Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_07g0017400 | OGI:07058250 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr07:21664760-21665611 | ||||||||
| Gene Symbol | WOX9, OsWOX9, DWL1 | ||||||||||
| DNA seq | atgcgtctcccagccctaaacgccgccacccactggatcccctccacctcgcccctaagtatccctcagaccctcaccatcacccgcgatcctccctacccaatgctgcctcgaagtcacggccaccggaccggcggcggcggcttctccctcaagtcctcgcccttctcgtcaggtaggtcccgcatcatccgtgcatgctactgtttgcgcttggtaggtagggtttcgttttgcgaggttagaggggatcgagatcgatcggtaggagggaattgatttgggatttttgtggttgttgcagtgggcgaggagagggttccggacccgaagccgcggcggaacccgcggccggagcagatccggatcctggaggccatcttcaactccggcatggtcaacccgccgcgcgacgagatcccgcgcatccgcatgcagctgcaggagtacggccaggtcggcgacgccaacgtcttctactggttccagaaccgcaagtcccgctccaagaacaagctgcgctccggcgggacaggccaagcggggctcgggctcggcggcaaccgggcctcagcgccggcggcggcggcgacggcgcaccgggaggccgtggcaccgtcgttcacgccgccaccgatcctcccgccccagccggtgcagccgcagcagcagcttgtctcgccggtggcggcgcccacctcgttgtcgtcatcgtcctccgaccgctcgtccgggtccagcaagcccgcgagggctacatcgacgcaggcaatgtccgtgacggcggccatggacctgctctcgctgctccgccgatcagctcggcctcggcaagagcagcgccatgtctag
More
|
||||||||||
| CDS seq | atgcgtctcccagccctaaacgccgccacccactggatcccctccacctcgcccctaagtatccctcagaccctcaccatcacccgcgatcctccctacccaatgctgcctcgaagtcacggccaccggaccggcggcggcggcttctccctcaagtcctcgcccttctcgtcaggtaggtcccgcatcatccgtgcatgctactgtttgcgcttggagtacggccaggtcggcgacgccaacgtcttctactggttccagaaccgcaagtcccgctccaagaacaagctgcgctccggcgggacaggccaagcggggctcgggctcggcggcaaccgggcctcagcgccggcggcggcggcgacggcgcaccgggaggccgtggcaccgtcgttcacgccgccaccgatcctcccgccccagccggtgcagccgcagcagcagcttgtctcgccggtggcggcgcccacctcgttgtcgtcatcgtcctccgaccgctcgtccgggtccagcaagcccgcgagggctacatcgacgcaggcaatgtccgtgacggcggccatggacctgctctcgctgctccgccgatcagctcggcctcggcaagagcagcgccatgtctag
More
|
||||||||||
| Protein seq | MRLPALNAATHWIPSTSPLSIPQTLTITRDPPYPMLPRSHGHRTGGGGFSLKSSPFSSGRSRIIRACYCLRLEYGQVGDANVFYWFQNRKSRSKNKLRSGGTGQAGLGLGGNRASAPAAAATAHREAVAPSFTPPPILPPQPVQPQQQLVSPVAAPTSLSSSSSDRSSGSSKPARATSTQAMSVTAAMDLLSLLRRSARPRQEQRHV |
||||||||||
| Function | WUSCHEL-related homeobox 13 [UniProtKB/Swiss-Prot:A3BKM2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_07g0017400 | OsLima_07g0017400.01 | Chr07 | 21664760 | 21665611 | + | NAM | ||
| CDS seq | atgcgtctcccagccctaaacgccgccacccactggatcccctccacctcgcccctaagtatccctcagaccctcaccatcacccgcgatcctccctacccaatgctgcctcgaagtcacggccaccggaccggcggcggcggcttctccctcaagtcctcgcccttctcgtcaggtaggtcccgcatcatccgtgcatgctactgtttgcgcttggagtacggccaggtcggcgacgccaacgtcttctactggttccagaaccgcaagtcccgctccaagaacaagctgcgctccggcgggacaggccaagcggggctcgggctcggcggcaaccgggcctcagcgccggcggcggcggcgacggcgcaccgggaggccgtggcaccgtcgttcacgccgccaccgatcctcccgccccagccggtgcagccgcagcagcagcttgtctcgccggtggcggcgcccacctcgttgtcgtcatcgtcctccgaccgctcgtccgggtccagcaagcccgcgagggctacatcgacgcaggcaatgtccgtgacggcggccatggacctgctctcgctgctccgccgatcagctcggcctcggcaagagcagcgccatgtctag
More
|
|||||||
| Protein seq | MRLPALNAATHWIPSTSPLSIPQTLTITRDPPYPMLPRSHGHRTGGGGFSLKSSPFSSGRSRIIRACYCLRLEYGQVGDANVFYWFQNRKSRSKNKLRSGGTGQAGLGLGGNRASAPAAAATAHREAVAPSFTPPPILPPQPVQPQQQLVSPVAAPTSLSSSSSDRSSGSSKPARATSTQAMSVTAAMDLLSLLRRSARPRQEQRHV
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0533201 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g34880 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0533201 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0017770 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0017660 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0017640 | RBH | 0.0 | 0.0 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0017530 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0017690 | RBH | 0.0 | 0.0 | 0.738070 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0341100 | RBH | 0.003849 | 0.0454585 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0018190 | RBH | 0.0 | 0.0 | 0.146720 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0355700 | RBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0017590 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0017530 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0017790 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0017570 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G017540 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0027610 | SBH | 0.0 | 0.0 | 0.0 |
