGLGLVDEPNIRSSYNEAYKLICDLEAACLLESGPNNDVKMQNVIRDTALWISHGKWVVHTGRVSSGPFRNAGHFPNIFKISPPEILVEPSPANWDLFNNFHWDKAMCVSLMCNSMTKLPTVRIDQDLSELKILCLQQNSLDANIARVIQRFIAVTYLDLSWNKLENIPEELCSLTNLEYLNLSYNFSISEVPKCLGFLIKLKFLYLQGTNIKTIPDGVISSLTELQVLDLLNMYFGEGITMSPVEYVPTILPELGAINNLKEVDIVIEGSFQYELLSQCCNLPLRLVALRKMEQSCALFRLSESIFQDNLLGTTLNYLEVSDSDMNVIEIFRGAEAPNYCFEALKKIELFNLKMLKHIKCFRLSPHDMFPSLSVLRVSFCDRLKNISCTMYLSKLQHLEVSYCNSITQAFGHNMNKSTVPTFPCLRYLSFAYLDGLEKICDSDVTFPQLETLKFTGCPNLMSLPFKKGTVPLNLRELQLEDVKLWKNLIWEEEGVLDLLEPYLKIKELPTEEELTKALQSMLPFYP |
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| Function | Disease resistance protein RPS2 [UniProtKB/Swiss-Prot:Q42484] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_09g0005660 | OsLima_09g0005660.01 | Chr09 | 9993514 | 9999478 | + | NAM | ||
| CDS seq | atgaatagtttgttgaagcaagcagcttaccccttcaacatccgtaggaatgtgcaggatctcatcacgcatacggatgatctggtcgccaggagacacgacattgctcgacagatcgaggctgctgatcgggacggcggaatgatcccaacccatgaagcacggcaatggctggacagagtggagagtgccaggctctctgcagacacgatccgtggacgctacgagcagagatgcagaatgttcggcggctgctccctcaatctctggtccaactacagaatcagcaagcgtgcagcggagaggctcgcgattgtgagatcgtacgaggttgttccgagcccgatcacaatcgatccccccgcactcgctgcggtgaacatcccgatcgagtctgtccagattcatagccaggagagtatactcgaggaggcgctccggtgcatcaccgaggggccatcggcgataatcgggatatgcggtccgggtggagtcggcaaaacacacctcctaaagagaatcaacaacaactttgtcggagactctacctttcgtctcgtcatctttgtcacagcgacaagagggtgttcggtgcagacgatccagactcagatcatggagaggatcaacttgaatcgagacggtgattcggtcacacgggccaacaggatagtgcgatttctcaaggcgaaaagcttcctcctattagtggatgacctctggggaggagagctggagatgggatcagttggtatcccatatccccttaagaacgaaggccaacttaagcagaaagtggtaatcacaacaaggtctccaaccatatgcgaactgatgaatgtgacgacacatgtaaaggtggaggtgttagaggacgacgaagcacgcgagctgtttatggaatataatggtcacaagggtctctattctgatccccacatcggagatcttgccaaagaactcgtgaaggaactgaaaggtgttgcatcacagttgatacatttcggcaaggaaatgcgcgggagaaaagatccgaagcggtgggaagatgccatttttgtagtgaagacatcagatactactcacctgcaggatgaggaccaattatctctgaaaggaacaattgtgaggaatctcaaggtggcaaccgagaatatgcttgcgaggagcaacgaagtccgccaaaagattgagattgcagagcgaaatggcaagacaccaacgaatggggtgatctcgtggctacgtagagtggatagcatcacatcttctgcagaaataatatgtgggcaacaccaactgaacttagatgttagccagagtgcggctgagaagcttcatgaggtccaagaatgccttgacaatcagcccagcgatattgttgtcgatgttctccaaacccctaccgaatacatcccaatccagtcttttgaactgcgaagccaaaacattgttcttcaggatgctctccgGGTGGGCAAAACACATATTCTAAAGAAGATCAATAACTCATTCCATGAACATTCTGACTTTCAGTTTGTCATTTTTATCACGGCCTCAAGAAACATCAGGGAACAGATTGCAAGGAGGCTGGGGATAAACCAAGACGACCGTGACGCAAAACTTGTTACCAGGATTTCGAAATTCCTTGAGAAAAGAAGTTTCCTTCTGTTGGTGGATGACCTCAGGGAGATTCTTGACCCAAAAGAAGCAGGCATCCCATTTCCCCTTAGAAACTCAAGTGAAATTAGACAGAAAGTGGTATTTACTACAAGATCAGAACATATATGCGGTCAAaatggcaagcaagatgaggcaatctatttatttagacaaaatgttgatatggggattcttcactctagccctcgtattgaagaactcgctaatactcttgctaaagaactgagtggcctaccattggccttgataactacagcaagagcaatgtcctcaagacatcatccaacaggatgggaggatgcaattcgtgagatgcatgatttgttccgtcataaggataatcccttaaacatggaaaagggtgtttaccaaccgataaagttcagttatgacagtctgagaaatgatacattgaaacaatgtttcttgacatgctcaatgtggccagtggatcagaatattcgaaaggatgaactcgttcagtgttggatgggtctaggtctagtggatgagcctaatatacgatcttcatacaacgaagcatataagctaatttgcgaccttgaagctgcatgtttattagaaagtggtccaaacaatgatgttaaaatgcaaaatgtgatccgtgataccgctctttggatatctcatggcaagtgggttgttcacactggaagggtaagctcaggtcccttcagaaatgcaggacattttccaaacattttcaaaatatcgcctccggaaattctagtggaaccatcgccagcaaactgggatctattcaataactttcattgggacaaggctatgtgtgtctctttgatgtgcaatagcatgacaaaacttcctaccgttcgcattgatcaggatctttcagaactcaaaatAttatgtcttcaacagaattcattggatgcaaatattgctagagttattcagagattcattgcagttacataccttgatttgagctggaacaaactcgagaatataccagaagaactatgctccttaacaaatttggagtacctcaatttgtcatacaacttttcaatatctgaagtgcccaagtgtcttggattcctcattaaactcaaattcttgtatctgcaaggtaccaacataaagacaataccagacggggtcatatctagtctgacagaattgcaagtgctagacttgttgaatatgtatttcggagaaggaataacgatgtctccagtggagtatgtcccaacaatattacctgagttgggtgccataaataacttgaaagaagtcgatattgttattgaaggctcattccagtatgaattactaagccaatgctgtaacctcccgttaaggctagttgctctacggaaaatggaacagtcatgtgcattgttccggctgtcggaaagtatttttcaagacaacttgcttggaactactttaaattacctggaggtttcagatagcgacatgaacgtaatagaaatttttagaggcgctgaagcaccgaattattgtttcgaggctctcaagaagatcgagttgtttaatctaaaaatgttaaaacatataaagtgcttccgactaagtccacatgatatgtttcccagcctctctgTtttgagggtgtccttctgcgaccggctaaaaaacatctcttgtacaatgtatttgtccaaacttcaacatttagaggtaagttactgcaacagtatcacgcaagcctttgggcacaacatgaacaagtcaacggttccgacattcccatgcctacggtatctaagctttgcatacctggatgggttggagaagatttgcgattctgatgtgacgttcccacagttagagaccctgaaatttacaggttgtccaaatttgatgagccttccattcaaaaaGggaacagtacccctgaatctgagggagctacaattggaagatgtgaaattatggaaaaacttgatatgggaagaagaaggtgtcctagatttgctggaaccctatcttaaaatcaaggagttgcccactgaagaggaattaaccaaagcacttcaatctatgcttccgttctatccatga
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| Protein seq | MNSLLKQAAYPFNIRRNVQDLITHTDDLVARRHDIARQIEAADRDGGMIPTHEARQWLDRVESARLSADTIRGRYEQRCRMFGGCSLNLWSNYRISKRAAERLAIVRSYEVVPSPITIDPPALAAVNIPIESVQIHSQESILEEALRCITEGPSAIIGICGPGGVGKTHLLKRINNNFVGDSTFRLVIFVTATRGCSVQTIQTQIMERINLNRDGDSVTRANRIVRFLKAKSFLLLVDDLWGGELEMGSVGIPYPLKNEGQLKQKVVITTRSPTICELMNVTTHVKVEVLEDDEARELFMEYNGHKGLYSDPHIGDLAKELVKELKGVASQLIHFGKEMRGRKDPKRWEDAIFVVKTSDTTHLQDEDQLSLKGTIVRNLKVATENMLARSNEVRQKIEIAERNGKTPTNGVISWLRRVDSITSSAEIICGQHQLNLDVSQSAAEKLHEVQECLDNQPSDIVVDVLQTPTEYIPIQSFELRSQNIVLQDALRVGKTHILKKINNSFHEHSDFQFVIFITASRNIREQIARRLGINQDDRDAKLVTRISKFLEKRSFLLLVDDLREILDPKEAGIPFPLRNSSEIRQKVVFTTRSEHICGQNGKQDEAIYLFRQNVDMGILHSSPRIEELANTLAKELSGLPLALITTARAMSSRHHPTGWEDAIREMHDLFRHKDNPLNMEKGVYQPIKFSYDSLRNDTLKQCFLTCSMWPVDQNIRKDELVQCWMGLGLVDEPNIRSSYNEAYKLICDLEAACLLESGPNNDVKMQNVIRDTALWISHGKWVVHTGRVSSGPFRNAGHFPNIFKISPPEILVEPSPANWDLFNNFHWDKAMCVSLMCNSMTKLPTVRIDQDLSELKILCLQQNSLDANIARVIQRFIAVTYLDLSWNKLENIPEELCSLTNLEYLNLSYNFSISEVPKCLGFLIKLKFLYLQGTNIKTIPDGVISSLTELQVLDLLNMYFGEGITMSPVEYVPTILPELGAINNLKEVDIVIEGSFQYELLSQCCNLPLRLVALRKMEQSCALFRLSESIFQDNLLGTTLNYLEVSDSDMNVIEIFRGAEAPNYCFEALKKIELFNLKMLKHIKCFRLSPHDMFPSLSVLRVSFCDRLKNISCTMYLSKLQHLEVSYCNSITQAFGHNMNKSTVPTFPCLRYLSFAYLDGLEKICDSDVTFPQLETLKFTGCPNLMSLPFKKGTVPLNLRELQLEDVKLWKNLIWEEEGVLDLLEPYLKIKELPTEEELTKALQSMLPFYP
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.039473 | 0.000000 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0322800 | RBH | 0.397424 | 0.247366 | 0.161493 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g16000 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0322800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0005480 | RBH | 0.097004 | 0.000000 | 1.120695 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0005540 | RBH | 0.0 | 0.704537 | 0.480539 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0005680 | RBH | 0.220727 | 0.487780 | 2.033234 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0005560 | RBH | 0.084096 | 0.068945 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0005750 | RBH | 0.960149 | 1.449614 | 3.489120 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0172400 | SBH | 2.3586895 | 15.660743 | 0.492101 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0005920 | RBH | 0.025355 | 0.105082 | 0.392505 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0143600 | RBH | 0.5458285 | 2.193868 | 1.9678605 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0013470 | RBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0005560 | RBH | 0.000000 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0005530 | RBH | 2.888930 | 8.262422 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0005420 | RBH | 0.000000 | 0.0 | 0.124450 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0005510 | RBH | 0.000000 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G005790 | RBH | 0.045130 | 0.0 | 0.285358 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0005660 | RBH | 0.305392 | 0.000000 | 0.822081 |
