Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_06g0005960 | OGI:06011950 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr06:4283171-4299918 | ||||||||
| Gene Symbol | PKL, CHR702, chr702, OsCHR702 | ||||||||||
| DNA seq | gatcatcacatcacaatgccacaattagcaacacagctttagcagtagggtcattacaatgggcctaatcatcctgatggcaaaccagtcaagtgacctattcgacagtgaagagttaaacatttaacagatgcagcggggcaggagctagcaaaacctggtaacctttagtacgacagatttgatggtaatcgttcatctcaggcctggagatgtccaggcctctacaggatgagactagcttagagtgattttttagtttacaacttgtaatatggtaaaagctacagccagtttagcgattagattagacgaaaaaggttcgatattatcgttatgattcctacaaattaactatcgatttccattttgtcctccgccttaacagtgggtggctcctccttcactgcctctatgactggatcttgtactggaggcgtagcttctttggaagctgacgaaggcacctcggttgctggatcttttggagacgtggtctctttggagcttgcatctagcataacttcctctttgggagtggtaccattttcatgggatctcaagatgcgactaacgtcttcgcatacagcttcaaacttatggaggctattggctaaaccggaggaagctgccttgtcaccgaaatgcgagttgagtgcaggaacagcactgtcttcaaggacaaagcacatctgcatatcatagatagataggaagttgtcactcaagaaaattttcaggccagagttagcataggaaaacttttctttgagaggatcccctcaaaaaaaaaaaactttgttccataagtaccttgttgtaaagatgggaaacttgtgactgatcagttgtgccttcaggcgccacttctttggctgcaggaaagaggagagttaccataactcgcattataaagaaaaaagagatgttgttacaataaacaattaaatttcatatatcctgatgacactaccattttggccatttctacatcctattagaaaactagcactagctgaaagcaaatgcccagattccacataagcaaccagaccacatgaacttgttttgggttaattcaaatacatttacatcatctgtgcaaatttagttaagttgcagtaacttccatgatcattaatagtacttgttatttgtacggctctagttctccactcgatgataacagcctgatgaacaagccatactgatcaagcattgtttccaatggatgagcgctctattacgattttacgagtactaaaagctcatgaggaaagaaactactctctccatcccaaaatatagcttccgtagtaaattgaaacatgcaatgattttttcttttgacacggaacatgcaatgaaataggataggacaaagattacaaacagtagcagaagcactggatggttgaattttcatcaaacaagaaacctattgtttcaaacataaacgtgcaatatgtgacagttcaacaggattggtgtcagaattactaagggatatgactttagcatgcttaaacacaaaaccaaggaacatgttccaggaaaccagctgatacgtttggctaaattttctatttttctacttttgaagttctcatttttgggacatatctagtaagcaataagcaataatacatgtatacagtcctcacaagtttttcaagcattgctatgactattctatttgttaacaagaatggcagacatttttctgtcttgtatacttttagactattggtaccagcagatccacctatatcagttacaacaaagaccttattccgtcacatagcgacaactactcaataggttgtcagcttgcgcccaaacagtaacaagacccatactactgctattcactaaccaaacaagtggtttcatcacggcaaatattcttctactacattgtaacagcaccactcagtgattgaattaattattcagaatgtcaaataaaacatactccctccatttcatattataagtcgttttaccttttttctattcaaacttatttaagttcgaccaagtttatagtaaaataactactagtattttcaacacaaaacaagcatattatcaaaatatattcaatgttagatttaatgaaactaatttgatattttatatgttgctaattttttctataaacttggtcaaacttaataaagtttgactaggaaaaaagtcaaacgactatgatatgaaacggagggagtataaaccataagagagcgcatgactaagataagaaaaggcatgtgtccacaactccacacacaaacaagcgtggctgcgtgttcctgtgtagatatgtttgggtgatctagggaacaagggacaacttacaaataggttcaaggacaggcaattctctcagcatttcactgtagtctggaacggccggtctatgaccaccaggaaaatcttgttcagcgagatcatcaggaacaggggtttttgttttaatctgcaaaataccaaaaattgcatgttatacatcctaaaaccaataatcttagtgttaccacccgtgtgagctttgggtgctatatttaaggaaataggtcacaggcataccacagcgtattcaagattcaaacatctctccaaaagatggtatctctttctaataaactcaactatctttctctgtgtatccctgtaatggatcatgctcgttgggttcgactggccttcttgtgtgctttccagatttccctgtcagagatcccaaaaaatgaaatgaaccgcatcctttagtcaagcagaaatcctataacttctgtagaaaaaagttatgtgcgcgcacactaacgtttgtctcattgtttgagtgagaactaatcagttcattagcagtaggaagcctcagctcttgtcgtgcagcctcaaaaatcccattatctctgtcatctgatatatattgccaccttgcatacccatgcctaatgaagggaaaatatatgttaataccttatatggtaactttggacacttaactatgctacaaagtaagaataggaatggaataccatgtagagaatgcatatatcatgaggataatagacactaagcattaatgttaatgcactccttcctttaatacatttgccgccgtacaaccttaaccctactacatcgaagaatctacattatgatgagctaaaacattaataggaattacctcctgatccaaatttatgctatcacatctcaaattcataattgcttcattaaacatagtgttcctcagaatatagcaaaccaatcatgcaaaaggaaaagtggctataaatgaaaacaaacacatggcactattctcatcagcacggaagtacggtactagagaaagttacagatttttttctattgccccctcaatttatttcttagccgtcgcccaacaacattgtttgcgattattaaccataattatcattcttattggttctcaatatacttataaccccccaagagaagcaattaaggaccactgaatgaacaagaaactacgagtagatagcaaaagtgtttcttcaatatgcgaacaaagtggatctgcatgcattggcaccatgcagccatccggctctcgttaattttataaagaaataccatttgtctgttcaataatgtgagcaggacatggatcagatcgttagtttattttaagcagaaggaaaacttatagtagaggggaactgaagtctgaaatattacctagcctggtctatactactggatcttttgcgtaatcagccaatgtcaaaccaattaaaacaaggaatagactgttcatctggtttcatgtgacctggatagcctagttgatacaaacactctctatgttgtagtagaacttaccaaaagaaaacccagaacaacaaacttggaagctcaaagcgcggacctagaacgctaaccagctacacccgtggcagaactattaaaaatctataatcaatacaagaatatactagataaaactaaatactttttatggttcatgtttggaattatcttatgcaaagaattaaaatggtatgtacacattgcatctttttcttgtcatatatactaaaacatataaacatatagcccaacaggtgaccctatgttctcaactgttgactgggcaaggtctaatacactcaactgaaatccaaaaaccaatgttcaagaattagcacagccagaaatcttgtgctggcccctcggctagttacataaaacaaagagtaattcaactatggttattgtagcaaactaatattgccaaatatatgcatactttattaatgctttcagcaacagtagatcctgttccgctttccatactcttccaccaactaagctaggaaattcatataacaaatagctgggaaagagttttgttatttttccttgttccatggcagccacctgaaaccaaaaagaaaaaaagagaaaaagataatgcatgcgttataccatagaaaggttatgaatgttctatcttgttggtaatagataccttctcttccacaagtgatatgttggctagcctgaccaatgtctcatctgtgcgcatttcctttggcacgccatctatattcatgcatatggagatttaaaatgtggatatagaattagagatggacataatcaccattaagctaaatttacctgcataatatcctgagtcattgatgtcctcaagaagatggatcatgacaagttcagcatatctgcaggaaccatgacaaataggcacagtattatagaagcagctaaaagtagaaagcaaataagtgggtgtggcactcgactagtaagttaacatccagctaataatttttaacacttagcattctccatgttattttgttaataatgaacctgaatgccaagtctattggtgtgatcgggagagaaggtaaggaacttctctcccgcgcacgcaagacagggtggctcattagcacatgattaattaagtattggctacagaaaacttgaaattggattaatacaatttttttaagcaaatttcctataattattttccaaccatgtaaaaaacaaaaaagtgatccaaagaaggcattgaaatgaacaaaacagtaagtcaatacacctacctctggatttcctcaacacttttccccttcaatcgaggagtaaattccttccaatcgtagttctgaaaaccatatctgcaaattaaaaGgggggattacttatcaatacatcaatctgtcatgcatttatgaccttccaacagtactattactccatccattcttatttgtcgttcagtacatcaacaaagcctcaaatgaaaatgtttagtcattcttcttctaaacatgtaatcagaaaaaatattatataacatgaaaaaaaaatcattgtaaatctatcgatggcatcttcacatatcaaatcttgaattatatatattttttggcatatattagtgagctaagattttcatggtttgactgcacaatttctaaagcaacatcttatttggggaataatctgggccgggttaagaatggagggggtacttcagagaatgaaccacaaacaattatttggggaacaaactggaccagattagtatgtcctcagatcatgtgtgagtgcacgatcttggacggaaacaattatttggaaacaaaagcttgccaccaacaaattatgctaagcaatatgagaagactttagaacaacacaaagaaaatatgtacataagaaaatacagtagattctttcactccaaaacaaaaagagagaatcccttatatgccactctaaattaaccggctcccttatatgccactttaaattggcttctcctttttatgccaccggttcaagtttcacctcccttttatgccattgccgtcagtccaccgtcagttgaccgttaacttcattgtaaaaagacgcatttgcccttgagaattagtatacaaccaataataggtattttagtactaatatagctactgcaacatatgaaaattgaattttttttctgcatcacatgcaattttagccattaccatcacaaataaattttcaatgtaaacatgaaacatgcagttttccaacaatatttttaatataaagagcatttttcactggttctgacaaaattttgttcactcaaaaaggatttaaaataaattagttatgattttttgaagtttacacattttttagttgagagggcatattggtcatttacgaaaaaaaactaacatttgactaacagtcaactaacactatggtggtgggagtggcataaaaggatggaaaaacttgaactagtgacatataagggagaagccaattttgagtggcatataagggaactggtcaatttctagtggcatataagggattatctcaaaaaggatataacagaaccagcaaactaccatgtgtgccctgctttaccgctcttatctaaagcccttacaaaaccattctgtccaatatcctgctttactgcccaagcatgcccactgagctattaaagagggttagagtttactaaagttaaatgagcaagttaacaaaagcaggacgagttctcattagatttttatttattcaaaaagtagaattttaagccaatattccaactaacctcataagcgtttgaaggaattgtgttcgctgaatttggttgaacccataaactctcaaagcccgtccttcgccctccatgaatggaagtgaatcaacattacctagtgaaagttgattagaaaggtaaataaatgcacaacattcaccatgcaacaacagtacatgataaaattactacgttgttttttcttggaatatgggcccctcctcccagcaaggcctgattgtaaacttgtgtcgttatctgacacatcatcatcataagagtaatcatcatcttcagaactcatgtcatgcaggccggtaatgtcgtcctcatcagcagcagccatctacacatagtattttattagtatatttatccagcactaaaaaaatcgagtaaagtagaatatactccctccggcccaaaatataagcatttttagcatagtgtcaagtcaaccattttaaactttgactaattaatagcaagaaagtaaaaaaaaatcgatcatgtaaaattgatgttattagatttatcattaatgaaactaccataacatgcaactctttttatttaaaacattatatttttgtagatattgttggtcaaagtagcatctcgaagactatgtcgaagtcccaaaatgcttatattctgggacggagggagtatattggtaaataaacacaaatggtgcattcagctccaggtttcttgcctagtttggaattacaaaccatagttgttatatggtgttcattcaatgatcttattttttgaaataagtgtaagttggcaacaggtctcagtatacccttgataaaatcccatcggttgttgatccgcagataaacaatgcatataaaagcaaaagttaatgaggataacatataggactggttacctgtttgcggctcctttttccttttcccatagtagtatgctcttcaactttttgtacatcgtatctgtccttcaataatttatcccaaaaatttgctctgtcagagtttgcagcttcagcttcggcctttttgcgtgcctcctcctcttttgcagctaaagccttagcttcatctatgtactcaaagttagcaacctgcaaacagttacttgaaaaataagaactgtatgttgattggtagaatatgccaacaacaaagcaaaacacaaagaggaaaggtgattctttataatagttatattacatggtactttgataataaatggaccaaaagttgtacagcatgaaagataaagagtggtaaaattaacaagctgatgtaaagtcgtacagtgtatgcagaaccacattacctcattaggtgtgtttgtttcacgatatatgacaactgacaaccaccaaatgtattggcttagcatcaaccttaaaacaagaggctagtccaaatttatgtttacttttggttttttccaaggaaaaagcaacatgcatgatgatccttcattatctcataaatatacagattactgccaaaatagaagtgacagcaggcatctcgtaagaataactaaaatgagctcctcatgcacagtaccttgaatccttttagaaattcgtcttcttcttcatcttccacaggctcttccccgtcagcttggtcacggtccaataatctgtcaggccagtacacagaaaaatcaaaaaggtgtcatcaagcaatggtgattttacaatgtcaagtcctacagaataccaccacgaattggcaaggaaaaaaaaggcaaactgtttcacaattttttcggaacataggcagaacatgtatcatagattgtgtgagaatagaacagggaaattaagagtaacacaaacttatataataaaaataattattttgcttactttctagtttctacgggaatacacctagatggtagtgttcagtattatatataccccttcactataatgactgaaataaaaaaaattgctagattgatgaaaatcactaaattcaaagttttgggagtagtttaaattacttcacactaaatactatccaagttaaaaatgatgaaattgtgtacctatcaatcgcagcatcatcataatggatttggcaagattttccggcttcatcattttcatcgtcaaaaagttcctttgagccatgccgaataatatcatccaactcctcctgaaaaaggacaagagtcatgcatcttatttggcgaaattagtacaacaggggattcacaagtgcagcaaaataatggatttgatactacaatgaaaggtcccgtcaaataacattgcacaaaaaaattcatcactgatcacccacccaggtaatatatcatattaactagacttatccataagaactttgaagcaaagaagagttttctacgatcagctgaacaaacaagaatccccttgcaaaccaagcctataaagcataaatgtatacaccacagcatgaccaaataagctcaaggaccaaagaatctaattgttagggtaatgcaattatgtcaagagaaacaatttatctaacaactgcattaaccaccaacgttggtactttctaaaacccctacatacaaatcattctaaatcaaagcaacaatattacctggacaatattagtgcctttcgtgagacgcccaacaactaagtgctccaataccatttttttctttgtaagttgcatcatccgctcctcaattgtaccacgactaacaagcctatatatcataacctgcaaaagaaaattaatttaacataatttatcgttaaaagctaggacaagagttcacaaaaatcaacaatcaaatagataagagcttaagataaaataccttgcttgtctgccctaagcgatgggctctcgccatagcttgtaaatcagcatgaggattccaatcactgaatgtaaatggaaatgataggttaaagtaaactcaaaacattgtgttccttttttttctaattacaaattgtttcacctgtcataaataattacagtatcggcagttgccagatttataccaagaccaccagctctggttgaaagaagaaagcaaaacctagtagaatttttagcattgaagcgatcaattcgtatctgcctctcagcaccacctatttttccatcaatacgctcataactccatttctgaaacatgagacattaaaaatgtggtatatcaaaatacattaacctgcatagttaacaatagtctccacaggatgatagttaaatacccggtagcttaaataatcctcaagtaagtccaacatgtgctggaactgtgaataaataagaaccctgtgaccctgctctttcagtttcaccatcatcttgtcaagcagctccatttttccagaagattctaaaagcctcctgcaaaatcaagggagtaaaagatggtaattccaaaagaaagaaatatagaacctaaagtctaatcggtagatctaaactgccctggaaaatggcataaacttgatcggtcaatctagtttaacataggaatgatataattgcaaataaacaatctgaaatatcaatcatatgtgcattctagaatatgggtccagaattacaactcaatcacaaaaaaagccaactactacaaaacagaccttcatagcactgaactaaaacctagacaattggtggtaaattgcatgcattttttcagtacaactttctttatgacatgcaatagaacaacaacattaccagatgtcaacaacttcaaatatggcattgtgtttgttaagacgtgaaatgaaaagataacagcaagagatatcagagaactccagtacctctgcatcaatatgtgtttgaaagtaataaaaagctggtagtggaattaaaatgttaatgacatcagaaaatctgtgtgcaatattaatttccagttatagtatcaaaggcatcatgtaaaagaacaacggcaaaccctaataactaacagaatcagtatcaaaatactcagaccaatcggtatcaaaataaaatagcaggttaaaaagcaatttgtgcaccttaaagcttcttctgaattggcaggctcttcgggttcatctgtcatgaatgcatggcaacaaagtttgcgtagttccattacaacattaataagtgaaacctggaatcaaacaggaaaaaattatccatagcaggccaagatataagacattaatacaacgtgggaataaaaatattacatgtccaccactacgacgagttaacacttcataattcttggtgagaattgctttatagtactctttttgtttgcttgtaagctcaacacgtaaaatcagctcctttttcggaggaagttctttcataacatctttcttgaatcctatttgagcacaaaaggcaataggttgcaatttttgttagctaaaataactcgagtctcagacagaactttaagtgtctaaaaatggtaacagcatctattcagtagtatttttcagtttaccaaacgaaaattatcccataatagactctgAaaaaaaaagatgcactcaattgtaaaaggtgcacatggtaacaaaaaggatttggaaaaacagccacagttcacagttatgcaagttacactaataatgcaaaaatgtagaaagtcaagactcaaaaattttctgatgatctatctaacatagatagatcttttatgttcaccatttgtccctaatgtaagatgaagttgcatattacatgcatgtgcaaaagaaaaaccatcttgacaagccaaaccatacacctaacaggaaaaaaaatgttaagtaaattcatacgccgaagaagatgcggcttcagcattccatggagcttctcaacttgtttgtcctggtttatgtccttgaattcctcttggagatcagctatactaccaaactacaaatgaaatgttgtaatattagatgataaaagaatagaatggaaatttcaacactataaaaggttggatcaagaatatgcaatgcattgcgtatccatgaagatgtgcgacaaaggtattttcgccaaacagaaagaatatggggaaaacatactcaattcaaaatagccagaaagatgagtgaaggaagcataagcttatactatgattattcgcagaacagtttaatgtctttttactatctaaatgctaacctaattatgttctgcttgtgcctgccaaaataatgatttttatactccagagatcaatttcaccaccagaaaaaactcttaatttatggcttctgccagtatcaacttatagttttccccagaagctgacaatatataagcacaaaaggtacaaaaccgtgacagctacctcaatattagttacactctgaaacgaaatatcaacagtaacccacaattgcgacaataaaaagtaagctgtttggcttgccccaaaaaaatatcacaatcatggcaacgcacttcaataatgcgattttaatttaatttgtccagcaattaattaaatgaaaactgagagaccagaggaaacagaacataaaataaacaaacataacaagaataaacgtaacaaaaactgttcagtggaatattggtcaatgagcatatgctaaaagctaggaaattgtctatcaatgaccacattactgtcaagtccttgaacaggcaccgtaaggaagacctaatgagcaacagtttcatgaattaaattaataaaatgttagcatccaaaagtataaaatcttacactgtcaccctcaaggaagtgcataagcatgaaaagttcatccaggttgttctgggaacaaagaaagataggatatcaactttaacgcgaaactggaaaattcaatagtttaatacaaggaacagtgcatataagatatcaattaaccataaaatggtgttaactaataaatcgaatgactaacggatcaaagctgagggttactgtttctagcaagaaagatggcataatatcacatgcatatgcaaattaaggtgttattcatactatatctgcagtgaataatgccataatatatgccatcacagggtcaaggattagtttcttttttaattgcaaaggtacagtgtttaatcattacatttcgatccatgtgatgaatgtataggtcaaaaaagcaattgatatttgtttgcaaaagccgacagctgtttatcaaagaagttcctattatctactaatgtccttaagtcccactgtggagatacagctctaaaaactcctgagtatttccatattttggaaacaacgagtaaaaaaatacggactatacactgccagaaatcagagcctaaaggttcaaagcagtattgaaacctcaaaagaactaactataagtagctttcaacatttaattttccattaagctaagaaaaccaacaatgaaggtttttagtcaatgaatataaagcagtaacctgaactggggttcccgttaagagaacacgatgcttagtatgatactctttaagttgaccgaacaacttggaatctttgttcttcaaacgatgcccctcatccacaatctgcaataaagcattaccaattggagaaaagtcaatcagaacttaagagcaatttaaacattctccagagaattgaagcgtatagaaagggagatggcaaaagaagtaccatgcattcccattctatggtttttagaacagtagaatccatattgatcatctcataagatgtcaaaaggacatcaaattttattcttgattgtttcttgtcttcattagatggagatgatttctttttcttaagcttcttaggtttctctttggggtagtaaaattcatacttcctaataatttcacgagaagctgcggatccaaaatacattacctggcaaacatgaagaaaaaaaataagtcgaaagaattatgagttagtataatccacgtacaacattataaattagtataatccacgtacaacattcatttgaggtgcccaagttgcaaattcacgctcccaatttcgcaaggttgaaaggggtgcaacgaccagatgaggaccaagcttgtccacaaatagagagcccaaaaaggcaatactctgtatcgttttacctgcattatttttgtagtgataagtgtactcacttggtcaagaccccaatacagcataccataaaacactttcattcttaacagtaaaaatcacttaccaagacccatctcgtccccaagtattacacgtttattatggtaccaagaatagcgtaagaagtttaacccttcaagctggtagggatgtagtgtcccttcatgtaaaaaatgcaaaataaaaaacaaggaaatatgtagtcaattagaaataaaaatttaattcccaggaattattcgtgttttaaatgcagcataccaccagagagaaacttcgggctctccttatattgacgtatctcacgagtgacactcttgcacttgtcagtagacttcttcctcctggactgaatctcattgaagcgttcaatctgaggctgaaagactgcaatgtcggagtcattttcccaagtacattcgtcgtatgttagttccttccatttcacatagtactccctttcaccagtagagctttttcttttttttcacaaaatatttAaaaaaaaaagacaatcatacagtcagcctttgctaaaaattgatgggtgtaaagaagataataagtgaacactaagattggtgaaactaacctgacagcactatgaaagtaaagtggaatgatgttattatttctcgttaccacatttaattgaggaataacatgacagcaatagggttttcacacggtatcaaattaccttcaattggaaagtttgtcgttgagtaataggctaactatcatggtaaacattataaatggagtacatattaccactaacagcatcaatatatgcatccacagtaacagtaataactattaacctaacacaaagctacatgcatgtgtcagttaccaaagaaaggctggtctagctggtcatattatcataatattaatagcaacaaaagcaactaattatcagccagtaaatcacatcccttctattgtcacaactatacaaggtaaaaagatcaagcctcgcatagctttgttcgttgtatccatacctggtagcaaggatcctgtcaacagtagtccactcaggtctaattgcagaatagtcatcatcagacttatccgttgaatccatttgcttatggaagttattgagtctagttttcagccgggggtatatcttggcagtttccaaatattcactttctgaaaccctatttttatgagtcaacgttaatagagcagaagcagtatgcaacacaattttgcattgagctattgaatagataagtaccaagtgcagtgaaggtgtgatattcctttccattttataagatatcgtttgacaggtttcttctttgatccggactcagaagaactagtctcttcagaagcatcaggttttgtttcttcacagtctaatatcttttccatttccgtaagagggctaacctgaaaataacaaatgaggtgctttgttaccagcggtgtcaatcattaagtggaacggagtctactgaagaagggaaatgcatacacattcagggcagctccatttatcagatgtgatatttaagcgaggaaccaaacatttcctgtgaaatgcataagtacaagttgaacatggtactagattgtcattttctccacatttctggcaagcatcttctttctgcacacacaggtgaataactacaaataaatacaggaccattaaactgaaaatagatatatcaagaaatacataagcatatgaaaattacaggaagttaagaaaccaagccccgaaaaactgaagctccactacacatatgagaaataaaaagccaagtacaaaatcaccaaacgaggaaaaacggaaatgagaatgatgatattggcatgctcccttttgtttaaaaacagattgaattaattttcttacaaatctcagcaaattgccaactcttctagtttatgataaaatctttgaaccaacaaaataatgtaagtttagctatcacgacaaggacagttagaaacaccgtcatcacctcttatcatccaacaattaaacttggtatactaaggcatcgtatatttctcaggatgcacactagagactgtattttttcataatcccgaattagtagctgcttaacgtagcagacagatcaggcctaaattcaaatttcagtaccccatcggtaccaagcaacaaactcattcaaccaaatcacccactggctttctcaaacaccagccagccaagcttaacctatcaccgccaaatccctaaactaatcctcccgcttctcagcaattaagccatttcacaaccgactaccctagcaaggcagccatcaaattccccaaaaccagaagctaaaatcctagcatggcagcagccaattccacaaaaaccacagaaatcagagccaattcagcagtaacagctttagaaatcagagcaactgagaccaaaaacagaagagaagagaatcagggcccccctgatcggccgccataccgcgtcctcccgctcgatccgctcggtggggccgtcgctgtgccgatccctccccttcccgcccccgccgcgcggcgggaggtcgtcgtcggactcatcgagcgtgtacagcggccgcttctccgaccgcacccgcagccgctccaccaggctgctcatcccgccgccgCcccccggaactcccttccggatcaaaaccctaaaaccacccaccctctcgccgcgccgcctcggagttGgggggggctagggtttggtggtttttgggggtagggagaggggagcgtacttataccgccgcgtgggggagggggagggtgaggtggcgcgtggagaggaggcggcggaaatggaaggtagtgacggcgaggggaggcggcggcgaggcccgtgcccctcgtgtgggcggtggaggaggcgggcggcgaggggacgcgtctctctctctctctctctctgcgtgtgctctcggactcggagagaggagggggaggagggaggcagtggtaacggccactgcggcagggg
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| CDS seq | atgagcagcctggtggagcggctgcgggtgcggtcggagaagcggccgctgtacacgctcgatgagtccgacgacgacctcccgccgcgcggcgggggcgggaaggggagggatcggcacagcgacggccccaccgagcggatcgagcgggaggacgcgaaagaagatgcttgccagaaatgtggagaaaatgacaatctagtaccatgttcaacttgtacttatgcatttcacaggaaatgtttggttcctcgcttaaatatcacatctgataaatggagctgccctgaatgtgttagccctcttacggaaatggaaaagatattagactgtgaagaaacaaaacctgatgcttctgaagagactagttcttctgagtccggatcaaagaagaaacctgtcaaacgatatcttataaaatggaaaggaatatcacaccttcactgcacttgggtttcagaaagtgaatatttggaaactgccaagatatacccccggctgaaaactagactcaataacttccataagcaaatggattcaacggataagtctgatgatgactattctgcaattagacctgagtggactactgttgacaggatccttgctaccagaaaaagctctactggtgaaagggagtactatgtgaaatggaaggaactaacatacgacgaatgtacttgggaaaatgactccgacattgcagtctttcagcctcagattgaacgcttcaatgagattcagtccaggaggaagaagtctactgacaagtgcaagagtgtcactcgtgagatacgtcaatataaggagagcccgaagtttctctctggtgggacactacatccctaccagcttgaagggttaaacttcttacgctattcttggtaccataataaacgtgtaatacttggggacgagatgggtcttggtaaaacgatacagagtattgcctttttgggctctctatttgtggacaagcttggtcctcatctggtcgttgcacccctttcaaccttgcgaaattgggagcgtgaatttgcaacttgggcacctcaaatgaatgttgtaatgtattttggatccgcagcttctcgtgaaattattaggaagtatgaattttactaccccaaagagaaacctaagaagcttaagaaaaagaaatcatctccatctaatgaagacaagaaacaatcaagaataaaatttgatgtccttttgacatcttatgagatgatcaatatggattctactgttctaaaaaccatagaatgggaatgcatgattgtggatgaggggcatcgtttgaagaacaaagattccaagttgttcggtcaacttaaagagtatcatactaagcatcgtgttctcttaacgggaaccccagttcagaacaacctggatgaacttttcatgcttatgcacttccttgagggtgacagttttggtagtatagctgatctccaagaggaattcaaggacataaaccaggacaaacaagttgagaagctccatggaatgctgaagccgcatcttcttcggcgattcaagaaagatgttatgaaagaacttcctccgaaaaaggagctgattttacgtgttgagcttacaagcaaacaaaaagagtactataaagcaattctcaccaagaattatgaagtgttaactcgtcgtagtggtggacatgtttcacttattaatgttgtaatggaactacgcaaactttgttgccatgcattcatgacagatgaacccgaagagcctgccaattcagaagaagctttaaggaggcttttagaatcttctggaaaaatggagctgcttgacaagatgatggtgaaactgaaagagcagggtcacagggttcttatttattcacagttccagcacatgttggacttacttgaggattatttaagctaccggaaatggagttatgagcgtattgatggaaaaataggtggtgctgagaggcagatacgaattgatcgcttcaatgctaaaaattctactaggttttgctttcttctttcaaccagagctggtggtcttggtataaatctggcaactgccgatactgtaattatttatgacagtgattggaatcctcatgctgatttacaagctatggcgagagcccatcgcttagggcagacaagcaaggttatgatatataggcttgttagtcgtggtacaattgaggagcggatgatgcaacttacaaagaaaaaaatggtattggagcacttagttgttgggcgtctcacgaaaggcactaatattgtccaggaggagttggatgatattattcggcatggctcaaaggaactttttgacgatgaaaatgatgaagccggaaaatcttgccaaatccattatgatgatgctgcgattgatagattattggaccgtgaccaagctgacggggaagagcctgtggaagatgaagaagaagacgaatttctaaaaggattcaaggttgctaactttgagtacatagatgaagctaaggctttagctgcaaaagaggaggaggcacgcaaaaaggccgaagctgaagctgcaaactctgacagagcaaatttttgggataaattattgaaggacagatacgatgtacaaaaagttgaagagcatactactatgggaaaaggaaaaaggagccgcaaacagatggctgctgctgatgaggacgacattaccggcctgcatgacatgagttctgaagatgatgattactcttatgatgatgatgtgtcagataacgacacaagtttacaatcaggccttgctgggaggaggggcccatattccaagaaaaaacaacgtaatgttgattcacttccattcatggagggcgaaggacgggctttgagagtttatgggttcaaccaaattcagcgaacacaattccttcaaacgcttatgagatatgctgaacttgtcatgatccatcttcttgaggacatcaatgactcaggatattatgcagatggcgtgccaaaggaaatgcgcacagatgagacattggtcaggctagccaacatatcacttgtggaagagaaggtggctgccatggaacaaggaaaaataacaaaactctttcccagctatttgttatatgaatttcctagcttagttggtggaagagtatggaaagcggaacaggatctactgttgctgaaagcattaataaagcatgggtatgcaaggtggcaatatatatcagatgacagagataatgggatttttgaggctgcacgacaagagctgaggcttcctactgctaatgaactgattagttctcactcaaacaatgagacaaacggaaatctggaaagcacacaagaaggccagtcgaacccaacgagcatgatccattacagggatacacagagaaagatagttgagtttattagaaagagataccatcttttggagagatgtttgaatcttgaatacgctgtgattaaaacaaaaacccctgttcctgatgatctcgctgaacaagattttcctggtggtcatagaccggccgttccagactacagtgaaatgctgagagaattgcctgtccttgaacctatttccaaagaagtggcgcctgaaggcacaactgatcagtcacaagtttcccatctttacaacaagatgtgctttgtccttgaagacagtgctgttcctgcactcaactcgcatttcggtgacaaggcagcttcctccggtttagccaatagcctccataagtttgaagctgtatgcgaagacgttagtcgcatcttgagatcccatgaaaatggtaccactcccaaagaggaagttatgctagatgcaagctccaaagagaccacgtctccaaaagatccagcaaccgaggtgccttcgtcagcttccaaagaagctacgcctccagtacaagatccagtcatagaggcagtgaaggaggagccacccactgttaaggcggaggacaaaatggaaatcgatagttaa
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| Protein seq | MSSLVERLRVRSEKRPLYTLDESDDDLPPRGGGGKGRDRHSDGPTERIEREDAKEDACQKCGENDNLVPCSTCTYAFHRKCLVPRLNITSDKWSCPECVSPLTEMEKILDCEETKPDASEETSSSESGSKKKPVKRYLIKWKGISHLHCTWVSESEYLETAKIYPRLKTRLNNFHKQMDSTDKSDDDYSAIRPEWTTVDRILATRKSSTGEREYYVKWKELTYDECTWENDSDIAVFQPQIERFNEIQSRRKKSTDKCKSVTREIRQYKESPKFLSGGTLHPYQLEGLNFLRYSWYHNKRVILGDEMGLGKTIQSIAFLGSLFVDKLGPHLVVAPLSTLRNWEREFATWAPQMNVVMYFGSAASREIIRKYEFYYPKEKPKKLKKKKSSPSNEDKKQSRIKFDVLLTSYEMINMDSTVLKTIEWECMIVDEGHRLKNKDSKLFGQLKEYHTKHRVLLTGTPVQNNLDELFMLMHFLEGDSFGSIADLQEEFKDINQDKQVEKLHGMLKPHLLRRFKKDVMKELPPKKELILRVELTSKQKEYYKAILTKNYEVLTRRSGGHVSLINVVMELRKLCCHAFMTDEPEEPANSEEALRRLLESSGKMELLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLSYRKWSYERIDGKIGGAERQIRIDRFNAKNSTRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTSKVMIYRLVSRGTIEERMMQLTKKKMVLEHLVVGRLTKGTNIVQEELDDIIRHGSKELFDDENDEAGKSCQIHYDDAAIDRLLDRDQADGEEPVEDEEEDEFLKGFKVANFEYIDEAKALAAKEEEARKKAEAEAANSDRANFWDKLLKDRYDVQKVEEHTTMGKGKRSRKQMAAADEDDITGLHDMSSEDDDYSYDDDVSDNDTSLQSGLAGRRGPYSKKKQRNVDSLPFMEGEGRALRVYGFNQIQRTQFLQTLMRYAELVMIHLLEDINDSGYYADGVPKEMRTDETLVRLANISLVEEKVAAMEQGKITKLFPSYLLYEFPSLVGGRVWKAEQDLLLLKALIKHGYARWQYISDDRDNGIFEAARQELRLPTANELISSHSNNETNGNLESTQEGQSNPTSMIHYRDTQRKIVEFIRKRYHLLERCLNLEYAVIKTKTPVPDDLAEQDFPGGHRPAVPDYSEMLRELPVLEPISKEVAPEGTTDQSQVSHLYNKMCFVLEDSAVPALNSHFGDKAASSGLANSLHKFEAVCEDVSRILRSHENGTTPKEEVMLDASSKETTSPKDPATEVPSSASKEATPPVQDPVIEAVKEEPPTVKAEDKMEIDS |
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| Function | CHD3-type chromatin-remodeling factor PICKLE [UniProtKB/Swiss-Prot:Q9S775] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_06g0005960 | OsLima_06g0005960.01 | Chr06 | 4283171 | 4299918 | - | NAM | ||
