Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_06g0017000 | OGI:06048540 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr06:19114280-19115797 | ||||||||
| Gene Symbol | CYP76M9, CYP76M9 | ||||||||||
| DNA seq | atggggcacgaactctgggtgctatgggcaacgcttgccgtctcgctcctctgctacctctacctgaccagccaccgcctgggctcccgacggcgccggtggccgcctggcccccggccgctcccactcctcggcaacctcctggacctgcgtggcggcaacctccaccacacgctcgcgcgcctcgcccgcgcccatggcgcccccgtcatgcgcctccagctgggcctctccccggccgtggtcatctcctcgccgggcgccgcaagggaggcgttcaccgcgcacgaccggcgcctcgccgcccgcgccgtgccggacgccaaccacgcgctgggcttctgcgaccggtccatgatctggctccccagcgcggacccgatgtggcggaccctgcgcggcgtcgtggcggcgcacgccttctcgccgcgcgcgctcgccgcggcgcgcgccgtccacgagcgcaaggtgagggacctcgtggcgtacctccgcgggcgcgccgggcgggaggtggacgtcaaggacgccgtgtacggcggcgtgctgaacctggtgtccagcgcgctcttctccgccgacgtggtggacgtgggcggcgagtcggcgcaggggttccgggagctcgtggaggagctgatcgagtccatagccaagcccaacgtatccgacctcttcccgttcctccgtccgttcgacctgcaagggtggcgtcgctggacatccgggcacctggccaaaatctacaaggtcctggacgacataatcgaccgccggtcggccgaggacgacgccgccatggacaagcgcggagacttcctcgacgtgctgctggagctcatgtccacgggcaagatcgcgcgggagtacctgacgaacatcctgttcgacgtcttcaccgccgggagcgacaccatgtcgctgacggtggtgtgggcgatggccgagctgctccgcaacccgggcgtcatggcgaaggcacgggcggagatcgacgccgcactcggcggcagggaagcggtcgaggaggccgacgtggcgcggatgccgtacgtccaggccgtgctgaaggaggcgatgcggctgcacccggtggcccccgtgatgctgccgcgcaaggccgcggaggacggcgtcgagatcggcggattcgaggtgcccaggggctgcgccgtgatcttcaacacgtgggcgatcatgcgcgacccggcggcatgggagcggcccgacgagttcgtgccggagcggttcgtgggccgcagccgcgctacggaggagatggacttcagggggaaggacttcgggttcctcccgttcgggtcggggcggaggctgtgccccggcgtgccgatggcggagcgggtgctgcccctcatcatggcgtcgctgctgcacgcgttcgagtggcggctgccggacggcatgtcggcggagcagctcgacgtgagcgagaagttcaccaccgccaacgtcctggccgtccctctcaaagccgttccggtcgtgatcgcctgctag
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| CDS seq | atggggcacgaactctgggtgctatgggcaacgcttgccgtctcgctcctctgctacctctacctgaccagccaccgcctgggctcccgacggcgccggtggccgcctggcccccggccgctcccactcctcggcaacctcctggacctgcgtggcggcaacctccaccacacgctcgcgcgcctcgcccgcgcccatggcgcccccgtcatgcgcctccagctgggcctctccccggccgtggtcatctcctcgccgggcgccgcaagggaggcgttcaccgcgcacgaccggcgcctcgccgcccgcgccgtgccggacgccaaccacgcgctgggcttctgcgaccggtccatgatctggctccccagcgcggacccgatgtggcggaccctgcgcggcgtcgtggcggcgcacgccttctcgccgcgcgcgctcgccgcggcgcgcgccgtccacgagcgcaaggtgagggacctcgtggcgtacctccgcgggcgcgccgggcgggaggtggacgtcaaggacgccgtgtacggcggcgtgctgaacctggtgtccagcgcgctcttctccgccgacgtggtggacgtgggcggcgagtcggcgcaggggttccgggagctcgtggaggagctgatcgagtccatagccaagcccaacgtatccgacctcttcccgttcctccgtccgttcgacctgcaagggtggcgtcgctggacatccgggcacctggccaaaatctacaaggtcctggacgacataatcgaccgccggtcggccgaggacgacgccgccatggacaagcgcggagacttcctcgacgtgctgctggagctcatgtccacgggcaagatcgcgcgggagtacctgacgaacatcctgttcgacgtcttcaccgccgggagcgacaccatgtcgctgacggtggtgtgggcgatggccgagctgctccgcaacccgggcgtcatggcgaaggcacgggcggagatcgacgccgcactcggcggcagggaagcggtcgaggaggccgacgtggcgcggatgccgtacgtccaggccgtgctgaaggaggcgatgcggctgcacccggtggcccccgtgatgctgccgcgcaaggccgcggaggacggcgtcgagatcggcggattcgaggtgcccaggggctgcgccgtgatcttcaacacgtgggcgatcatgcgcgacccggcggcatgggagcggcccgacgagttcgtgccggagcggttcgtgggccgcagccgcgctacggaggagatggacttcagggggaaggacttcgggttcctcccgttcgggtcggggcggaggctgtgccccggcgtgccgatggcggagcgggtgctgcccctcatcatggcgtcgctgctgcacgcgttcgagtggcggctgccggacggcatgtcggcggagcagctcgacgtgagcgagaagttcaccaccgccaacgtcctggccgtccctctcaaagccgttccggtcgtgatcgcctgctag
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| Protein seq | MGHELWVLWATLAVSLLCYLYLTSHRLGSRRRRWPPGPRPLPLLGNLLDLRGGNLHHTLARLARAHGAPVMRLQLGLSPAVVISSPGAAREAFTAHDRRLAARAVPDANHALGFCDRSMIWLPSADPMWRTLRGVVAAHAFSPRALAAARAVHERKVRDLVAYLRGRAGREVDVKDAVYGGVLNLVSSALFSADVVDVGGESAQGFRELVEELIESIAKPNVSDLFPFLRPFDLQGWRRWTSGHLAKIYKVLDDIIDRRSAEDDAAMDKRGDFLDVLLELMSTGKIAREYLTNILFDVFTAGSDTMSLTVVWAMAELLRNPGVMAKARAEIDAALGGREAVEEADVARMPYVQAVLKEAMRLHPVAPVMLPRKAAEDGVEIGGFEVPRGCAVIFNTWAIMRDPAAWERPDEFVPERFVGRSRATEEMDFRGKDFGFLPFGSGRRLCPGVPMAERVLPLIMASLLHAFEWRLPDGMSAEQLDVSEKFTTANVLAVPLKAVPVVIAC |
