Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_06g0029600 | OGI:06086310 | 15/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr06:32115752-32116630 | ||||||||
| Gene Symbol | NAC95, ONAC095, ONAC95 | ||||||||||
| DNA seq | tcagaagttgaggacgctggcgtagtagggcgaccaggtctccatccatgggctccgcagctgcgtcaggaatggctcctgcatccactccagcccgctctgcggcctcgccacctccagctgcggcaggctcagcgtcgccggccggaccagctcatgcgccgccgccgacgcctcatccacccccaccacctctttcttcatggcgtccgaggaggaggagatggagatggaggaggagtcctgctgcaggggcgagccggtgttgtgggtgccggaggacgtggtggagcgtgcaagctcctccatggcgaccctctgctccagctccttgagggagaccgccttccggtagaccttgcagagcaccatgtcgtcgtgttgcatttgcaattgcatggtgtcgggaatggcggcggcgtcggggaggcggtactcgttcatgacccagtcggtcttggtgccgcgaggggcgcggccctcgtagtagacgagcgtcttcttgaggccgatgaggcgcttggggtcggcggcgcagcggatggcgcggtcggagccggtggccttccagaagccgcgctccgtggtgcggctgggcctaccgccgccgccgccgccggtggcctgcttgcggtcgcgggggacgaagaagtaccactcgcgctcgccgatgcgggcgagtccggggagctcgcgcgggtcgtggcggtagaggtggacggtggggatgatgtcgaacttgagcttcttcccctgcaccacctgcttcaggtagaactccagcagctcctcctccgtcggatggaacctgaatcccggcagctgctccacctccacctctcctcctgccgccgtcgacctgctccgctgctgctccat
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| CDS seq | atggagcagcagcggagcaggtcgacggcggcaggaggagaggtggaggtggagcagctgccgggattcaggttccatccgacggaggaggagctgctggagttctacctgaagcaggtggtgcaggggaagaagctcaagttcgacatcatccccaccgtccacctctaccgccacgacccgcgcgagctccccggactcgcccgcatcggcgagcgcgagtggtacttcttcgtcccccgcgaccgcaagcaggccaccggcggcggcggcggcggtaggcccagccgcaccacggagcgcggcttctggaaggccaccggctccgaccgcgccatccgctgcgccgccgaccccaagcgcctcatcggcctcaagaagacgctcgtctactacgagggccgcgcccctcgcggcaccaagaccgactgggtcatgaacgagtaccgcctccccgacgccgccgccattcccgacaccatgcaattgcaaatgcaacacgacgacatggtgctctgcaaggtctaccggaaggcggtctccctcaaggagctggagcagagggtcgccatggaggagcttgcacgctccaccacgtcctccggcacccacaacaccggctcgcccctgcagcaggactcctcctccatctccatctcctcctcctcggacgccatgaagaaagaggtggtgggggtggatgaggcgtcggcggcggcgcatgagctggtccggccggcgacgctgagcctgccgcagctggaggtggcgaggccgcagagcgggctggagtggatgcaggagccattcctgacgcagctgcggagcccatggatggagacctggtcgccctactacgccagcgtcctcaacttctga
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| Protein seq | MEQQRSRSTAAGGEVEVEQLPGFRFHPTEEELLEFYLKQVVQGKKLKFDIIPTVHLYRHDPRELPGLARIGEREWYFFVPRDRKQATGGGGGGRPSRTTERGFWKATGSDRAIRCAADPKRLIGLKKTLVYYEGRAPRGTKTDWVMNEYRLPDAAAIPDTMQLQMQHDDMVLCKVYRKAVSLKELEQRVAMEELARSTTSSGTHNTGSPLQQDSSSISISSSSDAMKKEVVGVDEASAAAHELVRPATLSLPQLEVARPQSGLEWMQEPFLTQLRSPWMETWSPYYASVLNF |
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| Function | NAC domain-containing protein 22 [UniProtKB/Swiss-Prot:Q10S65] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_06g0029600 | OsLima_06g0029600.01 | Chr06 | 32115752 | 32116630 | - | NAM | ||
| CDS seq | atggagcagcagcggagcaggtcgacggcggcaggaggagaggtggaggtggagcagctgccgggattcaggttccatccgacggaggaggagctgctggagttctacctgaagcaggtggtgcaggggaagaagctcaagttcgacatcatccccaccgtccacctctaccgccacgacccgcgcgagctccccggactcgcccgcatcggcgagcgcgagtggtacttcttcgtcccccgcgaccgcaagcaggccaccggcggcggcggcggcggtaggcccagccgcaccacggagcgcggcttctggaaggccaccggctccgaccgcgccatccgctgcgccgccgaccccaagcgcctcatcggcctcaagaagacgctcgtctactacgagggccgcgcccctcgcggcaccaagaccgactgggtcatgaacgagtaccgcctccccgacgccgccgccattcccgacaccatgcaattgcaaatgcaacacgacgacatggtgctctgcaaggtctaccggaaggcggtctccctcaaggagctggagcagagggtcgccatggaggagcttgcacgctccaccacgtcctccggcacccacaacaccggctcgcccctgcagcaggactcctcctccatctccatctcctcctcctcggacgccatgaagaaagaggtggtgggggtggatgaggcgtcggcggcggcgcatgagctggtccggccggcgacgctgagcctgccgcagctggaggtggcgaggccgcagagcgggctggagtggatgcaggagccattcctgacgcagctgcggagcccatggatggagacctggtcgccctactacgccagcgtcctcaacttctga
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| Protein seq | MEQQRSRSTAAGGEVEVEQLPGFRFHPTEEELLEFYLKQVVQGKKLKFDIIPTVHLYRHDPRELPGLARIGEREWYFFVPRDRKQATGGGGGGRPSRTTERGFWKATGSDRAIRCAADPKRLIGLKKTLVYYEGRAPRGTKTDWVMNEYRLPDAAAIPDTMQLQMQHDDMVLCKVYRKAVSLKELEQRVAMEELARSTTSSGTHNTGSPLQQDSSSISISSSSDAMKKEVVGVDEASAAAHELVRPATLSLPQLEVARPQSGLEWMQEPFLTQLRSPWMETWSPYYASVLNF
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.203477 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0726300 | RBH | 1.182499 | 0.405795 | 0.481961 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g51070 | RBH | 0.883489 | 0.211967 | 0.146225 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0726300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0029680 | RBH | 0.332253 | 0.000000 | 0.601726 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0029480 | RBH | 0.217770 | 1.027130 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0029840 | RBH | 1.400870 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0029160 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0029670 | RBH | 0.999843 | 0.0 | 2.574828 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0440100 | SBH | 2.1129975 | 9.820345 | 0.261605 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0029060 | RBH | 0.557298 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0467400 | RBH | 2.690051 | 20.306198 | 0.399387 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0002670 | RBH | 0.151581 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0029670 | RBH | 0.0 | 3.436901 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0029390 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0029950 | RBH | 0.079281 | 0.227256 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0029470 | RBH | 0.0 | 1.446961 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G029370 | RBH | 0.134003 | 0.0 | 0.302280 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0029510 | RBH | 0.0 | 17.465260 | 0.0 |