| CDS seq | atgagcagcctggtggagcggctgcgggtgcggtcggagaagcggccgctgtacacgctcgatgagtccgacgacgacctcccgccgcgcggcgggggcgggaaggggagggatcggcacagcgacggccccaccgagcggatcgagcgggaggacgcgaaagaagatgcttgccagaaatgtggagaaaatgacaatctagtaccatgttcaacttgtacttatgcatttcacaggaaatgtttggttcctcgcttaaatatcacatctgataaatggagctgccctgaatgtgttagccctcttacggaaatggaaaagatattagactgtgaagaaacaaaacctgatgcttctgaagagactagttcttctgagtccggatcaaagaagaaacctgtcaaacgatatcttataaaatggaaaggaatatcacaccttcactgcacttgggtttcagaaagtgaatatttggaaactgccaagatatacccccggctgaaaactagactcaataacttccataagcaaatggattcaacggataagtctgatgatgactattctgcaattagacctgagtggactactgttgacaggatccttgctaccagaaaaagctctactggtgaaagggagtactatgtgaaatggaaggaactaacatacgacgaatgtacttgggaaaatgactccgacattgcagtctttcagcctcagattgaacgcttcaatgagattcagtccaggaggaagaagtctactgacaagtgcaagagtgtcactcgtgagatacgtcaatataaggagagcccgaagtttctctctggtgggacactacatccctaccagcttgaagggttaaacttcttacgctattcttggtaccataataaacgtgtaatacttggggacgagatgggtcttggtaaaacgatacagagtattgcctttttgggctctctatttgtggacaagcttggtcctcatctggtcgttgcacccctttcaaccttgcgaaattgggagcgtgaatttgcaacttgggcacctcaaatgaatgttgtaatgtattttggatccgcagcttctcgtgaaattattaggaagtatgaattttactaccccaaagagaaacctaagaagcttaagaaaaagaaatcatctccatctaatgaagacaagaaacaatcaagaataaaatttgatgtccttttgacatcttatgagatgatcaatatggattctactgttctaaaaaccatagaatgggaatgcatgattgtggatgaggggcatcgtttgaagaacaaagattccaagttgttcggtcaacttaaagagtatcatactaagcatcgtgttctcttaacgggaaccccagttcagaacaacctggatgaacttttcatgcttatgcacttccttgagggtgacagttttggtagtatagctgatctccaagaggaattcaaggacataaaccaggacaaacaagttgagaagctccatggaatgctgaagccgcatcttcttcggcgattcaagaaagatgttatgaaagaacttcctccgaaaaaggagctgattttacgtgttgagcttacaagcaaacaaaaagagtactataaagcaattctcaccaagaattatgaagtgttaactcgtcgtagtggtggacatgtttcacttattaatgttgtaatggaactacgcaaactttgttgccatgcattcatgacagatgaacccgaagagcctgccaattcagaagaagctttaaggaggcttttagaatcttctggaaaaatggagctgcttgacaagatgatggtgaaactgaaagagcagggtcacagggttcttatttattcacagttccagcacatgttggacttacttgaggattatttaagctaccggaaatggagttatgagcgtattgatggaaaaataggtggtgctgagaggcagatacgaattgatcgcttcaatgctaaaaattctactaggttttgctttcttctttcaaccagagctggtggtcttggtataaatctggcaactgccgatactgtaattatttatgacagtgattggaatcctcatgctgatttacaagctatggcgagagcccatcgcttagggcagacaagcaaggttatgatatataggcttgttagtcgtggtacaattgaggagcggatgatgcaacttacaaagaaaaaaatggtattggagcacttagttgttgggcgtctcacgaaaggcactaatattgtccaggaggagttggatgatattattcggcatggctcaaaggaactttttgacgatgaaaatgatgaagccggaaaatcttgccaaatccattatgatgatgctgcgattgatagattattggaccgtgaccaagctgacggggaagagcctgtggaagatgaagaagaagacgaatttctaaaaggattcaaggttgctaactttgagtacatagatgaagctaaggctttagctgcaaaagaggaggaggcacgcaaaaaggccgaagctgaagctgcaaactctgacagagcaaatttttgggataaattattgaaggacagatacgatgtacaaaaagttgaagagcatactactatgggaaaaggaaaaaggagccgcaaacagatggctgctgctgatgaggacgacattaccggcctgcatgacatgagttctgaagatgatgattactcttatgatgatgatgtgtcagataacgacacaagtttacaatcaggccttgctgggaggaggggcccatattccaagaaaaaacaacgtaatgttgattcacttccattcatggagggcgaaggacgggctttgagagtttatgggttcaaccaaattcagcgaacacaattccttcaaacgcttatgagatatgctgaacttgtcatgatccatcttcttgaggacatcaatgactcaggatattatgcagatggcgtgccaaaggaaatgcgcacagatgagacattggtcaggctagccaacatatcacttgtggaagagaaggtggctgccatggaacaaggaaaaataacaaaactctttcccagctatttgttatatgaatttcctagcttagttggtggaagagtatggaaagcggaacaggatctactgttgctgaaagcattaataaagcatgggtatgcaaggtggcaatatatatcagatgacagagataatgggatttttgaggctgcacgacaagagctgaggcttcctactgctaatgaactgattagttctcactcaaacaatgagacaaacggaaatctggaaagcacacaagaaggccagtcgaacccaacgagcatgatccattacagggatacacagagaaagatagttgagtttattagaaagagataccatcttttggagagatgtttgaatcttgaatacgctgtgattaaaacaaaaacccctgttcctgatgatctcgctgaacaagattttcctggtggtcatagaccggccgttccagactacagtgaaatgctgagagaattgcctgtccttgaacctatttccaaagaagtggcgcctgaaggcacaactgatcagtcacaagtttcccatctttacaacaagatgtgctttgtccttgaagacagtgctgttcctgcactcaactcgcatttcggtgacaaggcagcttcctccggtttagccaatagcctccataagtttgaagctgtatgcgaagacgttagtcgcatcttgagatcccatgaaaatggtaccactcccaaagaggaagttatgctagatgcaagctccaaagagaccacgtctccaaaagatccagcaaccgaggtgccttcgtcagcttccaaagaagctacgcctccagtacaagatccagtcatagaggcagtgaaggaggagccacccactgttaaggcggaggacaaaatggaaatcgatagttaa
