Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_06g0004960 | OGI:06009850 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr06:3508980-3519013 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | tgccaagaaacactcggccgactaccagcattgctttatgattagtaggatgcaataatatatcttagccgagatctacataatacaatatcgagagtaagcaaaatcttcactgttatcatggcgtgcacttgtacaaactacaaacaccctgttctttcaagggcagactacatcagggtatacaatctcctcaaaacaagcatcatatgctactaccggttgcgtcaagttacaggttacagatctctactcgaaacagcgcgaagttcgtagcagaaaggctatggtagcataggcgttcgtggcgcctgcttacgtgaaggtgtcctccctatcaccttctgcgacctcgccctcgtcgatgttgctgaactcgaggaaatgcgtcggccgatggtcctcgtgatagaagtcccggggcgtgccaagcttcatgttgtacttcatcagcgggtcgtgcttgactcccatgaagttgaagttccaaggggtgttatccggcacctggtggaagacatggaagaaatgtaagctctcggcatggagtaattctcaagtttttaatcttgaagaggcattagagatcaatccataccatgtagaatcccaggaatctgtcgctgagaagcatctggaccttctcgtagtgagtcgggagatatccatgtgggttgcttccggtgtccttgttgctacggccccactcgtaaccgcttggcgtcagcttgtacgcggtcaatgaacaagatcctggggtaaagctgcatgtcaaaatgatgcacttctcaccgtcccattgcttgttgttctccaagatcttggcatgtgatgtcaaatcctgcaataatcaacaaaacgaacagttcagtcttatgactaagttcacaggccaaaattcactcttacaacttttctgttcctttgcaacagcttaaaagagctaaaacataatctaacctgtggtgatagctgaggagcttcatttggttgggtatgcatccatcccagtggctccaaatcattaaggaactcgtgctcgggaaggtttgcaggcagtgtcaccatctgatgagttccgtgctgcggaggaatagctatgcatctgatctctttaacttggggattatcctgtgggctcagcccatacagaaaccctgcaatctgtgtccttaaatctgctatgcatatgaacttctttaatatattctttggcataatgtaagtgtagccagtctcctgtaggtagaatattggagtcagtatcccttcaatgcctgttagttgcaacttaaatggttatcaaagaaaaggaattattgtactgacctttatatcatctgagttaacataaatgtgattgacacgaagatacaagtttgtggcagagatagccctaacacgccaatcagtctttgatgcaaatgcttgttgctcgtatggactggtcgttgtgatgatgagctcatctccatgcacattggtcgtccttgtagtaactgcggtcagctgagtcgtctctctagactgcaaaatcaagtgaaaccaggagtgagtcgatgtgaattagtcattaacaaaaattgaacacggttcctattatgatgagccctacctgtttctcaatttcagcaatctgttgcctctgctgtgatggtggagctatttcagcaccaagtataatgtcacgaatttcagattgtgtcagcgcagacgtattaacattgtttttctttgcataatcagacaggatgaggtccctgagtgcacattcaaccttcagccattgctcatcagtcaaggttggccaaatatgatgtggttccgtaacaatagttttgtcaggcttgagcagcatctttgccttctcattattgacatgaagtgcacgcaatataagcacaatccgagagaaagcagtgaatgatgagatacttttcaaccaatcatcatatatgttgtaaagaaccatctggggttctgtggccttgagaataagatcaccgaacttctcaatcttcaaacaagcttggaatggcagctgcagctcactgcccttgatcacaatgttagggaagtcaagcagatggacctccaaaggatccaacatacccttccttgtcacaatgatttgctttggctgctcttctacaggaagcgaccgaactaatgcagcaacctcttcagctgttttccacttggccagttgtccaagacgcttttgtccagcccatacacttgtgtggatgacctgcatattgcaatccattttcattttaagccttcaaagttgcaacactccacagtaatgtcacaattatgactgtagctagaagagaatgaacataccttcagaaatagttgaccagttcttggattgaaaataaaaatagcaccattgattggtttagtggtcaagttaccctcaaatgttttgtgaatggtaactcgatagacatttgtgtcatccacaaaccatatgatctgattgctgaatatctctccatagttctgtgaagacaaatacggctcagtgggttctgaagaatacagctgtagacccttccttattctctccctcagcacgtacagagcaggatttgactgttatagatgaaaacagtccagcaggttagttatattggaaatactggaacatacagacagatcattatgcaagctaaagatagagtagttacaattaacatgattatattaccttcattatcttgttcattgcttgctgaagaaggggctttgacccagggaaccaattgccaaaagcagagtgcaaattatatgctagatcaattccaatcatcacccctgtagaacaaaataacaattagctacaaacaaatcagacaaatagatagttgataaaacaattcatagatattgaaagcatacctgttggagatggatatatcgacatattgtcagtagtgtagtccatgaacttggcccttgtataacgctcaatgtcatgtgaatcatagtctccccatcgaagttgcacatcaatccaatacttgttgctagctttctgatcaaagacatcctttgactcagagactaagctcggtttagacatctgccacctatgtgcagcaaaaaggaggatatctgcacaggagctgttcatcttgtaactcttcctcggatgtattgtctctttctgcactgtctcaatctccagtgcatccagctcttgatccaaaacttggcaaagatccataacaacactttcatggatcttctgccacagatgcgcacggaagatctggattaaagaaatcttcagggtcggaattttcccatgcatgaaaatgcccgtaagatctagctgaacctggaaaccaacatacacatttgcacgattgatggttggtgaccaccacagggtaaatcttcggttgggtatctgattgagaccagaacgttgtgcattcgtcagcttcttgtatttcatggactcctcaaaacctgacgctttctcccaaaacagaccctcccaagtagggaaatacgttcctttaaacaaggtgtgttccaaaataccctcaacaccaccaagagcttggatgacatcagtcctatagttgtttaggttccatagttttccatcatgtctctgatgtgtccaccagaatggattttgtttgagcacttggtactgcttaaagtctgttctcactctccatcctttatcatatgccaaagtatgacggtctttttggaaaagagtgttgatacgaggaatacctctatcccatgaatcttcaagatcctcaagtgttaaccgtctgttctgtgattgtgcttcctgcctcttcaaagcatactcagcccaaacccgctgtgaatcaataaactcactctcccagggctgaatgtagcgatataagttagggataagctggtcctcttcatggctcataccactccgaaaatgtgtcacaccaacatctgtctgtttgctgtacctgagatcactctgtggtatcagaatgtgacccatcgataacattcccagacctccaatttccttgggtgtatagaagataacaggcggaaacctgctaggcatttttgagttcagtccaatctttatgcgagtctgaatcttgttttcacatttgacaagtaaatccaagagctcctgggtatgaacagttgcttcacggaaatatgtcataagaccaataagagcagtattccacttgttaacaatcttagtgaatgtagttgaccctgaggacataaggatttgcctgacacggttctcaaacactttcatatgctcatcatcaactcttagaaaggcaatagctgtcctttcttttgtctgttcattctgcaagttccagactccatctttggtgttactaaacgcttcttgagtcatccgtatttttggtagtatacgaacctcaaacccacacatgctaaacagcagattagggttgtccttgctgtaaacagagacaaagctgttctcccactctaacgttgtgatgctccttggaaggcggttcttcatgtcccaaaaaacacttcttccaagatttacatcatgcttcatgagcctcattcttgcgtctctaggccaacatttcttgttgttgtaaccgaccatgttctcattattaggatcaggatgctctgtcaaataacgctgaattaaatcacgtgcttcctcatgagtaaagcggaacattatatgcaccttatcaatataccgagagtacaaccggataggatgccttgtctcaactttggtatcagcatatgtgaggaactcattaggcattgtaggtggcccagcgatctcacttgcacgtgttaaaccgagcagaaggagatccagcacaagaccatagtattgcacaacaaatgatgcaaactgtagaccccgaatgagaccataagaattagtatgactcatatccttgtaagacaacacaacattgttctttgcagtgacataatcagcaatattatggtccaagaccaaccgcagaagcctgttcaacagtgtcagatcaattttttcgaagaacttctcaaattttgtctgcagcatcacaacacactgcccgtcactagtgtcccatacatcctgtagattatttataccttggcaccatttgtaaacaagcaaaggaggtggttctgaatcagcaggcttgacccagttcgggaataggtgtcgcttgtccccctcataccacaagtactggtcaaggtaggcatcagtgattttctcaagaggctcaatttcatatactgggatcaggtagctgtacaggtccataaactcaatgccaacttctttaaaagcacgctgagtaagaagatgcctctttatccttgaaagcgcctcatgaggattatcatatgcttgctcaatcaagccaagttcctcccgctgcagttgatttaaccttacagccacgctgtaagactcctttagcctttccagagctagtataagaagtttggtgtcatgcttgtaagaaagtggaggaaaaggaataggcgagaacttccttgattcaagccaatgaactgttgttgtgtaaatagcaactgcctcttcaggtgtaacatatggcccatctttcaaatagttgtgctgcctctcctgttctgccttcagccacaaacgagttaatcttccaagattcttacggcacacagtcttgtcaaccgtagcaccacgcctgatacgctcacgattgtagtgagcaacattggtccaccaatcagccttggactttacataacgaagtatcatgttctcaataggaacaggtaggcccgggaccttccatgggatatttgccttccagcaccgccatgcctcactaagatgctgcagtatagtccgtgccttgttttgcttgataccctcaggcatagcatcaaggacatcatgcataacagcagctcgaagttcaagatcgaagtgagactcaacacgttgtttggttacagttttagcaactccttttgaatgacgaccttcaaactgcctggccagtaaattacctaaccatctttcaagcagtggcacaataccccgcaggaaaaacagccacaccctccacattggagcccaaaatccacagccaggtccttttcctacaggaccagtgttgaacctgtagtatatcaagtgcttcagatctttgcacatcctgatttgccgcatcagacgatacttgtagcggtacataccagtcagctggccaacatgagagaatatgtattgcaagccatctgctaactggaaagcgtcaacatttcccaagcggaactggatgtttgcatcaacaactaacttagtaagtcgtaatatctcacggcataaatgaaatgcatttccaaaccgagattttttcctttccttcgttgtgagtgtcttcacaggtttcaaattgaagttgtagtccaagtgaaggtagttaaggttctttctgtggatcaacaagttcaacatattgtaaccctgtttgcaaacttgcaaacctgcttctgcccagtcaagctctgttgtttgaaaaaactttgtagcttggagtgaacggaacaggtgcttcttcttctgtgccttgggaggcctatgatgtagttcattgagcacataacacttcagtagcttctgatagctgacacgcaccttcactggataagctggtgggctgcaaacgagagattgatgtgattagctttgaaagttcaagtgcatcaggcagaacattggcaaaaggggatcatgaaaaggtataaaggatgtcataatggcactcaccagtgctccttgtaccattcagatacaagagggatatcttcagcacgacgtgttctaccagatctcatattaaaaggctttggagcaaagagtaatgaaatgccagctgctgttgtatcagtgtaaagttctgttcctttcaagaggggctccacaccatccgggagacggaagtcctcatcttcatcctcttcagttgttctcctctcccgacgatcaaccttgttagtcgaagttataggatttatcaaaggatcatagtaaaatgcaggcaagtctggatcctctgttttgatatacattatcattggagtatgatataccccaagcctcactttccttggcctgttattgtacaagtgtggaaaagcaattctgtactcagtcctaagtggttggcggatgatgagtttgttgatgtcattaaactcattccagtcctcatcccccttctccatatcacggtacaatggctcaaacttcggacctcctgcaacatagcatttaatatggtaaaagagcttatgatgcagcaacagcaaaaggtacatgtcacaatctttgtacaaagctaaaaaataacataaaacattccaatgtaacaaattatgtctaccattggatgcccattcaacagttttgaaaatgtttcagtgtaaatattaatcaactgcaagattctcatatggaagcatatataaagctagttgcaaaaaaagaaaaaggaaattcgtgcttacaggagaaggggtgaatagaacagtagagaaggcagattttacatcccaacctgcttgctaattttcaaagccccaagctcacagacatatgtatgcaggaaaacttaattccttctcacactgtcgcccatacaacatgcatcatctaattaataaagccattaactacttcattaccataaatccccatgttacagttacagatgttccataaaaatgaacagctatggacataaactacctcctccatgcttcaaatattgagtaacaattaatgcactaaaatcacgtaaatgcAaaaaaaaaaatgttttggtataaacccatttcttagcacaagctaaatttccacaacattttgccagcagtcagataccaagtggtataaattttgatataaccataagatcaatgctacaactatgctaatcatgtatgacaattaaaggaattaaagtaaaaaaacttagaagttataaaagggaacacaataaggttacctgggatacacatgttgagtgctttggcggtaaagaaagactccatatcaaacaaatagaaataatttcgatcaatcaaatccgacaaaagttggccagcaagacgatagagtgtcgccattatgggaagcgatagatgccatttccggtagctggggccatttataagcttagtcttcacaagcggcttatgatcataaaaccattcatgcacagctgaatcttcctcctcgtccaactccaactgtatagcctccagtggttcaacatccagcaaattatcagcatagtctaatggaggttcctcatcatcaaatggaggaaagcgcattctcttgaaatgtcgcctatctctcttctccctcctcatcatgatccacatcgtgccccactgtggaacacacatgtttgagatggtttaagtacaaaaataagaagtacaaagctaaagatcagattaagttatataatgcctatcaattatgacagatccgtacagtagctattgttcccagaacagggcaaagaagaaaaaaaaagataaggtgttttagatcagtacctgtgcaaggtaaatgggctcaactacccatgggatctcatttacaaaggttattgcaccagtgatatggtaaaggatctttacatgccgaacctgaaaacaagagttccgtcattctattctgtattgccattgtataagtaatctcaccaatagctacttggctagatcaatgttcacatcaaagagtgtcacaataaatatacctgttcccagggcattggcatattttccaatagcttgtaaacagcatgaggcacaaatttgagtgctccaagatatacacgcttatcatgcctgtacttctttgaagacatgtcaccatggtccctgatcagcaataaatagaatcataaataaattgtccgcaacatacacatgaactacagtagttgatggtgaagatgggatatatgacagcaaattcaagcagaacatgtcacttgccaccattcctaataactgaggatcaggcacaaatggcacaaaccccaaccataaagagattcatcttaacagccaagacaattagcaaatcaaaaaaatcaccaccataactagattacacaatatctacaatcataattgagttgggttaattagaaaaaccataacattcccataactatcaaaacttgacttccaatatcccattccaaatgttgtaagaaagcagtttaataggacgtgaacggaactgctgactgcagctgctcgttgctactagcgagagagcagcggctgcaccgatcaggccgattttttttcactctcttcatactccagtaaccatagaacataagcagctgatatcaacagtaacatgatgataaggtaaagcagcagatcacagctaagtccatgcctaaatacttaacacagttacagccataaatttcaaacatcgtatcaaatcatacactagtaacgaaaatagcctcaatcgagagggcaaccacaatcatccccctaggtcctaagctacaaacaactacagcacaaagcaccacaacaccaaaacacatccacaggcaacaactcggcgcggatctggagactttacctgatgattttgcggacgtgctcgggtggcatgtcctccttctgcgcctcaacgaagccgaacttgcgcttgtcgccgtaccgcttggagttcagctggtgccacttcctcgccttctccaccagctgcgcctcgagctccgccgccgtcagcggcttgccgccgccaacgccaccgggcgggcccacggccgccggcggcggcggaggcggagcgcccgtgcccggtggcggcggcgcggcccccatcggcggaggcggcggcggcccgccgctccacatcgtcggcggcgacgggggaagcgggcaggcgcggcggccgctgctgccgcgagggttttagaggtgtcgag
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| CDS seq | atgtggagcggcgggccgccgccgcctccgccgatgggggccgcgccgccgccaccgggcacgggcgctccgcctccgccgccgccggcggccgtgggcccgcccggtggcgttggcggcggcaagccgctgacggcggcggagctcgaggcgcagctggtggagaaggcgaggaagtggcaccagctgaactccaagcggtacggcgacaagcgcaagttcggcttcgttgaggcgcagaaggaggacatgccacccgagcacgtccgcaaaatcatcagggaccatggtgacatgtcttcaaagaagtacaggcatgataagcgtgtatatcttggagcactcaaatttgtgcctcatgctgtttacaagctattggaaaatatgccaatgccctgggaacaggttcggcatgtaaagatcctttaccatatcactggtgcaataacctttgtaaatgagatcccatgggtagttgagcccatttaccttgcacagtggggcacgatgtggatcatgatgaggagggagaagagagataggcgacatttcaagagaatgcgctttcctccatttgatgatgaggaacctccattagactatgctgataatttgctggatgttgaaccactggaggctatacagttggagttggacgaggaggaagattcagctgtgcatgaatggttttatgatcataagccgcttgtgaagactaagcttataaatggccccagctaccggaaatggcatctatcgcttcccataatggcgacactctatcgtcttgctggccaacttttgtcggatttgattgatcgaaattatttctatttgtttgatatggagtctttctttaccgccaaagcactcaacatgtgtatcccaggaggtccgaagtttgagccattgtaccgtgatatggagaagggggatgaggactggaatgagtttaatgacatcaacaaactcatcatccgccaaccacttaggactgagtacagaattgcttttccacacttgtacaataacaggccaaggaaagtgaggcttggggtatatcatactccaatgataatgtatatcaaaacagaggatccagacttgcctgcattttactatgatcctttgataaatcctataacttcgactaacaaggttgatcgtcgggagaggagaacaactgaagaggatgaagatgaggacttccgtctcccggatggtgtggagcccctcttgaaaggaacagaactttacactgatacaacagcagctggcatttcattactctttgctccaaagccttttaatatgagatctggtagaacacgtcgtgctgaagatatccctcttgtatctgaatggtacaaggagcactgcccaccagcttatccagtgaaggtgcgtgtcagctatcagaagctactgaagtgttatgtgctcaatgaactacatcataggcctcccaaggcacagaagaagaagcacctgttccgttcactccaagctacaaagttttttcaaacaacagagcttgactgggcagaagcaggtttgcaagtttgcaaacagggttacaatatgttgaacttgttgatccacagaaagaaccttaactaccttcacttggactacaacttcaatttgaaacctgtgaagacactcacaacgaaggaaaggaaaaaatctcggtttggaaatgcatttcatttatgccgtgagatattacgacttactaagttagttgttgatgcaaacatccagttccgcttgggaaatgttgacgctttccagttagcagatggcttgcaatacatattctctcatgttggccagctgactggtatgtaccgctacaagtatcgtctgatgcggcaaatcaggatgtgcaaagatctgaagcacttgatatactacaggttcaacactggtcctgtaggaaaaggacctggctgtggattttgggctccaatgtggagggtgtggctgtttttcctgcggggtattgtgccactgcttgaaagatggttaggtaatttactggccaggcagtttgaaggtcgtcattcaaaaggagttgctaaaactgtaaccaaacaacgtgttgagtctcacttcgatcttgaacttcgagctgctgttatgcatgatgtccttgatgctatgcctgagggtatcaagcaaaacaaggcacggactatactgcagcatcttagtgaggcatggcggtgctggaaggcaaatatcccatggaaggtcccgggcctacctgttcctattgagaacatgatacttcgttatgtaaagtccaaggctgattggtggaccaatgttgctcactacaatcgtgagcgtatcaggcgtggtgctacggttgacaagactgtgtgccgtaagaatcttggaagattaactcgtttgtggctgaaggcagaacaggagaggcagcacaactatttgaaagatgggccatatgttacacctgaagaggcagttgctatttacacaacaacagttcattggcttgaatcaaggaagttctcgcctattccttttcctccactttcttacaagcatgacaccaaacttcttatactagctctggaaaggctaaaggagtcttacagcgtggctgtaaggttaaatcaactgcagcgggaggaacttggcttgattgagcaagcatatgataatcctcatgaggcgctttcaaggataaagaggcatcttcttactcagcgtgcttttaaagaagttggcattgagtttatggacctgtacagctacctgatcccagtatatgaaattgagcctcttgagaaaatcactgatgcctaccttgaccagtacttgtggtatgagggggacaagcgacacctattcccgaactgggtcaagcctgctgattcagaaccacctcctttgcttgtttacaaatggtgccaaggtataaataatctacaggatgtatgggacactagtgacgggcagtgtgttgtgatgctgcagacaaaatttgagaagttcttcgaaaaaattgatctgacactgttgaacaggcttctgcggttggtcttggaccataatattgctgattatgtcactgcaaagaacaatgttgtgttgtcttacaaggatatgagtcatactaattcttatggtctcattcggggtctacagtttgcatcatttgttgtgcaatactatggtcttgtgctggatctccttctgctcggtttaacacgtgcaagtgagatcgctgggccacctacaatgcctaatgagttcctcacatatgctgataccaaagttgagacaaggcatcctatccggttgtactctcggtatattgataaggtgcatataatgttccgctttactcatgaggaagcacgtgatttaattcagcgttatttgacagagcatcctgatcctaataatgagaacatggtcggttacaacaacaagaaatgttggcctagagacgcaagaatgaggctcatgaagcatgatgtaaatcttggaagaagtgttttttgggacatgaagaaccgccttccaaggagcatcacaacgttagagtgggagaacagctttgtctctgtttacagcaaggacaaccctaatctgctgtttagcatgtgtgggtttgaggttcgtatactaccaaaaatacggatgactcaagaagcgtttagtaacaccaaagatggagtctggaacttgcagaatgaacagacaaaagaaaggacagctattgcctttctaagagttgatgatgagcatatgaaagtgtttgagaaccgtgtcaggcaaatccttatgtcctcagggtcaactacattcactaagattgttaacaagtggaatactgctcttattggtcttatgacatatttccgtgaagcaactgttcatacccaggagctcttggatttacttgtcaaatgtgaaaacaagattcagactcgcataaagattggactgaactcaaaaatgcctagcaggtttccgcctgttatcttctatacacccaaggaaattggaggtctgggaatgttatcgatgggtcacattctgataccacagagtgatctcaggtacagcaaacagacagatgttggtgtgacacattttcggagtggtatgagccatgaagaggaccagcttatccctaacttatatcgctacattcagccctgggagagtgagtttattgattcacagcgggtttgggctgagtatgctttgaagaggcaggaagcacaatcacagaacagacggttaacacttgaggatcttgaagattcatgggatagaggtattcctcgtatcaacactcttttccaaaaagaccgtcatactttggcatatgataaaggatggagagtgagaacagactttaagcagtaccaagtgctcaaacaaaatccattctggtggacacatcagagacatgatggaaaactatggaacctaaacaactataggactgatgtcatccaagctcttggtggtgttgagggtattttggaacacaccttgtttaaaggaacgtatttccctacttgggagggtctgttttgggagaaagcgtcaggttttgaggagtccatgaaatacaagaagctgacgaatgcacaacgttctggtctcaatcagatacccaaccgaagatttaccctgtggtggtcaccaaccatcaatcgtgcaaatgtgtatgttggtttccaggttcagctagatcttacgggcattttcatgcatgggaaaattccgaccctgaagatttctttaatccagatcttccgtgcgcatctgtggcagaagatccatgaaagtgttgttatggatctttgccaagttttggatcaagagctggatgcactggagattgagacagtgcagaaagagacaatacatccgaggaagagttacaagatgaacagctcctgtgcagatatcctcctttttgctgcacataggtggcagatgtctaaaccgagcttagtctctgagtcaaaggatgtctttgatcagaaagctagcaacaagtattggattgatgtgcaacttcgatggggagactatgattcacatgacattgagcgttatacaagggccaagttcatggactacactactgacaatatgtcgatatatccatctccaacaggggtgatgattggaattgatctagcatataatttgcactctgcttttggcaattggttccctgggtcaaagccccttcttcagcaagcaatgaacaagataatgaagtcaaatcctgctctgtacgtgctgagggagagaataaggaagggtctacagctgtattcttcagaacccactgagccgtatttgtcttcacagaactatggagagatattcagcaatcagatcatatggtttgtggatgacacaaatgtctatcgagttaccattcacaaaacatttgagggtaacttgaccactaaaccaatcaatggtgctatttttattttcaatccaagaactggtcaactatttctgaaggtcatccacacaagtgtatgggctggacaaaagcgtcttggacaactggccaagtggaaaacagctgaagaggttgctgcattagttcggtcgcttcctgtagaagagcagccaaagcaaatcattgtgacaaggaagggtatgttggatcctttggaggtccatctgcttgacttccctaacattgtgatcaagggcagtgagctgcagctgccattccaagcttgtttgaagattgagaagttcggtgatcttattctcaaggccacagaaccccagatggttctttacaacatatatgatgattggttgaaaagtatctcatcattcactgctttctctcggattgtgcttatattgcgtgcacttcatgtcaataatgagaaggcaaagatgctgctcaagcctgacaaaactattgttacggaaccacatcatatttggccaaccttgactgatgagcaatggctgaaggttgaatgtgcactcagggacctcatcctgtctgattatgcaaagaaaaacaatgttaatacgtctgcgctgacacaatctgaaattcgtgacattatacttggtgctgaaatagctccaccatcacagcagaggcaacagattgctgaaattgagaaacagtctagagagacgactcagctgaccgcagttactacaaggacgaccaatgtgcatggagatgagctcatcatcacaacgaccagtccatacgagcaacaagcatttgcatcaaagactgattggcgtgttagggctatctctgccacaaacttgtatcttcgtgtcaatcacatttatgttaactcagatgatataaaggagactggctacacttacattatgccaaagaatatattaaagaagttcatatgcatagcagatttaaggacacagattgcagggtttctgtatgggctgagcccacaggataatccccaagttaaagagatcagatgcatagctattcctccgcagcacggaactcatcagatggtgacactgcctgcaaaccttcccgagcacgagttccttaatgatttggagccactgggatggatgcatacccaaccaaatgaagctcctcagctatcaccacaggatttgacatcacatgccaagatcttggagaacaacaagcaatgggacggtgagaagtgcatcattttgacatgcagctttaccccaggatcttgttcattgaccgcgtacaagctgacgccaagcggttacgagtggggccgtagcaacaaggacaccggaagcaacccacatggatatctcccgactcactacgagaaggtccagatgcttctcagcgacagattcctgggattctacatggtgccggataacaccccttggaacttcaacttcatgggagtcaagcacgacccgctgatgaagtacaacatgaagcttggcacgccccgggacttctatcacgaggaccatcggccgacgcatttcctcgagttcagcaacatcgacgagggcgaggtcgcagaaggtgatagggaggacaccttcacgtaa
More
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| Protein seq | MWSGGPPPPPPMGAAPPPPGTGAPPPPPPAAVGPPGGVGGGKPLTAAELEAQLVEKARKWHQLNSKRYGDKRKFGFVEAQKEDMPPEHVRKIIRDHGDMSSKKYRHDKRVYLGALKFVPHAVYKLLENMPMPWEQVRHVKILYHITGAITFVNEIPWVVEPIYLAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNLLDVEPLEAIQLELDEEEDSAVHEWFYDHKPLVKTKLINGPSYRKWHLSLPIMATLYRLAGQLLSDLIDRNYFYLFDMESFFTAKALNMCIPGGPKFEPLYRDMEKGDEDWNEFNDINKLIIRQPLRTEYRIAFPHLYNNRPRKVRLGVYHTPMIMYIKTEDPDLPAFYYDPLINPITSTNKVDRRERRTTEEDEDEDFRLPDGVEPLLKGTELYTDTTAAGISLLFAPKPFNMRSGRTRRAEDIPLVSEWYKEHCPPAYPVKVRVSYQKLLKCYVLNELHHRPPKAQKKKHLFRSLQATKFFQTTELDWAEAGLQVCKQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLVVDANIQFRLGNVDAFQLADGLQYIFSHVGQLTGMYRYKYRLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPMWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDVLDAMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPVPIENMILRYVKSKADWWTNVAHYNRERIRRGATVDKTVCRKNLGRLTRLWLKAEQERQHNYLKDGPYVTPEEAVAIYTTTVHWLESRKFSPIPFPPLSYKHDTKLLILALERLKESYSVAVRLNQLQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSYLIPVYEIEPLEKITDAYLDQYLWYEGDKRHLFPNWVKPADSEPPPLLVYKWCQGINNLQDVWDTSDGQCVVMLQTKFEKFFEKIDLTLLNRLLRLVLDHNIADYVTAKNNVVLSYKDMSHTNSYGLIRGLQFASFVVQYYGLVLDLLLLGLTRASEIAGPPTMPNEFLTYADTKVETRHPIRLYSRYIDKVHIMFRFTHEEARDLIQRYLTEHPDPNNENMVGYNNKKCWPRDARMRLMKHDVNLGRSVFWDMKNRLPRSITTLEWENSFVSVYSKDNPNLLFSMCGFEVRILPKIRMTQEAFSNTKDGVWNLQNEQTKERTAIAFLRVDDEHMKVFENRVRQILMSSGSTTFTKIVNKWNTALIGLMTYFREATVHTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVIFYTPKEIGGLGMLSMGHILIPQSDLRYSKQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAQSQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVLDQELDALEIETVQKETIHPRKSYKMNSSCADILLFAAHRWQMSKPSLVSESKDVFDQKASNKYWIDVQLRWGDYDSHDIERYTRAKFMDYTTDNMSIYPSPTGVMIGIDLAYNLHSAFGNWFPGSKPLLQQAMNKIMKSNPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGEIFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKVIHTSVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKIEKFGDLILKATEPQMVLYNIYDDWLKSISSFTAFSRIVLILRALHVNNEKAKMLLKPDKTIVTEPHHIWPTLTDEQWLKVECALRDLILSDYAKKNNVNTSALTQSEIRDIILGAEIAPPSQQRQQIAEIEKQSRETTQLTAVTTRTTNVHGDELIITTTSPYEQQAFASKTDWRVRAISATNLYLRVNHIYVNSDDIKETGYTYIMPKNILKKFICIADLRTQIAGFLYGLSPQDNPQVKEIRCIAIPPQHGTHQMVTLPANLPEHEFLNDLEPLGWMHTQPNEAPQLSPQDLTSHAKILENNKQWDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGRSNKDTGSNPHGYLPTHYEKVQMLLSDRFLGFYMVPDNTPWNFNFMGVKHDPLMKYNMKLGTPRDFYHEDHRPTHFLEFSNIDEGEVAEGDREDTFT |
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| Function | Pre-mRNA-processing-splicing factor 8A [UniProtKB/Swiss-Prot:Q9SSD2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_06g0004960 | OsLima_06g0004960.02 | Chr06 | 3509085 | 3519013 | - | NAM | ||
