Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_07g0027720 | OGI:07079180 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr07:30051028-30052896 | ||||||||
| Gene Symbol | NAC15, ONAC015, ONAC15, ONAC069, ONAC69 | ||||||||||
| DNA seq | gatggatgcaaatctcggtttggttaatcgatcaatggttgaattgatcatgtaagtaaagcacaactgatggtacatgtacaaggggtttagttaatttactccttccatccacacacacacatacacagaaagaggccacatggcctatcacacacaaggcaatatataatctgcagattaatcaaccaaccgagaccttaattttgatgagatatctctctctagctagctcatcactcccctaatcaccaaactagctagctagctagtaatctctatgtattatccccaatcagataactatatacatacagaattaagacaaacaaacctatataactaatttgattaagctaattaatgaattagtccgctccatctgctctgcacaccttgatcagaccagatcagcgcgacctaatctctctctctctctcgcatcaccacagactccatcatcatcatctcctagttaacccaaacctttgacagtaatcaagttaataaaccaactaattaaacaggattaatctgatcgatcatatggcaaattaaccacgaaattaatctggtcaggccttccatatgtaggagtagtccgtgatggagtccgggaaggagagcagctcgtccaccaccggatccacgtcagcgtcggcgccggagaagcacgccgtcgacgcctccgccttgcagaacctccgaatcgcctggtccgccatggcgccggagctgtggttataattggtcgctgacgccgggagggagaagtagccgtagtggttgtgcatcaggttggccggcggaggtggctccgtcttgagcgtggaggtggaggcgaaggggtcgtcgatgagcggcggcaggtcggcgtcgaggtggaggaagtcgtcgaggtcgaggtcgaaggagtcgttgcgcgggaagggaggcggcggcatttgggcaatctttgccgccaagtctttgttgaacacccggcaaaccgcccattcctcctgcgcgcacgcaaccatatactagtattcaataaaagagaaagaggaacgacgcgacatgtgagctagccatcgccatggccggcggcgagtagagagtacctttgcggagcgggggaggttggggggaagcttgccgtcgaggcggtattcgtgcatgacccagggggtcttctcgccgcggggggcgcggcccatgtagaagacgagcgtcttcttcatgccgacgaggaggccgcggccgcggaagatctccttgtccttcccggtggccttccagtacccgctggccgtcgcccggttcgtcctcatccccgtcgggtacttgcggtccttgtggcagaagaagaaccactccttctcccccatcttcgccttgcctgcaatacatgcatgcagctccatcgtcgaatcggatcgaatagctagcagacgatgaggaagctaggccgccatgaacgagagactactacttacttgggaggtcccatggctcgcagttgttgaggttcacgtcggcgatgacgacgcaggagaagctccggtcctgggccttgcgggtgaggtagtgggtcaccacctcctcgtcggtggggtggaaccggaaccccggcggcagctccagccgagtctcctcctcctccagctggttgatcaccgacacctccgactccgacatggctcctgctctctccccagacgcctagctagctagctgatgattctcagctctctgttctgagctagctcaggtcagaaatggaggagaagaagctagtactagtagtagacgagagagacgatcgagattgatcgaggtgtgaatgaaatagcttagctaggtagggatcgagatgggtttaggaag
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| CDS seq | atgtcggagtcggaggtgtcggtgatcaaccagctggaggaggaggagactcggctggagctgccgccggggttccggttccaccccaccgacgaggaggtggtgacccactacctcacccgcaaggcccaggaccggagcttctcctgcgtcgtcatcgccgacgtgaacctcaacaactgcgagccatgggacctcccaagcaaggcgaagatgggggagaaggagtggttcttcttctgccacaaggaccgcaagtacccgacggggatgaggacgaaccgggcgacggccagcgggtactggaaggccaccgggaaggacaaggagatcttccgcggccgcggcctcctcgtcggcatgaagaagacgctcgtcttctacatgggccgcgccccccgcggcgagaagaccccctgggtcatgcacgaataccgcctcgacggcaagcttccccccaacctcccccgctccgcaaaggaggaatgggcggtttgccgggtgttcaacaaagacttggcggcaaagattgcccaaatgccgccgcctcccttcccgcgcaacgactccttcgacctcgacctcgacgacttcctccacctcgacgccgacctgccgccgctcatcgacgaccccttcgcctccacctccacgctcaagacggagccacctccgccggccaacctgatgcacaaccactacggctacttctccctcccggcgtcagcgaccaattataaccacagctccggcgccatggcggaccaggcgattcggaggttctgcaaggcggaggcgtcgacggcgtgcttctccggcgccgacgctgacgtggatccggtggtggacgagctgctctccttcccggactccatcacggactactcctacatatggaaggcctga
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| Protein seq | MSESEVSVINQLEEEETRLELPPGFRFHPTDEEVVTHYLTRKAQDRSFSCVVIADVNLNNCEPWDLPSKAKMGEKEWFFFCHKDRKYPTGMRTNRATASGYWKATGKDKEIFRGRGLLVGMKKTLVFYMGRAPRGEKTPWVMHEYRLDGKLPPNLPRSAKEEWAVCRVFNKDLAAKIAQMPPPPFPRNDSFDLDLDDFLHLDADLPPLIDDPFASTSTLKTEPPPPANLMHNHYGYFSLPASATNYNHSSGAMADQAIRRFCKAEASTACFSGADADVDPVVDELLSFPDSITDYSYIWKA |
