Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_02g0035690 | OGI:02093400 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr02:35020468-35021136 | ||||||||
| Gene Symbol | ERF11, OsERF#011, OsERF011, OsERF11, OsDERF9, DERF9, AP2/EREBP#083, AP2/EREBP83, DLN69, OsDLN69 | ||||||||||
| DNA seq | ttagtatcggaagtaggagtctcgcgtgtcaaagctccaaagcgaagcgctgctctcatctacgacgtcgaccatgtcgtcgtcgcacgacggcaacggcggcgacggcggcggcggctgcaagaagtcgtaggcatggccgccgccccagccgggcggcgagtacagcggcggcgggtgcgccatgaccgggcgccagtcgatgctgccgtcggcgcgcacggcgggcgccaccacctcgctgccggtagcgaaccccggcggcggcgacagcgagggcggcgacatgagcgccgcggccgcctgctgcggcgtgacgtgggcgcggttggcgtgggagagcgcggcggcctgcacctgccgcgggtcgctgctgcgggcgtcgcacgacggtggcgagtccgggaagttgaggtcggcgccggcggcgccgtggccgcggagcgtgacgaaggcggcgtcgaacgcccgcgccgccttctccggcgagtcgtaggagcccagccagatgcggtcgcggctattgggcagccggatctccgacacccacttcccccacttccgccgccgcacacccttgtacttcttctccatctccggcggtgacgccgccaccggcgacgacgatgacatcatgcagtgacgttgcacgtacgtgtacgtgctgtg
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| CDS seq | atgatgtcatcgtcgtcgccggtggcggcgtcaccgccggagatggagaagaagtacaagggtgtgcggcggcggaagtgggggaagtgggtgtcggagatccggctgcccaatagccgcgaccgcatctggctgggctcctacgactcgccggagaaggcggcgcgggcgttcgacgccgccttcgtcacgctccgcggccacggcgccgccggcgccgacctcaacttcccggactcgccaccgtcgtgcgacgcccgcagcagcgacccgcggcaggtgcaggccgccgcgctctcccacgccaaccgcgcccacgtcacgccgcagcaggcggccgcggcgctcatgtcgccgccctcgctgtcgccgccgccggggttcgctaccggcagcgaggtggtggcgcccgccgtgcgcgccgacggcagcatcgactggcgcccggtcatggcgcacccgccgccgctgtactcgccgcccggctggggcggcggccatgcctacgacttcttgcagccgccgccgccgtcgccgccgttgccgtcgtgcgacgacgacatggtcgacgtcgtagatgagagcagcgcttcgctttggagctttgacacgcgagactcctacttccgatactaa
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| Protein seq | MMSSSSPVAASPPEMEKKYKGVRRRKWGKWVSEIRLPNSRDRIWLGSYDSPEKAARAFDAAFVTLRGHGAAGADLNFPDSPPSCDARSSDPRQVQAAALSHANRAHVTPQQAAAALMSPPSLSPPPGFATGSEVVAPAVRADGSIDWRPVMAHPPPLYSPPGWGGGHAYDFLQPPPPSPPLPSCDDDMVDVVDESSASLWSFDTRDSYFRY |
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| Function | Ethylene-responsive transcription factor ERF017 [UniProtKB/Swiss-Prot:Q84QC2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_02g0035690 | OsLima_02g0035690.01 | Chr02 | 35020468 | 35021136 | - | NAM | ||
| CDS seq | atgatgtcatcgtcgtcgccggtggcggcgtcaccgccggagatggagaagaagtacaagggtgtgcggcggcggaagtgggggaagtgggtgtcggagatccggctgcccaatagccgcgaccgcatctggctgggctcctacgactcgccggagaaggcggcgcgggcgttcgacgccgccttcgtcacgctccgcggccacggcgccgccggcgccgacctcaacttcccggactcgccaccgtcgtgcgacgcccgcagcagcgacccgcggcaggtgcaggccgccgcgctctcccacgccaaccgcgcccacgtcacgccgcagcaggcggccgcggcgctcatgtcgccgccctcgctgtcgccgccgccggggttcgctaccggcagcgaggtggtggcgcccgccgtgcgcgccgacggcagcatcgactggcgcccggtcatggcgcacccgccgccgctgtactcgccgcccggctggggcggcggccatgcctacgacttcttgcagccgccgccgccgtcgccgccgttgccgtcgtgcgacgacgacatggtcgacgtcgtagatgagagcagcgcttcgctttggagctttgacacgcgagactcctacttccgatactaa
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| Protein seq | MMSSSSPVAASPPEMEKKYKGVRRRKWGKWVSEIRLPNSRDRIWLGSYDSPEKAARAFDAAFVTLRGHGAAGADLNFPDSPPSCDARSSDPRQVQAAALSHANRAHVTPQQAAAALMSPPSLSPPPGFATGSEVVAPAVRADGSIDWRPVMAHPPPLYSPPGWGGGHAYDFLQPPPPSPPLPSCDDDMVDVVDESSASLWSFDTRDSYFRY
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0781300 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g54050 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0781300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0035960 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0036060 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0035920 | RBH | 0.0 | 0.0 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0035490 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0035620 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0541100 | RBH | 0.101617 | 6.3151555 | 0.1572325 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0035450 | RBH | 0.0 | 0.0 | 0.060391 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0571700 | RBH | 0.122706 | 2.469874 | 0.009564 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0006820 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0035520 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0035790 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0035740 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0035320 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G036000 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0035740 | RBH | 0.0 | 0.0 | 0.0 |
