Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_04g0023110 | OGI:04085040 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr04:30153121-30156953 | ||||||||
| Gene Symbol | CYP87A3, OsCYP87A3 | ||||||||||
| DNA seq | ttagggaagagctggatatgaaaaccatctggaaagctgagaccgggggttcggactatgtttcctcctttcactgtcctccaactaccatgagaaaaaaatggttattcagatgatgtccacaggatgagccaacgtgagaatgttatatttaggttgagaaatggtacctgtattttgtaactaaagcgtgtatgaatgttgccatcaaaaccttgctgagatcagttccaacgcagaaccgaagcccaccaccgaaggccatgaaatgcttcgttcctccagtgatctctggttttccctgttcagacaagggctagtttagagccatatattatttcaatgcagatattccttactaatgtggaaaatgcatgtgatgctcccattctctccctttcctcgttatgctacccattactcattttccacaacttcaatgcaatcagttgctttttttatagggtaatggaaacacttgtttattgaaactcttggttctcactttgtttatttctttatacccaatcacctaggagagctcactgaacctgaaatcagcttgttactgcatctatagatccatgtcatagacaggcaagacagcttgcctttttacagattgcattgctctttatgcaatttatcatcctttttgttttacaagggactggtgaaatagcacatggttcacctaccggattgagatactgtcggattacaaatttattaccacaagccccaatgatagctaacaattttctgtgcacttaagtagtacttgacagatgagatagcttcatggtacttgttttttcataggttacactatgtacttctcttggcatttgaccttgttgttaaactactgagcaggaagtttctctgttggttctggtattaaacccctgaccgatcaagctggtacttgagatcagaaccttgcaaccttatactaatcacagtgctaattattgggaagttgcagttaattaaagtattcttctttcataatttccgttttaatgtcgaggcttgagaggagaatatatgcaagttcggtgagcagatcagatcattacagttcctacttcctagatgaggagagagctctttttttttaataaaaaagggacgcctaaaataaactgaaggaccaaagctcaaggctggagctgccgctcaacctggcaaaatggaaccctaacctacgtgtaaacttagaatgtacatgcagaaactgctaattactgaaagttcatattaagaagactaacctgccacctccatggattgaaggccaacggatcttcatatatctcggggtttaagtgcactgccggtgggcacaccatgataccccatcctgctggaattgtgtagcctgcacaaagttcagagttcagttttgtgctgcaacttgctgaagtgaacctttctaattaacaagagatgtcaggtgctagatagtattcgagatgtgtgtacctttgatctcaacatcctgcaacgccttccgaaaaattcccggcacgatgtttgcgagtcttacaatctccattatgaccttcacataaagaacatggaagcgttagttttggcagttatggattcagaaatcgtacggaaatggcatctactacataacctgcagttgccaaaacaattaactgcggtaaaaattcaggttgccgagttctgattctcttcctcttttgctattttcaattgtAaaaataggagtttttcttaatcagccaagcctgttcaagaaagttcttacagttattattaactaagattatctatcattcttgaagattgggccttggttaaacaacaggggaacacgaactctgcacttgcagagttgcagtcttgttggcaacagctttgggctcccaagattcttgcactagttccagatcaatctcattgttccccaagtaaattcgagcGggggggtattacagtacgtagcagtgcagattggtctagcgcacactagtcccgggttaggctcacctgagacgtgaacgtcatcgatttgtactcggcccacgtgacgccggaattggggtccttcctgttcctgatgattgcctcgtgctcctcctgcatgcccacgcgatcgacaaggtttaattctactttgctttaacttgtcgatcgattgatctgatcaatgacgagctagctgaactcatcacactcccgttgagtgaaatatgatcaacagcgagagtagagagtagactaacccttagtgcgtcgacgactttgggattctcggtgaggagcttgacgccgatggtgagcgccagcgcggtggtctcgaagctggcgaagaggaggacgaacatgaggtccagcgcgatggtctccgtcagcagcggcttctccctcctcagctcctggatcacgtggtcgaagaagtcctcgcatggccgctccggttcggccatcctctccttcatcatgcccctcagcaccttcatcgcgttcttcctcccctgtgtacgtatcaattcaaaaaaacaaatttaaaatcggaattcattttttttgagtatatatcagctagctgtgtaacagtaagaagcaggagtttctgaggtttatggagtgcatgtgcgcggctatacggccaagtacaccgatctgtctgtgcgtgtggtccttagtttagtggcgtttcgcatgtgcagacggcctagctagggtgcaatttgaagttgtacgaattatatcgtgttcaagagtatgggggcagttgccgagttgcgggcggctgcgggcgtgtgggcgccgtacctccatgcactcgtgataggccgtgccagggatgttcagtgggaaggatatcaacccgcgaatgaacgcgccgaagttcttcctcaggttcacctgcgacggcttggacgggtcgtagccgatcagcttcttggctgtgagatcaaatatcatctgaaatatatatacagaattaatcctcgtcaattacgcgcaatgcggctagctaggcagctagcacatgctgatgcatgctggttgatttggcgtccggtgtgtgcttacagtggagatgccttccttgagctcgacgctgggctgggaggcccaggaggcgaggctgccgcggcaggcggcgtccgtctcggcgaggagcacggacttgaggttctcctggccgtagagccggagcacgagcgtcttgaggtacttgtacatgaagccgtgcagggagccgacgttgtcgcggccgaagatctcggtgaaggtgtccgggtaccagctctcgaacagcttcccctcctgctggaacacgtagtagttcatctccgggtcggccgacaccaccaccggccgccccaccacgcttgtcttgaagatgctcccgtacctgcgcccaacgccaacgccaatgtcacggaccgaactcgatcgatcaacaacgtcaatacttccgcacgccattgccgcatgcgttcttggttctgaggtggaggtgtgtacctcttgatcctctccttgacgaaGggggagagatcgcaggtcgggttgggcgcgaagaactgcagcgtctcgccgatgacggggaggccgagcgagcccggcggcagcctgccgttcgacctggggtggctccacctgtacgcccagcggaggagcgcgacgacggctgccaatgccgcgcacaggagcgctatataggccatggaagaagccatggccgccccggaggcggcgagaaggttcgcgtcgtataatcttggggcgagagggatggtggtggcgaggcggagagaagctagttgaagatatggctgcat
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| CDS seq | atgcagccatatcttcaactagcttctctccgcctcgccaccaccatccctctcgccccaagattatacgacgcgaaccttctcgccgcctccggggcggccatggcttcttccatggcctatatagcgctcctgtgcgcggcattggcagccgtcgtcgcgctcctccgctgggcgtacaggtggagccaccccaggtcgaacggcaggctgccgccgggctcgctcggcctccccgtcatcggcgagacgctgcagttcttcgcgcccaacccgacctgcgatctctccccCttcgtcaaggagaggatcaagaggtacgggagcatcttcaagacaagcgtggtggggcggccggtggtggtgtcggccgacccggagatgaactactacgtgttccagcaggaggggaagctgttcgagagctggtacccggacaccttcaccgagatcttcggccgcgacaacgtcggctccctgcacggcttcatgtacaagtacctcaagacgctcgtgctccggctctacggccaggagaacctcaagtccgtgctcctcgccgagacggacgccgcctgccgcggcagcctcgcctcctgggcctcccagcccagcgtcgagctcaaggaaggcatctccactatgatatttgatctcacagccaagaagctgatcggctacgacccgtccaagccgtcgcaggtgaacctgaggaagaacttcggcgcgttcattcgcgggttgatatccttcccactgaacatccctggcacggcctatcacgagtgcatggaggggaggaagaacgcgatgaaggtgctgaggggcatgatgaaggagaggatggccgaaccggagcggccatgcgaggacttcttcgaccacgtgatccaggagctgaggagggagaagccgctgctgacggagaccatcgcgctggacctcatgttcgtcctcctcttcgccagcttcgagaccaccgcgctggcgctcaccatcggcgtcaagctcctcaccgagaatcccaaagtcgtcgacgcactaagggaggagcacgaggcaatcatcaggaacaggaaggaccccaattccggcgtcacgtgggccgagtacaaatcgatgacgttcacgtctcaggtcataatggagattgtaagactcgcaaacatcgtgccgggaatttttcggaaggcgttgcaggatgttgagatcaaaggctacacaattccagcaggatggggtatcatggtgtgcccaccggcagtgcacttaaaccccgagatatatgaagatccgttggccttcaatccatggaggtggcagggaaaaccagagatcactggaggaacgaagcatttcatggccttcggtggtgggcttcggttctgcgttggaactgatctcagcaagttggaggacagtgaaaggaggaaacatagtccgaacccccggtctcagctttccagatggttttcatatccagctcttccctaa
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| Protein seq | MQPYLQLASLRLATTIPLAPRLYDANLLAASGAAMASSMAYIALLCAALAAVVALLRWAYRWSHPRSNGRLPPGSLGLPVIGETLQFFAPNPTCDLSPFVKERIKRYGSIFKTSVVGRPVVVSADPEMNYYVFQQEGKLFESWYPDTFTEIFGRDNVGSLHGFMYKYLKTLVLRLYGQENLKSVLLAETDAACRGSLASWASQPSVELKEGISTMIFDLTAKKLIGYDPSKPSQVNLRKNFGAFIRGLISFPLNIPGTAYHECMEGRKNAMKVLRGMMKERMAEPERPCEDFFDHVIQELRREKPLLTETIALDLMFVLLFASFETTALALTIGVKLLTENPKVVDALREEHEAIIRNRKDPNSGVTWAEYKSMTFTSQVIMEIVRLANIVPGIFRKALQDVEIKGYTIPAGWGIMVCPPAVHLNPEIYEDPLAFNPWRWQGKPEITGGTKHFMAFGGGLRFCVGTDLSKLEDSERRKHSPNPRSQLSRWFSYPALP |
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| Function | Cytochrome P450 87A3 [UniProtKB/Swiss-Prot:Q7XU38] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_04g0023110 | OsLima_04g0023110.01 | Chr04 | 30153121 | 30156953 | - | NAM | ||
