Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_07g0002940 | OGI:07007300 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr07:2729922-2733044 | ||||||||
| Gene Symbol | OsCrRLK1L15 | ||||||||||
| DNA seq | gagaactgaaaaactcattcactctgtagcacatctccagttaatgctcagtattgcattgcatacggctctagaattttacaaaagaatcaatgaaatttgcatcataaagacttgtacatcagcacaagtacaaaagaaatgaagagagttttctcctaactgtaccaaaataatctcagtacattgtagggacactcatatatggtgttacaatactagatagcagtgcatctaaacatttttgttaatttgacactcaccctattcagttgcttgaagccactagtttgaccagcattccattatcatggaacttcaattttgacatccacatattcctcattcacatcctgggaccctgcacggcaggattcctcaacttcttcgatgcaccctaaattgcaggatgcatcagagagcttcagttcaggctgtgataaatcatcagtattcgcactttgcagaagaccttgatgcaactgcaaagcactctctaggtgccacaggacttcaccaatcgaaggccggcttctcccttcatctgcaaggcatttttcagctatctcactgaatttcctgatggactccagtgtgtaatttccctctaaccgagggtcgattatggtctcaagtaacttctgcttttgccacttgagagcccactcagcaaggtttatctgatctcttggcaaggccgggtttatgactggccgagcacatagaacttcaaacagcacaacgccaaaagagtacacatctgaactttgggttaactgctgcctccgataatattctggatcaaggtaaccaaaactccccttaacagcagtactaacatgagtatgatctaaaggtggaccatctttcgagataccaaaatctgccatctttgcaacaaagttgtcatccaacaagatattagtagtcttgacatccctgtggattatacccctgtcaagtccagtgtgaaggtagtgaagcccccgggctgcgccgatacatatttcaagcctctgcttccatgtaagagcaggaagatcagttccataaaggtggctcctcaaggtaccatttgccatgtgctcataaactaagatcatctcattttgctcatcacagtagccaatcaaggacacaaggtgtcggtgtcgcagtcttgagaggatctcgatctcagtttcaaactccttcacaccctgctgagactctggatgccccctcttgattgccatcagcttgccatcttccatctctcccttgtagaccttgccgaaaccaccaacaccgatcaccaaggaatcatcaaagttcatggtggcttctctgatttctgcaacagtgaactgccttcccatcctgttgctcccaaacgtacctgctgcacgaagagttggggagcgggaatttgctgcaggtgttgtagcaccatggagcacaagtggcctccaacctggtggattatccttggttttgttagctgaagtcttcttcttccgtcgcagatagaaacatacgaaaataacaccaacaattgacacaaaaatcaccaaaccagcagctgcaccaattagtacccacttggggctacgtttcggtttccccatggcactgttgaaacctccaatcctcacagttggatgagcaagattcccattccgactgaccttaaagatctccatgccattcagaagtgcatcagtagctgcaggacctgctgaggattcagatcccaactgaacccaaagagtgtccatctgcggtgaggcggcatcaaggaagtcctcatgaaaagccttgttcttccccccggctttcgcaaacacgtcatagttctcagcagcagtcttgttgtttatgtaaatcttgaacttgcgctgctccgccttgtcatactccagctcacagaaatgcaaccggaccaagtaatcaaaatcagggtcaacattaaagctccaagacacattgaatttcttgtccatgactgaactctccgtcgtcaccctggcagtttcatagagcctcaaaggcgccgaggtagaatcatcacttgacacatagcttatattggaagaattggagatggcgcgcgcagcactcatagagaatatgaaattttcatctgaatcccacttcctccacaagccaggatcctccttactctctatcttgccacaccccacacaaatcctatacatcgtctcgaccgcgctatccccaagactgaaaggacccttcaagccataaccaccaaccttgttaaccgaatcaaaaaccgagttgccagacacaggcacaatctccattgcattgatgaaggcgaacgattcggcgtcgggggagaactcaatctccaagttactggaggtgacattgagaagatactccttcacgatggcgcggctggtggagttgatcttggagttcctcaggtagatctctgcagggacattgaacttggagaccagcttcaggccatttgctgaaacatcaaagagtgattctttggtgctgaaattagtgggtagctgactgaaatggagccggagaaagtagctcccggcagcggcgacgatgaacttgtagcttgaggatgaattgaagatccgggcattcttgtacaaatctccatatgtctctttcccatcagaatctggagctgtggcaactgttcctggtaagctgagtgtgaagttcttgggagaagaatccccaatccatctcctgccatcaacatcggtggtggaatctgagccgcagttgatcaagatcggcttggattttgatcctcgcacatcctccaaaatcgagaatagaacaagaatcaacagcaaccaagcgaaagactccatcttcatcttgggcaatcctcgataacctccagcgccgcaattcttgggaggactactaaaccctagctgaatcaccaaagatttgtttctccttgatgtgtagaaatccgaactgcgagcggcgatgaacccggagtcgttaatcacgagaggggaaaggcaatggaacagattaagaacagggaagaatatgacaggtgaaaacaaatactgaaatcgaagcgaagaatggagaaatgggaagatttcaggttcttggctccaactcacc
