Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_07g0017920 | OGI:07058990 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr07:22251304-22254842 | ||||||||
| Gene Symbol | CRK10 | ||||||||||
| DNA seq | agaaagaatcaatatgtcaattctttcaaaagaaaaaccattgtatcaagcatgtgtcttatttgctacagtatcagtgtgcaacagtacaaacatgacttccgttgatttaaacaggctgataacaggagatattattaagctctaacaatttcaaattgattttattgagccaaaaactcggtacctagctagcgcagcttaataagagtttgttgtacaattcccggtaaatgcaaggaagaggaggccgaggttctttcaattctcatcctacaatactcatctgggctcaagttctgtgatcggcgcttcattttgcgacatttttcttgagttgtgtgggttctgctctgaatttgcaccttagctagcagtagcaccaatctcctggacccaaaatgaaggcctggacaagcatgggagacggactgtaccagtactactaagcatggcattaacagctgacatcaatggcctatcagcaggtttcggttgaacacagagtagcccaatgtggatgcacttcagcaccttatcaactggatagtggtttcccaatgatggatcgatcaactcgatggctttatcgctagtccagtgctcccatgtctgcatcaaatcaatgggttagtgttcgatttaagttataattgggagaagaagttagctcggtatagaataattgggtccatgtactcacaacatatatgagatcaaccacatggtcagaaccgtaggagccaaagtttcttcttcctgtgatgatctctaaaaccaggacaccgaaactatacacgtctaacttcattgaatattgtccgcgcatcgcatactctggagacatgtatccactgtagcaagaacataacttttactgcatgatctattgacttcattattttaaaggattggccatacttactaagtcccagcgatacggtgagtgataacttgtgattgatccctttcgaatatcttagctagaccaaagtcagaaatcttaggattataagcagaatccaagagaacattgcttgctttgaggtcacgatgaactatcttcagttgagaatcttcgtgaagatattgcaatcctctagctatgccatttatgatcttgaacctctggccccaatcaagctctttgattctctctgcatctgccactcaagcaagaaaacaccaattatgacatgtaggtatgagttaggcgtatttgcactatcatcatgaaatttaatttctttttgggaaacagggagatgagagaaatagtaccaaaaagaatggtatcgaggcttctattgggcatatattcatatgcaagtattttctcattttcttctaagcaaacgccaataagcctgacaagattgttgtggttcagcttagcaaccaaaagtagttcagttttcagctcttcaattccttgtctggaagtctgtgcgagccttttcaccgctatttcctgaccttctggtagatctccctgcggcaggtgaaaaaagaagttgcggcctcatcatatattgagagagaaaacccacactgttacacatggtgtgagtggtaccttgtaaactacaccgaagccaccttcaccaagccttttgtgttcagaaaagttatctgtagcagttcgtagtgtttgtagatcaagaacgagtgaagcaaaactctgcatctcatcttcgctagactctattggaagagagaagtaaataattaattacgcagtatatgactaacagatggaaagagtccttgtaccccctccattttatgttataagattaagatgctttgatcttttctaacaaaaatttatagtggtttatagaataatttaacaatatccacgatatcaaattagtctaattaaatcaaacgttgactatattttgctaatttgtttgatataaatttggttaagcttaaataggtttgactagaaaaaaaattagaacgtaaggatggaagtactatcttaattaatgacactaatatgactaaaagtctttctactaactttggagctaccaggagatttcgccgaactataacttgggatgttgattgatgccttgtccaaatatttggtagctccaagttataattttattgtgcggacaattgagaagtaccatatatagagaagatctatagactaaatataagcatctttgaaaagtggtccaacacggcaactagaaataactgccttcaatattagatactgatttttttttttgtgtgagaaagagagaatggaatttgattaaacgaaatttctaatgaatcacttgaattgagccaacttttcataaaaataacaagacaggttcattaattagtttccgtgatattccattctaacaaaatggataagatgaatttacttggtcgtaatgtttttcttgctagtctccgcctcctccaactcgtcgaacagaaccatgctgcaatagtagctaatactagagcaattgtaggcattgaaatggctagtattgcacttctcttgtttttcgatctttctgcaaatataatttaaccagccttataagttatcgaagaaaacacactttgcacacaggaaaatatcaggcaagtgataaataaaagaaaaggagaaaaaaagtatgtccaacatacctccggctgcggtcaccggtggcgccggtgaaggcgacggccccgggagttgcaacagagagcggccagagaagaaagggtatacctcaaaccataagttgcatcgcacgcccaaaactcgccctcccatcctcccaatcaaattcccagataccatcctcccaactatatcctcgaggcagctccggcaagcagtcgccgccatgtctggcgtgcactgcgccagcgagtagatcttgggaaaagttgtctcgtcgaacgcctcctcccccgtgccgaaccgcctgacggagtccgttgctgcgtagtcggcggtggtgttgatgagtcggacgacggcggcctcaaaagccggagccactgccgcgctgacattttgggctttccaagcaacgaccatcccttggctattggaggtagggctgatcgggaaggcgtcgttggcgaagcggaggatgcaggtgtcgtcgtagacgattacggtcttgacgagcgggcagagttcctgggcgctctgaatggccgcggcaacgcaggtagcgcaggaggaagagttggtatcgccacgacagagcgcgagggcgtagatggcatcgggaactgtgcccgaggagccggaggcgaagagggagggggaggaggaggcgtacgatggcagggaggtggctaagtactgtatgtttgcgtgatacgtgccgtgctccgtgtagttgccgctgtcaccacacaaaggcaccagcgtctgcgcatcggtgaggggcgcgtggagcagcagcaaggcgaggccggcggctgcggcggcgaggtagtagcaggccatggacatgatggtttgtgactgaggaagagatcagaaggggccggatacgtacggagacgcc
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| CDS seq | atgtccatggcctgctactacctcgccgccgcagccgccggcctcgccttgctgctgctccacgcgcccctcaccgatgcgcagacgctggtgcctttgtgtggtgacagcggcaactacacggagcacggcacgtatcacgcaaacatacagtacttagccacctccctgccatcgtacgcctcctcctccccctccctcttcgcctccggctcctcgggcacagttcccgatgccatctacgccctcgcgctctgtcgtggcgataccaactcttcctcctgcgctacctgcgttgccgcggccattcagagcgcccaggaactctgcccgctcgtcaagaccgtaatcgtctacgacgacacctgcatcctccgcttcgccaacgacgccttcccgatcagccctacctccaatagccaagggatggtcgttgcttggaaagcccaaaatgtcagcgcggcagtggctccggcttttgaggccgccgtcgtccgactcatcaacaccaccgccgactacgcagcaacggactccgtcaggcggttcggcacgggggaggaggcgttcgacgagacaacttttcccaagatctactcgctggcgcagtgcacgccagacatggcggcgactgcttgccggagctgcctcgaggatatagttgggaggatggtatctgggaatttgattgggaggatgggagggcgagttttgggcgtgcgatgcaacttatggtttgaggtataccctttcttctctggccgctctctgttgcaactcccggggccgtcgccttcaccggcgccaccggtgaccgcagccggagaaagatcgaaaaacaagagaagtgcaatactagccatttcaatgcctacaattgctctagtattagctactattgcagcatggttctgttcgacgagttggaggaggcggagactagcaagaaaaacattacgaccaaatgcagagagaatcaaagagcttgattggggccagaggttcaagatcataaatggcatagctagaggattgcaatatcttcacgaagattctcaactgaagatagttcatcgtgacctcaaagcaagcaatgttctcttggattctgcttataatcctaagatttctgactttggtctagctaagatattcgaaagggatcaatcacaagttatcactcaccgtatcgctgggacttatggatacatgtctccagagtatgcgatgcgcggacaatattcaatgaagttagacgtgtatagtttcggtgtcctggttttagagatcatcacaggaagaagaaactttggctcctacggttctgaccatgtggttgatctcatatatgttacatgggagcactggactagcgataaagccatcgagttgatcgatccatcattgggaaaccactatccagttgataaggtgctgaagtgcatccacattgggctactctgtgttcaaccgaaacctgctgataggccattgatgtcagctgttaatgccatgcttagtagtactggtacagtccgtctcccatgcttgtccaggccttcattttgggtccaggagattggtgctactgctagctaa
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| Protein seq | MSMACYYLAAAAAGLALLLLHAPLTDAQTLVPLCGDSGNYTEHGTYHANIQYLATSLPSYASSSPSLFASGSSGTVPDAIYALALCRGDTNSSSCATCVAAAIQSAQELCPLVKTVIVYDDTCILRFANDAFPISPTSNSQGMVVAWKAQNVSAAVAPAFEAAVVRLINTTADYAATDSVRRFGTGEEAFDETTFPKIYSLAQCTPDMAATACRSCLEDIVGRMVSGNLIGRMGGRVLGVRCNLWFEVYPFFSGRSLLQLPGPSPSPAPPVTAAGERSKNKRSAILAISMPTIALVLATIAAWFCSTSWRRRRLARKTLRPNAERIKELDWGQRFKIINGIARGLQYLHEDSQLKIVHRDLKASNVLLDSAYNPKISDFGLAKIFERDQSQVITHRIAGTYGYMSPEYAMRGQYSMKLDVYSFGVLVLEIITGRRNFGSYGSDHVVDLIYVTWEHWTSDKAIELIDPSLGNHYPVDKVLKCIHIGLLCVQPKPADRPLMSAVNAMLSSTGTVRLPCLSRPSFWVQEIGATAS |