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| Function | Cytochrome P450 76M5 [UniProtKB/Swiss-Prot:Q6YTF5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_06g0017000 | OsLima_06g0017000.01 | Chr06 | 19114280 | 19115797 | + | NAM | ||
| CDS seq | atggggcacgaactctgggtgctatgggcaacgcttgccgtctcgctcctctgctacctctacctgaccagccaccgcctgggctcccgacggcgccggtggccgcctggcccccggccgctcccactcctcggcaacctcctggacctgcgtggcggcaacctccaccacacgctcgcgcgcctcgcccgcgcccatggcgcccccgtcatgcgcctccagctgggcctctccccggccgtggtcatctcctcgccgggcgccgcaagggaggcgttcaccgcgcacgaccggcgcctcgccgcccgcgccgtgccggacgccaaccacgcgctgggcttctgcgaccggtccatgatctggctccccagcgcggacccgatgtggcggaccctgcgcggcgtcgtggcggcgcacgccttctcgccgcgcgcgctcgccgcggcgcgcgccgtccacgagcgcaaggtgagggacctcgtggcgtacctccgcgggcgcgccgggcgggaggtggacgtcaaggacgccgtgtacggcggcgtgctgaacctggtgtccagcgcgctcttctccgccgacgtggtggacgtgggcggcgagtcggcgcaggggttccgggagctcgtggaggagctgatcgagtccatagccaagcccaacgtatccgacctcttcccgttcctccgtccgttcgacctgcaagggtggcgtcgctggacatccgggcacctggccaaaatctacaaggtcctggacgacataatcgaccgccggtcggccgaggacgacgccgccatggacaagcgcggagacttcctcgacgtgctgctggagctcatgtccacgggcaagatcgcgcgggagtacctgacgaacatcctgttcgacgtcttcaccgccgggagcgacaccatgtcgctgacggtggtgtgggcgatggccgagctgctccgcaacccgggcgtcatggcgaaggcacgggcggagatcgacgccgcactcggcggcagggaagcggtcgaggaggccgacgtggcgcggatgccgtacgtccaggccgtgctgaaggaggcgatgcggctgcacccggtggcccccgtgatgctgccgcgcaaggccgcggaggacggcgtcgagatcggcggattcgaggtgcccaggggctgcgccgtgatcttcaacacgtgggcgatcatgcgcgacccggcggcatgggagcggcccgacgagttcgtgccggagcggttcgtgggccgcagccgcgctacggaggagatggacttcagggggaaggacttcgggttcctcccgttcgggtcggggcggaggctgtgccccggcgtgccgatggcggagcgggtgctgcccctcatcatggcgtcgctgctgcacgcgttcgagtggcggctgccggacggcatgtcggcggagcagctcgacgtgagcgagaagttcaccaccgccaacgtcctggccgtccctctcaaagccgttccggtcgtgatcgcctgctag
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| Protein seq | MGHELWVLWATLAVSLLCYLYLTSHRLGSRRRRWPPGPRPLPLLGNLLDLRGGNLHHTLARLARAHGAPVMRLQLGLSPAVVISSPGAAREAFTAHDRRLAARAVPDANHALGFCDRSMIWLPSADPMWRTLRGVVAAHAFSPRALAAARAVHERKVRDLVAYLRGRAGREVDVKDAVYGGVLNLVSSALFSADVVDVGGESAQGFRELVEELIESIAKPNVSDLFPFLRPFDLQGWRRWTSGHLAKIYKVLDDIIDRRSAEDDAAMDKRGDFLDVLLELMSTGKIAREYLTNILFDVFTAGSDTMSLTVVWAMAELLRNPGVMAKARAEIDAALGGREAVEEADVARMPYVQAVLKEAMRLHPVAPVMLPRKAAEDGVEIGGFEVPRGCAVIFNTWAIMRDPAAWERPDEFVPERFVGRSRATEEMDFRGKDFGFLPFGSGRRLCPGVPMAERVLPLIMASLLHAFEWRLPDGMSAEQLDVSEKFTTANVLAVPLKAVPVVIAC
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0501900 | RBH | 0.0 | 0.0 | 0.711223 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g30640 | RBH | 0.0 | 0.0 | 0.151450 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0501900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0017070 | RBH | 0.0 | 0.0 | 0.382053 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0016890 | RBH | 0.084628 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0016990 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0017020 | RBH | 0.0 | 0.038858 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0017130 | RBH | 0.949934 | 0.0 | 0.522908 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0276400 | RBH | 0.417966 | 0.0556695 | 0.8967865 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0016640 | RBH | 0.0 | 0.0 | 0.112912 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0252000 | RBH | 0.608188 | 1.3831495 | 0.771599 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0016970 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0016650 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0017320 | RBH | 0.0 | 0.052421 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0016780 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G016770 | RBH | 0.0 | 0.0 | 0.201248 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0016930 | RBH | 0.0 | 0.0 | 0.0 |
