Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_03g0037410 | OGI:03091910 | 15/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr03:35935318-35945004 | ||||||||
| Gene Symbol | MEL1, mel1, OsMEL1, MEAL1, OsMEAL1, OsAGO5c, AGO13, OsAGO13 | ||||||||||
| DNA seq | atggcggcctaccgcgacggaggcggtggccgcggcgaccccagcggtgggggaggcggcggcggcgctggagccccgccgtaccgtcccgctgctggctccgtgtggtcgctgccggggatgacgccgcggccgccagggcctcctccgaagtaccagcaacccgggcaccagccggccgtcgtctacagggcgccgtcggccaaggaggtcgagcagaagctgttcgtgtcggagaccgcgctagcgccacccgcagcggcggcgtccgcgtccgctggcgaggcgccggtgtcgaagaaggggctcgcccaccctgcgcggcggccggggttcggagcggccgggaacgaggtgatgatccgcgcgaaccgcttcctcgtcaacgtcgccgacaacaacctcttccactacgatgtgagctcacattacccggcctcttcctctccttcccacccccagatctacgtgtactccatgcatgccgtttactactgtgctcccgtggattttggatctgtttaatttacctctgtatggGTgtgtgtatgcacgtattttggatgctttttgtttccttgtgtcgttgcaagttcgtttctctgattctttcatttgcagtttgtatggagcgtggcttccaatctcatccagttcgtgggtgtttggtcggagcgtcgcgtttcctttcttgcataaagtttctggtccgttttttgatccttccctttttgtttggtcttttccacttcggtgctcgctgctagtttggtgctagagatctggctgatgtcgagagaaatctcgtggccgcagcacacgcagctcaccattcgaacttcgaatcgaagccttccgttgtgttcgtttcggtgacatgcatgcacatgtactacgcataaagcatatcatgtgctcaacgcccggcctacatgcatgtcgtcgttttcttgagaacgttggtgctgtgttttggaaatgctgatttcgtacaagggtcggcctgatctctccctcgtgagagctagttcgggtctttccctctgcaagcaaaggtctgctcggttcagtgcttttgcatctcgttttgtgctgctttacaagtTAttatgtttcttttgtgtgtgagagatggaagaagacgacgaagcccctctgtgcccgttcactacctctcggtttgactttttttttgttgttttttggagactgctctttttgtgtaagcggatgtgttcgcgcgagcttctagctgctttcttgtaagaacatgctaatctgttcttcatgtaattaagcgaagcctttgcgtgaacttttacatcaagtcgtcgtcactgaacgcctggtagattccctttttctgatcttcggcaaacactccatccgaaagattgtcgctggaatggttgcagaaatagagtggtgatccacttttaaaatatctgtgaatacatatgtggcttttggttctgtgttttctgcTtttttttttggagtagctatatttatggcaccatatttttcaccaaaaaATagtcagcatatatttacattataagtccctaaattatatatgtaattatagtgtaagtgctatataagtgccgtgtaagtgaataaattacatatgtaattatagtgtaagtgccgtgtaagtgaatgtaagtgggtggtaattagtgtataagtactttaaaattcaatattaatttgttttggcaataaagtgaatggcaataccgtgctcggttggttaggagctctgtctgcgacttcgaaggtctgggttcgactctccgtcacgacgccttatgatttttctttgcactagcacgaatctcgatgtaaatcgtactgtcacaaaatcgactattttttgacaaaaaaactggcgacatatttttagcaaATCtTttttttttggcatttttttttgaaaaTtttaattgttgtctttgtcgggatctcgttcttttttattccatgcgaaaaaaaACcAgtcgtgttcaacagtaagacatcgagttatagacttgttccgatgattttttttttttgtccaATtacgtttttcagtccctttctatgTttttgggctttcgaagatgtcgatttctgatttctgagctgtggcccAgtttatgtgggcttttgtgggccttagaagaccctatatcatccatccttcatgttctaacctagctataatcttcaactctcactatccattcttccCTccccattattcctcaacgcttcgccggcgattcccctctagactctagcgttcgccatggatgcccgccccatgtaagtgtcgtaccccgtagtatagcaGcgtagttctacctctatcgtgatttgaatggagaagatcaacctctatcaccttttttttgttgtttgatttctgttggtccttgaTttaggtttcgttacttttgggcattcagttttttttggtggttttcgcctacattgatttccacaatcaataggctctgatctgaacgaaacacactgaattttgagtagtttggtgtgTtagtgatggctaactgctctgatctaaaattactttgttattatgtgatgttcatctgtcgagttcttcttattttgccctaagatcttctctgtaaaaaaaaaaaaatctgcccctcatgtcctatAGaaaggctgtttatcttccttttGgattatgttAcaggtttcaatcaatcctgagtcAaaatcaagagcAacaaatagggaagtactcaatgagctcatcaagttgcatgggaagacatctcttggtGgcaaattgcctgcttatgatggaagaaaaagtctctatactgctggttcactcccttttgaatcGgaggaGtttgtggttaagctaattgatcccgaaaAGaaggatgaatcccTtttgaatcggaggagtttgtGgttaagctaattgatcccgaaaagaaGgatAaagaaaggtttgtatgatgctagctagatattttcgttcttatgaattatgtgttttgcagtctcagattattgtttattgtcttctgcagggcggagagggtgtacaagatcacaattcggattgctggcagaacagacttctaccacctccagcagtttttggttggaagacagagggataTGCcccaagaaaccattcAagtcattgatgttgtcctcaggtagtcgccatcttggaagtatgatttttttgttgtgtttgttttgacttttgcttgattatttactgactagggtactaataatgctgtattgacaactacttgttctgcagttatgtcacagtgtccagatccttcttctctacccagtttggtcAccggggtgacaTtggtgagggacttgagtgttggagaggttactatcagagcctgcgcccaacacagatgggcctttcgctgaatataggtacttacctgtcagttattgtttatcagttttcgctgaatggaagtgatcttttcagatactaactactgttcggtatgcttcattcagatatatctgcaacatcattttttaagcctgtgacagtgatccaatttgtggaggagttcctgaacatacgtgacacctcaagacctttgtcagaccgggatcgtgtgaaggtaatattcctactgatggaattcataaaattatgcaatactgatactaactcatttttcatgatgttcagataaagaaagcattacgtggggttcgcattgaaacaaaccaccaagaggaccaaatcagaagatacaagataacagggattacccccattcctatgagccagctgatgtacttatctttcctctgcttctgctataattatctttttgtttacatgctgtaagatacagcaaatcaatgtagattgttgatggaatatttgaaatgtctttgtttatggatcttgggcatggtagtacattaattgtttgtggacttgtgatagaaacattttaatccttttcaaaggttTAtgccttagatatcAatttatgcgcctttgatatccatactgtcaatGttgttaaatgtccttcaatgtgcctttgatatctataaatgctgttaaatgtccttcaatgttctaaattgatgtgtaaaggatgattgcacactgtcctgagaatagcagtgctttgtcatccttttttaggacctgcattttgttatcatgcttgttcactgttttatagcatgaacataacttgtttttctccaaactgatgcctggtttgatgttgttagatttcctgttgatgataatgggacaaggaagactgttgttcagtacttctgggataggtacaattacagactgaagtatgcttcTtggccctgcctacagtctggcagtgattctcgtcctgtatacttgcctatggaggtattgattcatcatccatttacctctacctgaattgtgcatgctgtgtgcagtttgttcatgcAaatgtggttgcaggtgtgcaagattgtaGaagggcagaggtactccaagaagcttaacaacaaacaggtgaccaacatccttagagcaacctgtcaacgcccccagcagagggaacagagaattcatgaggtacaataccatgtagatgcagagccaaatttttatgcttttggattttggctcacatttgaatgaccttctatttctgcacattttcttagaataacatatccgtagaacataaggctattttttttcttgatgagataatgAagataatatcatatatttgtattgacttccatttcatcttctatcagatggttctccacaacaagtatacagatgataggtttgctcaggagttcggcatcaaggtctgcaatgacctagtctctgttccagcccgtgtgctgcctccacccatggtactatataggttttattccatttcttttgttcgcattgtttaaacttctgggaatttctaacaaccttAatctttgcgcTtttcagttgaagtatcatgattctggaagggagaaaacttgtgcacccagtgttggacagtGgaacatgattaacaaggtgatgccttgctttattattacaacttaatttctctctcaagttAattttgtattgcctttgtttgaaagtgaattctaggtacacttgcttaacttctttatgaattgctcattagctttattttttgttggagagtatctgaaattgacaagccggtactgaaacataatttcagaacctgtaaagatacaactacttagccaacataatttactttctgatgtgtttaaaggaagactctaatacttgttaattttttcagaaaatgatcaatggaggaactgtggataactggacatgtctgagtttttcacgaatgcgtccagaggaggtacaaaggttctgtggtgacctgattcagatgtgcaatgccactggaatggtaactcctgcatagttacaatgctattaaagcaGtttaataattatatgtgctgcaattaactttgacttgaccttgtagtctttcaatccaagaccagttgtggatgtccggtcatcaaatcctaacaatatagagaatgctctgagggatgttcacagcagaacatcagaactgctagccagagaGGgaaagggaggcctgcagcttttaattgtaattctgcttgaagttagtggttcttatggtatgtatattgttggttgggtaatctaaatttccattccctgattttttttattaaatgtagtatatgcatgatttttAcagggaaaattaaaagggtatgtgagaatgaccttggcattgtatctcaatgttgtttgccaaggcatgccagcaggccgaacaagcaatatttggaaaatgttgcactcaaaatcaatgtcaaggtctgtaaatctgctgggcttgtatttttttccccttgaagtataccaattctgtggactttatcttgtgtgcttttagtgttctcccccagaaATatgacaattctgtgccataaccaggtcggagggcgcaacactgttcttgagcgagcctttatccgcaatggcataccatttgtgtcagaagtcccaacaatcatctttggtgctgatgtcacacactctccacctggagaggactctgcatcatctattgctGcggttagtacattcctagctaatggttcttcaattcattacttggtctatttgatgctgtcctacaatataagatcatgggctatcctgtgcataacttgatgcaatagatgaactatctttttcttcccaaagtttattgcttcgcagatgcaaactttactggtattattttctttgtggtcatgtaggttgtggcatcaatggattggcctgaaatcaccaaataccgaggtctggtctctgctcaatcacatagacaggagataatagaagatctctttagtgttggtaaagatccagtgaaggttgtaaatggtGggatgatcaggtaaaatttgtggttaatctggtattgcaattgtatattatcgtaggttcatctgggaactgaccattatgctcttgtttacagggagttccttatcgcattccgcaagaagactggcagaaggcctgagaggataatcttctataggtatgtcctgcaaattctgttctgttcagtggtatgtccagttaaatgaaatttgttgagtggtcattctcctctacagagatggtgtaagtgaaggtcagttcagccgtgtgcttcttcatgaaatggatgccatcagaaaggtgagcttcgcatcatgataaatctgtctgtgttatctattctggacaagccaatttcattgttttttctgagtttaatccatttacattgcaaggcttgtgcatctttggaggagggatatctaccacctgtcacatttgtagtagtccagaaaaggcatcacacaaggcttttcccagaggttcatgggaggcgagacatgactgacaagagcggaaacatccttcctggtcagtgttcttgttggttgctactgagaacatacgtctgctacttcttcaggcatttgataattggatatattgttgtaatctgtttctttttggtcctgcaggaactgtcaaggaccgccagatttgccatcctacagagttctatttctacctgtgtagccatgctggcatacaggtaaacccatgctggaagctgtttgcagattgcacaaatttttccagcctacaaaattttcagttaatgtgtgctgttgacattccttttctcagggtactagcaggccaactcattaccatgtcctttatgatgaGaaccattttacagctgatgaacttcagaccctgaccaacaatctttgctatatgtaagttcatctctctctatctccacttagttgcttagctcccttagtctttcggctgcctcaactctgataattcctactgttggcaaaatgcagctatgcacgatgcacccatgcagtgtctgtGggtgagtcttcttttcttgcatcTttgtttctttttatttctgcatcttcgtagatatgctaccttaacagatgtatacactagtttctgtgaatggttttactgtgaattggactaatcttattagcatattattctcaacaatacagattcttatttagcatgtttgaaattgggtctttgTttactttaatgcactcaatccatcatgtgatatgcttttaacgagaagtgcactactgtcatcttgttatgcgccaccaatgcgtgcggctcattagctcagcccaggtgctgaaggaaacacgacctaaggaactacagaaataTtttctttactttgttttcctcgctgctaatgcaccatcgatgtcatcatgttagctgttgctcaacatttgcttttcaaatccattgcattcatatcctagcctcgtctttgtgatgctcccatattactctctggaactagcAaatgaactatAGAagaaatattttctttcccttgtttttttcgctgctgattgagtgcttctttttctttctgtgcagtcccaccggcctattattctcatcttgctgcatcacatGcacactgctgcattaaaggacatagttcaggtagtggctcAacccctggcaatgagcatgacatagttaaaaattctgctccaacactccaggtaactaagggactgttttcctatgtagtaTTTttttttttactttaattcatttgggatgcatacatatatttcagttaaaagagtgactaaccagggaactaaatttcatgcctcacagatccttgtcaaagtgctggacttccaaacagttccactgacaatgaaactgaagtcttcagctgaagacattgtagctttagctctatcaaaacatcgcgtctctctgcatgatgtctatgtctaccatggtaggcgagttattgccaagagcttgactcttgaatctttaaaagcagacagggattcaacttttcttataatgccacgtatgaggggtggatgcAatgatacGTAAgtatattttctttcatctattgcaataattatttttttacttttgaattttgttctcttatgatagataaattttaaaatgtaggattggcggtttcaagtgcattcctttagaacaacATatcagatcattaggtgattccctttttgaaatcatatggataccaccagatctgcgagtgagcgggttctgttcatatcttatcatacttggaaaaccagcaagaaaaatcatctgccaacttttaaagttgttggagattatccatgctgccaacagatttgcttccaggtttacaatagctgatctggtgttcctccctgatctgggttgtatagcttttaagaaaggagtaaaaataaggtggaacctcaggagagaGgagtacaaactcaacatgggtgatgtagctagcataattagctgctggttcaggtttaaccgcaggaagcttgaagcgctggaagcagggatccatgagcttcgtcctggccaaggtgactctccaatgtttgttgatatattagttaaggatcttagaagccccacacatgagactggtctcagtgccaattatagaggtttctacAaaaattgtagtgctctgagatcttgttcggcccacatgaatttgttcacctctttggacattcataaggacttcatggttggttctgctgattGgggtaattttgtcaaggctttgggtgatatcaaacttccaggctggtatcgtactgctatgcgatcacctgaaatgaggaaagtactcttctttgagtttaatgatccacatactggggagatacgaggcaaaagatatcgtgccttatcagttttttcatggcttgaatttgcgcggatatttattaagcacatgaaGaaagggctggtaaaatcactaacctcatacatgttttagtatagacttttatttgatggttttacttgatggttctaatatagacttttattttttgaagtgtaccgatAaacaggcaacagcacttctctgtgtgatattctcgaatattgtacctgttgtggagaagaaacttacttacagttacaggccaccagctaaggagaagagcaatgaaagctttacagttgaagaaatcctggacccatcatag
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| CDS seq | atggcggcctaccgcgacggaggcggtggccgcggcgaccccagcggtgggggaggcggcggcggcgctggagccccgccgtaccgtcccgctgctggctccgtgtggtcgctgccggggatgacgccgcggccgccagggcctcctccgaagtaccagcaacccgggcaccagccggccgtcgtctacagggcgccgtcggccaaggaggtcgagcagaagctgttcgtgtcggagaccgcgctagcgccacccgcagcggcggcgtccgcgtccgctggcgaggcgccggtgtcgaagaaggggctcgcccaccctgcgcggcggccggggttcggagcggccgggaacgaggtgatgatccgcgcgaaccgcttcctcgtcaacgtcgccgacaacaacctcttccactacgatgtttcaatcaatcctgagtcAaaatcaagagcAacaaatagggaagtactcaatgagctcatcaagttgcatgggaagacatctcttggtGgcaaattgcctgcttatgatggaagaaaaagtctctatactgctggttcactcccttttgaatcGgaggaGtttgtggttaagctaattgatcccgaaaAGaaggatgaatcccTtttgaatcggaggagtttgtGggcggagagggtgtacaagatcacaattcggattgctggcagaacagacttctaccacctccagcagtttttggttggaagacagagggataTGCcccaagaaaccattcAagtcattgatgttgtcctcagttatgtcacagtgtccagatccttcttctctacccagtttggtcAccggggtgacaTtggtgagggacttgagtgttggagaggttactatcagagcctgcgcccaacacagatgggcctttcgctgaatatagatatatctgcaacatcattttttaagcctgtgacagtgatccaatttgtggaggagttcctgaacatacgtgacacctcaagacctttgtcagaccgggatcgtgtgaagataaagaaagcattacgtggggttcgcattgaaacaaaccaccaagaggaccaaatcagaagatacaagataacagggattacccccattcctatgagccagctgatgtacttatctttcctctgcttctgctataattatctttttgtttacatgctatttcctgttgatgataatgggacaaggaagactgttgttcagtacttctgggataggtacaattacagactgaagtatgcttcTtggccctgcctacagtctggcagtgattctcgtcctgtatacttgcctatggaggtgtgcaagattgtaGaagggcagaggtactccaagaagcttaacaacaaacaggtgaccaacatccttagagcaacctgtcaacgcccccagcagagggaacagagaattcatgagatggttctccacaacaagtatacagatgataggtttgctcaggagttcggcatcaagttgaagtatcatgattctggaagggagaaaacttgtgcacccagtgttggacagtGgaacatgattaacaagaaaatgatcaatggaggaactgtggataactggacatgtctgagtttttcacgaatgcgtccagaggaggtacaaaggttctgtggtgacctgattcagatgtgcaatgccactggaatgtctttcaatccaagaccagttgtggatgtccggtcatcaaatcctaacaatatagagaatgctctgagggatgttcacagcagaacatcagaactgctagccagagaGGgaaagggaggcctgcagcttttaattgtaattctgcttgaagttagtggttcttatgggaaaattaaaagggtatgtgagaatgaccttggcattgtatctcaatgttgtttgccaaggcatgccagcaggccgaacaagcaatatttggaaaatgttgcactcaaaatcaatgtcaaggtcggagggcgcaacactgttcttgagcgagcctttatccgcaatggcataccatttgtgtcagaagtcccaacaatcatctttggtgctgatgtcacacactctccacctggagaggactctgcatcatctattgctGcggttgtggcatcaatggattggcctgaaatcaccaaataccgaggtctggtctctgctcaatcacatagacaggagataatagaagatctctttagtgttggtaaagatccagtgaaggttgtaaatggtGggatgatcagggagttccttatcgcattccgcaagaagactggcagaaggcctgagaggataatcttctatagagatggtgtaagtgaaggtcagttcagccgtgtgcttcttcatgaaatggatgccatcagaaaggcttgtgcatctttggaggagggatatctaccacctgtcacatttgtagtagtccagaaaaggcatcacacaaggcttttcccagaggttcatgggaggcgagacatgactgacaagagcggaaacatccttcctggaactgtcaaggaccgccagatttgccatcctacagagttctatttctacctgtgtagccatgctggcatacagggtactagcaggccaactcattaccatgtcctttatgatgaGaaccattttacagctgatgaacttcagaccctgaccaacaatctttgctatatctatgcacgatgcacccatgcagtgtctgtGgtcccaccggcctattattctcatcttgctgcatcacatGcacactgctgcattaaaggacatagttcaggtagtggctcAacccctggcaatgagcatgacatagttaaaaattctgctccaacactccagatccttgtcaaagtgctggacttccaaacagttccactgacaatgaaactgaagtcttcagctgaagacattgtagctttagctctatcaaaacatcgcgtctctctgcatgatgtctatgtctaccatggtaggcgagttattgccaagagcttgactcttgaatctttaaaagcagacagggattcaacttttcttataatgccacgtatgaggggtggatgcAatgatacgattggcggtttcaagtgcattcctttagaacaacATatcagatcattaggtgattccctttttgaaatcatatggataccaccagatctgcgagtgagcgggttctgttcatatcttatcatacttggaaaaccagcaagaaaaatcatctgccaacttttaaagttgttggagattatccatgctgccaacagatttgcttccaggtttacaatagctgatctggtgttcctccctgatctgggttgtatagcttttaagaaaggagtaaaaataaggtggaacctcaggagagaGgagtacaaactcaacatgggtgatgtagctagcataattagctgctggttcaggtttaaccgcaggaagcttgaagcgctggaagcagggatccatgagcttcgtcctggccaaggtgactctccaatgtttgttgatatattagttaaggatcttagaagccccacacatgagactggtctcagtgccaattatagaggtttctacAaaaattgtagtgctctgagatcttgttcggcccacatgaatttgttcacctctttggacattcataaggacttcatggttggttctgctgattGgggtaattttgtcaaggctttgggtgatatcaaacttccaggctggtatcgtactgctatgcgatcacctgaaatgaggaaagtactcttctttgagtttaatgatccacatactggggagatacgaggcaaaagatatcgtgccttatcagttttttcatggcttgaatttgcgcggatatttattaagcacatgaaGaaagggctgtgtaccgatAaacaggcaacagcacttctctgtgtgatattctcgaatattgtacctgttgtggagaagaaacttacttacagttacaggccaccagctaaggagaagagcaatgaaagctttacagttgaagaaatcctggacccatcatag
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| Protein seq | MAAYRDGGGGRGDPSGGGGGGGAGAPPYRPAAGSVWSLPGMTPRPPGPPPKYQQPGHQPAVVYRAPSAKEVEQKLFVSETALAPPAAAASASAGEAPVSKKGLAHPARRPGFGAAGNEVMIRANRFLVNVADNNLFHYDVSINPESKSRATNREVLNELIKLHGKTSLGGKLPAYDGRKSLYTAGSLPFESEEFVVKLIDPEKKDESLLNRRSLWAERVYKITIRIAGRTDFYHLQQFLVGRQRDMPQETIQVIDVVLSYVTVSRSFFSTQFGHRGDIGEGLECWRGYYQSLRPTQMGLSLNIDISATSFFKPVTVIQFVEEFLNIRDTSRPLSDRDRVKIKKALRGVRIETNHQEDQIRRYKITGITPIPMSQLMYLSFLCFCYNYLFVYMLFPVDDNGTRKTVVQYFWDRYNYRLKYASWPCLQSGSDSRPVYLPMEVCKIVEGQRYSKKLNNKQVTNILRATCQRPQQREQRIHEMVLHNKYTDDRFAQEFGIKLKYHDSGREKTCAPSVGQWNMINKKMINGGTVDNWTCLSFSRMRPEEVQRFCGDLIQMCNATGMSFNPRPVVDVRSSNPNNIENALRDVHSRTSELLAREGKGGLQLLIVILLEVSGSYGKIKRVCENDLGIVSQCCLPRHASRPNKQYLENVALKINVKVGGRNTVLERAFIRNGIPFVSEVPTIIFGADVTHSPPGEDSASSIAAVVASMDWPEITKYRGLVSAQSHRQEIIEDLFSVGKDPVKVVNGGMIREFLIAFRKKTGRRPERIIFYRDGVSEGQFSRVLLHEMDAIRKACASLEEGYLPPVTFVVVQKRHHTRLFPEVHGRRDMTDKSGNILPGTVKDRQICHPTEFYFYLCSHAGIQGTSRPTHYHVLYDENHFTADELQTLTNNLCYIYARCTHAVSVVPPAYYSHLAASHAHCCIKGHSSGSGSTPGNEHDIVKNSAPTLQILVKVLDFQTVPLTMKLKSSAEDIVALALSKHRVSLHDVYVYHGRRVIAKSLTLESLKADRDSTFLIMPRMRGGCNDTIGGFKCIPLEQHIRSLGDSLFEIIWIPPDLRVSGFCSYLIILGKPARKIICQLLKLLEIIHAANRFASRFTIADLVFLPDLGCIAFKKGVKIRWNLRREEYKLNMGDVASIISCWFRFNRRKLEALEAGIHELRPGQGDSPMFVDILVKDLRSPTHETGLSANYRGFYKNCSALRSCSAHMNLFTSLDIHKDFMVGSADWGNFVKALGDIKLPGWYRTAMRSPEMRKVLFFEFNDPHTGEIRGKRYRALSVFSWLEFARIFIKHMKKGLCTDKQATALLCVIFSNIVPVVEKKLTYSYRPPAKEKSNESFTVEEILDPS |
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| Function | Protein argonaute 13 [UniProtKB/Swiss-Prot:Q852N2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_03g0037410 | OsLima_03g0037410.01 | Chr03 | 35935318 | 35945004 | + | NAM | ||
| CDS seq | atggcggcctaccgcgacggaggcggtggccgcggcgaccccagcggtgggggaggcggcggcggcgctggagccccgccgtaccgtcccgctgctggctccgtgtggtcgctgccggggatgacgccgcggccgccagggcctcctccgaagtaccagcaacccgggcaccagccggccgtcgtctacagggcgccgtcggccaaggaggtcgagcagaagctgttcgtgtcggagaccgcgctagcgccacccgcagcggcggcgtccgcgtccgctggcgaggcgccggtgtcgaagaaggggctcgcccaccctgcgcggcggccggggttcggagcggccgggaacgaggtgatgatccgcgcgaaccgcttcctcgtcaacgtcgccgacaacaacctcttccactacgatgtttcaatcaatcctgagtcAaaatcaagagcAacaaatagggaagtactcaatgagctcatcaagttgcatgggaagacatctcttggtGgcaaattgcctgcttatgatggaagaaaaagtctctatactgctggttcactcccttttgaatcGgaggaGtttgtggttaagctaattgatcccgaaaAGaaggatgaatcccTtttgaatcggaggagtttgtGggcggagagggtgtacaagatcacaattcggattgctggcagaacagacttctaccacctccagcagtttttggttggaagacagagggataTGCcccaagaaaccattcAagtcattgatgttgtcctcagttatgtcacagtgtccagatccttcttctctacccagtttggtcAccggggtgacaTtggtgagggacttgagtgttggagaggttactatcagagcctgcgcccaacacagatgggcctttcgctgaatatagatatatctgcaacatcattttttaagcctgtgacagtgatccaatttgtggaggagttcctgaacatacgtgacacctcaagacctttgtcagaccgggatcgtgtgaagataaagaaagcattacgtggggttcgcattgaaacaaaccaccaagaggaccaaatcagaagatacaagataacagggattacccccattcctatgagccagctgatgtacttatctttcctctgcttctgctataattatctttttgtttacatgctatttcctgttgatgataatgggacaaggaagactgttgttcagtacttctgggataggtacaattacagactgaagtatgcttcTtggccctgcctacagtctggcagtgattctcgtcctgtatacttgcctatggaggtgtgcaagattgtaGaagggcagaggtactccaagaagcttaacaacaaacaggtgaccaacatccttagagcaacctgtcaacgcccccagcagagggaacagagaattcatgagatggttctccacaacaagtatacagatgataggtttgctcaggagttcggcatcaagttgaagtatcatgattctggaagggagaaaacttgtgcacccagtgttggacagtGgaacatgattaacaagaaaatgatcaatggaggaactgtggataactggacatgtctgagtttttcacgaatgcgtccagaggaggtacaaaggttctgtggtgacctgattcagatgtgcaatgccactggaatgtctttcaatccaagaccagttgtggatgtccggtcatcaaatcctaacaatatagagaatgctctgagggatgttcacagcagaacatcagaactgctagccagagaGGgaaagggaggcctgcagcttttaattgtaattctgcttgaagttagtggttcttatgggaaaattaaaagggtatgtgagaatgaccttggcattgtatctcaatgttgtttgccaaggcatgccagcaggccgaacaagcaatatttggaaaatgttgcactcaaaatcaatgtcaaggtcggagggcgcaacactgttcttgagcgagcctttatccgcaatggcataccatttgtgtcagaagtcccaacaatcatctttggtgctgatgtcacacactctccacctggagaggactctgcatcatctattgctGcggttgtggcatcaatggattggcctgaaatcaccaaataccgaggtctggtctctgctcaatcacatagacaggagataatagaagatctctttagtgttggtaaagatccagtgaaggttgtaaatggtGggatgatcagggagttccttatcgcattccgcaagaagactggcagaaggcctgagaggataatcttctatagagatggtgtaagtgaaggtcagttcagccgtgtgcttcttcatgaaatggatgccatcagaaaggcttgtgcatctttggaggagggatatctaccacctgtcacatttgtagtagtccagaaaaggcatcacacaaggcttttcccagaggttcatgggaggcgagacatgactgacaagagcggaaacatccttcctggaactgtcaaggaccgccagatttgccatcctacagagttctatttctacctgtgtagccatgctggcatacagggtactagcaggccaactcattaccatgtcctttatgatgaGaaccattttacagctgatgaacttcagaccctgaccaacaatctttgctatatctatgcacgatgcacccatgcagtgtctgtGgtcccaccggcctattattctcatcttgctgcatcacatGcacactgctgcattaaaggacatagttcaggtagtggctcAacccctggcaatgagcatgacatagttaaaaattctgctccaacactccagatccttgtcaaagtgctggacttccaaacagttccactgacaatgaaactgaagtcttcagctgaagacattgtagctttagctctatcaaaacatcgcgtctctctgcatgatgtctatgtctaccatggtaggcgagttattgccaagagcttgactcttgaatctttaaaagcagacagggattcaacttttcttataatgccacgtatgaggggtggatgcAatgatacgattggcggtttcaagtgcattcctttagaacaacATatcagatcattaggtgattccctttttgaaatcatatggataccaccagatctgcgagtgagcgggttctgttcatatcttatcatacttggaaaaccagcaagaaaaatcatctgccaacttttaaagttgttggagattatccatgctgccaacagatttgcttccaggtttacaatagctgatctggtgttcctccctgatctgggttgtatagcttttaagaaaggagtaaaaataaggtggaacctcaggagagaGgagtacaaactcaacatgggtgatgtagctagcataattagctgctggttcaggtttaaccgcaggaagcttgaagcgctggaagcagggatccatgagcttcgtcctggccaaggtgactctccaatgtttgttgatatattagttaaggatcttagaagccccacacatgagactggtctcagtgccaattatagaggtttctacAaaaattgtagtgctctgagatcttgttcggcccacatgaatttgttcacctctttggacattcataaggacttcatggttggttctgctgattGgggtaattttgtcaaggctttgggtgatatcaaacttccaggctggtatcgtactgctatgcgatcacctgaaatgaggaaagtactcttctttgagtttaatgatccacatactggggagatacgaggcaaaagatatcgtgccttatcagttttttcatggcttgaatttgcgcggatatttattaagcacatgaaGaaagggctgtgtaccgatAaacaggcaacagcacttctctgtgtgatattctcgaatattgtacctgttgtggagaagaaacttacttacagttacaggccaccagctaaggagaagagcaatgaaagctttacagttgaagaaatcctggacccatcatag
