Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_08g0022820 | OGI:08076760 | 15/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr08:27721720-27730657 | ||||||||
| Gene Symbol | SCR8, OsSCR8, PIBH8, Pib-H8, PibH8 | ||||||||||
| DNA seq | gcattggcagtagaagcagacccatccacacaatcaaagaagaagagtcagaagaagagaggcgagctggccagcaatggaggcgacggtgctgagcgtgggcaagtcggtgcttggtggagcagttagctatgcccaatccgcgatcgcggaagagggagctttgaagctgggggtccagcgggaccaaagtttcatcagggatgagcttgagatgatgcagtctttcctgctggctgcagacaaagagcataatggacatcatcacgaggtcatcacgacctgggtgaagcaagtacgtgacgtggcctacgacgttgaagactgcctccaagactacgccgcccggttgaagaaaccaccctggtggagcctcccttgcacggtacaccgggagaggcgttgcatcgggaacgagatgaaggagctgagagccaaggttgaggatgtcagccagagaaacatgcgttaccatggtgtgtatgcagctgctccacagtcttcttcttccgttactgctgctgagctgctgcagtccaccaccactatcgacgactttgataaggctagacgtgccgccaagcaacgagaaaaggtggacctctcggagctcatcaccaacgacagacaaggtggacttagagtgattgttgtgtgggaaacaagaagtggacctgctgggacagtgcctgttgttcgagccgcctacgaaaagctcaaaggacagtttgaatgccacgcctgggtaaggctgatgcactcctttgatgcaaacgaattcatggggagcttggtgaggcagttcaaagcaaactctcacgagggtactggcaagacaccacaaggaacaccttctggggtgtctgttctgaatgagatggaagcacaaaattataatttgcttcatgactttactggatatgtgaccaacaagaaatacttggtcgtgcttaatggcctgtctacaatagaagagtgggactggataaaaacttatcttccaaacaatcataacgggagccgagtcctagtgtacacacagcaagctgaagttgcaagctgttgtaccgatgatccgtacaaggtgtctgagattcaacatgaagggtcatttgccaaacctctttatgtcttctacaaggaggtaatggttatatatccaacccttcacgttgatgcagaaaaaaatcataacaaaataatatgcataagttgcaaattcgatttgccttttatttcaggtagggatacaagaaattttggatggaactatgaataccatcactcattcacagtgtttgtataggaaaaaaaaatcttaaatgcagtaacaacataattcaccgtgtcccaaacattatatttcaatatgattctgataaatgacttgatattcaggagtatgttcatcgtattaaggcaccttcttttagataatgatattaaagccacctactagcataagagttcttttccttgtcagctaaagcatgtttgttgttattgatttgaccaatcttcactgaatagttggagtacaatcaaacaaccattttttgtttctcagttatagtgcattcaccaactaaagaaaaaaaaactttgaacaaacaataatccagatcgatcaatataatgcttccattcaactaaatgtacttaattttggaggtagttaactattgtctaatggcattttctttttcaggtggtctctcagtcagttaattcagacctgcctgaaagcagttcacggcctttcctcaacagagattccaacactgcggctgtgaaggaactgactcgcagcgggacacagctcattggtagaggaaaagaaaaggatgatgtcatcaaactgctttctgattgtaatctgaaccatcaagtgatttcggtgtggggaatggttggcattgggaaaaccactctcgtcaaaagcatctatcagagctctgatcttgagaagcttaagtttgagaggcgtgcttgggtaactatatcacacccactcaaagaaactgagctgcttaggagtttagctcagtgtatagatgaagattcccctgaaaagaagggagaatctaagctacggcttgcaaggaatgatttaagcaagatggaactaaatatgttaaggggcaaggtgtcccaagacttagaagggaagaagtacctcattgttcttgatgacctattatctcttgttgagtgggattcgataataagaaacttgcctataaacaacaatggtagccggatcatactaactacaagatttcaagatgttgcgcaacgttgttccaagaaagaaatgtacatgtacaatatcaaaggtctaacagatgaagatgctcgtgagctattcttaactaaggtaaatgctcccacacacatagtactagcttgttttgcccactatgctatatccttcatagatgttagtttcaaatttttatgttttatatatatatatatatatatatatatatatataaaaaaagtagggtcatattgataattaggcttcagaacagggtcaaatgaacaattctccccccatatatatgttagtttcaaataatcaaattatattacaattgtataaattaacaattacgaattttagaatagatcaatttaatttcattattattccccaaaatctaaaattgataattactaatatgtatgtgatatcctaatatgtttttgTttttatatttcttgatcttaataattacacaaatacaaaaataataaatacaaagtcgtaactgtgtggaccttaatttttgttaattcctgaattccttacaaaattttgaattagttaatggaaagtctttggctggagtcttaaattttgccttttgttttgaattgattaataaaatgttaaaggtgttttggattgtcaatttcttaacaaatcagtaacatcgaaatttggaaataataaatatgagatgtactcatcgattgtggagcctaaaaatttagttttcaatttaaaattaataatcattatgttgtacctcacatggccactggtctatctatttatattattaaaatagccttgaaaggagacaccacgttcgctgtggaggctagaaatttctacattaattgaagaaaaagaaaaagttcttaaccgctagttaatagttggtctggattatacaatatagattgattgacatagttatatataaaatataattatatctatataaaaatagtagttaagagttatatatgaaatccatggtgtcgacgttgtagatcacgactacggtatttacatggtatggggatcgttgatgccagggtatatacgagattgaggtaaaagagacggagacaaggatttttgtacaggttcgggtcccctcaacaggtaatagctccgctcctattggccgaagtcggtgttgctctatatatcagtatcacacgagtataattttgggacaatctaatctagctatcgtcgacttgccggcatggatctccacacgtagtcgacgacatagtagtcttcctcgtcgaatatgaactcggcgagatagagtatagcgctaaatcccttatgtggcctttgtggctccaaattgtgtttgtctaggtttgcacttatctcggtgtttgttgatttttgttccctttctttctctcctcctatggggtcttgtatttatacccacagatgtcatcttgtacaagtagaattagggagacacatatggatacgattcgagtagtcctgttagtttccaactctacttttcattccttatctggaacacctttcatatatgaggcatgattccgtataaaactttggtatatagttggccgcaccgagcgtaacccacgattatggtggtatgccttatccataaccctaacacatggattatagaaatagaaggtaagagttgtaatgaaattcagggattatagaaatagaagctaagagttgtacgtgaaatctagagattataaaaatagaatctaagagttgtttatgaaatccagatgctcatagaaatagaagccaagagttgtatatgaaatccaaatagacttacatataatgatacatttagaaacaaaattttagagttgtatattaaatctaactccacatgaattatccagctccgtgtaaaactgcatggggcaatcctctaattcagtataaacctagccatttatctaggtggaaccacatcgcaatgagataagactactaaaagaacaagcgacgctaattgcaacttgctacttattagttttgaattttggaattaaatctatatctgtactctacttaaaaaatttaagttgtttccatcgtagcgtcatttgattatttgaatctgcttccgcccgtgttcctggatacacgccttcccgcttgcaggacaggcgtgtgtatcctgtccggttgatgggctcattcacgacgaaccaatgcaaaaataagcaaaattaactgaagaattggagttcgcctcagagttgttttacacggctaggctaatgcaataaatattgaactggcgctcattagcgatcaccgatcgctcattggcatgtgtccaatagtagtttgtgtgcgtgttggatgacaaattaagccaagatcaattgtgatgacaccagcaaaggatgggccgacaatgacgagatgatccttcttatcagcctgttgctcttgctcgggcagggagcactttgagtgccagaggtgacgacaagcatgttggaactggtgatgatcgaggacacatgattgcacaaagatagagttccactctctaaaatactctcaacgtatcaaaataaataaacctaatacggaatgtgacatatcataatactatgaatctgacaagcctttattcacattcataatattaggatatgccatatctcgaaccagggccatcgacggccatgtgcgaatgcggcggctgcacagggcccacgatttttgaggatactagtctatatcggacacgacacatgtttcctaaagataaaaggaaaaaaatacaagtcctgattggacactacacaaaacttcctaaagataaaggaaagctaattaaacattccctaattaatagatagaatataagttctcatgccatggtcttcatgattccttattgaacttggtcttttctagataaatttttgttagttgattgacctctttccattaccgaatccactaaaaatcttaccaaattttggcattaacacaaacatagtactactttatcttgcagtgcacgccagctacaacttgctaattgaaactcctaaccatgagttaccccccctatcataccccttacaaacccaatcccctctctctcacgcgcgcgtgtgcggacggccggctgcgggctgcaaaggaggaggcgcacgcactcggacggcgggcaggggaggcaaagctcgcccaggcaaccggcggcggagaaggagctcacttgggaggccggcggcggaggcggagatcgcccgggcggcgggcagctgaggccctctctcttctctctgtggcactgtcggaatcggcgacccagtggctggtggcgggggcggcgagggcacgcggctcagcccacgacggcgaccacggcgagcggcggcaactgtagcgagggcacgcaacaagtggctccccccctctctctgtgtgtggcgctgtcaggagagcgggccctgaggccagctgcgggcatggcagggatggtgtgggcctgtggcgcggcctaggacggagctcacgggaaggaatcgacgagcccgccgtctcgacttctctccttctccgcggccggcggcgaaggtccccccacgcctctcccccgccagtgctcgagcgacctcggcctcccccggttaggcggcgcaccctgtctccctctccccttaccgctgcccccactccaccaccaccgccacccccgatctccactcttctgctacgagcgtccccgggacgaggtagggcgcgagggcgtcggcgcccgcgagcgtgagggtgggggatgccaggagggacacggcggcgggctctggcgacgaatccaccgcccatccccgtcgtccccactcgggatgagagagaggagggaagaggggaagaagaggtatgataggtgggtcccaccattttttaaaaagaaaatgttgactggattgccacgtgtacgccacgtaggacaaaaccactctggattgggtcgaggggggtaattcgttcggtaccgaaagttcagggtgagcagtgtctggttttcgggtttaggggggtaattcggtcgcccgcgatagttcaagggggcaattcgtattttttcctatatttattaatttcgtatttcggaatgttgaattaagaaaatagaataagtagaataaagtattagagtggattcttgatacaattttgtaagtactaatttttttaagtattaataaaacaaaattagtttacttgcatacaagctatgtaatataaatagtccatgtgaatgcacatgttaccggctagtataaaataattgattgccatgtctatgtcatccatgtgtatacatccttgtgaggcagattgctttgttatgtatcatgtcgatttttgccttctacattcttttcccttttaaaattaatgaaacaaaattttcggacaactaagattttcaaattttccaaaattttccattgtgattttattattagaaaaaaactagagcacacttccttgtgagtgagaatgaaatctttagatatttcaagtatttagcttgttattaagtgacatttgctgtaggtacgtatggatggtgatgaatccgaattgaaacctgacataatgaaggaagcagaaatcatcataaagaagtgtggccgacttccccttgcagtcgctacagtgggtggtttcttgtctaccagacctcgtaatatcatagaatggagggagtttggtgatcacatcagtgaagaatttgataacaacccaagtcttgagaagatgaagaaaatacttagatcaagctatgacggtttaacttaccacttgaaatcttgcttcttatatatgtcgattttccctagagaccatgacatcagatatagacgattattgaggcgatggactgcagagggttactcaagagcaacgagaaacaggagcaacgagaaagtggcagaagaacagttcaaagctcttctcaacaagagtatgatccaacaatcaaaaacaattgccagcgggaagacaggtttctgcaaagtctataatctcatgcatgaaatcatcatttcaaagtctgaagaagaaaaccttgttcttgttctagatgaccacatcaccccgcactctaaagataaagtacgccaccttgttgtgagcgagaactggagcagagaaaagaacgatatgcaaaatatagtggatgtgtcccacatacgatctctgacggtctttggagagtggagatcatttttcctttctaagaagatgaggatgcttcgggtgcttgatttagaagatgcagaaggtcttcgggattctgaccttgtgccaatcggaaagcttcgtcatttaaagtacttgtctctacgaggatctgaggaaatcttcaatcttccaagttcctttggtaacctgttgaacctggagacactagatatcaggggaacatgggttacgaagttgcctgcaaccattggtaggctacagaacttgaaatatctccatgctggcataccatcaggtgatgagaatgacgccagaatctatggtcagatgctaattatactactgcgtcagttcagatcaatccaaaaaaagacgggaaccaggttccttgtatcatttattatgttgctcatcactgcttggttgagaaacctggatgtttgtggtgttaaagtgccaagagggattggacagtggaggtccattgacacactgagcgtcgtgaacattgcacgggggaaggccatgctgaagaacctcaaaaagctcacccaattgcgcaagctaggtgtaacgggcatcaacaagagtaattgcaaagaactctgttccgccattgccgaccatggccgcttgcagtccatattactgcgagcggagggtaatgctgggttagaaggttgtttggatgacttgtcaccccctcctgaaaaccttgagagcctccaactgtatggcaatctggtgactttaccagaatggattaaggagcttaaaaatatacaaaagctgagccttcgcaacaccaatctgaaggcagatactaccatggaagtgcttggaaacctaccaatgctagccattcttcgtctccaggacaatgcgtgtgaggaggaagaactctgtttcggtcccgagcgtttcacaggtctgacgtcattggagcttctcaattgggagagcctcaagtcggtgaaatttgaaggaggagctactcctaaactgaaggtgctactggtggccaactgttggcaaataaacgatggtgggttttctggcatagaaactctctcgaccctaaaggaagtttcactcttgggctataattatgaccagacatacaccgaattcaaggaacaattacagaagcaacttggcatgaacaagaacaaaccaaatctaagtattctgtagtccaaaactgccacttgttttcatagaagttgctccctccacactcaaatatgtggcattgtgtcattcaggtagtgtttcaaatttcaaaatcatgtataattatgacaatttcaacattaagttttactccgttttttctcatgtaccatacgctttaagtaattaagtgtataagtttagtttagtttcctggtgaaaattgtagtacctttaccatcttac
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| CDS seq | atggaggcgacggtgctgagcgtgggcaagtcggtgcttggtggagcagttagctatgcccaatccgcgatcgcggaagagggagctttgaagctgggggtccagcgggaccaaagtttcatcagggatgagcttgagatgatgcagtctttcctgctggctgcagacaaagagcataatggacatcatcacgaggtcatcacgacctgggtgaagcaagtacgtgacgtggcctacgacgttgaagactgcctccaagactacgccgcccggttgaagaaaccaccctggtggagcctcccttgcacggtacaccgggagaggcgttgcatcgggaacgagatgaaggagctgagagccaaggttgaggatgtcagccagagaaacatgcgttaccatggtgtgtatgcagctgctccacagtcttcttcttccgttactgctgctgagctgctgcagtccaccaccactatcgacgactttgataaggctagacgtgccgccaagcaacgagaaaaggtggacctctcggagctcatcaccaacgacagacaaggtggacttagagtgattgttgtgtgggaaacaagaagtggacctgctgggacagtgcctgttgttcgagccgcctacgaaaagctcaaaggacagtttgaatgccacgcctgggtaaggctgatgcactcctttgatgcaaacgaattcatggggagcttggtgaggcagttcaaagcaaactctcacgagggtactggcaagacaccacaaggaacaccttctggggtgtctgttctgaatgagatggaagcacaaaattataatttgcttcatgactttactggatatgtgaccaacaagaaatacttggtcgtgcttaatggcctgtctacaatagaagagtgggactggataaaaacttatcttccaaacaatcataacgggagccgagtcctagtgtacacacagcaagctgaagttgcaagctgttgtaccgatgatccgtacaaggtgtctgagattcaacatgaagggtcatttgccaaacctctttatgtcttctacaaggaggtggtctctcagtcagttaattcagacctgcctgaaagcagttcacggcctttcctcaacagagattccaacactgcggctgtgaaggaactgactcgcagcgggacacagctcattggtagaggaaaagaaaaggatgatgtcatcaaactgctttctgattgtaatctgaaccatcaagtgatttcggtgtggggaatggttggcattgggaaaaccactctcgtcaaaagcatctatcagagctctgatcttgagaagcttaagtttgagaggcgtgcttgggtaactatatcacacccactcaaagaaactgagctgcttaggagtttagctcagtgtatagatgaagattcccctgaaaagaagggagaatctaagctacggcttgcaaggaatgatttaagcaagatggaactaaatatgttaaggggcaaggtgtcccaagacttagaagggaagaagtacctcattgttcttgatgacctattatctcttgttgagtgggattcgataataagaaacttgcctataaacaacaatggtagccggatcatactaactacaagatttcaagatgttgcgcaacgttgttccaagaaagaaatgtacatgtacaatatcaaaggtctaacagatgaagatgctcgtgagctattcttaactaaggtacgtatggatggtgatgaatccgaattgaaacctgacataatgaaggaagcagaaatcatcataaagaagtgtggccgacttccccttgcagtcgctacagtgggtggtttcttgtctaccagacctcgtaatatcatagaatggagggagtttggtgatcacatcagtgaagaatttgataacaacccaagtcttgagaagatgaagaaaatacttagatcaagctatgacggtttaacttaccacttgaaatcttgcttcttatatatgtcgattttccctagagaccatgacatcagatatagacgattattgaggcgatggactgcagagggttactcaagagcaacgagaaacaggagcaacgagaaagtggcagaagaacagttcaaagctcttctcaacaagagtatgatccaacaatcaaaaacaattgccagcgggaagacaggtttctgcaaagtctataatctcatgcatgaaatcatcatttcaaagtctgaagaagaaaaccttgttcttgttctagatgaccacatcaccccgcactctaaagataaagtacgccaccttgttgtgagcgagaactggagcagagaaaagaacgatatgcaaaatatagtggatgtgtcccacatacgatctctgacggtctttggagagtggagatcatttttcctttctaagaagatgaggatgcttcgggtgcttgatttagaagatgcagaaggtcttcgggattctgaccttgtgccaatcggaaagcttcgtcatttaaagtacttgtctctacgaggatctgaggaaatcttcaatcttccaagttcctttggtaacctgttgaacctggagacactagatatcaggggaacatgggttacgaagttgcctgcaaccattggtaggctacagaacttgaaatatctccatgctggcataccatcaggtgatgagaatgacgccagaatctatggtcagatgctaattatactactgcgtcagttcagatcaatccaaaaaaagacgggaaccaggttccttgtatcatttattatgttgctcatcactgcttggttgagaaacctggatgtttgtggtgttaaagtgccaagagggattggacagtggaggtccattgacacactgagcgtcgtgaacattgcacgggggaaggccatgctgaagaacctcaaaaagctcacccaattgcgcaagctaggtgtaacgggcatcaacaagagtaattgcaaagaactctgttccgccattgccgaccatggccgcttgcagtccatattactgcgagcggagggtaatgctgggttagaaggttgtttggatgacttgtcaccccctcctgaaaaccttgagagcctccaactgtatggcaatctggtgactttaccagaatggattaaggagcttaaaaatatacaaaagctgagccttcgcaacaccaatctgaaggcagatactaccatggaagtgcttggaaacctaccaatgctagccattcttcgtctccaggacaatgcgtgtgaggaggaagaactctgtttcggtcccgagcgtttcacaggtctgacgtcattggagcttctcaattgggagagcctcaagtcggtgaaatttgaaggaggagctactcctaaactgaaggtgctactggtggccaactgttggcaaataaacgatggtgggttttctggcatagaaactctctcgaccctaaaggaagtttcactcttgggctataattatgaccagacatacaccgaattcaaggaacaattacagaagcaacttggcatgaacaagaacaaaccaaatctaagtattctgtag
