Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_02g0029500 | OGI:02079800 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr02:30184953-30198098 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | acacgactcaccaaaacattttatacagcgcgtagcatgcatgtacagatgtacctatatgtggtcttacctctcttggataccatggagtcaagacttcaggattacacaaacaaaataatttttcctccagtgaaattagaatatcgaatttcacgagggatttaaccgcgaatgtcatttctaaactcttgattttgatgaccaagtggggacaaccaccacgaaggtaaacatctgaaaaaaattcagtgccaaacaggcaactggtagccaaaaaggctggattgaacgggccaatgagcaacacacgagaaataatgatttgggtggtgccgagggccttcctcttttcccttctctgttggcatctgctaaacaaaatttccaagttacaaagtcttccctcaacataaatgagggaatacaattctacatctaaagagcctacgctaccaatatacatacatgtatagaaagtacccaatgcctccattagtgctaaccaaaccctccaagcttgtaaggtcaatgtgaccacatcaagcaaatagcttcgctcccaccaatcgccatcaagcttgcatcaattctgtgtggcgagcgactcaatctgtgtatccttgggctcctaccgttgacaatctaatgtcctctttaaaagaaagggcatgacatccagagcaatatgttcatttgttctcatccgatgtctgtgaaatctgtaagaggatccaactcctcaatgccagaaaggacatcagagtcatactggtacggaacaaactctgtttcagcctcttgaggaagattatcaaagtaggtgaattcagaatcactgatgccaaggtcagatagggactgggtaatgtggaactctgctgagttatgcagaagttgccccggaatcctatgaaaattatttgtaaccggcacttcctgtggttcagtggtcctttgaattttggatttgggaggccttccagattctgatgatgctttgtgctttcctatggacttaggaccagatttatgccgaccggcatcgtatgtgtggaaagcagatgaggcccagtgagaaccttccccttcaaaacaagtttctgataccatcctgtgtaaatgaatgcaatgacacgttaggaagatcagaagcaaaaataaataaataaaaaatgcaaagcagaactgtatcatcatgaagaggatttttccggtgctaataaccactagctccaataaatacacaaaatatctgtgtcaacaattacctgaatctgttctcagcatgtctataagaaagtgtggacagtagtgagtgctccactggctccacagcatgttttaatggttccggttctagtatggacacgttaacaacagatggaaagtccgcctcataatcatctcgatctgtcaagaaatccaattccaattccaaaaagttacggcgggactcatgattgcttgttggaactaccattcttggacattgaacctgagcatctgcgagggctgtccttactagattaaagtttggtctgaagtttgtcatggaccagttctcgctgagtctgccaggtttctggagtgtgttagagtaactcataacacagtgggactcacgggcagacttcgatctccaaacagatgaaagaacagccatgaaatgtttctggagaagcaattcattgttaggaagctcgctgattacattgagcaacatctgagtttgatcctggaaaataagtcatagaaaatcaagttgtgcacacaataagttgaatataaatagtagatttgtttaaagcacacatatacaaaaaaaacgggcacagtatagatatattcacatgcctggcctcttaactggattaaagcacaagattgcagattgcaacttggcaattggcagaggtatgacttgcttattagtcagatagaggaccaaccccagcacgacaaccatttaacacttgtaaccactgtcaaagatattcaatgacttgagcttctaaaaacggccctccaggaattaagaatatggtattttactcaaaatccccttaatttagcatttttatgtgttgtctagtctgtcggactttccgaatttgagtcatttcagacatattgatcatgtggcatgtttcgaatttgagtcatttcagacttattttagtgagtgagaaatgagaacagcgagaaccatggtaaaaatgtaaaatttgtaaaaatttaaagttgtcagcatattgagaactagcccactaactactcccttcgtccctaaataagtgtagttttagctagtcaaagacatattaaggggtcaaaagactactaagcccttcattaatatggagagagtgagtaggatgagggagtactattggttcgatgactaaaaatgagaagaaaaggatgtaggtggtattaaaaaggtctaatgctagtggaccactctaaaactacactcttttagggacgaattcttatgctaaaaactagacttatttagggatggagggagtagatgacatgagtaaactgacctcagatactttcaagatagccttcccagtcccagaaggaaccttctcactgtttgaattgtctgttgctgataagatgtgcttgcagactaattcccggaatctctcacagcaatgcacagggtgacggtatcttcctctataaaatgcaccacctggtacagaatgaagagaatcactagccagttcccaaagagggccgtactcatttacagttgcacaaagaacagcatcttcctcagttgtccacgagtctgaagcacaatcgcgagaccataggctcttcttcttcaatctctcaggcttgattaccatgacacgctttactggcatgcatgggacagaaattcggccatcactcttaattcttgcccccgatttgggatcagaatcattaagttcatctttcaacttaagctgcttgccttcaagaaaatgcttaggtgataaggcctcggaactgaaactcgatttaggggctttcttgagcttcttcaggcttctgctattgctgttctcttcctcattggttgacattatcctcttatgcttgttagaatgatggtgtgctgattcatcgctcattagctctggtgagggtgcattgtcatcaatgctcatagtatctactgatgtttcctcaaccataacctctgactcagatgataaacgtcctttcttcaaagatttgaacttcgctgccttcttcttgttcttttttgacttttttcgttgagtgctgtcaaagattgacaaaagttattcttttaggatacagtaaatagatgaaagcatatggacacatctaaaaccaattggaaagaaaatgcaggcataccatgtaaccctacagatgagcaccaaagtgaagtgcaaaacagcacaaaagctccctctgttttcatgactgtcaacattgactactactgtttctactttgacctttttttttgcgaggaactattaatggtcaaaattattaaaatgattaatagtttaggattaaagtttcttgttgaagtttaggattaaagaattaatggtgaattgaactttcttgtttatgcttacgatacagtacactttaataacatgacatcttttcatttgtaaaattattgaaaaaagatgagtgatcacagtgtgaaaatgaatagtgcccactgttagataataaaaaagcagagggagtatatacatctacccactaaggccccattctaatgtgcttctagggggagctactccctcgtttatcatgagcacgcttcccgaactgctaaacggtgtgtttttgcaaaaactttctatatcaaagtttcttaaaaaacaaataaatctatttttaagtttatggtagttaatactcaattaatcataccctaatcatctgcatcattttgcgtggagctaataagctcaggttatccccactatcgaacagggcctaagagccaaaaacaatgaacaccaaagtgagagcacaatttctcagtctatacctattatcattcttttcctccaactcttttgctgcttcacgggcttgtctttcttgttcctccaacaactgtgggtatcacatcaggtgacataattagccactagccccaagaggaaaacacaagaatagaagtatgaactgacctgtttttgagctagagcctcaacatgttgccgatatgctgtagtagcaaaatcaacatcccatgctgcagttaagatgatgtgtcaacacaacaaagcataatacaaggaagggttagtatagcagagacaactacctaaaactaagttgcataaatcaaatatgagatgaaacttttttcgtaagtgctatgggctgttgggtcaacataaacataaaaacacttacactcataagaaagtggttcctggtcttcatcaatttctgcttctaaatcttctttgagtttttcaatgcgttcaagttcccattcttcctcttcaacattgacctgatagtttatagcagctttatcaattattggatcccagagttccaaaaaccgcatggcatatctatcaattggccggagctgattttcaaaagacgaacttgcttgacctgctgcagcagctgcagcagccatctgcttaacatcagcaagcatgtcaatatctccatctcctccagccaaagttatagccttttcttcatctaattgatttatagataaagcaacatgcttgtccttgaccaaatcagaacactgatatttatgctcttcattggtgtgttcatcaggtttagtgtcatcctcgtttacaagatcatcctcctcaagtcttccagcagcctcctcgctgaactcttgattgtccacggcctcttcctgctccagcctcttgagagccatatagtcagcttcatcttctgcctgtctaatagctgcttcaacatcaacatttgacagcgccagattagttccgtttgagggtccagcagacagaaagcaatccttctgctgattctctgcatgaagtgatgagtgcccagaaaagaattccataggatcaagcttcttgaagaactctgtattgtagctaccacgttgtatcactagatcatcaagagctcgcttctgattggctttcttgagtatattctcctctatagtgctctcactgatcagtctatagatgtgaacttcacgagtttgacctatcctgtggcatctgtcttgggcctgttggtccattgcaggattccagtcactatcatagaaaatgacagtgtctgcacctactaggttgattcccacaccaccacttcgagtggataagataaaaagaaaaaactttgggttagtattaaacctctgcatcagtgtctgcctctcttctggctgggttgatccatctaaccgcaaatacgtatacccatatagattaatgaactcctccagtatatcaagcatcttagtcatctgagtaaatatcaaggccctgtgtccttctgacttcaaacgcctcaacaaaatagcaagttcctgcaactttccacagtcaaactggatcaaacgcctgtcaggaaagtacacttgacggcgaacaatcgcaggccttataggagagaaaacaggagaaaactcattcatgcatttctctctgtatgctggttcaataagaacaggagatttccctttgttgcaccagaataatggtgcaggcgctcgtgcagcaggaattgcaaaagtaaatgactcaataaaatcaagcattgtcttgaagcgatccaccgatgatagaacaagatttgctaggcttgatgaaaattccatgtggcataaagggttcttcttcttctcgagaatatcagacacaggatgctttatggtcaaaacctcccgaatatttgtgccataaacaggcctcttctggcatcttaccctattccaccatgcaatggaagctgctctttcattagcttcttttattctctcctcccacaaagaattgtgaatctcttcaaaaatatttgtcccattgcttctctgaccatcattagtagagcgagaaatgccagaacccctgagggttatgcttggagaaaaaatggcagcaacctcatcttcctcccaagaagtcatattatattcattttgagtaaatacaaaattcatatctgacaggtcaacctgagaaaatgggcctttatcaaggaccatgccaacagaagagctgatttgcatgttgatccctgccatgtcaaaagagctgataattggacggccttcaaaaagatctggatggttacaaacctttctaagctgcataatgatgctaatcatgccaaaataatttccacttgccaatgttgcctgtgtctctgagcttgcaatgaaatcttcatacaagttcctttgccttctggaaagtcggcaatatatgacatgctcatgcttctgtggcaactgtttctccacatcccgtttcaatcgacgaagtataaacggacgaaggacgttgtgcaaccgatctatcacttctttgtttaccttgtcttggccctctaccatgcctgaaattggattgcagaaccagtccttgaactcttgatgtgactgaaatacatgaggcatcaaaaagtgcatgagagaccaaagttccatgaggtcattttgtagaggagttccagttaaaagaatgcgtcgcttcgaattaaaatttagtaaagtctgccatctttgtgatttccagttctttatcaaatgagcctcatcaagaataagatacttccatttttttcgcttaaacactttggagtcctgaataacaagcctgtatgtagtgatgcatacatggaagtaatttggtttcatccaaccctgacgtttctgttttctctcttttgcacttccaaaatatgtcagtattttaaacgcaggacaccatttgagaaattcagtctcccaatttagcataacactagttggcactacaataagatgtggaccccatattcccttctcacatgcaaggtgtgctagcaaggagatggtcataatcgtcttccccaaacccatttcatctgctagaattccattcagcctcttttcatacatagcaacaagccagtccagtccaatgtgctgatattctcgtagagaatgcttaagaaggaaagggaattttgtccgcacatttgttgttgagaacgtgttaccagtcggttgtgctgatcttgcagcagctgcagcatcagcaatcacatcactattatctccattggccatcgctttagtatcagttacatcaccctctttagcagtattttcctgtacaataggctctgatgtttctagttgtagaacactaccactgacatgctcaggtcccagcatgcctgcagattcatgatcttcaaatgtgtcattgttgccctccacaatctctgcagactggtcattattcacttttacggtctctgcagactgatctctggtcagtttcatggtatctgcagaaagatccctgtttacctccacggtgtctgcagactcatcatccacaggcatgttggcattgacatcctcaactgatagtgcaggtgaattttccaattctgttgtgtcatcatctgcatagccatcctaaacataaaaaaggcattacaaatggaccacagtaaagcataactgaagaaagaaatagaaattcagcagataccttttggtatcttgcaagaagttcttcaagtgggatctcactctctttctgcagtaacttaacctacagattaaaaaataataataccaatgatccagaactgtcacaagaaatatgtattgcacaagggtgcctctagtacaccatagtagtatgtcttttgtatcagtcctagtttagacaagaaaatagttttgcatcaatctaggccaaattaggttgtatacactcgaatattcaactggatattttgaatgtgttgccatcctagagcaagtttattgtatcacaaaaagtggtatagtttaaatcggaatccacaaaattactatctagttgttataccaagatatttcgtattaaaatattaaccttaagtagttgtgatagcacagataataaatcgattgtattttattgacaagtttattctactggcaacaaatcaggaattagagtggctaaacttcacagtgtgaaattttgaataataatgatgttcaatgcttatattcacctcatctagaggatcacagtcttctttcttcgccaactcttcctcttcagacaaagtagcttcatcatcctgtcaaaaaagatgagtttatagctgtataagaaaaaaccgcaaaaagagtgagatagactaaatcgatgcaaatgataactaatccatgaatggatgtttctagttttgaaggaccgccacacagtcataggatgcagaatatatgggaaatatgaaggcagtgggaaaaacagatgaagatgttcatggtacctttccttcatcattagcaacataatcttcgtcgtcctgaaaatggtaggtacataacagttgtctacattagagtgttaccacatgttgctcagataacaaataggaggggagaaaagcttttttacttggcagtcagaatccaaagaaaactataacaggaatcacaggaatttgtttgaaaattctaatccacgtcaactttaacaaacttcatttccctaaaaagctttgtacttgacaaaaattgccagtttggctaattcacccccatataactatatttccatccattttattgggtaatgtagtctcacaagaaatcaagtcataatgcaacgtccccccactctgcattttccttttctcttgaagctacaggagagactagagaagttaaaatattccatttaataggggtagcaaggtccaatcctatttattaacttatttgcaaacattagttggagtatgcaacaaaactaagggatcggcagtaagttgccaataaaatcctttcttccccaccccaataccattcagaaaacttggtccaacaacaattgtctgttcgtactttccaatatttgaaagatttcattatcttgttactaggcagtggacagctggtagcggtgggcataaaaaccaaggacggaagaccggacccaaaaaaacgaacccaaaaagaccgaaagctcggtcattggtcactaattcgggtgtacaaccagaaagaccgaacttaattcggtgagttcggtcgttactttggattaaccgaaagaaccgatggaccgaagcagccaactacctccctgtatccctcctgtacaaggcccacaagtccacaagctcattcgcatgaacacatcagccacaaccttatccctttcgtccatcacgcaaaggcaaacccatctgcgccagccttctaaattcgcaacgccacccatgctaagcctccgagcccccggctgatcgttgcaacgccgcccgcgcctagcctccgcaccgctcgacgctcagctgctcgttgcgccgccgcccgcgcgcagcctctccgtggcccctgctgctcattgcaccatggccagcacccaaactccgcaccacccaggtcccgactgattgtcgcaccaccacctacggcctgcatccaccctacctccgcgccaccgcttgggcctagctctcccagagtccatgtaccttcggtcatttcggtggagaccaaggatcggaccaatagttcagttaactaaatcatcattaacgatttcttgttcgctacttctgttttctatttgtaaaaaacgatcttcagaaaaactgaactacccggaccgaattttcggtctagacagaatgcccacccctaacagctggtctttctaagagatatgagtgaaatagaccaaatggtattggaacggagaagacaaaatccaaaacaaatacaatgataataaaaatgttcccctccaaaaataatgataacaaaaatgtacctttgcatcaacagatgagatattgccattgcatttcacctgaaaagtcaagaaagtttgatggcacgttcagagaacattcaaaagctcgaaatcctgagtcccctgtctttactatatactacataagcataagccaaatgacacaaagaaatcaagcatacagtgttctttttcacaaactcagagtaagactggtaatcatctgcttcctcagaagaaatgccttcatcacttgaagtatgatcagattcatcgttgcatccattagcctggttcaaaggatctggaagaaaccatacacaacacaaatcaaatgaaaggccacaatgtgtcaagtatttcagattccaaataccataaaggtgtctgaaactctgaatatataacctttaatcaaatcctttgaatctgagtcactaaaaacgtctctgccatctggactgctttccctgctaactgagaaagcttgaactgatcaaattatcaattgagagcaaagtggaacacagaattgattcctaaaatatgtgaaacatggcaaaagagaactgtttttcggagatcacctttatttttagtgtacaacttgagaatatcatccagtggtagatcagcttctgcctgcaaagcagccaattcctcgttgcgctcagcctccgtaatttgagcttcatcctcatcgattgtgtgttcatcatcttcctgcagcacaaacacacacaagagtaattcaatgtcctgagaaatgaaaaacaaaccaaaaaggaaaaggaaaggtgtccttattatcttttttggacaggaaaatatgtattccttgccctggtacacaacttacaaaaaaagtaataatggttggtgccagtaccagtatctgtagaaatctaacaagttttaatgctacccacgaaaaataaaaaaagaatcaaaaaaatcacaatagtagcttactggctcttcacccaaggaactgttgtaatcatcatcgatttccacattatctgtaaaagcatactgttaaaagctaaagaaaaaggacatttaaaatttcagagatatccagaacatttcataaagctacacaccaacatcagtaggacttgatgcatttatgttctcttgtgctagttcctgctgggatctttgattagtctgtaaagagtcattttcttgattttgaaggcgcacatcaacaagattttctgccagcattgttgaatatctagaaaaagtttgcacaaaacaacagagagtgagcatgcagcgatgaacttactaaaaagtaagatagttccaaaacaaaaccaactgataatagatggtagtacctttcagtctgtcctaagaggaaatcaagttgcttgtctagggccttttttttcctttcctcaagctccagttggttcttataaaaaacctgcatcaaacccaaatataaatagcataaggtttagtatattggaaaatgtggtgttctaaatatacactgagccacaatgaacttgccagcttctctattttggtccagaacttcttcacgtccttagaaatatttagggcaacttttctcaggcgaacttcttcctcctatgaaaatcgcagccaacattaagataaaacccatgaatactgatttgctatccacataatctacggtcattgagtatgtcgctcaatgtgctggttatatatttacttgcagttgaaagaacaaattaggggaaggaacactgcttggttctcaacttatcttcatcaaagttcaattcaatgtgctgttataaataatgtcttatgtactaatgaaatatatttcctagactgaccatagtttatgccaaaacatgcagtacttgtgaatttaacctattctaggctttatttgtcaacctgatcttattgatcaaagtctccaccaaatttaggtttagcaagcagttaagcaatcagttagctatggttcttcattctttattctcggcaggttaaagtcagatcatggtaataaataaagggtactcagttaaggtccctgtgtactgcagtgaggataaactaagatgcacatcactcagttcagcaaacggcaagcatgcagatgtggccatgtgggtcattgccagcaataaattacagtccagcttccttgtcgccttcccagcctccaacctttcccattactacagtttattattctatgtatataaatgataaaggtgctgatagccttcaatatgggacagaattgtaataagacaactctcatggagtcatgttaatctgcctaattaataaaaaaaagacaagcaaaccttctgttttctctcgtcctttgttgcttggtcaactacacccttattagctctttgagcaatccttttagccatggacagcttccattttctctcagcatcaaactcctgcacaacatttaatattaaccaagccaagggaataggattagtatatcttcattataaaaccatgcaaattcactcagtgaaagaaggatcatgatctgtcaaatgtactaatagcaagtaacctttgccagccaagccatttctccaagaagatggtcccagtgagttttcgtccttcgaggctccccccttggggcttcaagagcctgcacaagataggacaaaacttttcagtcagtgcaatacaaagaaagtgaaaatggatttacatatatacaaaagaacatgacttaattttccttctctaactaggcctgacaaaatcaaaaacagtattatgcaagcgtggaatagaaagaaaaatgtgtgtgaagataagagaaatagtataacaatgatttgcagctactaaacataaataccaatgctaaaagctaaccttctggcgtctggctcttgtctcatgatctaactttgatcgaggaccttttgatgccatctttccaatattttgtagagaactatctcatgtcttggggcatattcagaaaaatcgtatacaaactgtaaaatacatttagtgcatgagataaaaggtctaaacttttttccaaaaaaaaaagtattacagaaagaagagaaataaaacagtgaaactaggtcattaagtcatccgtgaa
