Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_08g0020710 | OGI:08072730 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr08:26098833-26102875 | ||||||||
| Gene Symbol | WFP, OsSPL14, SPL14, IPA1, WFP/IPA1, OsSPL14/WFP/IPA1, OsIPA1, IPA1/OsSPL14 | ||||||||||
| DNA seq | acagcattaacactgatacttaaaaattcatggagagttacatagatggatgcggcacagcaattaattgagttcaagggcgcgcattattattcatcacagggagattaatcgccagtcaccttagaatttcctttccatactggaaaggaaaatttgaacacaaaataagggcaggcagcatgaggttcttcagttccatgactcgccttgcgggacgacagatcgatggcagctggaacagcctctacagagaccaatccatcgtgttgctggtttggtcgaaggtgctgccggacccaggatcgatgcgtggtgctggggctggaccgttcccctgcagagcaagctcaagctcaccggagaagtgggcatgatggctaggaccagggtgcacctcatcaagtgagacttcatgtggtagctggtgcgccacgctccgaccaccaccctcatggccccgagaacctgtccaggggcttggtgccatgtagctacccgccatggcggagggtgccacaggattgccatcaaagctggtggtagtggacatggctgcagcctggttgtggctggcagcggcactgtgggtagtagtatcccatggctgggttgacagaagagagagagcacagctcgagtcggtggcggcaccgacccctgcgagacatccacctggagggagatttgggccagcgaacaccggtggccctgaagaagagctaccttggccgctgtatgtgttggcaccatatcccgccactgcactagagtgaccatgaggagctacgttcctgtgccactggataccaccggagatccgatcgcctggttgaattgctggccatgcattccttacgctgcttggaacccttgggtaggagaaatccaacgtaaagcttctgaacctgcgatgctcttctggatcaagaatcgcaacaaacaacacatcagcgaatgcaaccagtagttaccaacaaacacacaagatgcaaagaaaacaagagcctctgatgataccaccaacagatgcagctagtcgaccgtagcgtgatgccaaaggggtttgcggcctcctccggcgctcattatgacctgcaaggcgtctgcggcagctgcgttttccttggtcaaattcaggcagcaggtggaacctgtcatattatgtgaacagagaatcatggatagattgattctgaatcctatccactgctgctgtgcagtgactgagtttttgaagcaacagaaggtacatcatctaaatttggctgttgactcagaaagcaaaacgaggcatggcgagcaaattactcctacatgaatcaaggtaaaacaagcaatgcacaatgcaagcaacttttatatgcttattatcctaatagatctgcatgatgcaagccaaacatagcaaaccgtagctcaggtcaaaaggcagcccatgctaactcagaacaagatttcttgtcatcctaaagatggtattactacaaatcccatcaagataaagcagcaactctcctagtgcctttcataattacacccataaataaaaaatgctattcctaacacaacaaaaggacaccatgtgaaaggaagactgtaatcattcatggagttgtgagatgtcgggcttaaaataacagtacacaaacactagatggttatccatctaattggacggcaggtgtcctacacataaaagctaatggtccatctggcttttataatgatgcattatggcatcagatagtgacacacttagcactggcacagctcaattataaaatcttgacatttttatgaatactcattgttagtaatttgaccataaaggaaatgatagtagcttcaacgtaaccaaaagtctgaaccaagtctctaacaacaattactacctccgtcctaaataaagctacaacaatcataaaatcttgacatttttatgaattctcatttgtagtaatttggcccgtaaaggaaatgatagtagcctcaacataaccaaaagtctgaaccaagtctctaacaacagttattacttccgtcctaaataaagctatttctagctatgaatttggacaggtacattttggaacagatatattagtacgaagacactagatatataaggcaacagaaattgttggtttgctctgaaaaggggggaactggtatgaagtaagtacaaggcaaagatatttgtgggctagtgctacaaatatggaatgtagaaatactactacatattctctagtatgtttctcttacttcccttcatccttaagggcccctttgaaacgcaggataggaaaaacataggaataggaaaaacgtaggaattgaagttgtatgtttttccaatcctacaggaattgaaaacacatgaaatggagagaagagccctttgattataccacaagatacactcaacaaaggaaagtttcacaagaggtctaacctcttgcttattttcctatggaattgatcataggaatgcaatcctacggaagttttcctatcctctttctatgaatcaaagggctctataggaaaaaatccttaggaaaatgaatcctccaaaattcctttgctaatcctccatttcaaaggggccctaagtgttgctagtaaaaaattaaagcatcaaacagtccaagctatccatagactattacaagaggggcagatatcaaaacaggcatatgcttgtcagctaatgagacaaactattaaataaaagtaacaaatgcacagaagtggtagtatagattatgaacaactggcgaggcgttggaacttggactatgctaccatatgctaccatacagaagtggtagtatgctcagtagtagtaaggatctatagataactgaaaaccttgagctcaagtcacagcatagtaggagttgcatatcttgcaacacaaagacacatatatagtacaaactacaaagcaacagctttagccaacttctctctcccattcttaccgtggccattgctaagcttgcaacatcaacggaattttatagctaatggctaattaactaagtagagtaagcaccagtacaaataaacagtggctcttactaacacagaggaatcttatgcaaagcggcaggcaggcaggcagacaggcaagtcacatcactcaaccatataaaggagtattttcctcatcaacctaccaacttaaaaatctcataagcaccagtcaaaatattaacactactagtgtagtactcccaacacaatcaaagataaaaatagatgaaatgcaggaagtttcagagagttgaaatcagcttgttttagcaggaaaggtcccacacacaccacttgacagtgcatctaatgtggtggccgtgctcataaaccttaaaaacctatagtaaaacgagtagtaacaacaacacaataacccaaaagacaaaacggcacaacaataacaacacatgtactagcactaaacaagaacaagaagcaaataaacaagagagataggtgaaagaggagggagagcaagcaaagcaaagcaaaagcagtggtgacatcagcaatggcgaggtgagtgagagagtgacctgctgcactgctggcagaagcgctgctcgaggccggcgacgacgacgcggggagccttggaatgcatgaagcacaccttgtggcggcagtagtagttcttgatcccgctcagatccgcgccgcacccctccacctggcaccgcggcggcggcggcggcggcggtggcgccgccgcggccacgcccttccccttgttcttgccccctccgccgcgtccaccacccgccgccttggaagacgaggacggcggcgcggcgctcgcgctgccactgccactgccagtgccgccgccgcctgctgccgcggcggcgtcctcgaagtagatcttcttgccgaacttgagaccgtgcagctggcggtgctcgtcccctccaccaccaccgccgccgctgccgcctactccgccgccggcggcggcggcggcgcctcctccactggccatctccattgctcgcggt
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| CDS seq | atggagatggccagtggaggaggcgccgccgccgccgccggcggcggagtaggcggcagcggcggcggtggtggtggaggggacgagcaccgccagctgcacggtctcaagttcggcaagaagatctacttcgaggacgccgccgcggcagcaggcggcggcggcactggcagtggcagtggcagcgcgagcgccgcgccgccgtcctcgtcttccaaggcggcgggtggtggacgcggcggagggggcaagaacaaggggaagggcgtggccgcggcggcgccaccgccgccgccgccgccgccgcggtgccaggtggaggggtgcggcgcggatctgagcgggatcaagaactactactgccgccacaaggtgtgcttcatgcattccaaggctccccgcgtcgtcgtcgccggcctcgagcagcgcttctgccagcagtgcagcaggttccacctgctgcctgaatttgaccaaggaaaacgcagctgccgcagacgccttgcaggtcataatgagcgccggaggaggccgcaaacccctttggcatcacgctacggtcgactagctgcatctgttggtgaagagcatcgcaggttcagaagctttacgttggatttctcctacccaagggttccaagcagcgtaaggaatgcatggccagcaattcaaccaggcgatcggatctccggtggtatccagtggcacaggaacgtagctcctcatggtcactctagtgcagtggcgggatatggtgccaacacatacagcggccaaggtagctcttcttcagggccaccggtgttcgctggcccaaatctccctccaggtggatgtctcgcaggggtcggtgccgccaccgactcgagctgtgctctctctcttctgtcaacccagccatgggatactactacccacagtgccgctgccagccacaaccaggctgcagccatgtccactaccaccagctttgatggcaatcctgtggcaccctccgccatggcgggtagctacatggcaccaagcccctggacaggttctcggggccatgagggtggtggtcggagcgtggcgcaccagctaccacatgaagtctcacttgatgaggtgcaccctggtcctagccatcatgcccacttctccggtgagcttgagcttgctctgcaggggaacggtccagccccagcaccacgcatcgatcctgggtccggcagcaccttcgaccaaaccagcaacacgatggattggtctctgtag
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| Protein seq | MEMASGGGAAAAAGGGVGGSGGGGGGGDEHRQLHGLKFGKKIYFEDAAAAAGGGGTGSGSGSASAAPPSSSSKAAGGGRGGGGKNKGKGVAAAAPPPPPPPPRCQVEGCGADLSGIKNYYCRHKVCFMHSKAPRVVVAGLEQRFCQQCSRFHLLPEFDQGKRSCRRRLAGHNERRRRPQTPLASRYGRLAASVGEEHRRFRSFTLDFSYPRVPSSVRNAWPAIQPGDRISGGIQWHRNVAPHGHSSAVAGYGANTYSGQGSSSSGPPVFAGPNLPPGGCLAGVGAATDSSCALSLLSTQPWDTTTHSAAASHNQAAAMSTTTSFDGNPVAPSAMAGSYMAPSPWTGSRGHEGGGRSVAHQLPHEVSLDEVHPGPSHHAHFSGELELALQGNGPAPAPRIDPGSGSTFDQTSNTMDWSL |
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| Function | Squamosa promoter-binding-like protein 14 [UniProtKB/Swiss-Prot:Q7EXZ2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_08g0020710 | OsLima_08g0020710.01 | Chr08 | 26098833 | 26102875 | - | NAM | ||