| CDS seq | atgcagccatatcttcaactagcttctctccgcctcgccaccaccatccctctcgccccaagattatacgacgcgaaccttctcgccgcctccggggcggccatggcttcttccatggcctatatagcgctcctgtgcgcggcattggcagccgtcgtcgcgctcctccgctgggcgtacaggtggagccaccccaggtcgaacggcaggctgccgccgggctcgctcggcctccccgtcatcggcgagacgctgcagttcttcgcgcccaacccgacctgcgatctctccccCttcgtcaaggagaggatcaagaggtacgggagcatcttcaagacaagcgtggtggggcggccggtggtggtgtcggccgacccggagatgaactactacgtgttccagcaggaggggaagctgttcgagagctggtacccggacaccttcaccgagatcttcggccgcgacaacgtcggctccctgcacggcttcatgtacaagtacctcaagacgctcgtgctccggctctacggccaggagaacctcaagtccgtgctcctcgccgagacggacgccgcctgccgcggcagcctcgcctcctgggcctcccagcccagcgtcgagctcaaggaaggcatctccactatgatatttgatctcacagccaagaagctgatcggctacgacccgtccaagccgtcgcaggtgaacctgaggaagaacttcggcgcgttcattcgcgggttgatatccttcccactgaacatccctggcacggcctatcacgagtgcatggaggggaggaagaacgcgatgaaggtgctgaggggcatgatgaaggagaggatggccgaaccggagcggccatgcgaggacttcttcgaccacgtgatccaggagctgaggagggagaagccgctgctgacggagaccatcgcgctggacctcatgttcgtcctcctcttcgccagcttcgagaccaccgcgctggcgctcaccatcggcgtcaagctcctcaccgagaatcccaaagtcgtcgacgcactaagggaggagcacgaggcaatcatcaggaacaggaaggaccccaattccggcgtcacgtgggccgagtacaaatcgatgacgttcacgtctcaggtcataatggagattgtaagactcgcaaacatcgtgccgggaatttttcggaaggcgttgcaggatgttgagatcaaaggctacacaattccagcaggatggggtatcatggtgtgcccaccggcagtgcacttaaaccccgagatatatgaagatccgttggccttcaatccatggaggtggcagggaaaaccagagatcactggaggaacgaagcatttcatggccttcggtggtgggcttcggttctgcgttggaactgatctcagcaagttggaggacagtgaaaggaggaaacatagtccgaacccccggtctcagctttccagatggttttcatatccagctcttccctaa
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| Protein seq | MQPYLQLASLRLATTIPLAPRLYDANLLAASGAAMASSMAYIALLCAALAAVVALLRWAYRWSHPRSNGRLPPGSLGLPVIGETLQFFAPNPTCDLSPFVKERIKRYGSIFKTSVVGRPVVVSADPEMNYYVFQQEGKLFESWYPDTFTEIFGRDNVGSLHGFMYKYLKTLVLRLYGQENLKSVLLAETDAACRGSLASWASQPSVELKEGISTMIFDLTAKKLIGYDPSKPSQVNLRKNFGAFIRGLISFPLNIPGTAYHECMEGRKNAMKVLRGMMKERMAEPERPCEDFFDHVIQELRREKPLLTETIALDLMFVLLFASFETTALALTIGVKLLTENPKVVDALREEHEAIIRNRKDPNSGVTWAEYKSMTFTSQVIMEIVRLANIVPGIFRKALQDVEIKGYTIPAGWGIMVCPPAVHLNPEIYEDPLAFNPWRWQGKPEITGGTKHFMAFGGGLRFCVGTDLSKLEDSERRKHSPNPRSQLSRWFSYPALP
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.242917 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0570000 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g48170 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0570000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0023480 | RBH | 0.0 | 3.437285 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0024220 | RBH | 0.000000 | 0.000000 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0023950 | RBH | 0.0 | 1.492278 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0023700 | RBH | 0.0 | 0.402787 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0023840 | RBH | 0.0 | 13.438776 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0449500 | RBH | 0 | 1.9802025 | 0.004374 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0022610 | RBH | 0.0 | 0.315554 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0453300 | RBH | 0.0183645 | 0.312138 | 0.0681965 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0028570 | RBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0022940 | RBH | 0.0 | 8.999072 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0023060 | RBH | 0.0 | 6.339609 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0023470 | RBH | 0.0 | 1.234657 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0023660 | RBH | 0.0 | 0.918939 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G022900 | RBH | 0.0 | 3.633724 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0022780 | RBH | 0.0 | 0.000000 | 0.0 |