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| Function | Cysteine-rich receptor-like protein kinase 10 [UniProtKB/Swiss-Prot:Q0D5R2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_07g0017920 | OsLima_07g0017920.02 | Chr07 | 22251304 | 22254787 | - | NAM | ||
| CDS seq | atgtccatggcctgctactacctcgccgccgcagccgccggcctcgccttgctgctgctccacgcgcccctcaccgatgcgcagacgctggtgcctttgtgtggtgacagcggcaactacacggagcacggcacgtatcacgcaaacatacagtacttagccacctccctgccatcgtacgcctcctcctccccctccctcttcgcctccggctcctcgggcacagttcccgatgccatctacgccctcgcgctctgtcgtggcgataccaactcttcctcctgcgctacctgcgttgccgcggccattcagagcgcccaggaactctgcccgctcgtcaagaccgtaatcgtctacgacgacacctgcatcctccgcttcgccaacgacgccttcccgatcagccctacctccaatagccaagggatggtcgttgcttggaaagcccaaaatgtcagcgcggcagtggctccggcttttgaggccgccgtcgtccgactcatcaacaccaccgccgactacgcagcaacggactccgtcaggcggttcggcacgggggaggaggcgttcgacgagacaacttttcccaagatctactcgctggcgcagtgcacgccagacatggcggcgactgcttgccggagctgcctcgaggatatagttgggaggatggtatctgggaatttgattgggaggatgggagggcgagttttgggcgtgcgatgcaacttatggtttgaggtataccctttcttctctggccgctctctgttgcaactcccggggccgtcgccttcaccggcgccaccggtgaccgcagccggagaaagatcgaaaaacaagagaagtgcaatactagccatttcaatgcctacaattgctctagtattagctactattgcagcatggttctgttcgacgagttggaggaggcggagactagcaagaaaaacattacgaccaaatgcagagagaatcaaagagcttgattggggccagaggttcaagatcataaatggcatagctagaggattgcaatatcttcacgaagattctcaactgaagatagttcatcgtgacctcaaagcaagcaatgttctcttggattctgcttataatcctaagatttctgactttggtctagctaagatattcgaaagggatcaatcacaagttatcactcaccgtatcgctgggacttag
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| Protein seq | MSMACYYLAAAAAGLALLLLHAPLTDAQTLVPLCGDSGNYTEHGTYHANIQYLATSLPSYASSSPSLFASGSSGTVPDAIYALALCRGDTNSSSCATCVAAAIQSAQELCPLVKTVIVYDDTCILRFANDAFPISPTSNSQGMVVAWKAQNVSAAVAPAFEAAVVRLINTTADYAATDSVRRFGTGEEAFDETTFPKIYSLAQCTPDMAATACRSCLEDIVGRMVSGNLIGRMGGRVLGVRCNLWFEVYPFFSGRSLLQLPGPSPSPAPPVTAAGERSKNKRSAILAISMPTIALVLATIAAWFCSTSWRRRRLARKTLRPNAERIKELDWGQRFKIINGIARGLQYLHEDSQLKIVHRDLKASNVLLDSAYNPKISDFGLAKIFERDQSQVITHRIAGT
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_07g0017920 | OsLima_07g0017920.01 | Chr07 | 22251304 | 22254842 | - | NAM | ||
| CDS seq | atgtccatggcctgctactacctcgccgccgcagccgccggcctcgccttgctgctgctccacgcgcccctcaccgatgcgcagacgctggtgcctttgtgtggtgacagcggcaactacacggagcacggcacgtatcacgcaaacatacagtacttagccacctccctgccatcgtacgcctcctcctccccctccctcttcgcctccggctcctcgggcacagttcccgatgccatctacgccctcgcgctctgtcgtggcgataccaactcttcctcctgcgctacctgcgttgccgcggccattcagagcgcccaggaactctgcccgctcgtcaagaccgtaatcgtctacgacgacacctgcatcctccgcttcgccaacgacgccttcccgatcagccctacctccaatagccaagggatggtcgttgcttggaaagcccaaaatgtcagcgcggcagtggctccggcttttgaggccgccgtcgtccgactcatcaacaccaccgccgactacgcagcaacggactccgtcaggcggttcggcacgggggaggaggcgttcgacgagacaacttttcccaagatctactcgctggcgcagtgcacgccagacatggcggcgactgcttgccggagctgcctcgaggatatagttgggaggatggtatctgggaatttgattgggaggatgggagggcgagttttgggcgtgcgatgcaacttatggtttgaggtataccctttcttctctggccgctctctgttgcaactcccggggccgtcgccttcaccggcgccaccggtgaccgcagccggagaaagatcgaaaaacaagagaagtgcaatactagccatttcaatgcctacaattgctctagtattagctactattgcagcatggttctgttcgacgagttggaggaggcggagactagcaagaaaaacattacgaccaaatgcagagagaatcaaagagcttgattggggccagaggttcaagatcataaatggcatagctagaggattgcaatatcttcacgaagattctcaactgaagatagttcatcgtgacctcaaagcaagcaatgttctcttggattctgcttataatcctaagatttctgactttggtctagctaagatattcgaaagggatcaatcacaagttatcactcaccgtatcgctgggacttatggatacatgtctccagagtatgcgatgcgcggacaatattcaatgaagttagacgtgtatagtttcggtgtcctggttttagagatcatcacaggaagaagaaactttggctcctacggttctgaccatgtggttgatctcatatatgttacatgggagcactggactagcgataaagccatcgagttgatcgatccatcattgggaaaccactatccagttgataaggtgctgaagtgcatccacattgggctactctgtgttcaaccgaaacctgctgataggccattgatgtcagctgttaatgccatgcttagtagtactggtacagtccgtctcccatgcttgtccaggccttcattttgggtccaggagattggtgctactgctagctaa
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| Protein seq | MSMACYYLAAAAAGLALLLLHAPLTDAQTLVPLCGDSGNYTEHGTYHANIQYLATSLPSYASSSPSLFASGSSGTVPDAIYALALCRGDTNSSSCATCVAAAIQSAQELCPLVKTVIVYDDTCILRFANDAFPISPTSNSQGMVVAWKAQNVSAAVAPAFEAAVVRLINTTADYAATDSVRRFGTGEEAFDETTFPKIYSLAQCTPDMAATACRSCLEDIVGRMVSGNLIGRMGGRVLGVRCNLWFEVYPFFSGRSLLQLPGPSPSPAPPVTAAGERSKNKRSAILAISMPTIALVLATIAAWFCSTSWRRRRLARKTLRPNAERIKELDWGQRFKIINGIARGLQYLHEDSQLKIVHRDLKASNVLLDSAYNPKISDFGLAKIFERDQSQVITHRIAGTYGYMSPEYAMRGQYSMKLDVYSFGVLVLEIITGRRNFGSYGSDHVVDLIYVTWEHWTSDKAIELIDPSLGNHYPVDKVLKCIHIGLLCVQPKPADRPLMSAVNAMLSSTGTVRLPCLSRPSFWVQEIGATAS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| RI | Chr07 | 22252007 | 22252466 | - | OsLima_07g0017920.02 | OsLima_07g0017920.01,OsLima_07g0017920.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.061382 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0541500 | RBH | 0.689723 | 0.978879 | 0.259216 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g35700 | SBH | 0.444602 | 0.732167 | 0.063605 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0541500 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0018240 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0018170 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0018150 | RBH | 0.000000 | 0.000000 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0018040 | SBH | 0.105079 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0018170 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0350600 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0018660 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0358400 | SBH | 1.1841445 | 13.820534 | 1.580925 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0017940 | SBH | 0.026354 | 0.135489 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0018080 | SBH | 0.276953 | 1.528085 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0017950 | SBH | 0.000000 | 2.410537 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0018240 | RBH | 0.098592 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0018050 | SBH | 0.121880 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G017960 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0018030 | SBH | 0.0 | 0.0 | 0.0 |