More
|
||||||||||
| CDS seq | atgaagatggagtctttcgcttggttgctgttgattcttgttctattctcgattttggaggatgtgcgaggatcaaaatccaagccgatcttgatcaactgcggctcagattccaccaccgatgttgatggcaggagatggattggggattcttctcccaagaacttcacactcagcttaccaggaacagttgccacagctccagattctgatgggaaagagacatatggagatttgtacaagaatgcccggatcttcaattcatcctcaagctacaagttcatcgtcgccgctgccgggagctactttctccggctccatttcagtcagctacccactaatttcagcaccaaagaatcactctttgatgtttcagcaaatggcctgaagctggtctccaagttcaatgtccctgcagagatctacctgaggaactccaagatcaactccaccagccgcgccatcgtgaaggagtatcttctcaatgtcacctccagtaacttggagattgagttctcccccgacgccgaatcgttcgccttcatcaatgcaatggagattgtgcctgtgtctggcaactcggtttttgattcggttaacaaggttggtggttatggcttgaagggtcctttcagtcttggggatagcgcggtcgagacgatgtataggatttgtgtggggtgtggcaagatagagagtaaggaggatcctggcttgtggaggaagtgggattcagatgaaaatttcatattctctatgagtgctgcgcgcgccatctccaattcttccaatataagctatgtgtcaagtgatgattctacctcggcgcctttgaggctctatgaaactgccagggtgacgacggagagttcagtcatggacaagaaattcaatgtgtcttggagctttaatgttgaccctgattttgattacttggtccggttgcatttctgtgagctggagtatgacaaggcggagcagcgcaagttcaagatttacataaacaacaagactgctgctgagaactatgacgtgtttgcgaaagccggggggaagaacaaggcttttcatgaggacttccttgatgccgcctcaccgcagatggacactctttgggttcagttgggatctgaatcctcagcaggtcctgcagctactgatgcacttctgaatggcatggagatctttaaggtcagtcggaatgggaatcttgctcatccaactgtgaggattggaggtttcaacagtgccatggggaaaccgaaacgtagccccaagtgggtactaattggtgcagctgctggtttggtgatttttgtgtcaattgttggtgttattttcgtatgtttctatctgcgacggaagaagaagacttcagctaacaaaaccaaggataatccaccaggttggaggccacttgtgctccatggtgctacaacacctgcagcaaattcccgctccccaactcttcgtgcagcaggtacgtttgggagcaacaggatgggaaggcagttcactgttgcagaaatcagagaagccaccatgaactttgatgattccttggtgatcggtgttggtggtttcggcaaggtctacaagggagagatggaagatggcaagctgatggcaatcaagagggggcatccagagtctcagcagggtgtgaaggagtttgaaactgagatcgagatcctctcaagactgcgacaccgacaccttgtgtccttgattggctactgtgatgagcaaaatgagatgatcttagtttatgagcacatggcaaatggtaccttgaggagccacctttatggaactgatcttcctgctcttacatggaagcagaggcttgaaatatgtatcggcgcagcccgggggcttcactaccttcacactggacttgacaggggtataatccacagggatgtcaagactactaatatcttgttggatgacaactttgttgcaaagatggcagattttggtatctcgaaagatggtccacctttagatcatactcatgttagtactgctgttaaggggagttttggttaccttgatccagaatattatcggaggcagcagttaacccaaagttcagatgtgtactcttttggcgttgtgctgtttgaagttctatgtgctcggccagtcataaacccggccttgccaagagatcagataaaccttgctgagtgggctctcaagtggcaaaagcagaagttacttgagaccataatcgaccctcggttagagggaaattacacactggagtccatcaggaaattcagtgagatagctgaaaaatgccttgcagatgaagggagaagccggccttcgattggtgaagtcctgtggcacctagagagtgctttgcagttgcatcaaggtcttctgcaaagtgcgaatactgatgatttatcacagcctgaactgaagctctctgatgcatcctgcaatttagggtgcatcgaagaagttgaggaatcctgccgtgcagggtcccaggatgtgaatgaggaatatgtggatgtcaaaattgaagttccatga
More
|
||||||||||