| CDS seq | atggagatggccagtggaggaggcgccgccgccgccgccggcggcggagtaggcggcagcggcggcggtggtggtggaggggacgagcaccgccagctgcacggtctcaagttcggcaagaagatctacttcgaggacgccgccgcggcagcaggcggcggcggcactggcagtggcagtggcagcgcgagcgccgcgccgccgtcctcgtcttccaaggcggcgggtggtggacgcggcggagggggcaagaacaaggggaagggcgtggccgcggcggcgccaccgccgccgccgccgccgccgcggtgccaggtggaggggtgcggcgcggatctgagcgggatcaagaactactactgccgccacaaggtgtgcttcatgcattccaaggctccccgcgtcgtcgtcgccggcctcgagcagcgcttctgccagcagtgcagcaggttccacctgctgcctgaatttgaccaaggaaaacgcagctgccgcagacgccttgcaggtcataatgagcgccggaggaggccgcaaacccctttggcatcacgctacggtcgactagctgcatctgttggtgaagagcatcgcaggttcagaagctttacgttggatttctcctacccaagggttccaagcagcgtaaggaatgcatggccagcaattcaaccaggcgatcggatctccggtggtatccagtggcacaggaacgtagctcctcatggtcactctagtgcagtggcgggatatggtgccaacacatacagcggccaaggtagctcttcttcagggccaccggtgttcgctggcccaaatctccctccaggtggatgtctcgcaggggtcggtgccgccaccgactcgagctgtgctctctctcttctgtcaacccagccatgggatactactacccacagtgccgctgccagccacaaccaggctgcagccatgtccactaccaccagctttgatggcaatcctgtggcaccctccgccatggcgggtagctacatggcaccaagcccctggacaggttctcggggccatgagggtggtggtcggagcgtggcgcaccagctaccacatgaagtctcacttgatgaggtgcaccctggtcctagccatcatgcccacttctccggtgagcttgagcttgctctgcaggggaacggtccagccccagcaccacgcatcgatcctgggtccggcagcaccttcgaccaaaccagcaacacgatggattggtctctgtag
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| Protein seq | MEMASGGGAAAAAGGGVGGSGGGGGGGDEHRQLHGLKFGKKIYFEDAAAAAGGGGTGSGSGSASAAPPSSSSKAAGGGRGGGGKNKGKGVAAAAPPPPPPPPRCQVEGCGADLSGIKNYYCRHKVCFMHSKAPRVVVAGLEQRFCQQCSRFHLLPEFDQGKRSCRRRLAGHNERRRRPQTPLASRYGRLAASVGEEHRRFRSFTLDFSYPRVPSSVRNAWPAIQPGDRISGGIQWHRNVAPHGHSSAVAGYGANTYSGQGSSSSGPPVFAGPNLPPGGCLAGVGAATDSSCALSLLSTQPWDTTTHSAAASHNQAAAMSTTTSFDGNPVAPSAMAGSYMAPSPWTGSRGHEGGGRSVAHQLPHEVSLDEVHPGPSHHAHFSGELELALQGNGPAPAPRIDPGSGSTFDQTSNTMDWSL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.052026 | 0.153942 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0509600 | RBH | 0.280971 | 0.692782 | 1.373931 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g39890 | RBH | 0.179820 | 0.515825 | 0.352174 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0509600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0021670 | RBH | 0.000000 | 4.653267 | 0.987751 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0021560 | RBH | 0.000000 | 0.000000 | 0.269399 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0021440 | RBH | 0.400354 | 2.360682 | 1.020900 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0021630 | RBH | 0.0 | 0.156913 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0021490 | RBH | 1.962914 | 0.0 | 0.437820 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0403700 | RBH | 0.5524305 | 1.0822865 | 33.9918325 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0021370 | RBH | 0.0 | 0.054263 | 0.298014 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0423300 | RBH | 1.792652 | 4.865218 | 38.057335 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0014880 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0021010 | RBH | 0.240952 | 3.290131 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0020830 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0021680 | RBH | 0.192391 | 0.411980 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0021040 | RBH | 0.135685 | 3.370136 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G021180 | RBH | 0.0 | 1.800767 | 0.482812 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0021360 | RBH | 0.0 | 5.180932 | 1.587851 |