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| Protein seq | MSSLVERLRVRSEKRPLYTLDESDDDLPPRGGGGKGRDRHSDGPTERIEREDAKEDACQKCGENDNLVPCSTCTYAFHRKCLVPRLNITSDKWSCPECVSPLTEMEKILDCEETKPDASEETSSSESGSKKKPVKRYLIKWKGISHLHCTWVSESEYLETAKIYPRLKTRLNNFHKQMDSTDKSDDDYSAIRPEWTTVDRILATRKSSTGEREYYVKWKELTYDECTWENDSDIAVFQPQIERFNEIQSRRKKSTDKCKSVTREIRQYKESPKFLSGGTLHPYQLEGLNFLRYSWYHNKRVILGDEMGLGKTIQSIAFLGSLFVDKLGPHLVVAPLSTLRNWEREFATWAPQMNVVMYFGSAASREIIRKYEFYYPKEKPKKLKKKKSSPSNEDKKQSRIKFDVLLTSYEMINMDSTVLKTIEWECMIVDEGHRLKNKDSKLFGQLKEYHTKHRVLLTGTPVQNNLDELFMLMHFLEGDSFGSIADLQEEFKDINQDKQVEKLHGMLKPHLLRRFKKDVMKELPPKKELILRVELTSKQKEYYKAILTKNYEVLTRRSGGHVSLINVVMELRKLCCHAFMTDEPEEPANSEEALRRLLESSGKMELLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLSYRKWSYERIDGKIGGAERQIRIDRFNAKNSTRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTSKVMIYRLVSRGTIEERMMQLTKKKMVLEHLVVGRLTKGTNIVQEELDDIIRHGSKELFDDENDEAGKSCQIHYDDAAIDRLLDRDQADGEEPVEDEEEDEFLKGFKVANFEYIDEAKALAAKEEEARKKAEAEAANSDRANFWDKLLKDRYDVQKVEEHTTMGKGKRSRKQMAAADEDDITGLHDMSSEDDDYSYDDDVSDNDTSLQSGLAGRRGPYSKKKQRNVDSLPFMEGEGRALRVYGFNQIQRTQFLQTLMRYAELVMIHLLEDINDSGYYADGVPKEMRTDETLVRLANISLVEEKVAAMEQGKITKLFPSYLLYEFPSLVGGRVWKAEQDLLLLKALIKHGYARWQYISDDRDNGIFEAARQELRLPTANELISSHSNNETNGNLESTQEGQSNPTSMIHYRDTQRKIVEFIRKRYHLLERCLNLEYAVIKTKTPVPDDLAEQDFPGGHRPAVPDYSEMLRELPVLEPISKEVAPEGTTDQSQVSHLYNKMCFVLEDSAVPALNSHFGDKAASSGLANSLHKFEAVCEDVSRILRSHENGTTPKEEVMLDASSKETTSPKDPATEVPSSASKEATPPVQDPVIEAVKEEPPTVKAEDKMEIDS
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_06g0005960 | OsLima_06g0005960.02 | Chr06 | 4283320 | 4299912 | - | IsoSeq | ||
| CDS seq | cgcagtggccgttaccactgcctccctcctccccctcctctctccgagtccgagagcacacgcagagagagagagagagagagacgcgtcccctcgccgcccgcctcctccaccgcccacacgaggggcacgggcctcgccgccgcctcccctcgccgtcactaccttccatttccgccgcctcctctccacgcgccacctcaccctccccctcccccacgcggcggtataagtacgctcccctctccctacccccaaaaaccaccaaaccctagcccccccCaactccgaggcggcgcggcgagagggtgggtggttttaggg
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| Protein seq | RSGRYHCLPPPPPLSESESTRRERERERRVPSPPASSTAHTRGTGLAAASPRRHYLPFPPPPLHAPPHPPPPPRGGISTLPSPYPQKPPNPSPPQLRGGAARGWVVLG |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| SE | Chr06 | 4287912 | 4289829 | - | OsLima_06g0005960.02 | OsLima_06g0005960.01,OsLima_06g0005960.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.117856 | 0.849963 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0183800 | RBH | 9.752417 | 9.682755 | 20.884554 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g08480 | RBH | 6.199584 | 6.031135 | 4.921772 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0183800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0005890 | RBH | 3.532682 | 38.102989 | 30.180616 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0005730 | RBH | 1.626381 | 9.089813 | 15.695307 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0005700 | RBH | 8.123445 | 28.912340 | 52.555756 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0005900 | RBH | 1.049311 | 1.109076 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0005770 | RBH | 40.172352 | 82.491798 | 86.007065 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0071500 | RBH | 23.1936675 | 64.8882635 | 67.2832315 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0005640 | RBH | 1.612495 | 2.918220 | 8.180533 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0070700 | RBH | 26.750336 | 73.3577045 | 77.5054205 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0005810 | RBH | 2.474306 | 46.006409 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0005810 | RBH | 18.343210 | 65.409081 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0005860 | RBH | 1.061506 | 0.973985 | 1.221038 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0005690 | RBH | 1.585616 | 17.286028 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G005570 | RBH | 2.940026 | 10.723156 | 10.874885 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0005810 | RBH | 8.514817 | 84.597488 | 39.414539 |