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| CDS seq | atggcatcaaaaggtcctcgatcaaagttagatcatgagacaagagccagacgccagaaggctcttgaagccccaaggggggagcctcgaaggacgaaaactcactgggaccatcttcttggagaaatggcttggctggcaaaggagtttgatgctgagagaaaatggaagctgtccatggctaaaaggattgctcaaagagctaataagggtgtagttgaccaagcaacaaaggacgagagaaaacagaaggaggaagaagttcgcctgagaaaagttgccctaaatatttctaaggacgtgaagaagttctggaccaaaatagagaagctggttttttataagaaccaactggagcttgaggaaaggaaaaaaaaggccctagacaagcaacttgatttcctcttaggacagactgaaagatattcaacaatgctggcagaaaatcttgttgatgtgcgccttcaaaatcaagaaaatgactctttacagactaatcaaagatcccagcaggaactagcacaagagaacataaatgcatcaagtcctactgatgttgataatgtggaaatcgatgatgattacaacagttccttgggtgaagagccagaagatgatgaacacacaatcgatgaggatgaagctcaaattacggaggctgagcgcaacgaggaattggctgctttgcaggcagaagctgatctaccactggatgatattctcaagttgtacactaaaaataaagttcaagctttctcagttagcagggaaagcagtccagatggcagagacgtttttagtgactcagattcaaaggatttgattaaagatcctttgaaccaggctaatggatgcaacgatgaatctgatcatacttcaagtgatgaaggcatttcttctgaggaagcagatgattaccagtcttactctgagtttgtgaaaaagaacactgtgaaatgcaatggcaatatctcatctgttgatgcaaaggacgacgaagattatgttgctaatgatgaaggaaaggatgatgaagctactttgtctgaagaggaagagttggcgaagaaagaagactgtgatcctctagatgaggttaagttactgcagaaagagagtgagatcccacttgaagaacttcttgcaagataccaaaaggatggctatgcagatgatgacacaacagaattggaaaattcacctgcactatcagttgaggatgtcaatgccaacatgcctgtggatgatgagtctgcagacaccgtggaggtaaacagggatctttctgcagataccatgaaactgaccagagatcagtctgcagagaccgtaaaagtgaataatgaccagtctgcagagattgtggagggcaacaatgacacatttgaagatcatgaatctgcaggcatgctgggacctgagcatgtcagtggtagtgttctacaactagaaacatcagagcctattgtacaggaaaatactgctaaagagggtgatgtaactgatactaaagcgatggccaatggagataatagtgatgtgattgctgatgctgcagctgctgcaagatcagcacaaccgactggtaacacgttctcaacaacaaatgtgcggacaaaattccctttccttcttaagcattctctacgagaatatcagcacattggactggactggcttgttgctatgtatgaaaagaggctgaatggaattctagcagatgaaatgggtttggggaagacgattatgaccatctccttgctagcacaccttgcatgtgagaagggaatatggggtccacatcttattgtagtgccaactagtgttatgctaaattgggagactgaatttctcaaatggtgtcctgcgtttaaaatactgacatattttggaagtgcaaaagagagaaaacagaaacgtcagggttggatgaaaccaaattacttccatgtatgcatcactacatacaggcttgttattcaggactccaaagtgtttaagcgaaaaaaatggaagtatcttattcttgatgaggctcatttgataaagaactggaaatcacaaagatggcagactttactaaattttaattcgaagcgacgcattcttttaactggaactcctctacaaaatgacctcatggaactttggtctctcatgcactttttgatgcctcatgtatttcagtcacatcaagagttcaaggactggttctgcaatccaatttcaggcatggtagagggccaagacaaggtaaacaaagaagtgatagatcggttgcacaacgtccttcgtccgtttatacttcgtcgattgaaacgggatgtggagaaacagttgccacagaagcatgagcatgtcatatattgccgactttccagaaggcaaaggaacttgtatgaagatttcattgcaagctcagagacacaggcaacattggcaagtggaaattattttggcatgattagcatcattatgcagcttagaaaggtttgtaaccatccagatctttttgaaggccgtccaattatcagctcttttgacatggcagggatcaacatgcaaatcagctcttctgttggcatggtccttgataaaggcccattttctcaggttgacctgtcagatatgaattttgtatttactcaaaatgaatataatatgacttcttgggaggaagatgaggttgctgccattttttctccaagcataaccctcaggggttctggcatttctcgctctactaatgatggtcagagaagcaatgggacaaatatttttgaagagattcacaattctttgtgggaggagagaataaaagaagctaatgaaagagcagcttccattgcatggtggaatagggtaagatgccagaagaggcctgtttatggcacaaatattcgggaggttttgaccataaagcatcctgtgtctgatattctcgagaagaagaagaaccctttatgccacatggaattttcatcaagcctagcaaatcttgttctatcatcggtggatcgcttcaagacaatgcttgattttattgagtcatttacttttgcaattcctgctgcacgagcgcctgcaccattattctggtgcaacaaagggaaatctcctgttcttattgaaccagcatacagagagaaatgcatgaatgagttttctcctgttttctctcctataaggcctgcgattgttcgccgtcaagtgtactttcctgacaggcgtttgatccagtttgactgtggaaagttgcaggaacttgctattttgttgaggcgtttgaagtcagaaggacacagggccttgatatttactcagatgactaagatgcttgatatactggaggagttcattaatctatatgggtatacgtatttgcggttagatggatcaacccagccagaagagaggcagacactgatgcagaggtttaatactaacccaaagttttttctttttatcttatccactcgaagtggtggtgtgggaatcaacctagtaggtgcagacactgtcattttctatgatagtgactggaatcctgcaatggaccaacaggcccaagacagatgccacaggataggtcaaactcgtgaagttcacatctatagactgatcagtgagagcactatagaggagaatatactcaagaaagccaatcagaagcgagctcttgatgatctagtgatacaacgtggtagctacaatacagagttcttcaagaagcttgatcctatggaattcttttctgggcactcatcacttcatgcagagaatcagcagaaggattgctttctgtctgctggaccctcaaacggaactaatctggcgctgtcaaatgttgatgttgaagcagctattagacaggcagaagatgaagctgactatatggctctcaagaggctggagcaggaagaggccgtggacaatcaagagttcagcgaggaggctgctggaagacttgaggaggatgatcttgtaaacgaggatgacactaaacctgatgaacacaccaatgaagagcataaatatcagtgttctgatttggtcaaggacaagcatgttgctttatctataaatcaattagatgaagaaaaggctataactttggctggaggagatggagatattgacatgcttgctgatgttaagcagatggctgctgcagctgctgcagcaggtcaagcaagttcgtcttttgaaaatcagctccggccaattgatagatatgccatgcggtttttggaactctgggatccaataattgataaagctgctataaactatcaggtcaatgttgaagaggaagaatgggaacttgaacgcattgaaaaactcaaagaagatttagaagcagaaattgatgaagaccaggaaccactttcttatgagtcatgggatgttgattttgctactacagcatatcggcaacatgttgaggctctagctcaaaaacagttgttggaggaacaagaaagacaagcccgtgaagcagcaaaagagttggaggaaaagaatgataatagcactcaacgaaaaaagtcaaaaaagaacaagaagaaggcagcgaagttcaaatctttgaagaaaggacgtttatcatctgagtcagaggttatggttgaggaaacatcagtagatactatgagcattgatgacaatgcaccctcaccagagctaatgagcgatgaatcagcacaccatcattctaacaagcataagaggataatgtcaaccaatgaggaagagaacagcaatagcagaagcctgaagaagctcaagaaagcccctaaatcgagtttcagttccgaggccttatcacctaagcattttcttgaaggcaagcagcttaagttgaaagatgaacttaatgattctgatcccaaatcgggggcaagaattaagagtgatggccgaatttctgtcccatgcatgccagtaaagcgtgtcatggtaatcaagcctgagagattgaagaagaagagcctatggtctcgcgattgtgcttcagactcgtggacaactgaggaagatgctgttctttgtgcaactgtaaatgagtacggccctctttgggaactggctagtgattctcttcattctgtaccaggtggtgcattttatagaggaagataccgtcaccctgtgcattgctgtgagagattccgggaattagtctgcaagcacatcttatcagcaacagacaattcaaacagtgagaaggatcaaactcagatgttgctcaatgtaatcagcgagcttcctaacaatgaattgcttctccagaaacatttcatggctgttctttcatctgtttggagatcgaagtctgcccgtgagtcccactgtgttatgagttactctaacacactccagaaacctggcagactcagcgagaactggtccatgacaaacttcagaccaaactttaatctagtaaggacagccctcgcagatgctcaggttcaatgtccaagaatggtagttccaacaagcaatcatgagtcccgccgtaactttttggaattggaattggatttcttgacagatcgagatgattatgaggcggactttccatctgttgttaacgtgtccatactagaaccggaaccattaaaacatgctgtggagccagtggagcactcactactgtccacactttcttatagacatgctgagaacagattcaggatggtatcagaaacttgttttgaaggggaaggttctcactgggcctcatctgctttccacacatacgatgccggtcggcataaatctggtcctaagtccataggaaagcacaaagcatcatcagaatctggaaggcctcccaaatccaaaattcaaaggaccactgaaccacaggaagtgccggttacaaataattttcataggattccggggcaacttctgcataactcagcagagttccacattacccagtccctatctgaccttggcatcagtgattctgaattcacctactttgataatcttcctcaagaggctgaaacagagtttgttccgtaccagtatgactctgatgtcctttctggcattgaggagttggatcctcttacagatttcacagacatcggatga
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| Protein seq | MASKGPRSKLDHETRARRQKALEAPRGEPRRTKTHWDHLLGEMAWLAKEFDAERKWKLSMAKRIAQRANKGVVDQATKDERKQKEEEVRLRKVALNISKDVKKFWTKIEKLVFYKNQLELEERKKKALDKQLDFLLGQTERYSTMLAENLVDVRLQNQENDSLQTNQRSQQELAQENINASSPTDVDNVEIDDDYNSSLGEEPEDDEHTIDEDEAQITEAERNEELAALQAEADLPLDDILKLYTKNKVQAFSVSRESSPDGRDVFSDSDSKDLIKDPLNQANGCNDESDHTSSDEGISSEEADDYQSYSEFVKKNTVKCNGNISSVDAKDDEDYVANDEGKDDEATLSEEEELAKKEDCDPLDEVKLLQKESEIPLEELLARYQKDGYADDDTTELENSPALSVEDVNANMPVDDESADTVEVNRDLSADTMKLTRDQSAETVKVNNDQSAEIVEGNNDTFEDHESAGMLGPEHVSGSVLQLETSEPIVQENTAKEGDVTDTKAMANGDNSDVIADAAAAARSAQPTGNTFSTTNVRTKFPFLLKHSLREYQHIGLDWLVAMYEKRLNGILADEMGLGKTIMTISLLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKQKRQGWMKPNYFHVCITTYRLVIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFCNPISGMVEGQDKVNKEVIDRLHNVLRPFILRRLKRDVEKQLPQKHEHVIYCRLSRRQRNLYEDFIASSETQATLASGNYFGMISIIMQLRKVCNHPDLFEGRPIISSFDMAGINMQISSSVGMVLDKGPFSQVDLSDMNFVFTQNEYNMTSWEEDEVAAIFSPSITLRGSGISRSTNDGQRSNGTNIFEEIHNSLWEERIKEANERAASIAWWNRVRCQKRPVYGTNIREVLTIKHPVSDILEKKKNPLCHMEFSSSLANLVLSSVDRFKTMLDFIESFTFAIPAARAPAPLFWCNKGKSPVLIEPAYREKCMNEFSPVFSPIRPAIVRRQVYFPDRRLIQFDCGKLQELAILLRRLKSEGHRALIFTQMTKMLDILEEFINLYGYTYLRLDGSTQPEERQTLMQRFNTNPKFFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQRGSYNTEFFKKLDPMEFFSGHSSLHAENQQKDCFLSAGPSNGTNLALSNVDVEAAIRQAEDEADYMALKRLEQEEAVDNQEFSEEAAGRLEEDDLVNEDDTKPDEHTNEEHKYQCSDLVKDKHVALSINQLDEEKAITLAGGDGDIDMLADVKQMAAAAAAAGQASSSFENQLRPIDRYAMRFLELWDPIIDKAAINYQVNVEEEEWELERIEKLKEDLEAEIDEDQEPLSYESWDVDFATTAYRQHVEALAQKQLLEEQERQAREAAKELEEKNDNSTQRKKSKKNKKKAAKFKSLKKGRLSSESEVMVEETSVDTMSIDDNAPSPELMSDESAHHHSNKHKRIMSTNEEENSNSRSLKKLKKAPKSSFSSEALSPKHFLEGKQLKLKDELNDSDPKSGARIKSDGRISVPCMPVKRVMVIKPERLKKKSLWSRDCASDSWTTEEDAVLCATVNEYGPLWELASDSLHSVPGGAFYRGRYRHPVHCCERFRELVCKHILSATDNSNSEKDQTQMLLNVISELPNNELLLQKHFMAVLSSVWRSKSARESHCVMSYSNTLQKPGRLSENWSMTNFRPNFNLVRTALADAQVQCPRMVVPTSNHESRRNFLELELDFLTDRDDYEADFPSVVNVSILEPEPLKHAVEPVEHSLLSTLSYRHAENRFRMVSETCFEGEGSHWASSAFHTYDAGRHKSGPKSIGKHKASSESGRPPKSKIQRTTEPQEVPVTNNFHRIPGQLLHNSAEFHITQSLSDLGISDSEFTYFDNLPQEAETEFVPYQYDSDVLSGIEELDPLTDFTDIG |
