Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_06g0011750 | OGI:06029300 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr06:10442503-10456675 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | cacattctacatgcaaaatctgctgcttcagaataaggcaccccaaaattgggatgcccattctagttgtacagtacaatccaagaaccattgtttattgtttacaacatttctacatgagttttaacacataatcactattcctgcaaaataatgctaaacggatatgttacatgacctgtggccctctcaaggatacgtatacaatgaaattccagggcacaatgccatagctaattaagttggaaacaagttctagcatctagtaacattagaagcaaatcctattccactgctcttctatactaaacctgttgctattgcaaagaacattttctacatcacaactgtcaattccaaggtcaattaaatgagatatccacatccccatccgctgcccgtgaaatctgcatcctacgaagaataatcaaccgagaaagcaaagcctatgttgctttagctgtgcgttttttccagacactctgcacatttaacacaaacagtaaaagaactgtaacagtaagaatgaggaagactggtacaataggctcagagcacaggcgattttcttacaagagtctcgttgtcagattcctccttgctgtttaaattatggtcatcaggttcctcctcttttggctcatcacctttgccagacactttctcagcttttgctttcttggctactactacttctttctcattgtgtccatctgagataacagaacaattgtgctctcaacttccttgcaagaaacagcatgcagattatgggtaaacagtgaaccgtaaaatcaaccccaaattatcataccagactttttatcattatcagaatctgagtgtgcgagagaacttgatgaatccgaatcaatattcgcatcaccggcagcatcaacagaacttttaccccctatctttctgcgtttgtttttcggcagtccttttggtttgcctttcctctttgggggtgagggcctgcaaaataggggtaagaccaattgcaccaaggttttcaagtctaatcattttatatgggcttacctcttttttgacttctcttgttcaggcggcggagtttgcttgctgctggtaatgcttttatcctgagctctgcaagttcagattacatatcaaacaaactgatgatgtctatgacacacgtatcagtatgaaataattagaggtcttaaatatggaggagctagttcacgtggcataagacatcgtttgttcctcttggttacatgaggattctagaatcatcttattctatgataaaatgcaagatgtagtcaggagatagcactttttgtttagttgttgaactaattactgttcaggatgcctaattccccagtgctgtacaggacattttcccagatgctccagtgaagtttattatgcagtgcactatatgcaagaggaaaatccagcttaccgtccttggtttctccctgaatgatccttttttcgggcctgcaataatttgtaaacaacaataaacaaaaaaaaactatgacctaatttaaagagagtttttatgacacaatttaccatgctatacctttacaggcgggtcatcacttgcaacaatttcccatttttctttagctaggttaagcacttcaacatctccatcatcatatagcacctatgtagagaagcagtcttttaaatatatctggtatatggtgcattacaacttagaattatattccagtttgaactagaattataaatcatacaactgttgcatgttgtttatgtgctcatagtggttgacactactgtagcctgaaggatagcctggtggcatcggctgctagtgatgagaggactataagttgggggtgaagaacttgagggagagatttatagattgaaattcattgctcaattccactagaccagacaaattcctgaatgtctcttatatataggccagcacctaaccatccaatctaatagatagccaactactctaaataaatcatatctctaaggaaacctcctcctctacacgtgtctccccggccatgaccttatttggtccgactgtggaccgtggcccttggcctaatgcccatgacaatagtggctgagcaccaagcattctactatcttcatatagaattgacaaaatgaaaaggtgcaaagcaattcattgctttccatacttatatttgtgacaataaaatggatcaaatagatacaacatgtcgataatttaatgcaccatttgagggaacataccgtgtgtcttctttttgatgaatcaaaagattccacaacaccttcataaaatctggtaaagaaaaaagcaattaaaatctaggccatcttcagaaattagatagcacatgaagaataacacagatagagaactcacttcttatccaacggccaccaaacttttattctctttccaatcaggtccgcactgcctgtgtcatgtgttgtgcactgcaggcattaattggttcttagtaatgatgtttgaatgaaattttcactggagttgaacaaagtgaataccattggcacacatactttattctagtgattttaattgaaatattgcatgaaatttctcgacatgtcagcatttcttacagaacaaaagaaaacaatagagacaacctttgctagaccagaaaccaattttggcttctgccttttgatcgacccatttaaacttcccaaatcaacagttcgcttactactgcctgcctcatcagacttctgcaagagttcaacaaaaatcaatgaatccgaacctgattttcacctgtagatccaatagatacagccatacagatggaaagaaattacctttggactactactcaagatttcagcgtggggcttcttagcaccctttttccctttggatacaggggttttaacactagcaggcgatgttaccaactcagtatcaaccgagtcatctctttttttggccccctcaaccttattttcaaatgagttgatagtttcatctgggtcaacagactgcagtagaagctcatcactgtttttgttgcctttcgttgaatgtggtctactcttagaaactgatctcttgcgttttggtgttgaaaaatctacaggcttgtcattactctcttttgcatccatccgctttttctttggtttgctcttttctgattcccccaaattttcttgattgtccaagtttatttctctaaccagtcccaagacatcatcatctttttccatgtttattgaaccagattttgtcttctgctttctcccagccttttttgctccttgagattttaaaattttcacaatttttcctagaggaacttcattaccaaattcatcagtctcatctataagcatcttatccttgggagattcaacctggacggagagaaagatctaacgtcaaaggccagcagacaattgatgctgagacacagtatggacagaaaaataagcactatgtacctcagcagactttgctgtcataagagcctcaaaatgggccaacacattctcgcaacccggccatatctgctcatcactctcctacaaaatatcatataatgtcaaaataagaagcctagaagagaaaaggcaagaaagtgacacaaactgtaaagcaagtcttaaatgaatgggttgtttcatgctttgtcacaggcttaacaagcatatatgacataccacagaattttcattctgatccttctgaactggcgcataaagttgactgggcagtgaaactgtttgagcttctgatatatttatctgctcttgacataatttctttccaataaggataccaagatcacaaatagcatgcagtgtctgcaaacaacatacttcaaatctaagtcataccaaatagcaagcaagatgtattacagtagatcagcacaaatttaaaacaaatgaactcattaattaaaacattttcacaccttggtcttgttaacatcaaccacatcttgggaatatttgatacttttaaatatagatactattgttgtgaagctctcctttttcatgcctggtacactgtgctgcaaaccctcttcccccaggaggatcgaaagaagcagatgcaatcgcctggaaagagctttttgataagcatatatatgcaagtacagcaacaatttcagctacaagaatttacgagggtattgcattcgatttattattctcaaaattcaacaatcacagaacaaactagagtctgccaagagaccataatttaacagccataagtgtgattttgaattgagctaattgacattttttactggaataaagttgggctctaattgacttttctcataacaaatccatcccaaatgttatttgcacctttagggttagcaatctgatgtttcacacgcaaacttagaattgaaagtggaattagttacagcagcatacacttgtatgtacagtgtatttgagcagtgatcaagtggtactatgaagaaaaacgcaacgccattacaatgatatcgttgaagaaataaagtcatctgatctctttcagaagaaagcagataattgaccaatgatttaaaagtctcatatttccatgagttgagggcatcaattaaataacattactagagttgcttctacccccaagtgattataaccctgagtgattataaagcatgatttaatgatggacggaaattagttctctataagttacatgggtaaaaaattcaatagacagattaaaacagaggcactatgtgaatgaactggtcattatgtttggagcttaaagtattcttttcctccaagcatgaccgtggctattctttttaatagatcagcaaggagaagggtcccaaagtcaatatgttgggaagagtctcataagttgttgagtagcagggtagtgttggtgccaaggcttgtgtattgatgtggttttgcttgggtgagtgttatgttgccccttttcttcgtttgttctcttggatgggtatagtgtgactaattctattttcctctcaaggatgaataaacagagccccagccatctgttcccaaagaaagaaaagaacaagcaaactaatggtaaattggtaataagcattagaaaaaaaaactttgagccattattagataccagtaaattggaccaaatgcttcaacatcctcatgctcttcaatgttaggacatgatggatcatgagagagggcatgaaccaaataggaaatcatatattctggataagcagtgagcacatttgtttccgcttggacagaaagttggcgcatcttaacttgctggcatatctgcgcaacctcaattatgttgtgcttaaactgagaagggaaagaaaacaaaagaattaaagaaacatattagaatgagtacagtggtggaaatcaattaatttttcgagtttagagtatgaacctcttcatactgtggggcatgataatcatccatagctaacaagaaagcacaagcatattttgcatccaaggccctttccttaatatattgatgtactttactaagaaataatttcctcacctgaggaacatcatcctggtaataaaagaaaccataaatctccaaagaagatacaagtgaatcatgtgaaaggaacagtaagagtatgctaagctgtattatgcacaacgcatacctgtgaaatcctgagagtcaaatagaatacatcaacaggcactttgtggtcccattgtcttgataagcggagaacagcttttgctgccgccagcctcaaatgggccttatcaatagtgctgcaagtaatggagtagtgagaaataaccaaacacacagacaaagagagagagaagaatggcacattaaaaagcatatctgttggtagtttgctaccttgaaatcatatttgcagaaatatcaccatatgtaaggatattcttaaggatgcccattaatttgtcaattcccggatgtgcttgagcatctttgcaaggttgacagctcttcaccaaagttttaatgccataaatctaggaagaaaatacaaaacaacatgtagaggtcaattaactttgatggatggattgaagtgagacctataaaaccataatttcactaaccttcaataaacaactttgagtactatcactccattcagatttatgagcagaaacgtcgcccgaatcctggtgatgcactccgaattgcaataaaaatggaaataaaatggagaaggaaaggagaaatttaaagagcgtaagtcttacatcattgcagtcaagaatttttttagttataaaatttattatctcttctccccttgtttcaaaaattggcattgctatctgagctatacaccccaaggattgtaagatggatggcaaatgcactttcttttcctccaacaagtccacaagcctctgcaaggttacgaatgtagagcataacatgttagaaatctcaaatatatgatccaagaagaaacagctaacaacaaatttgaaccttgtaaagaacagatagagacatcaggccatcatcttttgttatagcagccaaagcatgaacagagtattttgcctgcttccgtgttccttccaaacatagccgctctagtagaagagtaatggaactgaaacagaaggcacagcatcttagttctatactcttatatccttattaagtagtgaaaagaataatgtctcattcatttcacaaaagttgcaccttgatgaagctagttgttcacgaatgttgccaccagccttcgacagaacatgagcaataccctctttaagtagttcattatcctccttcaggagctcaatgatatcttcttcaagtccagacaaaagtgaagggaagaaactagatactgcctgcaatgtgtaaaacaagaagtaatgggaactgtcctgctgaagcatgataaagcaaatacacataagggatatagaagagataaacttgctcaggaagaaaaatatcgggcattcataaacataagtaatctagtaacggttacttgctagctagcctgacaatggtctttcaacagcaatgctccttgctagctagcctaacaatggaattaccacacaaccccacgcaggcaactcctgaactagttgttgcatgcttccttcatggcaggaaaggatgaccaaaacgtttcaacaaatcataccgttaaaagatccatgcatgatgacataagttttgtattcccagtagatttttggtcagaagcttcagaaaggatctctttgacatattccttgttcacaagtaaatatgagcatctcatcgacaacgtgctcacaaaatcatgtaatgcatgtttttcaccaagtttcgttagcaaatcaacctgcagattacaaataatattcaaatatagcagcatacaagtaaatcaaattaggtaactgaaaagcaataaaaaaagtcaagtatacaccctttttttcatatgaagagttcatattggtcaagaataatgcagaaaatacaataaaataactattatagaggcaactatacctgactacatgcagcactggatgagataaatggaaccacaaagaagaaaagctagtgttgcaaacaagctaaaagaattctttttcttaacatatactgctcttttttctatttcatattgcaagccaaacaaaataatcatctgtaatctgtaaatcaaatggagtagcaggtacccgaagagaccaagcttcgttgaatgttgttgaacaatcaagcaagcttgtgaatatattccagatgttggcatcttttatctgatgaagcatgttcaagtactcctcagactttgtatgatcattgaacaaacgagacatgctccggaaacaccccaggatcttttttttcatatcaggggtatcttcctgcttgcaaaaggaactgataagatagtgatagaacagacagtaattctgtagtgcatttgactattcaagattcaccaacctggcttgtctgtcgaagggacatgtacttcagcatttcttgttgtagcctgaaattgaagaagcaacaatatatcagagagagagacaatttatcaaactaaacgatctctagaaagtaaaaatagtgccagacctctgtttttgcagaaaaatttgctcgagagctttcatctcaactttgtcgaaatttgtgacagcagttacccaatgtttcactctttcctttgttggatactctggtgggaacaatgaaccacataaaattgattcaattgactctggtctgcatcaaataaatcaaacaaatcaatggacatcacctaaccacaatatcttgccacagaaaaaaaaggtgatgttatggaattcttgtctgatgtgttggtgaaagagcaatgtgaaatgctattaagaaaatatcatggaaagagtaccataggaagcatgaaacattatagatggagtagtacatagagcatatcttagaggtaagcaaagaacagcaagatatcttgcatgtacaatggggattgaggaagcatgacatctgatcataaatattgagcagtttacaggtttgtatataaagcataatacaaatcgccacaaggatattaagtacccttacctaaaatctttgtcatagaggcatcttaatatttttccaggaatccactcaaaatcatcagaatttactgagctatcagaaccactctggcaatagaacttgtagatgtcagccaatctctccatggtatagcacttcacagaaacctgatttttttaaaaaaacaattatacaccatgcattcaagtgaatcgtacagattatattcatcaaacataaatattgaaagatgcagcaaggggcaaacagaactaactgatttatcacggacacgctccgcaacttgtttgatagtttcaactgggactgcaccaagtgaatggcaagctacatcacaaatagcagctaccacttgctttctcacattttcctcataatccaacaatctgtcacaaagtgcctctgccaaggagacaaccatcagtacaagcacaaatgatggcacattcagattatattctcagctattcagcaaatagctacttactgataatctcttgagcttcaggacgggaatggtttgacatcagacattttttcaaatgctcaattacagaaacacgaatttctacagctcggtcagtcaatctcttcaggaactcatcgaaaagagatttaaatgattccaagatagggattccaggtaaagagaaaagttcgccaagtatttcaactgctttagaccgagtttcaacttcatctgcctagaaaatgccaattacaaactctaattaacaaagacaaaccaaaatttggtcacttaaattaagatatatggatttttttttccggaagatggaagattattttctgttccccaggcaataattatttcatattgcacagtattgctttaagtatataagtaaggttctacataccagcagttccccagttatataaggtaccaccactttaagaacctttggagcacactggtacaaatcaaatatgacttcgtgatggtcaatgctattattggtagaagtaccatccccatccaaggatgatgtcagaatcttccttatgtatggttcaagttttcctgcagagtgctctataacatggcgagcaagcttgcgtgcaggcaaagaaacaccctagagattaaaaaaaaaattgcacattaagacttattgaaggaataaataaaggaaaaggacaaaataatagagaagcagtttctctaacaaatcacagaataggtccaaaaaaagctttaaaaatggaaggcactcacagtttttttccggcctaaagttgatagaagtacattgagaaggctttcctctatatcctcgctttcatctataattagggccattactgattgcattgaatttacaatatttggctcatgattgtcactgcatcaattcaaaacacaatgagtaaaatatttaagctatcaactagcagcaatattgcgtgtatgtcacttggtagcattaatagtcttatagtcaataatttctggttgtgtgcttctgatttagtacaatagaatgaaatattttacatgtcaaataacttggctccatgaaacagcatactataactacactcgtgatggaatgaggagagatggttgatgcggtgttctaagttgaggttgttagcatatatgggcttcctaaactgcaagagttcaaggaaattaatgtttaaaacatatagagcagcaccccatatatcaaaactgcatgttaacctgcatgagtgtaaatgtgggcatccactcattaacttctctttggaaattgaagggtcgatagctgtatcatgacttctcaaaaaatgccttaatactgatcaaataggtatgtcattcaaatgccagtaaatatggtcctctagatttgaatttacaaacaagtcctttacgcagtgcatatattgaaaatgagtaagtacacatcttagtcctcaaacagaagttaaaacagcacttcgtgaactcatacttgaattctattgaacatttttttaaaaataattagaaacaagcatgataaaataagtcatgtgcaacaatgaacaaaatgtggaaactagtccatgtgcggtgaagtatataaaaccaacaacattacatccaaatggatacagaagtattacctgataatttctaaaaaagatcggaacatgtctgcaattagatcattgcattcaaggtctaacatgacaacacatgctcggtatctcgcaactgtttccagaatagcaactctcctgccaaaggatttaccattaacatcattgagtccactaaatgtatccacaatcagatgaaacatgtcctgcaaatgaaattaacaataatcttcaaatgttgaataaatatagtaaactgagtcaaatataattagtatattgctttctggaaggatgcttgatgataaatgataataatacccttaagacatcatcactgtatggagcttcaggagcagttattcttgtaatttcacagaagcatgttgccaatagtactttgacatcttcatcgtggtgtttcaagaattcatctctggcaacagcctttagacatggttggatagtttccatcactgagggacctggtgactgctctactccatgtaggcattctgcagcttgctgcagtacgatcagcattaatagcatatccagagcttacttaagcaaggaggaagcatttcaagcatacagttagtattgctacagatgcaagccagtcaggctgtccaaccaattgaccatattaattcttttgtttgacaaattagtatacacagtcaggcatgtatacaacaaaaatgatatcctttaaatgtcaagtgaaccatcaatgagttggaccaattaataggcaatcaaatatagtcggtactgtactactgctattactccctatgacccgttctaggaacagtactacatagcagataaccatattcttaagaatcaactttcttcagtcattaataccaacaaaatttcagtgccccttataaaaaaaagtgtattttttagatttttaaccaagcttaaagcctatctgcttcagctaaacaaaccaaaatggctgattactaagggggaagtttcacatgcaaactacttgtttctggagtacaatagttgcagtcgaatgaatccaggtaacagtgtaacacctaagcaagttcaaaagatatgatccctcctaactatttcaaatcgggtgctagctgaaaggttccataccaaggcaaagagaacaaggaaagaacaatgacctgattcactctaaacaatagcagaaccacagtaaacacaagagcaattcagatgaactggcattgcggattccaaacctaaaaataggtgtgcctaaacctaccaaaatggcctagttaatatataggtgtcaatcaaatcacccaagtgcatttccacaagtatcattactgcctaaaaatttcatttacagataaagtagctgatgatccttcaataaagatagtggctgtctctaactgcaaactcgataatccgatctacatcacaatatccaatagcatagagttattggcaccagcacatacaatacattggtcaaaaatttaaactagggtacaatgttggccaactgccatttttcctagctgattagctataaacaaaagaacaaaacagaagtaatctaagagcatacagttagaaaagcactcaatgttacccccacaacagacaagtgtcgggatacaaagagtccaccagtttcagattttgggatctaaaaagtaggattcgaatgagaacctaccaagtaactttattctaagaacattgctgagaaataataccatgtgaccatagaaatcaatgtactgctagccgacaaaattgccatataaacattatcataggtctagaagtgctttttgcatttccgcttaactactgaacaccaatccactacaatgttaagctttaatatactaagatcccaaaaccctaacgataagcgattaagcacacaaaacaagccaaaaatacacatgggtcccaccactgcacaattgagcacccaaaaccttaacatagttaaagttcactatgttcttagtccctatagaaaatctaatcagccaaaagaagcaaagagacacctagaaggaaatcactaattacaacagaaacacagcttccgaaccattaactccgaattacccaacgcattttttattttgggaagcccacaactatcattcaagctaaaccatcaactccagcagcaaaaccctaatttgaaaaacacctaccttctaacatcttgtaccttaaattggctgaataagcaagattcattatattaactcaaatgagctggtgtctgaatagttcagaccataaaattttttgacaagataaacaaattaaatttattctaaaaaaattatctataaaattatgaagacagaaatgtggtatcaacaggacataaaatacttatagatatgaaggcaaaactctaatatgtaatatgtcctaggtctataagtttccacatgaacatgaaattaatttacttaaaagtcagctcactgaccaaaaatcagatttttctcttcttcagtacaaaatgtcaatccaccacagaaccaacctacaaaagtgaagaacttgcaatagtaaaaccgcaacagcacgccacgaaactagcgtctttcaccactaaaaccccataaaccctaatctggcacgacaaaactgaacctccctaatccagcacgacaaaaagctccaaatcgcagcattgcaattcatcacccaaaacctctaacacgccaagctccagcagaaaatgccttgcctcccgagtagtcccaccaaacacagaacgggaacaatactacaagcaaaacgcaccacgtacaccgccaattccagcagaaacgcggcctcccaaatctcacccataaaaacaaaccttcgtctcctaattacccggcacctgcacataaaccgtgccttggacaccctcccgagtcccaaacagctaatttcaagctaaagcaaccaaattccatcaccaaaaaccctaattcgaacccaaaaccccaccacaatcccccaccgccctaaaccctaaacctgccgaattcgcccacagatccacccaaaccccgcaacctcacacccccctcccctcctccacaacgccaaagcaaaagcaaccaaccaacccaacccaagcaccgaacctcccaaagagcagtaacaagtcctcacctcgagcagcttggcgaggtcgtcggccgggtccggcggcgccgcctccagcttctccccgagctccttcagctgctcctccgctgcccccatccccgggccagatcggccgccaattcacgcacctccctctctctctctctctccctctctctctctctctcgctggggtttctaatctgagaggaggaggagcgccttgtctttttggctctcgctgtttcgaaaattggtgaggaggagagaggcggagagctcgtgagcggaatgccccagttcgggatcgggtttgggtctctctctctc
