Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_04g0007350 | OGI:04047000 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr04:14666286-14670696 | ||||||||
| Gene Symbol | WAK36, OsWAK36, OsRLCK140, RLCK140 | ||||||||||
| DNA seq | taggaaagttcctattatatgcagaagatagatatatatactgacgagctagagcttcggagttaatttcaaggccacaggcgtaagctaactgggtgttataggctggacgacgatggctgccgtcgtcGTTgatgtgctactggcatgtctagcgctgctcctaccagcttcgtcatgtgcagctggggcaccaacggtggcagctgcacagaccagcgctggcgccggaggtggctatggcgctggctgtgccaagagctgcggtgacctgaccttcgattaccctttcggcatcggcgccggctgcgcccggggccatgacttccagctcgtttgcaacaccaccacgcagcccccaacgctcttcctcagcgatggctttacccaagtcatcaacagcatcggggccgccggctatggtacgtatgtacgtacgtactatgtttctattgtgtgcgactgtgcgtagctctatatgggggttgtggggttggggggtaagtgtggtcgtctatgtgtgtcaaaagaagtttatgatagttcgtGgggtggttcaagagaaagcacatcgttttccgcgcgtatgcttcccaaactaataaacggtgtgtttttttcaaaaaaaaatttctataggaaagttacttttaaaaattatgttaatctatttttgaaatttaaaatagttagtactcaattaattatgtagtaatggtttcatgtagatagatgtgtgacacacacaggcaatattttacacaagtttttttttttaccttagtcttccctaactaaattgcgtgtaggcaatctccaaaccccttcacaatcccctcctagggttgtcttatcttgatccctacaaccgtctccgagagaccactggcatagagctcttctataagcttggtggcaaccactaggagcaacaagctggtcacacttgcttaagaatgttcaagtgacacagtagctggctcgttaagataatcagcacaaacgagccgagatggctcgttatccatcccaatatgcctttggcgtatgtaagccacagccataaaataactttcaatcagaactaaattggttttcttatcatcattatgtcttagtcatctaacttgTttttttttataataagcagtctatgtgaacttttcacttgacatccctatgagatctggtgtcgatctgtacaatgtgtcatggacggtacctggcgattctttctccgtacgtgacagtgcaagggtaaccatcggacatggcaactttgatgtatacttgctcgatgcctacagttcgaagaggataatcttgtgttcgcttacccagcctaccattattgatgacaccagtgacgagggtgagtgccaacggaatattcccatcgtccgtggttttcaactccagtttgtccatcggcatgaacacggcgaaggccagcgaaccagtgtcgacagcgtcagaatcgagaacgacggcgtgcgacttgggtgggccattgtggatcattcgacgtgcgctgaagccaagcgtgacaagagcagctatgcctgtgccagcaagcacagccggtgcgatgataacctgagctttacagcttcccgtgctggttacttatgcaagtgcaccgatgggtatcaagggaacccgtatgcacccaatggctgccggcgtgatgtaggtatatgcatgcttataattttttacacctctatctatatctatatctctcaaaaatcttctaaggaaaataatgtttctattgatttatgaaATatatatatattctgtatatgtctgtagagtaattttatagtccttgagagataaaaaaaaagtactaattttttatagtataaatttgttgtcttctagtacaaaaggcatcaagagttattaaattttacgttgggaaatacggtaactctcgcggtaacttttcgagaacagtAaaatcactcatatctataataccaacattttgtaaaagtattttgaaattgaaatatgttggtataaACatgaatttatacactaaatgtttttgtaatttgactgcctgttggtcaagatttataaaatctgacctttcgaaatcaaagtacgtaggtcttacgaaaatatacggtgggaatgataaattaacatatatatgttaatgttcaaagcatcaaTAGtatatgtacagtacgtaattagcatcaatttttaattattgctgttgacatatcatggttttctcaatgcaggattgccggacgcaagatatgatcggtttccgagtaagaacaattgtagcccgtcatgtggaaatatcagcgttccatatccatttggcctagaaaaaggctgctctgcaaatcagcatttcctgctcagatgcacctactacaaagacaacaagagtacaaaccctgacctcttgtggtgggcaacaagatacaccgacgagccgtcaacaccgaccaagcttgttcgcatagatatcagcgaaggactcattatcttggccggtgagcactacgaggagttccttgccatggatggtacggctagtgctagagtctccgatggttcagcaaaggactttgtggttaagaatctgcattttgccatcacaaaccaaacctgcaaagaggcgcagcagaataccaccggatatgcatgtgtcagcgttaacagtacgtgtttggccgtcaacacaggtgatgggtatattggttataggtgcaagtgcaagcatggctttgaagggaatccgtatatcaaagatggttgccaaggtttgtctctgtcccttttcacaagcacagttagcattgcttcacaatttaacgcacttggACacagccaacatatatattggtatattgttatactctccccttattacaaatattttttttctcttgtcttagactgctaattaaaatccctcacgtcttaattactgtaacatgtgcatggttgcagatgttgacgaatgctccactgcaccaggcatctgtccagaaatatgcaataatactgtcggtaactacatttgcatcaagtgccctgctaaatcagagtacaatgacaaaaccaagcggtgcactccagtgaaaaagcaaaaaaatcttctttttggtgagttatgtagtccattcaatttcaccatgcagaaaaagaaaattaaaaaaaagtaaataatgtacttgcaagcatgcataaccatcgtctgcctcattgtttaggtatcgtcatcggacttagtgctggctttggaattctactgcctggcttaagcgcaaaaatgctcttccataaatggaataaaggtatccaaaagcggctacgtaggaagaattttcgtaagaacgaaggacttctcctagaacaactaatatcgtgtgatgaaaccactactgatagaatgaatatcttcactttagaagagctagaaaaggctacaaacaactttgatcacacaagaatacttggccaaggaggacacggtacggtttacaaaggcatcttatcggaccaacgtgtcgtggccattaaaaagtctatgacgatcaaacaaggtgagatcactcagttcataaatgaagtcgctattctttcacggatcaaccatcggaatatcgttaaactttttgggtgttgtcttgaaactgaggtcccactattggtgtatgattttatttccaacggatcattatttgaactcttgcgttacaattcgagtaatgatagcttgctgtcttgggaagacaccttaaggattgctacagaagttgctggagccctatattatctccactctgcagcttcagtatcagtttttcatcgtgatgtgaagtcctctaatatactgttagatgcaaattacactaccaaagtttcagattttggtacgtcaagattggtttctattgatcaaacccatattgtcacaaaggtgcaaggcacatttggttatttagatccagagtattgtcaaactgggtgtctaaacgaaaaaagcgatgtgtatagttttggtgtggtactattggagctacttctcatgaaagagccgatttttacaagtgagaatggcttaaagttgaatttggccggttattttcttgaggaggtgaaggtaaggccattaagtgagattgttaccactaagatatacgaagaagcaacagaggaagagattaacaatgttaccttgcttgcggagatgtgcttgagtccccgaggcgaagaaagacctaccatgaagcaagtagagatgacattacagtccttgcgcaatgttacacagacaacggctgttcaccgtgctaatgcatcggatcagctgagccaaagatgctatagcctagagcatgagttcattgcttcagctgagctaccacgctaa
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| CDS seq | atggctgccgtcgtcGTTgatgtgctactggcatgtctagcgctgctcctaccagcttcgtcatgtgcagctggggcaccaacggtggcagctgcacagaccagcgctggcgccggaggtggctatggcgctggctgtgccaagagctgcggtgacctgaccttcgattaccctttcggcatcggcgccggctgcgcccggggccatgacttccagctcgtttgcaacaccaccacgcagcccccaacgctcttcctcagcgatggctttacccaagtcatcaacagcatcggggccgccggctatgtctatgtgaacttttcacttgacatccctatgagatctggtgtcgatctgtacaatgtgtcatggacggtacctggcgattctttctccgtacgtgacagtgcaagggtaaccatcggacatggcaactttgatgtatacttgctcgatgcctacagttcgaagaggataatcttgtgttcgcttacccagcctaccattattgatgacaccagtgacgagggtgagtgccaacggaatattcccatcgtccgtggttttcaactccagtttgtccatcggcatgaacacggcgaaggccagcgaaccagtgtcgacagcgtcagaatcgagaacgacggcgtgcgacttgggtgggccattgtggatcattcgacgtgcgctgaagccaagcgtgacaagagcagctatgcctgtgccagcaagcacagccggtgcgatgataacctgagctttacagcttcccgtgctggttacttatgcaagtgcaccgatgggtatcaagggaacccgtatgcacccaatggctgccggcgtgatgtaggattgccggacgcaagatatgatcggtttccgagtaagaacaattgtagcccgtcatgtggaaatatcagcgttccatatccatttggcctagaaaaaggctgctctgcaaatcagcatttcctgctcagatgcacctactacaaagacaacaagagtacaaaccctgacctcttgtggtgggcaacaagatacaccgacgagccgtcaacaccgaccaagcttgttcgcatagatatcagcgaaggactcattatcttggccggtgagcactacgaggagttccttgccatggatggtacggctagtgctagagtctccgatggttcagcaaaggactttgtggttaagaatctgcattttgccatcacaaaccaaacctgcaaagaggcgcagcagaataccaccggatatgcatgtgtcagcgttaacagtacgtgtttggccgtcaacacaggtgatgggtatattggttataggtgcaagtgcaagcatggctttgaagggaatccgtatatcaaagatggttgccaagatgttgacgaatgctccactgcaccaggcatctgtccagaaatatgcaataatactgtcggtaactacatttgcatcaagtgccctgctaaatcagagtacaatgacaaaaccaagcggtgcactccagtgaaaaagcaaaaaaatcttctttttggtatcgtcatcggacttagtgctggctttggaattctactgcctggcttaagcgcaaaaatgctcttccataaatggaataaaggtatccaaaagcggctacgtaggaagaattttcgtaagaacgaaggacttctcctagaacaactaatatcgtgtgatgaaaccactactgatagaatgaatatcttcactttagaagagctagaaaaggctacaaacaactttgatcacacaagaatacttggccaaggaggacacggtacggtaaggccattaagtgagattgttaccactaagatatacgaagaagcaacagaggaagagattaacaatgttaccttgcttgcggagatgtgcttgagtccccgaggcgaagaaagacctaccatgaagcaagtagagatgacattacagtccttgcgcaatgttacacagacaacggctgttcaccgtgctaatgcatcggatcagctgagccaaagatgctatagcctagagcatgagttcattgcttcagctgagctaccacgctaa
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| Protein seq | MAAVVVDVLLACLALLLPASSCAAGAPTVAAAQTSAGAGGGYGAGCAKSCGDLTFDYPFGIGAGCARGHDFQLVCNTTTQPPTLFLSDGFTQVINSIGAAGYVYVNFSLDIPMRSGVDLYNVSWTVPGDSFSVRDSARVTIGHGNFDVYLLDAYSSKRIILCSLTQPTIIDDTSDEGECQRNIPIVRGFQLQFVHRHEHGEGQRTSVDSVRIENDGVRLGWAIVDHSTCAEAKRDKSSYACASKHSRCDDNLSFTASRAGYLCKCTDGYQGNPYAPNGCRRDVGLPDARYDRFPSKNNCSPSCGNISVPYPFGLEKGCSANQHFLLRCTYYKDNKSTNPDLLWWATRYTDEPSTPTKLVRIDISEGLIILAGEHYEEFLAMDGTASARVSDGSAKDFVVKNLHFAITNQTCKEAQQNTTGYACVSVNSTCLAVNTGDGYIGYRCKCKHGFEGNPYIKDGCQDVDECSTAPGICPEICNNTVGNYICIKCPAKSEYNDKTKRCTPVKKQKNLLFGIVIGLSAGFGILLPGLSAKMLFHKWNKGIQKRLRRKNFRKNEGLLLEQLISCDETTTDRMNIFTLEELEKATNNFDHTRILGQGGHGTVRPLSEIVTTKIYEEATEEEINNVTLLAEMCLSPRGEERPTMKQVEMTLQSLRNVTQTTAVHRANASDQLSQRCYSLEHEFIASAELPR |
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| Function | Wall-associated receptor kinase 5 [UniProtKB/Swiss-Prot:Q9LMN7] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_04g0007350 | OsLima_04g0007350.01 | Chr04 | 14666286 | 14670696 | + | NAM | ||
| CDS seq | atggctgccgtcgtcGTTgatgtgctactggcatgtctagcgctgctcctaccagcttcgtcatgtgcagctggggcaccaacggtggcagctgcacagaccagcgctggcgccggaggtggctatggcgctggctgtgccaagagctgcggtgacctgaccttcgattaccctttcggcatcggcgccggctgcgcccggggccatgacttccagctcgtttgcaacaccaccacgcagcccccaacgctcttcctcagcgatggctttacccaagtcatcaacagcatcggggccgccggctatgtctatgtgaacttttcacttgacatccctatgagatctggtgtcgatctgtacaatgtgtcatggacggtacctggcgattctttctccgtacgtgacagtgcaagggtaaccatcggacatggcaactttgatgtatacttgctcgatgcctacagttcgaagaggataatcttgtgttcgcttacccagcctaccattattgatgacaccagtgacgagggtgagtgccaacggaatattcccatcgtccgtggttttcaactccagtttgtccatcggcatgaacacggcgaaggccagcgaaccagtgtcgacagcgtcagaatcgagaacgacggcgtgcgacttgggtgggccattgtggatcattcgacgtgcgctgaagccaagcgtgacaagagcagctatgcctgtgccagcaagcacagccggtgcgatgataacctgagctttacagcttcccgtgctggttacttatgcaagtgcaccgatgggtatcaagggaacccgtatgcacccaatggctgccggcgtgatgtaggattgccggacgcaagatatgatcggtttccgagtaagaacaattgtagcccgtcatgtggaaatatcagcgttccatatccatttggcctagaaaaaggctgctctgcaaatcagcatttcctgctcagatgcacctactacaaagacaacaagagtacaaaccctgacctcttgtggtgggcaacaagatacaccgacgagccgtcaacaccgaccaagcttgttcgcatagatatcagcgaaggactcattatcttggccggtgagcactacgaggagttccttgccatggatggtacggctagtgctagagtctccgatggttcagcaaaggactttgtggttaagaatctgcattttgccatcacaaaccaaacctgcaaagaggcgcagcagaataccaccggatatgcatgtgtcagcgttaacagtacgtgtttggccgtcaacacaggtgatgggtatattggttataggtgcaagtgcaagcatggctttgaagggaatccgtatatcaaagatggttgccaagatgttgacgaatgctccactgcaccaggcatctgtccagaaatatgcaataatactgtcggtaactacatttgcatcaagtgccctgctaaatcagagtacaatgacaaaaccaagcggtgcactccagtgaaaaagcaaaaaaatcttctttttggtatcgtcatcggacttagtgctggctttggaattctactgcctggcttaagcgcaaaaatgctcttccataaatggaataaaggtatccaaaagcggctacgtaggaagaattttcgtaagaacgaaggacttctcctagaacaactaatatcgtgtgatgaaaccactactgatagaatgaatatcttcactttagaagagctagaaaaggctacaaacaactttgatcacacaagaatacttggccaaggaggacacggtacggtaaggccattaagtgagattgttaccactaagatatacgaagaagcaacagaggaagagattaacaatgttaccttgcttgcggagatgtgcttgagtccccgaggcgaagaaagacctaccatgaagcaagtagagatgacattacagtccttgcgcaatgttacacagacaacggctgttcaccgtgctaatgcatcggatcagctgagccaaagatgctatagcctagagcatgagttcattgcttcagctgagctaccacgctaa
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| Protein seq | MAAVVVDVLLACLALLLPASSCAAGAPTVAAAQTSAGAGGGYGAGCAKSCGDLTFDYPFGIGAGCARGHDFQLVCNTTTQPPTLFLSDGFTQVINSIGAAGYVYVNFSLDIPMRSGVDLYNVSWTVPGDSFSVRDSARVTIGHGNFDVYLLDAYSSKRIILCSLTQPTIIDDTSDEGECQRNIPIVRGFQLQFVHRHEHGEGQRTSVDSVRIENDGVRLGWAIVDHSTCAEAKRDKSSYACASKHSRCDDNLSFTASRAGYLCKCTDGYQGNPYAPNGCRRDVGLPDARYDRFPSKNNCSPSCGNISVPYPFGLEKGCSANQHFLLRCTYYKDNKSTNPDLLWWATRYTDEPSTPTKLVRIDISEGLIILAGEHYEEFLAMDGTASARVSDGSAKDFVVKNLHFAITNQTCKEAQQNTTGYACVSVNSTCLAVNTGDGYIGYRCKCKHGFEGNPYIKDGCQDVDECSTAPGICPEICNNTVGNYICIKCPAKSEYNDKTKRCTPVKKQKNLLFGIVIGLSAGFGILLPGLSAKMLFHKWNKGIQKRLRRKNFRKNEGLLLEQLISCDETTTDRMNIFTLEELEKATNNFDHTRILGQGGHGTVRPLSEIVTTKIYEEATEEEINNVTLLAEMCLSPRGEERPTMKQVEMTLQSLRNVTQTTAVHRANASDQLSQRCYSLEHEFIASAELPR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.079247 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0310400 | RBH | 0.000000 | 0.069271 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g24510 | RBH | 0.070982 | 0.037697 | 0.066039 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0310400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0007510 | RBH | 0.620017 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0008160 | RBH | 0.101591 | 0.0 | 0.139685 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0007920 | RBH | 0.360108 | 0.0 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0007620 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0007790 | RBH | 0.841798 | 0.0 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0227800 | RBH | 0.3449765 | 0.0271665 | 0.017423 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0007520 | RBH | 0.000000 | 0.0 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0228300 | RBH | 0.4693355 | 0.0140475 | 0.0361 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0007590 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0007670 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0007540 | RBH | 0.106444 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0007910 | RBH | 0.000000 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G007540 | RBH | 0.074888 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0007650 | RBH | 0.0 | 0.0 | 0.0 |