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| Function | Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 [UniProtKB/Swiss-Prot:Q7X9V2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_02g0029500 | OsLima_02g0029500.01 | Chr02 | 30184953 | 30198098 | - | NAM | ||
| CDS seq | atggcatcaaaaggtcctcgatcaaagttagatcatgagacaagagccagacgccagaaggctcttgaagccccaaggggggagcctcgaaggacgaaaactcactgggaccatcttcttggagaaatggcttggctggcaaaggagtttgatgctgagagaaaatggaagctgtccatggctaaaaggattgctcaaagagctaataagggtgtagttgaccaagcaacaaaggacgagagaaaacagaaggaggaagaagttcgcctgagaaaagttgccctaaatatttctaaggacgtgaagaagttctggaccaaaatagagaagctggttttttataagaaccaactggagcttgaggaaaggaaaaaaaaggccctagacaagcaacttgatttcctcttaggacagactgaaagatattcaacaatgctggcagaaaatcttgttgatgtgcgccttcaaaatcaagaaaatgactctttacagactaatcaaagatcccagcaggaactagcacaagagaacataaatgcatcaagtcctactgatgttgataatgtggaaatcgatgatgattacaacagttccttgggtgaagagccagaagatgatgaacacacaatcgatgaggatgaagctcaaattacggaggctgagcgcaacgaggaattggctgctttgcaggcagaagctgatctaccactggatgatattctcaagttgtacactaaaaataaagttcaagctttctcagttagcagggaaagcagtccagatggcagagacgtttttagtgactcagattcaaaggatttgattaaagatcctttgaaccaggctaatggatgcaacgatgaatctgatcatacttcaagtgatgaaggcatttcttctgaggaagcagatgattaccagtcttactctgagtttgtgaaaaagaacactgtgaaatgcaatggcaatatctcatctgttgatgcaaaggacgacgaagattatgttgctaatgatgaaggaaaggatgatgaagctactttgtctgaagaggaagagttggcgaagaaagaagactgtgatcctctagatgaggttaagttactgcagaaagagagtgagatcccacttgaagaacttcttgcaagataccaaaaggatggctatgcagatgatgacacaacagaattggaaaattcacctgcactatcagttgaggatgtcaatgccaacatgcctgtggatgatgagtctgcagacaccgtggaggtaaacagggatctttctgcagataccatgaaactgaccagagatcagtctgcagagaccgtaaaagtgaataatgaccagtctgcagagattgtggagggcaacaatgacacatttgaagatcatgaatctgcaggcatgctgggacctgagcatgtcagtggtagtgttctacaactagaaacatcagagcctattgtacaggaaaatactgctaaagagggtgatgtaactgatactaaagcgatggccaatggagataatagtgatgtgattgctgatgctgcagctgctgcaagatcagcacaaccgactggtaacacgttctcaacaacaaatgtgcggacaaaattccctttccttcttaagcattctctacgagaatatcagcacattggactggactggcttgttgctatgtatgaaaagaggctgaatggaattctagcagatgaaatgggtttggggaagacgattatgaccatctccttgctagcacaccttgcatgtgagaagggaatatggggtccacatcttattgtagtgccaactagtgttatgctaaattgggagactgaatttctcaaatggtgtcctgcgtttaaaatactgacatattttggaagtgcaaaagagagaaaacagaaacgtcagggttggatgaaaccaaattacttccatgtatgcatcactacatacaggcttgttattcaggactccaaagtgtttaagcgaaaaaaatggaagtatcttattcttgatgaggctcatttgataaagaactggaaatcacaaagatggcagactttactaaattttaattcgaagcgacgcattcttttaactggaactcctctacaaaatgacctcatggaactttggtctctcatgcactttttgatgcctcatgtatttcagtcacatcaagagttcaaggactggttctgcaatccaatttcaggcatggtagagggccaagacaaggtaaacaaagaagtgatagatcggttgcacaacgtccttcgtccgtttatacttcgtcgattgaaacgggatgtggagaaacagttgccacagaagcatgagcatgtcatatattgccgactttccagaaggcaaaggaacttgtatgaagatttcattgcaagctcagagacacaggcaacattggcaagtggaaattattttggcatgattagcatcattatgcagcttagaaaggtttgtaaccatccagatctttttgaaggccgtccaattatcagctcttttgacatggcagggatcaacatgcaaatcagctcttctgttggcatggtccttgataaaggcccattttctcaggttgacctgtcagatatgaattttgtatttactcaaaatgaatataatatgacttcttgggaggaagatgaggttgctgccattttttctccaagcataaccctcaggggttctggcatttctcgctctactaatgatggtcagagaagcaatgggacaaatatttttgaagagattcacaattctttgtgggaggagagaataaaagaagctaatgaaagagcagcttccattgcatggtggaatagggtaagatgccagaagaggcctgtttatggcacaaatattcgggaggttttgaccataaagcatcctgtgtctgatattctcgagaagaagaagaaccctttatgccacatggaattttcatcaagcctagcaaatcttgttctatcatcggtggatcgcttcaagacaatgcttgattttattgagtcatttacttttgcaattcctgctgcacgagcgcctgcaccattattctggtgcaacaaagggaaatctcctgttcttattgaaccagcatacagagagaaatgcatgaatgagttttctcctgttttctctcctataaggcctgcgattgttcgccgtcaagtgtactttcctgacaggcgtttgatccagtttgactgtggaaagttgcaggaacttgctattttgttgaggcgtttgaagtcagaaggacacagggccttgatatttactcagatgactaagatgcttgatatactggaggagttcattaatctatatgggtatacgtatttgcggttagatggatcaacccagccagaagagaggcagacactgatgcagaggtttaatactaacccaaagttttttctttttatcttatccactcgaagtggtggtgtgggaatcaacctagtaggtgcagacactgtcattttctatgatagtgactggaatcctgcaatggaccaacaggcccaagacagatgccacaggataggtcaaactcgtgaagttcacatctatagactgatcagtgagagcactatagaggagaatatactcaagaaagccaatcagaagcgagctcttgatgatctagtgatacaacgtggtagctacaatacagagttcttcaagaagcttgatcctatggaattcttttctgggcactcatcacttcatgcagagaatcagcagaaggattgctttctgtctgctggaccctcaaacggaactaatctggcgctgtcaaatgttgatgttgaagcagctattagacaggcagaagatgaagctgactatatggctctcaagaggctggagcaggaagaggccgtggacaatcaagagttcagcgaggaggctgctggaagacttgaggaggatgatcttgtaaacgaggatgacactaaacctgatgaacacaccaatgaagagcataaatatcagtgttctgatttggtcaaggacaagcatgttgctttatctataaatcaattagatgaagaaaaggctataactttggctggaggagatggagatattgacatgcttgctgatgttaagcagatggctgctgcagctgctgcagcaggtcaagcaagttcgtcttttgaaaatcagctccggccaattgatagatatgccatgcggtttttggaactctgggatccaataattgataaagctgctataaactatcaggtcaatgttgaagaggaagaatgggaacttgaacgcattgaaaaactcaaagaagatttagaagcagaaattgatgaagaccaggaaccactttcttatgagtcatgggatgttgattttgctactacagcatatcggcaacatgttgaggctctagctcaaaaacagttgttggaggaacaagaaagacaagcccgtgaagcagcaaaagagttggaggaaaagaatgataatagcactcaacgaaaaaagtcaaaaaagaacaagaagaaggcagcgaagttcaaatctttgaagaaaggacgtttatcatctgagtcagaggttatggttgaggaaacatcagtagatactatgagcattgatgacaatgcaccctcaccagagctaatgagcgatgaatcagcacaccatcattctaacaagcataagaggataatgtcaaccaatgaggaagagaacagcaatagcagaagcctgaagaagctcaagaaagcccctaaatcgagtttcagttccgaggccttatcacctaagcattttcttgaaggcaagcagcttaagttgaaagatgaacttaatgattctgatcccaaatcgggggcaagaattaagagtgatggccgaatttctgtcccatgcatgccagtaaagcgtgtcatggtaatcaagcctgagagattgaagaagaagagcctatggtctcgcgattgtgcttcagactcgtggacaactgaggaagatgctgttctttgtgcaactgtaaatgagtacggccctctttgggaactggctagtgattctcttcattctgtaccaggtggtgcattttatagaggaagataccgtcaccctgtgcattgctgtgagagattccgggaattagtctgcaagcacatcttatcagcaacagacaattcaaacagtgagaaggatcaaactcagatgttgctcaatgtaatcagcgagcttcctaacaatgaattgcttctccagaaacatttcatggctgttctttcatctgtttggagatcgaagtctgcccgtgagtcccactgtgttatgagttactctaacacactccagaaacctggcagactcagcgagaactggtccatgacaaacttcagaccaaactttaatctagtaaggacagccctcgcagatgctcaggttcaatgtccaagaatggtagttccaacaagcaatcatgagtcccgccgtaactttttggaattggaattggatttcttgacagatcgagatgattatgaggcggactttccatctgttgttaacgtgtccatactagaaccggaaccattaaaacatgctgtggagccagtggagcactcactactgtccacactttcttatagacatgctgagaacagattcaggatggtatcagaaacttgttttgaaggggaaggttctcactgggcctcatctgctttccacacatacgatgccggtcggcataaatctggtcctaagtccataggaaagcacaaagcatcatcagaatctggaaggcctcccaaatccaaaattcaaaggaccactgaaccacaggaagtgccggttacaaataattttcataggattccggggcaacttctgcataactcagcagagttccacattacccagtccctatctgaccttggcatcagtgattctgaattcacctactttgataatcttcctcaagaggctgaaacagagtttgttccgtaccagtatgactctgatgtcctttctggcattgaggagttggatcctcttacagatttcacagacatcggatga
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| Protein seq | MASKGPRSKLDHETRARRQKALEAPRGEPRRTKTHWDHLLGEMAWLAKEFDAERKWKLSMAKRIAQRANKGVVDQATKDERKQKEEEVRLRKVALNISKDVKKFWTKIEKLVFYKNQLELEERKKKALDKQLDFLLGQTERYSTMLAENLVDVRLQNQENDSLQTNQRSQQELAQENINASSPTDVDNVEIDDDYNSSLGEEPEDDEHTIDEDEAQITEAERNEELAALQAEADLPLDDILKLYTKNKVQAFSVSRESSPDGRDVFSDSDSKDLIKDPLNQANGCNDESDHTSSDEGISSEEADDYQSYSEFVKKNTVKCNGNISSVDAKDDEDYVANDEGKDDEATLSEEEELAKKEDCDPLDEVKLLQKESEIPLEELLARYQKDGYADDDTTELENSPALSVEDVNANMPVDDESADTVEVNRDLSADTMKLTRDQSAETVKVNNDQSAEIVEGNNDTFEDHESAGMLGPEHVSGSVLQLETSEPIVQENTAKEGDVTDTKAMANGDNSDVIADAAAAARSAQPTGNTFSTTNVRTKFPFLLKHSLREYQHIGLDWLVAMYEKRLNGILADEMGLGKTIMTISLLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKQKRQGWMKPNYFHVCITTYRLVIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFCNPISGMVEGQDKVNKEVIDRLHNVLRPFILRRLKRDVEKQLPQKHEHVIYCRLSRRQRNLYEDFIASSETQATLASGNYFGMISIIMQLRKVCNHPDLFEGRPIISSFDMAGINMQISSSVGMVLDKGPFSQVDLSDMNFVFTQNEYNMTSWEEDEVAAIFSPSITLRGSGISRSTNDGQRSNGTNIFEEIHNSLWEERIKEANERAASIAWWNRVRCQKRPVYGTNIREVLTIKHPVSDILEKKKNPLCHMEFSSSLANLVLSSVDRFKTMLDFIESFTFAIPAARAPAPLFWCNKGKSPVLIEPAYREKCMNEFSPVFSPIRPAIVRRQVYFPDRRLIQFDCGKLQELAILLRRLKSEGHRALIFTQMTKMLDILEEFINLYGYTYLRLDGSTQPEERQTLMQRFNTNPKFFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQRGSYNTEFFKKLDPMEFFSGHSSLHAENQQKDCFLSAGPSNGTNLALSNVDVEAAIRQAEDEADYMALKRLEQEEAVDNQEFSEEAAGRLEEDDLVNEDDTKPDEHTNEEHKYQCSDLVKDKHVALSINQLDEEKAITLAGGDGDIDMLADVKQMAAAAAAAGQASSSFENQLRPIDRYAMRFLELWDPIIDKAAINYQVNVEEEEWELERIEKLKEDLEAEIDEDQEPLSYESWDVDFATTAYRQHVEALAQKQLLEEQERQAREAAKELEEKNDNSTQRKKSKKNKKKAAKFKSLKKGRLSSESEVMVEETSVDTMSIDDNAPSPELMSDESAHHHSNKHKRIMSTNEEENSNSRSLKKLKKAPKSSFSSEALSPKHFLEGKQLKLKDELNDSDPKSGARIKSDGRISVPCMPVKRVMVIKPERLKKKSLWSRDCASDSWTTEEDAVLCATVNEYGPLWELASDSLHSVPGGAFYRGRYRHPVHCCERFRELVCKHILSATDNSNSEKDQTQMLLNVISELPNNELLLQKHFMAVLSSVWRSKSARESHCVMSYSNTLQKPGRLSENWSMTNFRPNFNLVRTALADAQVQCPRMVVPTSNHESRRNFLELELDFLTDRDDYEADFPSVVNVSILEPEPLKHAVEPVEHSLLSTLSYRHAENRFRMVSETCFEGEGSHWASSAFHTYDAGRHKSGPKSIGKHKASSESGRPPKSKIQRTTEPQEVPVTNNFHRIPGQLLHNSAEFHITQSLSDLGISDSEFTYFDNLPQEAETEFVPYQYDSDVLSGIEELDPLTDFTDIG
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_02g0029500 | OsLima_02g0029500.02 | Chr02 | 30184953 | 30198098 | - | NAM | ||