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| CDS seq | atgggggcagcggaggagcagctgaaggagctcggggagaagctggaggcggcgccgccggacccggccgacgacctcgccaagctgctcgagcaagctgcagaatgcctacatggagtagagcagtcaccaggtccctcagtgatggaaactatccaaccatgtctaaaggctgttgccagagatgaattcttgaaacaccacgatgaagatgtcaaagtactattggcaacatgcttctgtgaaattacaagaataactgctcctgaagctccatacagtgatgatgtcttaagggacatgtttcatctgattgtggatacatttagtggactcaatgatgttaatggtaaatcctttggcaggagagttgctattctggaaacagttgcgagataccgagcatgtgttgtcatgttagaccttgaatgcaatgatctaattgcagacatgttccgatcttttttagaaattatcagtgacaatcatgagccaaatattgtaaattcaatgcaatcagtaatggccctaattatagatgaaagcgaggatatagaggaaagccttctcaatgtacttctatcaactttaggccggaaaaaaactggtgtttctttgcctgcacgcaagcttgctcgccatgttatagagcactctgcaggaaaacttgaaccatacataaggaagattctgacatcatccttggatggggatggtacttctaccaataatagcattgaccatcacgaagtcatatttgatttgtaccagtgtgctccaaaggttcttaaagtggtggtaccttatataactggggaactgctggcagatgaagttgaaactcggtctaaagcagttgaaatacttggcgaacttttctctttacctggaatccctatcttggaatcatttaaatctcttttcgatgagttcctgaagagattgactgaccgagctgtagaaattcgtgtttctgtaattgagcatttgaaaaaatgtctgatgtcaaaccattcccgtcctgaagctcaagagattatcaaggcactttgtgacagattgttggattatgaggaaaatgtgagaaagcaagtggtagctgctatttgtgatgtagcttgccattcacttggtgcagtcccagttgaaactatcaaacaagttgcggagcgtgtccgtgataaatcagtttctgtgaagtgctataccatggagagattggctgacatctacaagttctattgccagagtggttctgatagctcagtaaattctgatgattttgagtggattcctggaaaaatattaagatgcctctatgacaaagattttagaccagagtcaattgaatcaattttatgtggttcattgttcccaccagagtatccaacaaaggaaagagtgaaacattgggtaactgctgtcacaaatttcgacaaagttgagatgaaagctctcgagcaaatttttctgcaaaaacagaggctacaacaagaaatgctgaagtacatgtcccttcgacagacaagccaggaagatacccctgatatgaaaaaaaagatcctggggtgtttccggagcatgtctcgtttgttcaatgatcatacaaagtctgaggagtacttgaacatgcttcatcagataaaagatgccaacatctggaatatattcacaagcttgcttgattgttcaacaacattcaacgaagcttggtctcttcgggttgatttgctaacgaaacttggtgaaaaacatgcattacatgattttgtgagcacgttgtcgatgagatgctcatatttacttgtgaacaaggaatatgtcaaagagatcctttctgaagcttctgaccaaaaatctactgggaatacaaaacttatgtcatcatgcatggatcttttaacggcagtatctagtttcttcccttcacttttgtctggacttgaagaagatatcattgagctcctgaaggaggataatgaactacttaaagagggtattgctcatgttctgtcgaaggctggtggcaacattcgtgaacaactagcttcatcaagttccattactcttctactagagcggctatgtttggaaggaacacggaagcaggcaaaatactctgttcatgctttggctgctataacaaaagatgatggcctgatgtctctatctgttctttacaagaggcttgtggacttgttggaggaaaagaaagtgcatttgccatccatcttacaatccttggggtgtatagctcagatagcaatgccaatttttgaaacaaggggagaagagataataaattttataactaaaaaaattcttgactgcaatgatgattcgggcgacgtttctgctcataaatctgaatggagtgatagtactcaaagttgtttattgaagatttatggcattaaaactttggtgaagagctgtcaaccttgcaaagatgctcaagcacatccgggaattgacaaattaatgggcatccttaagaatatccttacatatggtgatatttctgcaaatatgatttcaagcactattgataaggcccatttgaggctggcggcagcaaaagctgttctccgcttatcaagacaatgggaccacaaagtgcctgttgatgtattctatttgactctcaggatttcacaggatgatgttcctcaggtgaggaaattatttcttagtaaagtacatcaatatattaaggaaagggccttggatgcaaaatatgcttgtgctttcttgttagctatggatgattatcatgccccacagtatgaagagtttaagcacaacataattgaggttgcgcagatatgccagcaagttaagatgcgccaactttctgtccaagcggaaacaaatgtgctcactgcttatccagaatatatgatttcctatttggttcatgccctctctcatgatccatcatgtcctaacattgaagagcatgaggatgttgaagcatttggtccaatttactggcgattgcatctgcttctttcgatcctcctgggggaagagggtttgcagcacagtgtaccaggcatgaaaaaggagagcttcacaacaatagtatctatatttaaaagtatcaaatattcccaagatgtggttgatgttaacaagaccaagacactgcatgctatttgtgatcttggtatccttattggaaagaaattatgtcaagagcagataaatatatcagaagctcaaacagtttcactgcccagtcaactttatgcgccagttcagaaggatcagaatgaaaattctgtggagagtgatgagcagatatggccgggttgcgagaatgtgttggcccattttgaggctcttatgacagcaaagtctgctgaggttgaatctcccaaggataagatgcttatagatgagactgatgaatttggtaatgaagttcctctaggaaaaattgtgaaaattttaaaatctcaaggagcaaaaaaggctgggagaaagcagaagacaaaatctggttcaataaacatggaaaaagatgatgatgtcttgggactggttagagaaataaacttggacaatcaagaaaatttgggggaatcagaaaagagcaaaccaaagaaaaagcggatggatgcaaaagagagtaatgacaagcctgtagatttttcaacaccaaaacgcaagagatcagtttctaagagtagaccacattcaacgaaaggcaacaaaaacagtgatgagcttctactgcagtctgttgacccagatgaaactatcaactcatttgaaaataaggttgagggggccaaaaaaagagatgactcggttgatactgagttggtaacatcgcctgctagtgttaaaacccctgtatccaaagggaaaaagggtgctaagaagccccacgctgaaatcttgagtagtagtccaaagaagtctgatgaggcaggcagtagtaagcgaactgttgatttgggaagtttaaatgggtcgatcaaaaggcagaagccaaaattggtttctggtctagcaaagtgcacaacacatgacacaggcagtgcggacctgattggaaagagaataaaagtttggtggccgttggataagaaattttatgaaggtgttgtggaatcttttgattcatcaaaaagaagacacacggtgctatatgatgatggagatgttgaagtgcttaacctagctaaagaaaaatgggaaattgttgcaagtgatgacccgcctgtaaaggcccgaaaaaaggatcattcagggagaaaccaaggacgagctcaggataaaagcattaccagcagcaagcaaactccgccgcctgaacaagagaagtcaaaaaagaggccctcacccccaaagaggaaaggcaaaccaaaaggactgccgaaaaacaaacgcagaaagatagggggtaaaagttctgttgatgctgccggtgatgcgaatattgattcggattcatcaagttctctcgcacactcagattctgataatgataaaaagtctgatggacacaatgagaaagaagtagtagtagccaagaaagcaaaagctgagaaagtgtctggcaaaggtgatgagccaaaagaggaggaacctgatgaccataatttaaacagcaaggaggaatctgacaacgagactcttagtgtctggaaaaaacgcacagctaaagcaacatag
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| Protein seq | MGAAEEQLKELGEKLEAAPPDPADDLAKLLEQAAECLHGVEQSPGPSVMETIQPCLKAVARDEFLKHHDEDVKVLLATCFCEITRITAPEAPYSDDVLRDMFHLIVDTFSGLNDVNGKSFGRRVAILETVARYRACVVMLDLECNDLIADMFRSFLEIISDNHEPNIVNSMQSVMALIIDESEDIEESLLNVLLSTLGRKKTGVSLPARKLARHVIEHSAGKLEPYIRKILTSSLDGDGTSTNNSIDHHEVIFDLYQCAPKVLKVVVPYITGELLADEVETRSKAVEILGELFSLPGIPILESFKSLFDEFLKRLTDRAVEIRVSVIEHLKKCLMSNHSRPEAQEIIKALCDRLLDYEENVRKQVVAAICDVACHSLGAVPVETIKQVAERVRDKSVSVKCYTMERLADIYKFYCQSGSDSSVNSDDFEWIPGKILRCLYDKDFRPESIESILCGSLFPPEYPTKERVKHWVTAVTNFDKVEMKALEQIFLQKQRLQQEMLKYMSLRQTSQEDTPDMKKKILGCFRSMSRLFNDHTKSEEYLNMLHQIKDANIWNIFTSLLDCSTTFNEAWSLRVDLLTKLGEKHALHDFVSTLSMRCSYLLVNKEYVKEILSEASDQKSTGNTKLMSSCMDLLTAVSSFFPSLLSGLEEDIIELLKEDNELLKEGIAHVLSKAGGNIREQLASSSSITLLLERLCLEGTRKQAKYSVHALAAITKDDGLMSLSVLYKRLVDLLEEKKVHLPSILQSLGCIAQIAMPIFETRGEEIINFITKKILDCNDDSGDVSAHKSEWSDSTQSCLLKIYGIKTLVKSCQPCKDAQAHPGIDKLMGILKNILTYGDISANMISSTIDKAHLRLAAAKAVLRLSRQWDHKVPVDVFYLTLRISQDDVPQVRKLFLSKVHQYIKERALDAKYACAFLLAMDDYHAPQYEEFKHNIIEVAQICQQVKMRQLSVQAETNVLTAYPEYMISYLVHALSHDPSCPNIEEHEDVEAFGPIYWRLHLLLSILLGEEGLQHSVPGMKKESFTTIVSIFKSIKYSQDVVDVNKTKTLHAICDLGILIGKKLCQEQINISEAQTVSLPSQLYAPVQKDQNENSVESDEQIWPGCENVLAHFEALMTAKSAEVESPKDKMLIDETDEFGNEVPLGKIVKILKSQGAKKAGRKQKTKSGSINMEKDDDVLGLVREINLDNQENLGESEKSKPKKKRMDAKESNDKPVDFSTPKRKRSVSKSRPHSTKGNKNSDELLLQSVDPDETINSFENKVEGAKKRDDSVDTELVTSPASVKTPVSKGKKGAKKPHAEILSSSPKKSDEAGSSKRTVDLGSLNGSIKRQKPKLVSGLAKCTTHDTGSADLIGKRIKVWWPLDKKFYEGVVESFDSSKRRHTVLYDDGDVEVLNLAKEKWEIVASDDPPVKARKKDHSGRNQGRAQDKSITSSKQTPPPEQEKSKKRPSPPKRKGKPKGLPKNKRRKIGGKSSVDAAGDANIDSDSSSSLAHSDSDNDKKSDGHNEKEVVVAKKAKAEKVSGKGDEPKEEEPDDHNLNSKEESDNETLSVWKKRTAKAT |
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| Function | Sister chromatid cohesion protein PDS5 homolog B-B [UniProtKB/Swiss-Prot:Q5U241] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_06g0011750 | OsLima_06g0011750.01 | Chr06 | 10442503 | 10456675 | - | NAM | ||
| CDS seq | atgggggcagcggaggagcagctgaaggagctcggggagaagctggaggcggcgccgccggacccggccgacgacctcgccaagctgctcgagcaagctgcagaatgcctacatggagtagagcagtcaccaggtccctcagtgatggaaactatccaaccatgtctaaaggctgttgccagagatgaattcttgaaacaccacgatgaagatgtcaaagtactattggcaacatgcttctgtgaaattacaagaataactgctcctgaagctccatacagtgatgatgtcttaagggacatgtttcatctgattgtggatacatttagtggactcaatgatgttaatggtaaatcctttggcaggagagttgctattctggaaacagttgcgagataccgagcatgtgttgtcatgttagaccttgaatgcaatgatctaattgcagacatgttccgatcttttttagaaattatcagtgacaatcatgagccaaatattgtaaattcaatgcaatcagtaatggccctaattatagatgaaagcgaggatatagaggaaagccttctcaatgtacttctatcaactttaggccggaaaaaaactggtgtttctttgcctgcacgcaagcttgctcgccatgttatagagcactctgcaggaaaacttgaaccatacataaggaagattctgacatcatccttggatggggatggtacttctaccaataatagcattgaccatcacgaagtcatatttgatttgtaccagtgtgctccaaaggttcttaaagtggtggtaccttatataactggggaactgctggcagatgaagttgaaactcggtctaaagcagttgaaatacttggcgaacttttctctttacctggaatccctatcttggaatcatttaaatctcttttcgatgagttcctgaagagattgactgaccgagctgtagaaattcgtgtttctgtaattgagcatttgaaaaaatgtctgatgtcaaaccattcccgtcctgaagctcaagagattatcaaggcactttgtgacagattgttggattatgaggaaaatgtgagaaagcaagtggtagctgctatttgtgatgtagcttgccattcacttggtgcagtcccagttgaaactatcaaacaagttgcggagcgtgtccgtgataaatcagtttctgtgaagtgctataccatggagagattggctgacatctacaagttctattgccagagtggttctgatagctcagtaaattctgatgattttgagtggattcctggaaaaatattaagatgcctctatgacaaagattttagaccagagtcaattgaatcaattttatgtggttcattgttcccaccagagtatccaacaaaggaaagagtgaaacattgggtaactgctgtcacaaatttcgacaaagttgagatgaaagctctcgagcaaatttttctgcaaaaacagaggctacaacaagaaatgctgaagtacatgtcccttcgacagacaagccaggaagatacccctgatatgaaaaaaaagatcctggggtgtttccggagcatgtctcgtttgttcaatgatcatacaaagtctgaggagtacttgaacatgcttcatcagataaaagatgccaacatctggaatatattcacaagcttgcttgattgttcaacaacattcaacgaagcttggtctcttcgggttgatttgctaacgaaacttggtgaaaaacatgcattacatgattttgtgagcacgttgtcgatgagatgctcatatttacttgtgaacaaggaatatgtcaaagagatcctttctgaagcttctgaccaaaaatctactgggaatacaaaacttatgtcatcatgcatggatcttttaacggcagtatctagtttcttcccttcacttttgtctggacttgaagaagatatcattgagctcctgaaggaggataatgaactacttaaagagggtattgctcatgttctgtcgaaggctggtggcaacattcgtgaacaactagcttcatcaagttccattactcttctactagagcggctatgtttggaaggaacacggaagcaggcaaaatactctgttcatgctttggctgctataacaaaagatgatggcctgatgtctctatctgttctttacaagaggcttgtggacttgttggaggaaaagaaagtgcatttgccatccatcttacaatccttggggtgtatagctcagatagcaatgccaatttttgaaacaaggggagaagagataataaattttataactaaaaaaattcttgactgcaatgatgattcgggcgacgtttctgctcataaatctgaatggagtgatagtactcaaagttgtttattgaagatttatggcattaaaactttggtgaagagctgtcaaccttgcaaagatgctcaagcacatccgggaattgacaaattaatgggcatccttaagaatatccttacatatggtgatatttctgcaaatatgatttcaagcactattgataaggcccatttgaggctggcggcagcaaaagctgttctccgcttatcaagacaatgggaccacaaagtgcctgttgatgtattctatttgactctcaggatttcacaggatgatgttcctcaggtgaggaaattatttcttagtaaagtacatcaatatattaaggaaagggccttggatgcaaaatatgcttgtgctttcttgttagctatggatgattatcatgccccacagtatgaagagtttaagcacaacataattgaggttgcgcagatatgccagcaagttaagatgcgccaactttctgtccaagcggaaacaaatgtgctcactgcttatccagaatatatgatttcctatttggttcatgccctctctcatgatccatcatgtcctaacattgaagagcatgaggatgttgaagcatttggtccaatttactggcgattgcatctgcttctttcgatcctcctgggggaagagggtttgcagcacagtgtaccaggcatgaaaaaggagagcttcacaacaatagtatctatatttaaaagtatcaaatattcccaagatgtggttgatgttaacaagaccaagacactgcatgctatttgtgatcttggtatccttattggaaagaaattatgtcaagagcagataaatatatcagaagctcaaacagtttcactgcccagtcaactttatgcgccagttcagaaggatcagaatgaaaattctgtggagagtgatgagcagatatggccgggttgcgagaatgtgttggcccattttgaggctcttatgacagcaaagtctgctgaggttgaatctcccaaggataagatgcttatagatgagactgatgaatttggtaatgaagttcctctaggaaaaattgtgaaaattttaaaatctcaaggagcaaaaaaggctgggagaaagcagaagacaaaatctggttcaataaacatggaaaaagatgatgatgtcttgggactggttagagaaataaacttggacaatcaagaaaatttgggggaatcagaaaagagcaaaccaaagaaaaagcggatggatgcaaaagagagtaatgacaagcctgtagatttttcaacaccaaaacgcaagagatcagtttctaagagtagaccacattcaacgaaaggcaacaaaaacagtgatgagcttctactgcagtctgttgacccagatgaaactatcaactcatttgaaaataaggttgagggggccaaaaaaagagatgactcggttgatactgagttggtaacatcgcctgctagtgttaaaacccctgtatccaaagggaaaaagggtgctaagaagccccacgctgaaatcttgagtagtagtccaaagaagtctgatgaggcaggcagtagtaagcgaactgttgatttgggaagtttaaatgggtcgatcaaaaggcagaagccaaaattggtttctggtctagcaaagtgcacaacacatgacacaggcagtgcggacctgattggaaagagaataaaagtttggtggccgttggataagaaattttatgaaggtgttgtggaatcttttgattcatcaaaaagaagacacacggtgctatatgatgatggagatgttgaagtgcttaacctagctaaagaaaaatgggaaattgttgcaagtgatgacccgcctgtaaaggcccgaaaaaaggatcattcagggagaaaccaaggacgagctcaggataaaagcattaccagcagcaagcaaactccgccgcctgaacaagagaagtcaaaaaagaggccctcacccccaaagaggaaaggcaaaccaaaaggactgccgaaaaacaaacgcagaaagatagggggtaaaagttctgttgatgctgccggtgatgcgaatattgattcggattcatcaagttctctcgcacactcagattctgataatgataaaaagtctgatggacacaatgagaaagaagtagtagtagccaagaaagcaaaagctgagaaagtgtctggcaaaggtgatgagccaaaagaggaggaacctgatgaccataatttaaacagcaaggaggaatctgacaacgagactcttagtgtctggaaaaaacgcacagctaaagcaacatag
