Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_07g0007550 | OGI:07019570 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr07:7217338-7218653 | ||||||||
| Gene Symbol | NAC3, OsNAC3, NAC67, ONAC067, OnNAC3*, OsNAC3/ONAC067, DLN180, OsDLN180 | ||||||||||
| DNA seq | acaccacatccatcaaaccaccaccctcattccctcaagtcccaacatcgaacacctcgtgtccatggcggcgtcggcggcggcgaagcggcgagtgcgcgacgcggaggcggacctgaacctcccgccgggcttccgcttccaccccaccgacgaggagctggtggcgcactacctctgcccgcgcgccgcgggccgccccgccccggtccccatcatcgccgagctcgacctctaccgctacgacccctgggacctccccgccctcgccctcttcggccgccgcgagtggtacttcttcaccccgcgcgaccgcaagtaccccaacggctcccgccccaaccgcgccgccgcctccggctactggaaggccaccggcgccgacaagcccgtgctgcacaacggcaggacggccgggatcaagaaggcgctcgtgttctaccacggcaagcccccccgcggcgtcaagacggagtggatcatgcacgagtaccgcctcgccaagaagggcggcgccgccgccgccgcgggcgcgggcgcgctcaggctggatgactgggtgctgtgccggctgtacaacaagaagaacgagtgggagaagatgcagagcaggaaggaggaggaggaggccatggcggcggcgcagtcgtggggggagacgcggacgccggagtcggaggtcgtcgacagcgacgcgttcccggagatggactactcgctgccggcggcgtcgttcgacgacgccctgctgcccaaggaggaggcgcgcgacgacgactggctcatggggatgagcctcgacgacctccagggcctcggctcgctgctgcaggccgacgacctctccttgctcgcgccgccggcggcggcgaagacggagccgctcggcgcgccattcttctgagctctctctctctctctctctctctctctctgtgactgcaccactgtatataaattcagagttttcagacatgttcagtattcagagttctcaggcaagttcagaattcagagatggttaaggattagtggcttatgagcagtatgatatgcaggttagtttctagtttagcagtgttactccagattggagatttgattaatgatttgattctaattaatgtagtatactgagtgttactcatcatcacagattcatcagagctgtgtcaagtgacaattctttttttttttttatttcctggatcaagttcaccatgttgtgctcaagatttgtggataaatgcacatccatccttgaattggcattgcttatgttcttttcattcgatgatttaacaaggatttgatac
More
|
||||||||||
| CDS seq | atggcggcgtcggcggcggcgaagcggcgagtgcgcgacgcggaggcggacctgaacctcccgccgggcttccgcttccaccccaccgacgaggagctggtggcgcactacctctgcccgcgcgccgcgggccgccccgccccggtccccatcatcgccgagctcgacctctaccgctacgacccctgggacctccccgccctcgccctcttcggccgccgcgagtggtacttcttcaccccgcgcgaccgcaagtaccccaacggctcccgccccaaccgcgccgccgcctccggctactggaaggccaccggcgccgacaagcccgtgctgcacaacggcaggacggccgggatcaagaaggcgctcgtgttctaccacggcaagcccccccgcggcgtcaagacggagtggatcatgcacgagtaccgcctcgccaagaagggcggcgccgccgccgccgcgggcgcgggcgcgctcaggctggatgactgggtgctgtgccggctgtacaacaagaagaacgagtgggagaagatgcagagcaggaaggaggaggaggaggccatggcggcggcgcagtcgtggggggagacgcggacgccggagtcggaggtcgtcgacagcgacgcgttcccggagatggactactcgctgccggcggcgtcgttcgacgacgccctgctgcccaaggaggaggcgcgcgacgacgactggctcatggggatgagcctcgacgacctccagggcctcggctcgctgctgcaggccgacgacctctccttgctcgcgccgccggcggcggcgaagacggagccgctcggcgcgccattcttctga
More
|
||||||||||
| Protein seq | MAASAAAKRRVRDAEADLNLPPGFRFHPTDEELVAHYLCPRAAGRPAPVPIIAELDLYRYDPWDLPALALFGRREWYFFTPRDRKYPNGSRPNRAAASGYWKATGADKPVLHNGRTAGIKKALVFYHGKPPRGVKTEWIMHEYRLAKKGGAAAAAGAGALRLDDWVLCRLYNKKNEWEKMQSRKEEEEAMAAAQSWGETRTPESEVVDSDAFPEMDYSLPAASFDDALLPKEEARDDDWLMGMSLDDLQGLGSLLQADDLSLLAPPAAAKTEPLGAPFF |
||||||||||
| Function | NAC domain-containing protein 67 [UniProtKB/Swiss-Prot:Q7EZT1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_07g0007550 | OsLima_07g0007550.01 | Chr07 | 7217338 | 7218653 | + | NAM | ||