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| Protein seq | MAAYRDGGGGRGDPSGGGGGGGAGAPPYRPAAGSVWSLPGMTPRPPGPPPKYQQPGHQPAVVYRAPSAKEVEQKLFVSETALAPPAAAASASAGEAPVSKKGLAHPARRPGFGAAGNEVMIRANRFLVNVADNNLFHYDVSINPESKSRATNREVLNELIKLHGKTSLGGKLPAYDGRKSLYTAGSLPFESEEFVVKLIDPEKKDESLLNRRSLWAERVYKITIRIAGRTDFYHLQQFLVGRQRDMPQETIQVIDVVLSYVTVSRSFFSTQFGHRGDIGEGLECWRGYYQSLRPTQMGLSLNIDISATSFFKPVTVIQFVEEFLNIRDTSRPLSDRDRVKIKKALRGVRIETNHQEDQIRRYKITGITPIPMSQLMYLSFLCFCYNYLFVYMLFPVDDNGTRKTVVQYFWDRYNYRLKYASWPCLQSGSDSRPVYLPMEVCKIVEGQRYSKKLNNKQVTNILRATCQRPQQREQRIHEMVLHNKYTDDRFAQEFGIKLKYHDSGREKTCAPSVGQWNMINKKMINGGTVDNWTCLSFSRMRPEEVQRFCGDLIQMCNATGMSFNPRPVVDVRSSNPNNIENALRDVHSRTSELLAREGKGGLQLLIVILLEVSGSYGKIKRVCENDLGIVSQCCLPRHASRPNKQYLENVALKINVKVGGRNTVLERAFIRNGIPFVSEVPTIIFGADVTHSPPGEDSASSIAAVVASMDWPEITKYRGLVSAQSHRQEIIEDLFSVGKDPVKVVNGGMIREFLIAFRKKTGRRPERIIFYRDGVSEGQFSRVLLHEMDAIRKACASLEEGYLPPVTFVVVQKRHHTRLFPEVHGRRDMTDKSGNILPGTVKDRQICHPTEFYFYLCSHAGIQGTSRPTHYHVLYDENHFTADELQTLTNNLCYIYARCTHAVSVVPPAYYSHLAASHAHCCIKGHSSGSGSTPGNEHDIVKNSAPTLQILVKVLDFQTVPLTMKLKSSAEDIVALALSKHRVSLHDVYVYHGRRVIAKSLTLESLKADRDSTFLIMPRMRGGCNDTIGGFKCIPLEQHIRSLGDSLFEIIWIPPDLRVSGFCSYLIILGKPARKIICQLLKLLEIIHAANRFASRFTIADLVFLPDLGCIAFKKGVKIRWNLRREEYKLNMGDVASIISCWFRFNRRKLEALEAGIHELRPGQGDSPMFVDILVKDLRSPTHETGLSANYRGFYKNCSALRSCSAHMNLFTSLDIHKDFMVGSADWGNFVKALGDIKLPGWYRTAMRSPEMRKVLFFEFNDPHTGEIRGKRYRALSVFSWLEFARIFIKHMKKGLCTDKQATALLCVIFSNIVPVVEKKLTYSYRPPAKEKSNESFTVEEILDPS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.086675 | 0.000000 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0789500 | RBH | 3.005440 | 2.169755 | 0.384791 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g57560 | RBH | 1.149026 | 0.835275 | 0.260694 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0789500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0037580 | RBH | 0.337890 | 2.936996 | 2.464936 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0037270 | RBH | 0.266323 | 0.276383 | 1.726611 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0037330 | RBH | 1.091077 | 1.497947 | 5.577277 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0037630 | RBH | 0.031136 | 0.027752 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0037110 | RBH | 1.129719 | 0.000000 | 1.333354 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0559800 | RBH | 0.0857645 | 0.0664265 | 1.2579995 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0036910 | RBH | 0.055495 | 0.000000 | 0.054311 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0561700 | RBH | 3.7497065 | 6.189769 | 15.1451695 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0037420 | RBH | 0.099841 | 2.032718 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0037050 | RBH | 0.939079 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0037150 | RBH | 0.153564 | 0.065782 | 0.659694 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0037110 | RBH | 0.028486 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G036940 | RBH | 0.403741 | 0.233216 | 1.464770 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0036720 | RBH | 0.348956 | 3.063745 | 2.605030 |
