Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_04g0020990 | OGI:04080570 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr04:28269494-28271735 | ||||||||
| Gene Symbol | NAC2, OsNAC2, ONAC004, ONAC4, ONAC034, ONAC34, ONAC058, ONAC58, OMTN2, Ostil1, OsNAC2/ONAC004, OsORE1.2, DLN113, OsDLN113, OsORE1, NAC82, OsSWN6, ONAC082, ONAC82 | ||||||||||
| DNA seq | actgtatcaaatcacaccgcaatgttattaggctgtatacaatggcgtatatgttagtatgtgttttgcatcattcacgcggctatttccacAaatcctcctcccctccgcaggaggcagacgtggacacgtaatccaagctatcctcctgcttcccctcgacctgaaacacctgcaccggattgcagtaactgggctccttcgcagtcgagtcgccgtggccgaactgagacgccaccagcttgtcaagatccctccaatctgctgccgacgcatcggccgtcacgtagaccggctcgatctgcagctgcagctgctgcgccgtcgtgtggccgcacggctggagagcggacgacgctgcggtggcgacaatgatgtcggcggccggtagcttggggctctccagccttgggaggtgcatgaacggcgccgcctcctgaggaaggaggtggtggtgatactctacctccagcttgcaagggtggctctggcggtggccatggtacggcgagtcgaggcctggcgccggcgccatgaacgcgacgtgctcgttgaaccagaaaggtgagtcgccgccgtcgccggccgccctttgcaccgccgcgactcgcttcttgaacaccctgcagaccacccatccttcctcctgaacatggagcatgttaggtgtctgaagtctgaatcctcggtagcatgcatgcactagtacacaaacttacttggggagctccgtattcgttggtctccaagcgatactcgtgcatgatccagtccgacttctgtccgttgggagcccggcccctgtagaaaaccaacgtcttcctcatcccaacaaggcagttcttgacatagatcggcttgtccctcccggtggccttccaaaagccggcagtggtcgccctgttggtgcgtgtgcccgtcGggtacttcttgtccttgtggctgaagaagtaccactcgttctgctcctcgtttccaatcttgcattgttctgtttgagcatcattttggagatgtcgattaattagctagttatgatattacagggttagagataagcagcaagcttgtagaataagtggagtaaattgtgattaccttgtaggtcccaaggctcaattttgtacagatcaatatcttttatgacgtccaagtctatcttcttcagtgctaccttcttcctaaggtagtaatccacgagttcctcgtcagtagggtggaaacgaaaacctggcgggacatgggagaatgcgtccatcttcttccgcggatcaaagtatagctcccgaactggtagcaagttaatatgaactgcatgcacgataagaagctatatttcagttacaggctagtttgataacgatgcatatatgcatgtgtaacgaattccaaggaagaatttgaacatatagcatccaacttctcgttagctcatgtctactagtactagctagaatcaggaaatctcacaggaaatactccttttcttaattgagaaagcattcgatcggtttgcacctggtctctctaacgattctgaggagtttctttctttttgtaggaagatgaatcggaaattcatccagtgaagtttctctgaccagaggctggtctctctaacgattctgaggagtttctttctttttgtaggaagatgaatcggaaattcatccagtgaagtttctctgaccagaggctgattctcgctcttctgcactcctatagaagactagcttgatcaacaggagGTgtatccttgcttccacttccatttatgcatccatgatgaaacctttgccggtttgtgtgaaaaagaagacgagatagaggaggacaggagcatcgagttcaagttgttcagctaaacaaaccgagcgcaaactagggagagctaaagttgctcgccgtcctatccgacaaagcacactgcacacacctaggccctagggactcgcgaaccttgtacccacgaagacggaagaaaagacatcgctaatcacgcagcacgtaccccagttcagcacgcgcgcacagtgcgcggtaaacaaacaaaaggtaaaacaagctagcatcatcgatcaagcagaaaaccacgggttggaaatggacgagccgtctcttaccttgtgcgcgcgcgcctgcaattgctactgcttcgtagcttgcagcagcatgcagcgcctccctcggccagcagcagccagccttcaaacggatggagcagctatatcgatcgcatgag
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| CDS seq | atggacgcattctcccatgtcccgccaggttttcgtttccaccctactgacgaggaactcgtggattactaccttaggaagaaggtagcactgaagaagatagacttggacgtcataaaagatattgatctgtacaaaattgagccttgggacctacaagaacaatgcaagattggaaacgaggagcagaacgagtggtacttcttcagccacaaggacaagaagtaccCgacgggcacacgcaccaacagggcgaccactgccggcttttggaaggccaccgggagggacaagccgatctatgtcaagaactgccttgttgggatgaggaagacgttggttttctacaggggccgggctcccaacggacagaagtcggactggatcatgcacgagtatcgcttggagaccaacgaatacggagctccccaagaggaaggatgggtggtctgcagggtgttcaagaagcgagtcgcggcggtgcaaagggcggccggcgacggcggcgactcacctttctggttcaacgagcacgtcgcgttcatggcgccggcgccaggcctcgactcgccgtaccatggccaccgccagagccacccttgcaagctggaggtagagtatcaccaccacctccttcctcaggaggcggcgccgttcatgcacctcccaaggctggagagccccaagctaccggccgccgacatcattgtcgccaccgcagcgtcgtccgctctccagccgtgcggccacacgacggcgcagcagctgcagctgcagatcgagccggtctacgtgacggccgatgcgtcggcagcagattggagggatcttgacaagctggtggcgtctcagttcggccacggcgactcgactgcgaaggagcccagttactgcaatccggtgcaggtgtttcaggtcgaggggaagcaggaggatagcttggattacgtgtccacgtctgcctcctgcggaggggaggaggattTgtggaaatag