| CDS seq | atggcggcgtcggcggcggcgaagcggcgagtgcgcgacgcggaggcggacctgaacctcccgccgggcttccgcttccaccccaccgacgaggagctggtggcgcactacctctgcccgcgcgccgcgggccgccccgccccggtccccatcatcgccgagctcgacctctaccgctacgacccctgggacctccccgccctcgccctcttcggccgccgcgagtggtacttcttcaccccgcgcgaccgcaagtaccccaacggctcccgccccaaccgcgccgccgcctccggctactggaaggccaccggcgccgacaagcccgtgctgcacaacggcaggacggccgggatcaagaaggcgctcgtgttctaccacggcaagcccccccgcggcgtcaagacggagtggatcatgcacgagtaccgcctcgccaagaagggcggcgccgccgccgccgcgggcgcgggcgcgctcaggctggatgactgggtgctgtgccggctgtacaacaagaagaacgagtgggagaagatgcagagcaggaaggaggaggaggaggccatggcggcggcgcagtcgtggggggagacgcggacgccggagtcggaggtcgtcgacagcgacgcgttcccggagatggactactcgctgccggcggcgtcgttcgacgacgccctgctgcccaaggaggaggcgcgcgacgacgactggctcatggggatgagcctcgacgacctccagggcctcggctcgctgctgcaggccgacgacctctccttgctcgcgccgccggcggcggcgaagacggagccgctcggcgcgccattcttctga
More
|
|||||||
| Protein seq | MAASAAAKRRVRDAEADLNLPPGFRFHPTDEELVAHYLCPRAAGRPAPVPIIAELDLYRYDPWDLPALALFGRREWYFFTPRDRKYPNGSRPNRAAASGYWKATGADKPVLHNGRTAGIKKALVFYHGKPPRGVKTEWIMHEYRLAKKGGAAAAAGAGALRLDDWVLCRLYNKKNEWEKMQSRKEEEEAMAAAQSWGETRTPESEVVDSDAFPEMDYSLPAASFDDALLPKEEARDDDWLMGMSLDDLQGLGSLLQADDLSLLAPPAAAKTEPLGAPFF
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.187187 | 0.183747 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0225300 | RBH | 2.823668 | 3.895645 | 0.476611 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g12340 | RBH | 1.820799 | 2.498418 | 0.116989 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0225300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0007750 | RBH | 0.144906 | 0.0 | 0.488604 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0007730 | RBH | 0.0 | 0.825766 | 1.176884 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0007620 | RBH | 0.648915 | 3.128104 | 1.016802 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0007540 | RBH | 0.054860 | 0.091513 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0007580 | RBH | 2.198560 | 14.654346 | 5.627898 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0116900 | RBH | 10.411393 | 70.8628195 | 5.140738 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0008070 | RBH | 0.074772 | 0.653841 | 0.081367 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0117200 | RBH | 6.6541055 | 26.1361925 | 1.1563075 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0039400 | RBH | 0.164828 | 0.436141 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0007570 | RBH | 0.140492 | 2.334652 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0007580 | RBH | 0.0 | 4.921475 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0007820 | RBH | 0.426679 | 0.552609 | 0.532892 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0007650 | RBH | 0.091382 | 2.917738 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G007690 | RBH | 0.0 | 2.741935 | 0.274161 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0007530 | RBH | 0.363910 | 3.088327 | 3.064042 |