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| Function | NAC domain-containing protein 87 [UniProtKB/Swiss-Prot:Q9FK44] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_07g0027720 | OsLima_07g0027720.01 | Chr07 | 30051028 | 30052896 | - | NAM | ||
| CDS seq | atgtcggagtcggaggtgtcggtgatcaaccagctggaggaggaggagactcggctggagctgccgccggggttccggttccaccccaccgacgaggaggtggtgacccactacctcacccgcaaggcccaggaccggagcttctcctgcgtcgtcatcgccgacgtgaacctcaacaactgcgagccatgggacctcccaagcaaggcgaagatgggggagaaggagtggttcttcttctgccacaaggaccgcaagtacccgacggggatgaggacgaaccgggcgacggccagcgggtactggaaggccaccgggaaggacaaggagatcttccgcggccgcggcctcctcgtcggcatgaagaagacgctcgtcttctacatgggccgcgccccccgcggcgagaagaccccctgggtcatgcacgaataccgcctcgacggcaagcttccccccaacctcccccgctccgcaaaggaggaatgggcggtttgccgggtgttcaacaaagacttggcggcaaagattgcccaaatgccgccgcctcccttcccgcgcaacgactccttcgacctcgacctcgacgacttcctccacctcgacgccgacctgccgccgctcatcgacgaccccttcgcctccacctccacgctcaagacggagccacctccgccggccaacctgatgcacaaccactacggctacttctccctcccggcgtcagcgaccaattataaccacagctccggcgccatggcggaccaggcgattcggaggttctgcaaggcggaggcgtcgacggcgtgcttctccggcgccgacgctgacgtggatccggtggtggacgagctgctctccttcccggactccatcacggactactcctacatatggaaggcctga
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| Protein seq | MSESEVSVINQLEEEETRLELPPGFRFHPTDEEVVTHYLTRKAQDRSFSCVVIADVNLNNCEPWDLPSKAKMGEKEWFFFCHKDRKYPTGMRTNRATASGYWKATGKDKEIFRGRGLLVGMKKTLVFYMGRAPRGEKTPWVMHEYRLDGKLPPNLPRSAKEEWAVCRVFNKDLAAKIAQMPPPPFPRNDSFDLDLDDFLHLDADLPPLIDDPFASTSTLKTEPPPPANLMHNHYGYFSLPASATNYNHSSGAMADQAIRRFCKAEASTACFSGADADVDPVVDELLSFPDSITDYSYIWKA
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.545188 | 0.779252 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0684800 | RBH | 1.264225 | 1.827157 | 1.065687 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g48550 | RBH | 0.812171 | 1.211949 | 0.270541 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0684800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0028060 | RBH | 2.006288 | 42.205364 | 6.104427 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0028110 | RBH | 0.190174 | 6.447619 | 0.189686 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0027900 | RBH | 0.761107 | 17.610842 | 3.987221 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0027690 | RBH | 0.043299 | 0.373799 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0028000 | RBH | 2.539322 | 8.306880 | 7.522515 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0472600 | RBH | 4.3897675 | 6.918473 | 53.457779 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0028430 | RBH | 0.241705 | 2.626923 | 0.298957 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0486500 | RBH | 12.218712 | 13.97122 | 0.1925185 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0016070 | RBH | 0.109000 | 0.183853 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0028170 | RBH | 1.093956 | 7.603823 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0027890 | RBH | 12.984952 | 26.626450 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0028220 | RBH | 2.317402 | 3.551203 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0027780 | RBH | 1.097938 | 7.524999 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G027850 | RBH | 1.585500 | 0.533872 | 1.170908 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0027600 | RBH | 3.078254 | 35.380409 | 1.116539 |