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| Protein seq | MGAAEEQLKELGEKLEAAPPDPADDLAKLLEQAAECLHGVEQSPGPSVMETIQPCLKAVARDEFLKHHDEDVKVLLATCFCEITRITAPEAPYSDDVLRDMFHLIVDTFSGLNDVNGKSFGRRVAILETVARYRACVVMLDLECNDLIADMFRSFLEIISDNHEPNIVNSMQSVMALIIDESEDIEESLLNVLLSTLGRKKTGVSLPARKLARHVIEHSAGKLEPYIRKILTSSLDGDGTSTNNSIDHHEVIFDLYQCAPKVLKVVVPYITGELLADEVETRSKAVEILGELFSLPGIPILESFKSLFDEFLKRLTDRAVEIRVSVIEHLKKCLMSNHSRPEAQEIIKALCDRLLDYEENVRKQVVAAICDVACHSLGAVPVETIKQVAERVRDKSVSVKCYTMERLADIYKFYCQSGSDSSVNSDDFEWIPGKILRCLYDKDFRPESIESILCGSLFPPEYPTKERVKHWVTAVTNFDKVEMKALEQIFLQKQRLQQEMLKYMSLRQTSQEDTPDMKKKILGCFRSMSRLFNDHTKSEEYLNMLHQIKDANIWNIFTSLLDCSTTFNEAWSLRVDLLTKLGEKHALHDFVSTLSMRCSYLLVNKEYVKEILSEASDQKSTGNTKLMSSCMDLLTAVSSFFPSLLSGLEEDIIELLKEDNELLKEGIAHVLSKAGGNIREQLASSSSITLLLERLCLEGTRKQAKYSVHALAAITKDDGLMSLSVLYKRLVDLLEEKKVHLPSILQSLGCIAQIAMPIFETRGEEIINFITKKILDCNDDSGDVSAHKSEWSDSTQSCLLKIYGIKTLVKSCQPCKDAQAHPGIDKLMGILKNILTYGDISANMISSTIDKAHLRLAAAKAVLRLSRQWDHKVPVDVFYLTLRISQDDVPQVRKLFLSKVHQYIKERALDAKYACAFLLAMDDYHAPQYEEFKHNIIEVAQICQQVKMRQLSVQAETNVLTAYPEYMISYLVHALSHDPSCPNIEEHEDVEAFGPIYWRLHLLLSILLGEEGLQHSVPGMKKESFTTIVSIFKSIKYSQDVVDVNKTKTLHAICDLGILIGKKLCQEQINISEAQTVSLPSQLYAPVQKDQNENSVESDEQIWPGCENVLAHFEALMTAKSAEVESPKDKMLIDETDEFGNEVPLGKIVKILKSQGAKKAGRKQKTKSGSINMEKDDDVLGLVREINLDNQENLGESEKSKPKKKRMDAKESNDKPVDFSTPKRKRSVSKSRPHSTKGNKNSDELLLQSVDPDETINSFENKVEGAKKRDDSVDTELVTSPASVKTPVSKGKKGAKKPHAEILSSSPKKSDEAGSSKRTVDLGSLNGSIKRQKPKLVSGLAKCTTHDTGSADLIGKRIKVWWPLDKKFYEGVVESFDSSKRRHTVLYDDGDVEVLNLAKEKWEIVASDDPPVKARKKDHSGRNQGRAQDKSITSSKQTPPPEQEKSKKRPSPPKRKGKPKGLPKNKRRKIGGKSSVDAAGDANIDSDSSSSLAHSDSDNDKKSDGHNEKEVVVAKKAKAEKVSGKGDEPKEEEPDDHNLNSKEESDNETLSVWKKRTAKAT
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.851178 | 0.689749 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0286351 | RBH | 9.946183 | 7.472437 | 13.218154 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g17840 | RBH | 6.230493 | 4.366815 | 3.059641 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0286351 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0011730 | RBH | 2.604276 | 23.132193 | 13.316843 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0011630 | RBH | 0.678229 | 5.876724 | 7.082218 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0011640 | RBH | 6.557114 | 18.980324 | 29.468700 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0011660 | RBH | 0.751339 | 0.563495 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0011760 | RBH | 21.508759 | 26.250793 | 40.525421 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0169000 | RBH | 18.23259 | 34.424517 | 33.7301435 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0011260 | RBH | 1.614441 | 1.953311 | 3.205786 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0166000 | RBH | 18.4079075 | 37.523289 | 55.812977 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0011600 | RBH | 2.492856 | 26.027655 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0011520 | RBH | 15.209354 | 47.518368 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0011830 | RBH | 1.851110 | 1.107560 | 2.347650 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0011510 | RBH | 1.299458 | 10.381763 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G011450 | RBH | 2.514367 | 9.879943 | 9.207307 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0011760 | RBH | 6.959923 | 39.532471 | 18.977581 |