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| Protein seq | MEATVLSVGKSVLGGAVSYAQSAIAEEGALKLGVQRDQSFIRDELEMMQSFLLAADKEHNGHHHEVITTWVKQVRDVAYDVEDCLQDYAARLKKPPWWSLPCTVHRERRCIGNEMKELRAKVEDVSQRNMRYHGVYAAAPQSSSSVTAAELLQSTTTIDDFDKARRAAKQREKVDLSELITNDRQGGLRVIVVWETRSGPAGTVPVVRAAYEKLKGQFECHAWVRLMHSFDANEFMGSLVRQFKANSHEGTGKTPQGTPSGVSVLNEMEAQNYNLLHDFTGYVTNKKYLVVLNGLSTIEEWDWIKTYLPNNHNGSRVLVYTQQAEVASCCTDDPYKVSEIQHEGSFAKPLYVFYKEVVSQSVNSDLPESSSRPFLNRDSNTAAVKELTRSGTQLIGRGKEKDDVIKLLSDCNLNHQVISVWGMVGIGKTTLVKSIYQSSDLEKLKFERRAWVTISHPLKETELLRSLAQCIDEDSPEKKGESKLRLARNDLSKMELNMLRGKVSQDLEGKKYLIVLDDLLSLVEWDSIIRNLPINNNGSRIILTTRFQDVAQRCSKKEMYMYNIKGLTDEDARELFLTKVRMDGDESELKPDIMKEAEIIIKKCGRLPLAVATVGGFLSTRPRNIIEWREFGDHISEEFDNNPSLEKMKKILRSSYDGLTYHLKSCFLYMSIFPRDHDIRYRRLLRRWTAEGYSRATRNRSNEKVAEEQFKALLNKSMIQQSKTIASGKTGFCKVYNLMHEIIISKSEEENLVLVLDDHITPHSKDKVRHLVVSENWSREKNDMQNIVDVSHIRSLTVFGEWRSFFLSKKMRMLRVLDLEDAEGLRDSDLVPIGKLRHLKYLSLRGSEEIFNLPSSFGNLLNLETLDIRGTWVTKLPATIGRLQNLKYLHAGIPSGDENDARIYGQMLIILLRQFRSIQKKTGTRFLVSFIMLLITAWLRNLDVCGVKVPRGIGQWRSIDTLSVVNIARGKAMLKNLKKLTQLRKLGVTGINKSNCKELCSAIADHGRLQSILLRAEGNAGLEGCLDDLSPPPENLESLQLYGNLVTLPEWIKELKNIQKLSLRNTNLKADTTMEVLGNLPMLAILRLQDNACEEEELCFGPERFTGLTSLELLNWESLKSVKFEGGATPKLKVLLVANCWQINDGGFSGIETLSTLKEVSLLGYNYDQTYTEFKEQLQKQLGMNKNKPNLSIL |
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| Function | Disease resistance protein Piks-2 [UniProtKB/Swiss-Prot:P0DO10] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_08g0022820 | OsLima_08g0022820.01 | Chr08 | 27721720 | 27730657 | + | NAM | ||
| CDS seq | atggaggcgacggtgctgagcgtgggcaagtcggtgcttggtggagcagttagctatgcccaatccgcgatcgcggaagagggagctttgaagctgggggtccagcgggaccaaagtttcatcagggatgagcttgagatgatgcagtctttcctgctggctgcagacaaagagcataatggacatcatcacgaggtcatcacgacctgggtgaagcaagtacgtgacgtggcctacgacgttgaagactgcctccaagactacgccgcccggttgaagaaaccaccctggtggagcctcccttgcacggtacaccgggagaggcgttgcatcgggaacgagatgaaggagctgagagccaaggttgaggatgtcagccagagaaacatgcgttaccatggtgtgtatgcagctgctccacagtcttcttcttccgttactgctgctgagctgctgcagtccaccaccactatcgacgactttgataaggctagacgtgccgccaagcaacgagaaaaggtggacctctcggagctcatcaccaacgacagacaaggtggacttagagtgattgttgtgtgggaaacaagaagtggacctgctgggacagtgcctgttgttcgagccgcctacgaaaagctcaaaggacagtttgaatgccacgcctgggtaaggctgatgcactcctttgatgcaaacgaattcatggggagcttggtgaggcagttcaaagcaaactctcacgagggtactggcaagacaccacaaggaacaccttctggggtgtctgttctgaatgagatggaagcacaaaattataatttgcttcatgactttactggatatgtgaccaacaagaaatacttggtcgtgcttaatggcctgtctacaatagaagagtgggactggataaaaacttatcttccaaacaatcataacgggagccgagtcctagtgtacacacagcaagctgaagttgcaagctgttgtaccgatgatccgtacaaggtgtctgagattcaacatgaagggtcatttgccaaacctctttatgtcttctacaaggaggtggtctctcagtcagttaattcagacctgcctgaaagcagttcacggcctttcctcaacagagattccaacactgcggctgtgaaggaactgactcgcagcgggacacagctcattggtagaggaaaagaaaaggatgatgtcatcaaactgctttctgattgtaatctgaaccatcaagtgatttcggtgtggggaatggttggcattgggaaaaccactctcgtcaaaagcatctatcagagctctgatcttgagaagcttaagtttgagaggcgtgcttgggtaactatatcacacccactcaaagaaactgagctgcttaggagtttagctcagtgtatagatgaagattcccctgaaaagaagggagaatctaagctacggcttgcaaggaatgatttaagcaagatggaactaaatatgttaaggggcaaggtgtcccaagacttagaagggaagaagtacctcattgttcttgatgacctattatctcttgttgagtgggattcgataataagaaacttgcctataaacaacaatggtagccggatcatactaactacaagatttcaagatgttgcgcaacgttgttccaagaaagaaatgtacatgtacaatatcaaaggtctaacagatgaagatgctcgtgagctattcttaactaaggtacgtatggatggtgatgaatccgaattgaaacctgacataatgaaggaagcagaaatcatcataaagaagtgtggccgacttccccttgcagtcgctacagtgggtggtttcttgtctaccagacctcgtaatatcatagaatggagggagtttggtgatcacatcagtgaagaatttgataacaacccaagtcttgagaagatgaagaaaatacttagatcaagctatgacggtttaacttaccacttgaaatcttgcttcttatatatgtcgattttccctagagaccatgacatcagatatagacgattattgaggcgatggactgcagagggttactcaagagcaacgagaaacaggagcaacgagaaagtggcagaagaacagttcaaagctcttctcaacaagagtatgatccaacaatcaaaaacaattgccagcgggaagacaggtttctgcaaagtctataatctcatgcatgaaatcatcatttcaaagtctgaagaagaaaaccttgttcttgttctagatgaccacatcaccccgcactctaaagataaagtacgccaccttgttgtgagcgagaactggagcagagaaaagaacgatatgcaaaatatagtggatgtgtcccacatacgatctctgacggtctttggagagtggagatcatttttcctttctaagaagatgaggatgcttcgggtgcttgatttagaagatgcagaaggtcttcgggattctgaccttgtgccaatcggaaagcttcgtcatttaaagtacttgtctctacgaggatctgaggaaatcttcaatcttccaagttcctttggtaacctgttgaacctggagacactagatatcaggggaacatgggttacgaagttgcctgcaaccattggtaggctacagaacttgaaatatctccatgctggcataccatcaggtgatgagaatgacgccagaatctatggtcagatgctaattatactactgcgtcagttcagatcaatccaaaaaaagacgggaaccaggttccttgtatcatttattatgttgctcatcactgcttggttgagaaacctggatgtttgtggtgttaaagtgccaagagggattggacagtggaggtccattgacacactgagcgtcgtgaacattgcacgggggaaggccatgctgaagaacctcaaaaagctcacccaattgcgcaagctaggtgtaacgggcatcaacaagagtaattgcaaagaactctgttccgccattgccgaccatggccgcttgcagtccatattactgcgagcggagggtaatgctgggttagaaggttgtttggatgacttgtcaccccctcctgaaaaccttgagagcctccaactgtatggcaatctggtgactttaccagaatggattaaggagcttaaaaatatacaaaagctgagccttcgcaacaccaatctgaaggcagatactaccatggaagtgcttggaaacctaccaatgctagccattcttcgtctccaggacaatgcgtgtgaggaggaagaactctgtttcggtcccgagcgtttcacaggtctgacgtcattggagcttctcaattgggagagcctcaagtcggtgaaatttgaaggaggagctactcctaaactgaaggtgctactggtggccaactgttggcaaataaacgatggtgggttttctggcatagaaactctctcgaccctaaaggaagtttcactcttgggctataattatgaccagacatacaccgaattcaaggaacaattacagaagcaacttggcatgaacaagaacaaaccaaatctaagtattctgtag
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| Protein seq | MEATVLSVGKSVLGGAVSYAQSAIAEEGALKLGVQRDQSFIRDELEMMQSFLLAADKEHNGHHHEVITTWVKQVRDVAYDVEDCLQDYAARLKKPPWWSLPCTVHRERRCIGNEMKELRAKVEDVSQRNMRYHGVYAAAPQSSSSVTAAELLQSTTTIDDFDKARRAAKQREKVDLSELITNDRQGGLRVIVVWETRSGPAGTVPVVRAAYEKLKGQFECHAWVRLMHSFDANEFMGSLVRQFKANSHEGTGKTPQGTPSGVSVLNEMEAQNYNLLHDFTGYVTNKKYLVVLNGLSTIEEWDWIKTYLPNNHNGSRVLVYTQQAEVASCCTDDPYKVSEIQHEGSFAKPLYVFYKEVVSQSVNSDLPESSSRPFLNRDSNTAAVKELTRSGTQLIGRGKEKDDVIKLLSDCNLNHQVISVWGMVGIGKTTLVKSIYQSSDLEKLKFERRAWVTISHPLKETELLRSLAQCIDEDSPEKKGESKLRLARNDLSKMELNMLRGKVSQDLEGKKYLIVLDDLLSLVEWDSIIRNLPINNNGSRIILTTRFQDVAQRCSKKEMYMYNIKGLTDEDARELFLTKVRMDGDESELKPDIMKEAEIIIKKCGRLPLAVATVGGFLSTRPRNIIEWREFGDHISEEFDNNPSLEKMKKILRSSYDGLTYHLKSCFLYMSIFPRDHDIRYRRLLRRWTAEGYSRATRNRSNEKVAEEQFKALLNKSMIQQSKTIASGKTGFCKVYNLMHEIIISKSEEENLVLVLDDHITPHSKDKVRHLVVSENWSREKNDMQNIVDVSHIRSLTVFGEWRSFFLSKKMRMLRVLDLEDAEGLRDSDLVPIGKLRHLKYLSLRGSEEIFNLPSSFGNLLNLETLDIRGTWVTKLPATIGRLQNLKYLHAGIPSGDENDARIYGQMLIILLRQFRSIQKKTGTRFLVSFIMLLITAWLRNLDVCGVKVPRGIGQWRSIDTLSVVNIARGKAMLKNLKKLTQLRKLGVTGINKSNCKELCSAIADHGRLQSILLRAEGNAGLEGCLDDLSPPPENLESLQLYGNLVTLPEWIKELKNIQKLSLRNTNLKADTTMEVLGNLPMLAILRLQDNACEEEELCFGPERFTGLTSLELLNWESLKSVKFEGGATPKLKVLLVANCWQINDGGFSGIETLSTLKEVSLLGYNYDQTYTEFKEQLQKQLGMNKNKPNLSIL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.170549 | 0.000000 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0539700 | RBH | 0.369842 | 0.0 | 1.213805 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g42700 | RBH | 0.040847 | 0.0 | 0.160217 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0539700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0023830 | RBH | 1.201316 | 1.974522 | 2.732878 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0023640 | RBH | 0.000000 | 0.269728 | 0.957065 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0023620 | RBH | 0.279464 | 0.0 | 3.208556 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0023970 | RBH | 0.053660 | 0.029589 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0023630 | RBH | 2.048370 | 0.000000 | 2.192557 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0428700 | RBH | 0.885481 | 0.674415 | 0.5005805 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0023480 | RBH | 4.683669 | 0.080726 | 3.291930 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0448800 | RBH | 3.2104165 | 1.428197 | 5.3098605 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0016710 | RBH | 0.020002 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0023220 | RBH | 0.000000 | 1.480899 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0023040 | RBH | 10.247912 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0023870 | RBH | 0.496507 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0023120 | RBH | 2.530851 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G023310 | SBH | 7.032104 | 0.606513 | 1.433877 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0023450 | RBH | 1.838243 | 0.0 | 0.790160 |