| CDS seq | atgtggagcggcgggccgccgccgcctccgccgatgggggccgcgccgccgccaccgggcacgggcgctccgcctccgccgccgccggcggccgtgggcccgcccggtggcgttggcggcggcaagccgctgacggcggcggagctcgaggcgcagctggtggagaaggcgaggaagtggcaccagctgaactccaagcggtacggcgacaagcgcaagttcggcttcgttgaggcgcagaaggaggacatgccacccgagcacgtccgcaaaatcatcagggaccatggtgacatgtcttcaaagaagtacaggcatgataagcgtgtatatcttggagcactcaaatttgtgcctcatgctgtttacaagctattggaaaatatgccaatgccctgggaacaggttcggcatgtaaagatcctttaccatatcactggtgcaataacctttgtaaatgagatcccatgggtagttgagcccatttaccttgcacagtggggcacgatgtggatcatgatgaggagggagaagagagataggcgacatttcaagagaatgcgctttcctccatttgatgatgaggaacctccattagactatgctgataatttgctggatgttgaaccactggaggctatacagttggagttggacgaggaggaagattcagctgtgcatgaatggttttatgatcataagccgcttgtgaagactaagcttataaatggccccagctaccggaaatggcatctatcgcttcccataatggcgacactctatcgtcttgctggccaacttttgtcggatttgattgatcgaaattatttctatttgtttgatatggagtctttctttaccgccaaagcactcaacatgtgtatcccaggaggtccgaagtttgagccattgtaccgtgatatggagaagggggatgaggactggaatgagtttaatgacatcaacaaactcatcatccgccaaccacttaggactgagtacagaattgcttttccacacttgtacaataacaggccaaggaaagtgaggcttggggtatatcatactccaatgataatgtatatcaaaacagaggatccagacttgcctgcattttactatgatcctttgataaatcctataacttcgactaacaaggttgatcgtcgggagaggagaacaactgaagaggatgaagatgaggacttccgtctcccggatggtgtggagcccctcttgaaaggaacagaactttacactgatacaacagcagctggcatttcattactctttgctccaaagccttttaatatgagatctggtagaacacgtcgtgctgaagatatccctcttgtatctgaatggtacaaggagcactgcccaccagcttatccagtgaaggtgcgtgtcagctatcagaagctactgaagtgttatgtgctcaatgaactacatcataggcctcccaaggcacagaagaagaagcacctgttccgttcactccaagctacaaagttttttcaaacaacagagcttgactgggcagaagcaggtttgcaagtttgcaaacagggttacaatatgttgaacttgttgatccacagaaagaaccttaactaccttcacttggactacaacttcaatttgaaacctgtgaagacactcacaacgaaggaaaggaaaaaatctcggtttggaaatgcatttcatttatgccgtgagatattacgacttactaagttagttgttgatgcaaacatccagttccgcttgggaaatgttgacgctttccagttagcagatggcttgcaatacatattctctcatgttggccagctgactggtatgtaccgctacaagtatcgtctgatgcggcaaatcaggatgtgcaaagatctgaagcacttgatatactacaggttcaacactggtcctgtaggaaaaggacctggctgtggattttgggctccaatgtggagggtgtggctgtttttcctgcggggtattgtgccactgcttgaaagatggttaggtaatttactggccaggcagtttgaaggtcgtcattcaaaaggagttgctaaaactgtaaccaaacaacgtgttgagtctcacttcgatcttgaacttcgagctgctgttatgcatgatgtccttgatgctatgcctgagggtatcaagcaaaacaaggcacggactatactgcagcatcttagtgaggcatggcggtgctggaaggcaaatatcccatggaaggtcccgggcctacctgttcctattgagaacatgatacttcgttatgtaaagtccaaggctgattggtggaccaatgttgctcactacaatcgtgagcgtatcaggcgtggtgctacggttgacaagactgtgtgccgtaagaatcttggaagattaactcgtttgtggctgaaggcagaacaggagaggcagcacaactatttgaaagatgggccatatgttacacctgaagaggcagttgctatttacacaacaacagttcattggcttgaatcaaggaagttctcgcctattccttttcctccactttcttacaagcatgacaccaaacttcttatactagctctggaaaggctaaaggagtcttacagcgtggctgtaaggttaaatcaactgcagcgggaggaacttggcttgattgagcaagcatatgataatcctcatgaggcgctttcaaggataaagaggcatcttcttactcagcgtgcttttaaagaagttggcattgagtttatggacctgtacagctacctgatcccagtatatgaaattgagcctcttgagaaaatcactgatgcctaccttgaccagtacttgtggtatgagggggacaagcgacacctattcccgaactgggtcaagcctgctgattcagaaccacctcctttgcttgtttacaaatggtgccaaggtataaataatctacaggatgtatgggacactagtgacgggcagtgtgttgtgatgctgcagacaaaatttgagaagttcttcgaaaaaattgatctgacactgttgaacaggcttctgcggttggtcttggaccataatattgctgattatgtcactgcaaagaacaatgttgtgttgtcttacaaggatatgagtcatactaattcttatggtctcattcggggtctacagtttgcatcatttgttgtgcaatactatggtcttgtgctggatctccttctgctcggtttaacacgtgcaagtgagatcgctgggccacctacaatgcctaatgagttcctcacatatgctgataccaaagttgagacaaggcatcctatccggttgtactctcggtatattgataaggtgcatataatgttccgctttactcatgaggaagcacgtgatttaattcagcgttatttgacagagcatcctgatcctaataatgagaacatggtcggttacaacaacaagaaatgttggcctagagacgcaagaatgaggctcatgaagcatgatgtaaatcttggaagaagtgttttttgggacatgaagaaccgccttccaaggagcatcacaacgttagagtgggagaacagctttgtctctgtttacagcaaggacaaccctaatctgctgtttagcatgtgtgggtttgaggttcgtatactaccaaaaatacggatgactcaagaagcgtttagtaacaccaaagatggagtctggaacttgcagaatgaacagacaaaagaaaggacagctattgcctttctaagagttgatgatgagcatatgaaagtgtttgagaaccgtgtcaggcaaatccttatgtcctcagggtcaactacattcactaagattgttaacaagtggaatactgctcttattggtcttatgacatatttccgtgaagcaactgttcatacccaggagctcttggatttacttgtcaaatgtgaaaacaagattcagactcgcataaagattggactgaactcaaaaatgcctagcaggtttccgcctgttatcttctatacacccaaggaaattggaggtctgggaatgttatcgatgggtcacattctgataccacagagtgatctcaggtacagcaaacagacagatgttggtgtgacacattttcggagtggtatgagccatgaagaggaccagcttatccctaacttatatcgctacattcagccctgggagagtgagtttattgattcacagcgggtttgggctgagtatgctttgaagaggcaggaagcacaatcacagaacagacggttaacacttgaggatcttgaagattcatgggatagaggtattcctcgtatcaacactcttttccaaaaagaccgtcatactttggcatatgataaaggatggagagtgagaacagactttaagcagtaccaagtgctcaaacaaaatccattctggtggacacatcagagacatgatggaaaactatggaacctaaacaactataggactgatgtcatccaagctcttggtggtgttgagggtattttggaacacaccttgtttaaaggaacgtatttccctacttgggagggtctgttttgggagaaagcgtcaggttttgaggagtccatgaaatacaagaagctgacgaatgcacaacgttctggtctcaatcagatacccaaccgaagatttaccctgtggtggtcaccaaccatcaatcgtgcaaatgtgtatgttggtttccaggttcagctagatcttacgggcattttcatgcatgggaaaattccgaccctgaagatttctttaatccagatcttccgtgcgcatctgtggcagaagatccatgaaagtgttgttatggatctttgccaagttttggatcaagagctggatgcactggagattgagacagtgcagaaagagacaatacatccgaggaagagttacaagatgaacagctcctgtgcagatatcctcctttttgctgcacataggtggcagatgtctaaaccgagcttagtctctgagtcaaaggatgtctttgatcagaaagctagcaacaagtattggattgatgtgcaacttcgatggggagactatgattcacatgacattgagcgttatacaagggccaagttcatggactacactactgacaatatgtcgatatatccatctccaacaggggtgatgattggaattgatctagcatataatttgcactctgcttttggcaattggttccctgggtcaaagccccttcttcagcaagcaatgaacaagataatgaagtcaaatcctgctctgtacgtgctgagggagagaataaggaagggtctacagctgtattcttcagaacccactgagccgtatttgtcttcacagaactatggagagatattcagcaatcagatcatatggtttgtggatgacacaaatgtctatcgagttaccattcacaaaacatttgagggtaacttgaccactaaaccaatcaatggtgctatttttattttcaatccaagaactggtcaactatttctgaaggtcatccacacaagtgtatgggctggacaaaagcgtcttggacaactggccaagtggaaaacagctgaagaggttgctgcattagttcggtcgcttcctgtagaagagcagccaaagcaaatcattgtgacaaggaagggtatgttggatcctttggaggtccatctgcttgacttccctaacattgtgatcaagggcagtgagctgcagctgccattccaagcttgtttgaagattgagaagttcggtgatcttattctcaaggccacagaaccccagatggttctttacaacatatatgatgattggttgaaaagtatctcatcattcactgctttctctcggattgtgcttatattgcgtgcacttcatgtcaataatgagaaggcaaagatgctgctcaagcctgacaaaactattgttacggaaccacatcatatttggccaaccttgactgatgagcaatggctgaaggttgaatgtgcactcagggacctcatcctgtctgattatgcaaagaaaaacaatgttaatacgtctgcgctgacacaatctgaaattcgtgacattatacttggtgctgaaatagctccaccatcacagcagaggcaacagattgctgaaattgagaaacagtctagagagacgactcagctgaccgcagttactacaaggacgaccaatgtgcatggagatgagctcatcatcacaacgaccagtccatacgagcaacaagcatttgcatcaaagactgattggcgtgttagggctatctctgccacaaacttgtatcttcgtgtcaatcacatttatgttaactcagatgatataaaggagactggctacacttacattatgccaaagaatatattaaagaagttcatatgcatagcagatttaaggacacagattgcagggtttctgtatgggctgagcccacaggataatccccaagttaaagagatcagatgcatagctattcctccgcagcacggaactcatcagatggtgacactgcctgcaaaccttcccgagcacgagttccttaatgatttggagccactgggatggatgcatacccaaccaaatgaagctcctcagctatcaccacaggatttgacatcacatgccaagatcttggagaacaacaagcaatgggacggtgagaagtgcatcattttgacatgcagctttaccccaggatcttgttcattgaccgcgtacaagctgacgccaagcggttacgagtggggccgtagcaacaaggacaccggaagcaacccacatggatatctcccgactcactacgagaaggtccagatgcttctcagcgacagattcctgggattctacatggtgccggataacaccccttggaacttcaacttcatgggagtcaagcacgacccgctgatgaagtacaacatgaagcttggcacgccccgggacttctatcacgaggaccatcggccgacgcatttcctcgagttcagcaacatcgacgagggcgaggtcgcagaaggtgatagggaggacaccttcacgtaa
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| Protein seq | MWSGGPPPPPPMGAAPPPPGTGAPPPPPPAAVGPPGGVGGGKPLTAAELEAQLVEKARKWHQLNSKRYGDKRKFGFVEAQKEDMPPEHVRKIIRDHGDMSSKKYRHDKRVYLGALKFVPHAVYKLLENMPMPWEQVRHVKILYHITGAITFVNEIPWVVEPIYLAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNLLDVEPLEAIQLELDEEEDSAVHEWFYDHKPLVKTKLINGPSYRKWHLSLPIMATLYRLAGQLLSDLIDRNYFYLFDMESFFTAKALNMCIPGGPKFEPLYRDMEKGDEDWNEFNDINKLIIRQPLRTEYRIAFPHLYNNRPRKVRLGVYHTPMIMYIKTEDPDLPAFYYDPLINPITSTNKVDRRERRTTEEDEDEDFRLPDGVEPLLKGTELYTDTTAAGISLLFAPKPFNMRSGRTRRAEDIPLVSEWYKEHCPPAYPVKVRVSYQKLLKCYVLNELHHRPPKAQKKKHLFRSLQATKFFQTTELDWAEAGLQVCKQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLVVDANIQFRLGNVDAFQLADGLQYIFSHVGQLTGMYRYKYRLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPMWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDVLDAMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPVPIENMILRYVKSKADWWTNVAHYNRERIRRGATVDKTVCRKNLGRLTRLWLKAEQERQHNYLKDGPYVTPEEAVAIYTTTVHWLESRKFSPIPFPPLSYKHDTKLLILALERLKESYSVAVRLNQLQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSYLIPVYEIEPLEKITDAYLDQYLWYEGDKRHLFPNWVKPADSEPPPLLVYKWCQGINNLQDVWDTSDGQCVVMLQTKFEKFFEKIDLTLLNRLLRLVLDHNIADYVTAKNNVVLSYKDMSHTNSYGLIRGLQFASFVVQYYGLVLDLLLLGLTRASEIAGPPTMPNEFLTYADTKVETRHPIRLYSRYIDKVHIMFRFTHEEARDLIQRYLTEHPDPNNENMVGYNNKKCWPRDARMRLMKHDVNLGRSVFWDMKNRLPRSITTLEWENSFVSVYSKDNPNLLFSMCGFEVRILPKIRMTQEAFSNTKDGVWNLQNEQTKERTAIAFLRVDDEHMKVFENRVRQILMSSGSTTFTKIVNKWNTALIGLMTYFREATVHTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVIFYTPKEIGGLGMLSMGHILIPQSDLRYSKQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAQSQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVLDQELDALEIETVQKETIHPRKSYKMNSSCADILLFAAHRWQMSKPSLVSESKDVFDQKASNKYWIDVQLRWGDYDSHDIERYTRAKFMDYTTDNMSIYPSPTGVMIGIDLAYNLHSAFGNWFPGSKPLLQQAMNKIMKSNPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGEIFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKVIHTSVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKIEKFGDLILKATEPQMVLYNIYDDWLKSISSFTAFSRIVLILRALHVNNEKAKMLLKPDKTIVTEPHHIWPTLTDEQWLKVECALRDLILSDYAKKNNVNTSALTQSEIRDIILGAEIAPPSQQRQQIAEIEKQSRETTQLTAVTTRTTNVHGDELIITTTSPYEQQAFASKTDWRVRAISATNLYLRVNHIYVNSDDIKETGYTYIMPKNILKKFICIADLRTQIAGFLYGLSPQDNPQVKEIRCIAIPPQHGTHQMVTLPANLPEHEFLNDLEPLGWMHTQPNEAPQLSPQDLTSHAKILENNKQWDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGRSNKDTGSNPHGYLPTHYEKVQMLLSDRFLGFYMVPDNTPWNFNFMGVKHDPLMKYNMKLGTPRDFYHEDHRPTHFLEFSNIDEGEVAEGDREDTFT
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_06g0004960 | OsLima_06g0004960.01 | Chr06 | 3508980 | 3519013 | - | NAM | ||
| CDS seq | atgtggagcggcgggccgccgccgcctccgccgatgggggccgcgccgccgccaccgggcacgggcgctccgcctccgccgccgccggcggccgtgggcccgcccggtggcgttggcggcggcaagccgctgacggcggcggagctcgaggcgcagctggtggagaaggcgaggaagtggcaccagctgaactccaagcggtacggcgacaagcgcaagttcggcttcgttgaggcgcagaaggaggacatgccacccgagcacgtccgcaaaatcatcagggaccatggtgacatgtcttcaaagaagtacaggcatgataagcgtgtatatcttggagcactcaaatttgtgcctcatgctgtttacaagctattggaaaatatgccaatgccctgggaacaggttcggcatgtaaagatcctttaccatatcactggtgcaataacctttgtaaatgagatcccatgggtagttgagcccatttaccttgcacagtggggcacgatgtggatcatgatgaggagggagaagagagataggcgacatttcaagagaatgcgctttcctccatttgatgatgaggaacctccattagactatgctgataatttgctggatgttgaaccactggaggctatacagttggagttggacgaggaggaagattcagctgtgcatgaatggttttatgatcataagccgcttgtgaagactaagcttataaatggccccagctaccggaaatggcatctatcgcttcccataatggcgacactctatcgtcttgctggccaacttttgtcggatttgattgatcgaaattatttctatttgtttgatatggagtctttctttaccgccaaagcactcaacatgtgtatcccaggaggtccgaagtttgagccattgtaccgtgatatggagaagggggatgaggactggaatgagtttaatgacatcaacaaactcatcatccgccaaccacttaggactgagtacagaattgcttttccacacttgtacaataacaggccaaggaaagtgaggcttggggtatatcatactccaatgataatgtatatcaaaacagaggatccagacttgcctgcattttactatgatcctttgataaatcctataacttcgactaacaaggttgatcgtcgggagaggagaacaactgaagaggatgaagatgaggacttccgtctcccggatggtgtggagcccctcttgaaaggaacagaactttacactgatacaacagcagctggcatttcattactctttgctccaaagccttttaatatgagatctggtagaacacgtcgtgctgaagatatccctcttgtatctgaatggtacaaggagcactgcccaccagcttatccagtgaaggtgcgtgtcagctatcagaagctactgaagtgttatgtgctcaatgaactacatcataggcctcccaaggcacagaagaagaagcacctgttccgttcactccaagctacaaagttttttcaaacaacagagcttgactgggcagaagcaggtttgcaagtttgcaaacagggttacaatatgttgaacttgttgatccacagaaagaaccttaactaccttcacttggactacaacttcaatttgaaacctgtgaagacactcacaacgaaggaaaggaaaaaatctcggtttggaaatgcatttcatttatgccgtgagatattacgacttactaagttagttgttgatgcaaacatccagttccgcttgggaaatgttgacgctttccagttagcagatggcttgcaatacatattctctcatgttggccagctgactggtatgtaccgctacaagtatcgtctgatgcggcaaatcaggatgtgcaaagatctgaagcacttgatatactacaggttcaacactggtcctgtaggaaaaggacctggctgtggattttgggctccaatgtggagggtgtggctgtttttcctgcggggtattgtgccactgcttgaaagatggttaggtaatttactggccaggcagtttgaaggtcgtcattcaaaaggagttgctaaaactgtaaccaaacaacgtgttgagtctcacttcgatcttgaacttcgagctgctgttatgcatgatgtccttgatgctatgcctgagggtatcaagcaaaacaaggcacggactatactgcagcatcttagtgaggcatggcggtgctggaaggcaaatatcccatggaaggtcccgggcctacctgttcctattgagaacatgatacttcgttatgtaaagtccaaggctgattggtggaccaatgttgctcactacaatcgtgagcgtatcaggcgtggtgctacggttgacaagactgtgtgccgtaagaatcttggaagattaactcgtttgtggctgaaggcagaacaggagaggcagcacaactatttgaaagatgggccatatgttacacctgaagaggcagttgctatttacacaacaacagttcattggcttgaatcaaggaagttctcgcctattccttttcctccactttcttacaagcatgacaccaaacttcttatactagctctggaaaggctaaaggagtcttacagcgtggctgtaaggttaaatcaactgcagcgggaggaacttggcttgattgagcaagcatatgataatcctcatgaggcgctttcaaggataaagaggcatcttcttactcagcgtgcttttaaagaagttggcattgagtttatggacctgtacagctacctgatcccagtatatgaaattgagcctcttgagaaaatcactgatgcctaccttgaccagtacttgtggtatgagggggacaagcgacacctattcccgaactgggtcaagcctgctgattcagaaccacctcctttgcttgtttacaaatggtgccaaggtataaataatctacaggatgtatgggacactagtgacgggcagtgtgttgtgatgctgcagacaaaatttgagaagttcttcgaaaaaattgatctgacactgttgaacaggcttctgcggttggtcttggaccataatattgctgattatgtcactgcaaagaacaatgttgtgttgtcttacaaggatatgagtcatactaattcttatggtctcattcggggtctacagtttgcatcatttgttgtgcaatactatggtcttgtgctggatctccttctgctcggtttaacacgtgcaagtgagatcgctgggccacctacaatgcctaatgagttcctcacatatgctgataccaaagttgagacaaggcatcctatccggttgtactctcggtatattgataaggtgcatataatgttccgctttactcatgaggaagcacgtgatttaattcagcgttatttgacagagcatcctgatcctaataatgagaacatggtcggttacaacaacaagaaatgttggcctagagacgcaagaatgaggctcatgaagcatgatgtaaatcttggaagaagtgttttttgggacatgaagaaccgccttccaaggagcatcacaacgttagagtgggagaacagctttgtctctgtttacagcaaggacaaccctaatctgctgtttagcatgtgtgggtttgaggttcgtatactaccaaaaatacggatgactcaagaagcgtttagtaacaccaaagatggagtctggaacttgcagaatgaacagacaaaagaaaggacagctattgcctttctaagagttgatgatgagcatatgaaagtgtttgagaaccgtgtcaggcaaatccttatgtcctcagggtcaactacattcactaagattgttaacaagtggaatactgctcttattggtcttatgacatatttccgtgaagcaactgttcatacccaggagctcttggatttacttgtcaaatgtgaaaacaagattcagactcgcataaagattggactgaactcaaaaatgcctagcaggtttccgcctgttatcttctatacacccaaggaaattggaggtctgggaatgttatcgatgggtcacattctgataccacagagtgatctcaggtacagcaaacagacagatgttggtgtgacacattttcggagtggtatgagccatgaagaggaccagcttatccctaacttatatcgctacattcagccctgggagagtgagtttattgattcacagcgggtttgggctgagtatgctttgaagaggcaggaagcacaatcacagaacagacggttaacacttgaggatcttgaagattcatgggatagaggtattcctcgtatcaacactcttttccaaaaagaccgtcatactttggcatatgataaaggatggagagtgagaacagactttaagcagtaccaagtgctcaaacaaaatccattctggtggacacatcagagacatgatggaaaactatggaacctaaacaactataggactgatgtcatccaagctcttggtggtgttgagggtattttggaacacaccttgtttaaaggaacgtatttccctacttgggagggtctgttttgggagaaagcgtcaggttttgaggagtccatgaaatacaagaagctgacgaatgcacaacgttctggtctcaatcagatacccaaccgaagatttaccctgtggtggtcaccaaccatcaatcgtgcaaatgtgtatgttggtttccaggttcagctagatcttacgggcattttcatgcatgggaaaattccgaccctgaagatttctttaatccagatcttccgtgcgcatctgtggcagaagatccatgaaagtgttgttatggatctttgccaagttttggatcaagagctggatgcactggagattgagacagtgcagaaagagacaatacatccgaggaagagttacaagatgaacagctcctgtgcagatatcctcctttttgctgcacataggtggcagatgtctaaaccgagcttagtctctgagtcaaaggatgtctttgatcagaaagctagcaacaagtattggattgatgtgcaacttcgatggggagactatgattcacatgacattgagcgttatacaagggccaagttcatggactacactactgacaatatgtcgatatatccatctccaacaggggtgatgattggaattgatctagcatataatttgcactctgcttttggcaattggttccctgggtcaaagccccttcttcagcaagcaatgaacaagataatgaagtcaaatcctgctctgtacgtgctgagggagagaataaggaagggtctacagctgtattcttcagaacccactgagccgtatttgtcttcacagaactatggagagatattcagcaatcagatcatatggtttgtggatgacacaaatgtctatcgagttaccattcacaaaacatttgagggtaacttgaccactaaaccaatcaatggtgctatttttattttcaatccaagaactggtcaactatttctgaaggtcatccacacaagtgtatgggctggacaaaagcgtcttggacaactggccaagtggaaaacagctgaagaggttgctgcattagttcggtcgcttcctgtagaagagcagccaaagcaaatcattgtgacaaggaagggtatgttggatcctttggaggtccatctgcttgacttccctaacattgtgatcaagggcagtgagctgcagctgccattccaagcttgtttgaagattgagaagttcggtgatcttattctcaaggccacagaaccccagatggttctttacaacatatatgatgattggttgaaaagtatctcatcattcactgctttctctcggattgtgcttatattgcgtgcacttcatgtcaataatgagaaggcaaagatgctgctcaagcctgacaaaactattgttacggaaccacatcatatttggccaaccttgactgatgagcaatggctgaaggttgaatgtgcactcagggacctcatcctgtctgattatgcaaagaaaaacaatgttaatacgtctgcgctgacacaatctgaaattcgtgacattatacttggtgctgaaatagctccaccatcacagcagaggcaacagattgctgaaattgagaaacagtctagagagacgactcagctgaccgcagttactacaaggacgaccaatgtgcatggagatgagctcatcatcacaacgaccagtccatacgagcaacaagcatttgcatcaaagactgattggcgtgttagggctatctctgccacaaacttgtatcttcgtgtcaatcacatttatgttaactcagatgatataaaggagactggctacacttacattatgccaaagaatatattaaagaagttcatatgcatagcagatttaaggacacagattgcagggtttctgtatgggctgagcccacaggataatccccaagttaaagagatcagatgcatagctattcctccgcagcacggaactcatcagatggtgacactgcctgcaaaccttcccgagcacgagttccttaatgatttggagccactgggatggatgcatacccaaccaaatgaagctcctcagctatcaccacaggatttgacatcacatgccaagatcttggagaacaacaagcaatgggacggtgagaagtgcatcattttgacatgcagctttaccccaggatcttgttcattgaccgcgtacaagctgacgccaagcggttacgagtggggccgtagcaacaaggacaccggaagcaacccacatggatatctcccgactcactacgagaaggtccagatgcttctcagcgacagattcctgggattctacatggtgccggataacaccccttggaacttcaacttcatgggagtcaagcacgacccgctgatgaagtacaacatgaagcttggcacgccccgggacttctatcacgaggaccatcggccgacgcatttcctcgagttcagcaacatcgacgagggcgaggtcgcagaaggtgatagggaggacaccttcacgtaa
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| Protein seq | MWSGGPPPPPPMGAAPPPPGTGAPPPPPPAAVGPPGGVGGGKPLTAAELEAQLVEKARKWHQLNSKRYGDKRKFGFVEAQKEDMPPEHVRKIIRDHGDMSSKKYRHDKRVYLGALKFVPHAVYKLLENMPMPWEQVRHVKILYHITGAITFVNEIPWVVEPIYLAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNLLDVEPLEAIQLELDEEEDSAVHEWFYDHKPLVKTKLINGPSYRKWHLSLPIMATLYRLAGQLLSDLIDRNYFYLFDMESFFTAKALNMCIPGGPKFEPLYRDMEKGDEDWNEFNDINKLIIRQPLRTEYRIAFPHLYNNRPRKVRLGVYHTPMIMYIKTEDPDLPAFYYDPLINPITSTNKVDRRERRTTEEDEDEDFRLPDGVEPLLKGTELYTDTTAAGISLLFAPKPFNMRSGRTRRAEDIPLVSEWYKEHCPPAYPVKVRVSYQKLLKCYVLNELHHRPPKAQKKKHLFRSLQATKFFQTTELDWAEAGLQVCKQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLVVDANIQFRLGNVDAFQLADGLQYIFSHVGQLTGMYRYKYRLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPMWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDVLDAMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPVPIENMILRYVKSKADWWTNVAHYNRERIRRGATVDKTVCRKNLGRLTRLWLKAEQERQHNYLKDGPYVTPEEAVAIYTTTVHWLESRKFSPIPFPPLSYKHDTKLLILALERLKESYSVAVRLNQLQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSYLIPVYEIEPLEKITDAYLDQYLWYEGDKRHLFPNWVKPADSEPPPLLVYKWCQGINNLQDVWDTSDGQCVVMLQTKFEKFFEKIDLTLLNRLLRLVLDHNIADYVTAKNNVVLSYKDMSHTNSYGLIRGLQFASFVVQYYGLVLDLLLLGLTRASEIAGPPTMPNEFLTYADTKVETRHPIRLYSRYIDKVHIMFRFTHEEARDLIQRYLTEHPDPNNENMVGYNNKKCWPRDARMRLMKHDVNLGRSVFWDMKNRLPRSITTLEWENSFVSVYSKDNPNLLFSMCGFEVRILPKIRMTQEAFSNTKDGVWNLQNEQTKERTAIAFLRVDDEHMKVFENRVRQILMSSGSTTFTKIVNKWNTALIGLMTYFREATVHTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVIFYTPKEIGGLGMLSMGHILIPQSDLRYSKQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAQSQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVLDQELDALEIETVQKETIHPRKSYKMNSSCADILLFAAHRWQMSKPSLVSESKDVFDQKASNKYWIDVQLRWGDYDSHDIERYTRAKFMDYTTDNMSIYPSPTGVMIGIDLAYNLHSAFGNWFPGSKPLLQQAMNKIMKSNPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGEIFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKVIHTSVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKIEKFGDLILKATEPQMVLYNIYDDWLKSISSFTAFSRIVLILRALHVNNEKAKMLLKPDKTIVTEPHHIWPTLTDEQWLKVECALRDLILSDYAKKNNVNTSALTQSEIRDIILGAEIAPPSQQRQQIAEIEKQSRETTQLTAVTTRTTNVHGDELIITTTSPYEQQAFASKTDWRVRAISATNLYLRVNHIYVNSDDIKETGYTYIMPKNILKKFICIADLRTQIAGFLYGLSPQDNPQVKEIRCIAIPPQHGTHQMVTLPANLPEHEFLNDLEPLGWMHTQPNEAPQLSPQDLTSHAKILENNKQWDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGRSNKDTGSNPHGYLPTHYEKVQMLLSDRFLGFYMVPDNTPWNFNFMGVKHDPLMKYNMKLGTPRDFYHEDHRPTHFLEFSNIDEGEVAEGDREDTFT
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.890238 | 0.983083 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0167000 | RBH | 21.522669 | 23.485594 | 27.832586 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g07080 | RBH | 11.437551 | 12.055960 | 5.610020 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0167000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0004920 | RBH | 6.817055 | 34.680119 | 31.116316 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0004830 | RBH | 1.839906 | 10.551326 | 14.826324 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0004770 | RBH | 10.065877 | 29.024426 | 49.822430 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0004960 | RBH | 1.580025 | 1.336522 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0004850 | RBH | 49.915039 | 62.883728 | 88.958176 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0058500 | RBH | 33.5354455 | 126.086807 | 74.6632365 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0004710 | RBH | 2.784736 | 2.435485 | 5.911405 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0058200 | RBH | 33.0525275 | 165.507576 | 95.892502 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0004500 | RBH | 2.381650 | 0.829845 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0004810 | RBH | 7.012980 | 80.499252 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0004820 | RBH | 47.086739 | 165.298309 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0004850 | RBH | 0.290389 | 3.094948 | 2.496418 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0004720 | RBH | 5.213725 | 45.022999 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G004600 | RBH | 3.760406 | 21.157576 | 12.463126 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0004880 | RBH | 19.795031 | 109.261765 | 60.011944 |