| Protein seq | MKMESFAWLLLILVLFSILEDVRGSKSKPILINCGSDSTTDVDGRRWIGDSSPKNFTLSLPGTVATAPDSDGKETYGDLYKNARIFNSSSSYKFIVAAAGSYFLRLHFSQLPTNFSTKESLFDVSANGLKLVSKFNVPAEIYLRNSKINSTSRAIVKEYLLNVTSSNLEIEFSPDAESFAFINAMEIVPVSGNSVFDSVNKVGGYGLKGPFSLGDSAVETMYRICVGCGKIESKEDPGLWRKWDSDENFIFSMSAARAISNSSNISYVSSDDSTSAPLRLYETARVTTESSVMDKKFNVSWSFNVDPDFDYLVRLHFCELEYDKAEQRKFKIYINNKTAAENYDVFAKAGGKNKAFHEDFLDAASPQMDTLWVQLGSESSAGPAATDALLNGMEIFKVSRNGNLAHPTVRIGGFNSAMGKPKRSPKWVLIGAAAGLVIFVSIVGVIFVCFYLRRKKKTSANKTKDNPPGWRPLVLHGATTPAANSRSPTLRAAGTFGSNRMGRQFTVAEIREATMNFDDSLVIGVGGFGKVYKGEMEDGKLMAIKRGHPESQQGVKEFETEIEILSRLRHRHLVSLIGYCDEQNEMILVYEHMANGTLRSHLYGTDLPALTWKQRLEICIGAARGLHYLHTGLDRGIIHRDVKTTNILLDDNFVAKMADFGISKDGPPLDHTHVSTAVKGSFGYLDPEYYRRQQLTQSSDVYSFGVVLFEVLCARPVINPALPRDQINLAEWALKWQKQKLLETIIDPRLEGNYTLESIRKFSEIAEKCLADEGRSRPSIGEVLWHLESALQLHQGLLQSANTDDLSQPELKLSDASCNLGCIEEVEESCRAGSQDVNEEYVDVKIEVP |
||||||||||
| Function | Probable receptor-like protein kinase At1g30570 [UniProtKB/Swiss-Prot:Q9SA72] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_07g0002940 | OsLima_07g0002940.01 | Chr07 | 2729922 | 2733044 | - | NAM | ||
| CDS seq | atgaagatggagtctttcgcttggttgctgttgattcttgttctattctcgattttggaggatgtgcgaggatcaaaatccaagccgatcttgatcaactgcggctcagattccaccaccgatgttgatggcaggagatggattggggattcttctcccaagaacttcacactcagcttaccaggaacagttgccacagctccagattctgatgggaaagagacatatggagatttgtacaagaatgcccggatcttcaattcatcctcaagctacaagttcatcgtcgccgctgccgggagctactttctccggctccatttcagtcagctacccactaatttcagcaccaaagaatcactctttgatgtttcagcaaatggcctgaagctggtctccaagttcaatgtccctgcagagatctacctgaggaactccaagatcaactccaccagccgcgccatcgtgaaggagtatcttctcaatgtcacctccagtaacttggagattgagttctcccccgacgccgaatcgttcgccttcatcaatgcaatggagattgtgcctgtgtctggcaactcggtttttgattcggttaacaaggttggtggttatggcttgaagggtcctttcagtcttggggatagcgcggtcgagacgatgtataggatttgtgtggggtgtggcaagatagagagtaaggaggatcctggcttgtggaggaagtgggattcagatgaaaatttcatattctctatgagtgctgcgcgcgccatctccaattcttccaatataagctatgtgtcaagtgatgattctacctcggcgcctttgaggctctatgaaactgccagggtgacgacggagagttcagtcatggacaagaaattcaatgtgtcttggagctttaatgttgaccctgattttgattacttggtccggttgcatttctgtgagctggagtatgacaaggcggagcagcgcaagttcaagatttacataaacaacaagactgctgctgagaactatgacgtgtttgcgaaagccggggggaagaacaaggcttttcatgaggacttccttgatgccgcctcaccgcagatggacactctttgggttcagttgggatctgaatcctcagcaggtcctgcagctactgatgcacttctgaatggcatggagatctttaaggtcagtcggaatgggaatcttgctcatccaactgtgaggattggaggtttcaacagtgccatggggaaaccgaaacgtagccccaagtgggtactaattggtgcagctgctggtttggtgatttttgtgtcaattgttggtgttattttcgtatgtttctatctgcgacggaagaagaagacttcagctaacaaaaccaaggataatccaccaggttggaggccacttgtgctccatggtgctacaacacctgcagcaaattcccgctccccaactcttcgtgcagcaggtacgtttgggagcaacaggatgggaaggcagttcactgttgcagaaatcagagaagccaccatgaactttgatgattccttggtgatcggtgttggtggtttcggcaaggtctacaagggagagatggaagatggcaagctgatggcaatcaagagggggcatccagagtctcagcagggtgtgaaggagtttgaaactgagatcgagatcctctcaagactgcgacaccgacaccttgtgtccttgattggctactgtgatgagcaaaatgagatgatcttagtttatgagcacatggcaaatggtaccttgaggagccacctttatggaactgatcttcctgctcttacatggaagcagaggcttgaaatatgtatcggcgcagcccgggggcttcactaccttcacactggacttgacaggggtataatccacagggatgtcaagactactaatatcttgttggatgacaactttgttgcaaagatggcagattttggtatctcgaaagatggtccacctttagatcatactcatgttagtactgctgttaaggggagttttggttaccttgatccagaatattatcggaggcagcagttaacccaaagttcagatgtgtactcttttggcgttgtgctgtttgaagttctatgtgctcggccagtcataaacccggccttgccaagagatcagataaaccttgctgagtgggctctcaagtggcaaaagcagaagttacttgagaccataatcgaccctcggttagagggaaattacacactggagtccatcaggaaattcagtgagatagctgaaaaatgccttgcagatgaagggagaagccggccttcgattggtgaagtcctgtggcacctagagagtgctttgcagttgcatcaaggtcttctgcaaagtgcgaatactgatgatttatcacagcctgaactgaagctctctgatgcatcctgcaatttagggtgcatcgaagaagttgaggaatcctgccgtgcagggtcccaggatgtgaatgaggaatatgtggatgtcaaaattgaagttccatga
More
|
|||||||
| Protein seq | MKMESFAWLLLILVLFSILEDVRGSKSKPILINCGSDSTTDVDGRRWIGDSSPKNFTLSLPGTVATAPDSDGKETYGDLYKNARIFNSSSSYKFIVAAAGSYFLRLHFSQLPTNFSTKESLFDVSANGLKLVSKFNVPAEIYLRNSKINSTSRAIVKEYLLNVTSSNLEIEFSPDAESFAFINAMEIVPVSGNSVFDSVNKVGGYGLKGPFSLGDSAVETMYRICVGCGKIESKEDPGLWRKWDSDENFIFSMSAARAISNSSNISYVSSDDSTSAPLRLYETARVTTESSVMDKKFNVSWSFNVDPDFDYLVRLHFCELEYDKAEQRKFKIYINNKTAAENYDVFAKAGGKNKAFHEDFLDAASPQMDTLWVQLGSESSAGPAATDALLNGMEIFKVSRNGNLAHPTVRIGGFNSAMGKPKRSPKWVLIGAAAGLVIFVSIVGVIFVCFYLRRKKKTSANKTKDNPPGWRPLVLHGATTPAANSRSPTLRAAGTFGSNRMGRQFTVAEIREATMNFDDSLVIGVGGFGKVYKGEMEDGKLMAIKRGHPESQQGVKEFETEIEILSRLRHRHLVSLIGYCDEQNEMILVYEHMANGTLRSHLYGTDLPALTWKQRLEICIGAARGLHYLHTGLDRGIIHRDVKTTNILLDDNFVAKMADFGISKDGPPLDHTHVSTAVKGSFGYLDPEYYRRQQLTQSSDVYSFGVVLFEVLCARPVINPALPRDQINLAEWALKWQKQKLLETIIDPRLEGNYTLESIRKFSEIAEKCLADEGRSRPSIGEVLWHLESALQLHQGLLQSANTDDLSQPELKLSDASCNLGCIEEVEESCRAGSQDVNEEYVDVKIEVP
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0147600 | RBH | 0.120267 | 0.0 | 5.118287 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g05370 | RBH | 0.045964 | 0.0 | 1.136915 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0147600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0003000 | RBH | 0.093954 | 6.270463 | 2.301793 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0003010 | RBH | 0.000000 | 0.643762 | 1.620215 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0002910 | RBH | 0.000000 | 5.977010 | 5.434023 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0002840 | RBH | 0.045670 | 0.399020 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0002940 | RBH | 0.0 | 12.711877 | 7.249558 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0041500 | RBH | 2.331507 | 1.426305 | 20.206691 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0002910 | RBH | 0.000000 | 0.753039 | 1.375873 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0047000 | RBH | 4.7909795 | 0.260938 | 17.362015 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0002870 | RBH | 0.0 | 0.168434 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0002950 | RBH | 0.0 | 2.636196 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0002940 | RBH | 0.754318 | 9.098329 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0003030 | RBH | 0.149341 | 0.801354 | 1.575460 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0002920 | RBH | 0.070443 | 3.732663 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G003020 | RBH | 0.0 | 4.602052 | 2.001966 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0002820 | RBH | 0.152177 | 5.557728 | 7.012259 |
