Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_06g0014200 | OGI:06037530 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr06:13464608-13467448 | ||||||||
| Gene Symbol | MAK6 | ||||||||||
| DNA seq | gatccaaacccaaacccttttgatttattaattaattaaccctcttgtggaaggataatacttaattacattttcctcgtggatctcttcactaactctcctcctactaccagataaatgcctgcagtgatggttgagacttgagagcttcagaaaagccatcgacaacattcagaggagtaaaaggaaaagacttacctaactgctaaacacttagctactaccactatatgtacaaaaaaagaagctagccccagacaattaatcggcggcggcgacgaggaggacgacgacctcatcgtggctcgatgacggtgatggagacgtcgttgacggacaccggcgaggcggtggagtcggtcttggtggtcatgagcggcggggcgaggaggagcgccctccGgagcctggtgaacatgggcggcctGgagggctcggggaggttcatgtggtcgctgatgagggcgaggaggacgttggacatggtgggccgcgcgtccgcgtcctcctgcacgcacaggagccccacgtggtagcaccgccacgcctcctccgccgcgtacccccgccccagcgccgggtccatgaactccgccgccaacccctccgtccacagcttccacgcctgaaaattaattaagtttatgactgagtttcagagcttgctttgctttgctttgagaccgatccagatcaatccatgcatggtgcctgatatatatgggaggcaatgtatgctactatctccatttcgtttttttaatttatttattatttattttataatgatttaatttatcataaaatatttttaagcataatttatatgtctttatgtttgtataaaatttttaaataaaatatattaagggttaacaacatcatctatttaaaaaaacgaagagattactatacatacgtcttggatgagggattgctggtgcTcctcgaggtagagcgcgccgttgcgctggccgctgaggatctctagcagcagaacgccgaagctgaacacgtcagacttcaccgagtagacgccctccagcgcgaactccggcgccatgtacccactacaagattaaatttgtgacattttaaaacttgagtacaaatcgataggaaaaagaggaaaagtttttttttttttgatgaactgaactttgggtgggggaaagcacaaGgtgaatgaacgtactaggtgccgaccacgcggccggtgttgacctcgttacactcgtcctcgaagatcttggccatgccgaagtcagagatcttggggctcatcttgtcatcgaggaggacattgctggccttgaggtctcggtgcaccaccttcagcaacgagtcctcgtgcaggtacaacaatcccctcgcgatccccacgatgatgttgtgcctcgtcgcccaCcccagctgcgcgctcttcccctcgtctgcaacaaaattcaCccatatgtcactgattgttactcccttccgtctcaaaatataaatatttttaactatgatttattatatttcgaaacagaattagtagttgttaatgcacggtcaaaaaaaattgcaagctttagttaacagccatatcagatcttgattaattaggacgatctagttagctagctagcgtaattgtcagtattctaggacggccatgtgagtatgtgagaacagtgttagtggtggtgggttactgttgatccgtggatgtggatcgatGggcggattaattgcttggtcgctggagatcaatggcggattaattgctcgtacggtgggatattgatggcgcgagctcagagccgctggattttccaactaccgtgaccgagagagagagagaggagacagcgagaccaccagccgtgaccgtggcagcagcaatggcggcgcggcgagaaggaggaggagaagaagaagaagagggcgaggcgtactgaagaggaaggcgtcgaggctgccgttggggaggaactcgtagacgaggagcttctcgtcgcgctcggcgcaccagccgaggaggcggaccaggttgcggtgctgcagcttggcgatgagctccacctcgttcctgaactccgccgcgccctgcctcgacctcgccgacagccgcttcaccgcgatctccgcgccgccgccggggagaacgccctgttccaccggtggtcagctcatcaatggagaggagagaggaggaggatggcgtttcgttaccctgtagacggggccgaagccgccctcgccgagcttgttggccttggagaagctgtcggtggcagcgtggatggaggcgaggtccatgagcggcaggtcggagctcgacatcggccgaagcctctccatctgcgccctcctcacagctgaatcatccaaccaatccaattcgatccatcaggaggggatcgagggagaagagaagcggaggaggaggagaagctgaccgttgcgcttgcgccatcgccagcagtagacgcagtagagcagcgtgcagaagatgacgaccaccagcacggacaccatgatcttcatcgcgtccttgctcgacccgcttttccctgcacaccaccaccaacccaacctcatcgcgatccatcagccataccatcaaacgaagaaccaaccaccaccaactgattgctcacctgcgttgtcctcccccgccggcgccggagccgacgacgacgacgcgcccatcagccggcggtggtgcccgccgccgccgccgctccaccgctccccggccacgtcgtacatcctagctagtatctctcacttgccagctcactcagctgatcgatgcttcttggctagggaacagatcgatcAGaggggcaaactgaa
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| CDS seq | atgtacgacgtggccggggagcggtggagcggcggcggcggcgggcaccaccgccggctgatgggcgcgtcgtcgtcgtcggctccggcgccggcgggggaggacaacgcagggaaaagcgggtcgagcaaggacgcgatgaagatcatggtgtccgtgctggtggtcgtcatcttctgcacgctgctctactgcgtctactgctggcgatggcgcaagcgcaacgctgtgaggagggcgcagatggagaggcttcggccgatgtcgagctccgacctgccgctcatggacctcgcctccatccacgctgccaccgacagcttctccaaggccaacaagctcggcgagggcggcttcggccccgtctacaggggcgttctccccggcggcggcgcggagatcgcggtgaagcggctgtcggcgaggtcgaggcagggcgcggcggagttcaggaacgaggtggagctcatcgccaagctgcagcaccgcaacctggtccgcctcctcggctggtgcgccgagcgcgacgagaagctcctcgtctacgagttcctccccaacggcagcctcgacgccttcctcttcagtacgcctcgccctcttcttcttcttctcctcctccttctcgccgcgccgccattgctgctgccacgtgggtacatggcgccggagttcgcgctggagggcgtctactcggcgtggaagctgtggacggaggggttggcggcggagttcatggacccggcgctggggcgggggtacgcggcggaggaggcgtggcggtgctaccacgtggggctcctgtgcgtgcaggaggacgcggacgcgcggcccaccatgtccaacgtcctcctcgccctcatcagcgaccacatgaacctccccgagccctcCaggccgcccatgttcaccaggctcCggagggcgctcctcctcgccccgccgctcatgaccaccaagaccgactccaccgcctcgccggtgtccgtcaacgacgtctccatcaccgtcatcgagccacgatga
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| Protein seq | MYDVAGERWSGGGGGHHRRLMGASSSSAPAPAGEDNAGKSGSSKDAMKIMVSVLVVVIFCTLLYCVYCWRWRKRNAVRRAQMERLRPMSSSDLPLMDLASIHAATDSFSKANKLGEGGFGPVYRGVLPGGGAEIAVKRLSARSRQGAAEFRNEVELIAKLQHRNLVRLLGWCAERDEKLLVYEFLPNGSLDAFLFSTPRPLLLLLLLLLAAPPLLLPRGYMAPEFALEGVYSAWKLWTEGLAAEFMDPALGRGYAAEEAWRCYHVGLLCVQEDADARPTMSNVLLALISDHMNLPEPSRPPMFTRLRRALLLAPPLMTTKTDSTASPVSVNDVSITVIEPR |
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| Function | Cysteine-rich receptor-like protein kinase 10 [UniProtKB/Swiss-Prot:Q8GYA4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_06g0014200 | OsLima_06g0014200.01 | Chr06 | 13464608 | 13467361 | - | NAM | ||
| CDS seq | atgtacgacgtggccggggagcggtggagcggcggcggcggcgggcaccaccgccggctgatgggcgcgtcgtcgtcgtcggctccggcgccggcgggggaggacaacgcagggaaaagcgggtcgagcaaggacgcgatgaagatcatggtgtccgtgctggtggtcgtcatcttctgcacgctgctctactgcgtctactgctggcgatggcgcaagcgcaacgctgtgaggagggcgcagatggagaggcttcggccgatgtcgagctccgacctgccgctcatggacctcgcctccatccacgctgccaccgacagcttctccaaggccaacaagctcggcgagggcggcttcggccccgtctacaggggcgttctccccggcggcggcgcggagatcgcggtgaagcggctgtcggcgaggtcgaggcagggcgcggcggagttcaggaacgaggtggagctcatcgccaagctgcagcaccgcaacctggtccgcctcctcggctggtgcgccgagcgcgacgagaagctcctcgtctacgagttcctccccaacggcagcctcgacgccttcctcttcagtacgcctcgccctcttcttcttcttctcctcctccttctcgccgcgccgccattgctgctgccacgtgggtacatggcgccggagttcgcgctggagggcgtctactcggcgtggaagctgtggacggaggggttggcggcggagttcatggacccggcgctggggcgggggtacgcggcggaggaggcgtggcggtgctaccacgtggggctcctgtgcgtgcaggaggacgcggacgcgcggcccaccatgtccaacgtcctcctcgccctcatcagcgaccacatgaacctccccgagccctcCaggccgcccatgttcaccaggctcCggagggcgctcctcctcgccccgccgctcatgaccaccaagaccgactccaccgcctcgccggtgtccgtcaacgacgtctccatcaccgtcatcgagccacgatga
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| Protein seq | MYDVAGERWSGGGGGHHRRLMGASSSSAPAPAGEDNAGKSGSSKDAMKIMVSVLVVVIFCTLLYCVYCWRWRKRNAVRRAQMERLRPMSSSDLPLMDLASIHAATDSFSKANKLGEGGFGPVYRGVLPGGGAEIAVKRLSARSRQGAAEFRNEVELIAKLQHRNLVRLLGWCAERDEKLLVYEFLPNGSLDAFLFSTPRPLLLLLLLLLAAPPLLLPRGYMAPEFALEGVYSAWKLWTEGLAAEFMDPALGRGYAAEEAWRCYHVGLLCVQEDADARPTMSNVLLALISDHMNLPEPSRPPMFTRLRRALLLAPPLMTTKTDSTASPVSVNDVSITVIEPR
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_06g0014200 | OsLima_06g0014200.02 | Chr06 | 13464608 | 13467448 | - | IsoSeq | ||
| CDS seq | atgttgtcgatggcttttctgaagctctcaagtctcaaccatcactgcaggcatttatctggtagtaggaggagagttagtgaagagatccacgaggaaaatgtaattaagtattatccttccacaagagggttaatt |
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| Protein seq | MLSMAFLKLSSLNHHCRHLSGSRRRVSEEIHEENVIKYYPSTRGLI |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A5 | Chr06 | 13465232 | 13465635 | - | OsLima_06g0014200.02 | OsLima_06g0014200.02,OsLima_06g0014200.01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.054628 | 0.000000 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0496800 | RBH | 0.419749 | 0.130881 | 4.769204 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g30130 | RBH | 0.254376 | 0.090537 | 1.236498 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0496800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0014170 | RBH | 0.0 | 8.573932 | 4.008179 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0013970 | RBH | 0.163494 | 4.580122 | 2.062120 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0014130 | RBH | 0.318017 | 2.986962 | 10.130152 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0014060 | RBH | 0.000000 | 0.119269 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0014150 | RBH | 0.436482 | 3.615803 | 19.135376 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0217500 | RBH | 8.7539565 | 13.179561 | 64.7173425 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0013650 | RBH | 0.052272 | 0.190966 | 1.073289 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0212100 | RBH | 13.985671 | 14.3730755 | 25.6922855 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0030700 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0014110 | RBH | 0.276155 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0013830 | RBH | 2.746556 | 4.779906 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0014420 | RBH | 0.475752 | 0.328764 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0013940 | RBH | 0.165733 | 3.784300 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G013810 | RBH | 0.000000 | 0.000000 | 3.629788 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0014130 | RBH | 0.266246 | 0.0 | 3.462233 |