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| Protein seq | MDAFSHVPPGFRFHPTDEELVDYYLRKKVALKKIDLDVIKDIDLYKIEPWDLQEQCKIGNEEQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKPIYVKNCLVGMRKTLVFYRGRAPNGQKSDWIMHEYRLETNEYGAPQEEGWVVCRVFKKRVAAVQRAAGDGGDSPFWFNEHVAFMAPAPGLDSPYHGHRQSHPCKLEVEYHHHLLPQEAAPFMHLPRLESPKLPAADIIVATAASSALQPCGHTTAQQLQLQIEPVYVTADASAADWRDLDKLVASQFGHGDSTAKEPSYCNPVQVFQVEGKQEDSLDYVSTSASCGGEEDLWK |
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| Function | NAC domain-containing protein 7 [UniProtKB/Swiss-Prot:Q9FWX2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_04g0020990 | OsLima_04g0020990.01 | Chr04 | 28269494 | 28271735 | - | NAM | ||
| CDS seq | atggacgcattctcccatgtcccgccaggttttcgtttccaccctactgacgaggaactcgtggattactaccttaggaagaaggtagcactgaagaagatagacttggacgtcataaaagatattgatctgtacaaaattgagccttgggacctacaagaacaatgcaagattggaaacgaggagcagaacgagtggtacttcttcagccacaaggacaagaagtaccCgacgggcacacgcaccaacagggcgaccactgccggcttttggaaggccaccgggagggacaagccgatctatgtcaagaactgccttgttgggatgaggaagacgttggttttctacaggggccgggctcccaacggacagaagtcggactggatcatgcacgagtatcgcttggagaccaacgaatacggagctccccaagaggaaggatgggtggtctgcagggtgttcaagaagcgagtcgcggcggtgcaaagggcggccggcgacggcggcgactcacctttctggttcaacgagcacgtcgcgttcatggcgccggcgccaggcctcgactcgccgtaccatggccaccgccagagccacccttgcaagctggaggtagagtatcaccaccacctccttcctcaggaggcggcgccgttcatgcacctcccaaggctggagagccccaagctaccggccgccgacatcattgtcgccaccgcagcgtcgtccgctctccagccgtgcggccacacgacggcgcagcagctgcagctgcagatcgagccggtctacgtgacggccgatgcgtcggcagcagattggagggatcttgacaagctggtggcgtctcagttcggccacggcgactcgactgcgaaggagcccagttactgcaatccggtgcaggtgtttcaggtcgaggggaagcaggaggatagcttggattacgtgtccacgtctgcctcctgcggaggggaggaggattTgtggaaatag
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| Protein seq | MDAFSHVPPGFRFHPTDEELVDYYLRKKVALKKIDLDVIKDIDLYKIEPWDLQEQCKIGNEEQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKPIYVKNCLVGMRKTLVFYRGRAPNGQKSDWIMHEYRLETNEYGAPQEEGWVVCRVFKKRVAAVQRAAGDGGDSPFWFNEHVAFMAPAPGLDSPYHGHRQSHPCKLEVEYHHHLLPQEAAPFMHLPRLESPKLPAADIIVATAASSALQPCGHTTAQQLQLQIEPVYVTADASAADWRDLDKLVASQFGHGDSTAKEPSYCNPVQVFQVEGKQEDSLDYVSTSASCGGEEDLWK
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0536500 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g45340 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0536500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0021280 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0022030 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0021750 | RBH | 0.0 | 5.344802 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0021500 | RBH | 0.0 | 0.047189 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0021680 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0422100 | RBH | 0.3944945 | 15.601109 | 0.50051 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0020490 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0422400 | RBH | 0.38895 | 6.6455535 | 0.862155 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0026650 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0020830 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0020900 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0021320 | RBH | 0.0 | 0.190982 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0021500 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G020760 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0020680 | RBH | 0.0 | 0.0 | 0.0 |
