Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_07g0022940 | OGI:07070370 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr07:26351611-26351862 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atggaaagcagatacggcccaaccacatccttaaaccccaggagtttggcgtcgcctctcgctctcggccatcgcctctcgctcttccccgcctccccgccgccgccgccgccgtggatccctccgcccaccgccggcgagcccttccgccgccgcctcaccctagcgctgctcccgtgggacggactgcggtccgccacttcctcggcgtgctcctcctccagctcacctcagtgtcgtccctcccggtaa |
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| CDS seq | atggaaagcagatacggcccaaccacatccttaaaccccaggagtttggcgtcgcctctcgctctcggccatcgcctctcgctcttccccgcctccccgccgccgccgccgccgtggatccctccgcccaccgccggcgagcccttccgccgccgcctcaccctagcgctgctcccgtgggacggactgcggtccgccacttcctcggcgtgctcctcctccagctcacctcagtgtcgtccctcccggtaa |
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| Protein seq | MESRYGPTTSLNPRSLASPLALGHRLSLFPASPPPPPPWIPPPTAGEPFRRRLTLALLPWDGLRSATSSACSSSSSPQCRPSR |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_07g0022940 | OsLima_07g0022940.01 | Chr07 | 26351611 | 26351862 | + | NAM | ||
| CDS seq | atggaaagcagatacggcccaaccacatccttaaaccccaggagtttggcgtcgcctctcgctctcggccatcgcctctcgctcttccccgcctccccgccgccgccgccgccgtggatccctccgcccaccgccggcgagcccttccgccgccgcctcaccctagcgctgctcccgtgggacggactgcggtccgccacttcctcggcgtgctcctcctccagctcacctcagtgtcgtccctcccggtaa
More
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| Protein seq | MESRYGPTTSLNPRSLASPLALGHRLSLFPASPPPPPPWIPPPTAGEPFRRRLTLALLPWDGLRSATSSACSSSSSPQCRPSR |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0023140 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0415300 | RBH | 1.623367 | 3.2024325 | 0.6074655 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0023630 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0425600 | RBH | 1.509966 | 4.067374 | 6.3668495 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0023080 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0022960 | RBH | 9.224324 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0023170 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G022890 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0022910 | RBH | 0.0 | 0.0 | 0.0 |