| CDS seq | atggcatcaaaaggtcctcgatcaaagttagatcatgagacaagagccagacgccagaaggctcttgaagccccaaggggggagcctcgaaggacgaaaactcactgggaccatcttcttggagaaatggcttggctggcaaaggagtttgatgctgagagaaaatggaagctgtccatggctaaaaggattgctcaaagagctaataagggtgtagttgaccaagcaacaaaggacgagagaaaacagaaggttttttataagaaccaactggagcttgaggaaaggaaaaaaaaggccctagacaagcaacttgatttcctcttaggacagactgaaagatattcaacaatgctggcagaaaatcttgttgatgtgcgccttcaaaatcaagaaaatgactctttacagactaatcaaagatcccagcaggaactagcacaagagaacataaatgcatcaagtcctactgatgttgataatgtggaaatcgatgatgattacaacagttccttgggtgaagagccagaagatgatgaacacacaatcgatgaggatgaagctcaaattacggaggctgagcgcaacgaggaattggctgctttgcaggcagaagctgatctaccactggatgatattctcaagttgtacactaaaaataaagttcaagctttctcagttagcagggaaagcagtccagatggcagagacgtttttagtgactcagattcaaaggatttgattaaagatcctttgaaccaggctaatggatgcaacgatgaatctgatcatacttcaagtgatgaaggcatttcttctgaggaagcagatgattaccagtcttactctgagtttgtgaaaaagaacactgtgaaatgcaatggcaatatctcatctgttgatgcaaaggacgacgaagattatgttgctaatgatgaaggaaaggatgatgaagctactttgtctgaagaggaagagttggcgaagaaagaagactgtgatcctctagatgaggttaagttactgcagaaagagagtgagatcccacttgaagaacttcttgcaagataccaaaaggatggctatgcagatgatgacacaacagaattggaaaattcacctgcactatcagttgaggatgtcaatgccaacatgcctgtggatgatgagtctgcagacaccgtggaggtaaacagggatctttctgcagataccatgaaactgaccagagatcagtctgcagagaccgtaaaagtgaataatgaccagtctgcagagattgtggagggcaacaatgacacatttgaagatcatgaatctgcaggcatgctgggacctgagcatgtcagtggtagtgttctacaactagaaacatcagagcctattgtacaggaaaatactgctaaagagggtgatgtaactgatactaaagcgatggccaatggagataatagtgatgtgattgctgatgctgcagctgctgcaagatcagcacaaccgactggtaacacgttctcaacaacaaatgtgcggacaaaattccctttccttcttaagcattctctacgagaatatcagcacattggactggactggcttgttgctatgtatgaaaagaggctgaatggaattctagcagatgaaatgggtttggggaagacgattatgaccatctccttgctagcacaccttgcatgtgagaagggaatatggggtccacatcttattgtagtgccaactagtgttatgctaaattgggagactgaatttctcaaatggtgtcctgcgtttaaaatactgacatattttggaagtgcaaaagagagaaaacagaaacgtcagggttggatgaaaccaaattacttccatgtatgcatcactacatacaggcttgttattcaggactccaaagtgtttaagcgaaaaaaatggaagtatcttattcttgatgaggctcatttgataaagaactggaaatcacaaagatggcagactttactaaattttaattcgaagcgacgcattcttttaactggaactcctctacaaaatgacctcatggaactttggtctctcatgcactttttgatgcctcatgtatttcagtcacatcaagagttcaaggactggttctgcaatccaatttcaggcatggtagagggccaagacaaggtaaacaaagaagtgatagatcggttgcacaacgtccttcgtccgtttatacttcgtcgattgaaacgggatgtggagaaacagttgccacagaagcatgagcatgtcatatattgccgactttccagaaggcaaaggaacttgtatgaagatttcattgcaagctcagagacacaggcaacattggcaagtggaaattattttggcatgattagcatcattatgcagcttagaaaggtttgtaaccatccagatctttttgaaggccgtccaattatcagctcttttgacatggcagggatcaacatgcaaatcagctcttctgttggcatggtccttgataaaggcccattttctcaggttgacctgtcagatatgaattttgtatttactcaaaatgaatataatatgacttcttgggaggaagatgaggttgctgccattttttctccaagcataaccctcaggggttctggcatttctcgctctactaatgatggtcagagaagcaatgggacaaatatttttgaagagattcacaattctttgtgggaggagagaataaaagaagctaatgaaagagcagcttccattgcatggtggaatagggtaagatgccagaagaggcctgtttatggcacaaatattcgggaggttttgaccataaagcatcctgtgtctgatattctcgagaagaagaagaaccctttatgccacatggaattttcatcaagcctagcaaatcttgttctatcatcggtggatcgcttcaagacaatgcttgattttattgagtcatttacttttgcaattcctgctgcacgagcgcctgcaccattattctggtgcaacaaagggaaatctcctgttcttattgaaccagcatacagagagaaatgcatgaatgagttttctcctgttttctctcctataaggcctgcgattgttcgccgtcaagtgtactttcctgacaggcgtttgatccagtttgactgtggaaagttgcaggaacttgctattttgttgaggcgtttgaagtcagaaggacacagggccttgatatttactcagatgactaagatgcttgatatactggaggagttcattaatctatatgggtatacgtatttgcggttagatggatcaacccagccagaagagaggcagacactgatgcagaggtttaatactaacccaaagttttttctttttatcttatccactcgaagtggtggtgtgggaatcaacctagtaggtgcagacactgtcattttctatgatagtgactggaatcctgcaatggaccaacaggcccaagacagatgccacaggataggtcaaactcgtgaagttcacatctatagactgatcagtgagagcactatagaggagaatatactcaagaaagccaatcagaagcgagctcttgatgatctagtgatacaacgtggtagctacaatacagagttcttcaagaagcttgatcctatggaattcttttctgggcactcatcacttcatgcagagaatcagcagaaggattgctttctgtctgctggaccctcaaacggaactaatctggcgctgtcaaatgttgatgttgaagcagctattagacaggcagaagatgaagctgactatatggctctcaagaggctggagcaggaagaggccgtggacaatcaagagttcagcgaggaggctgctggaagacttgaggaggatgatcttgtaaacgaggatgacactaaacctgatgaacacaccaatgaagagcataaatatcagtgttctgatttggtcaaggacaagcatgttgctttatctataaatcaattagatgaagaaaaggctataactttggctggaggagatggagatattgacatgcttgctgatgttaagcagatggctgctgcagctgctgcagcaggtcaagcaagttcgtcttttgaaaatcagctccggccaattgatagatatgccatgcggtttttggaactctgggatccaataattgataaagctgctataaactatcaggtcaatgttgaagaggaagaatgggaacttgaacgcattgaaaaactcaaagaagatttagaagcagaaattgatgaagaccaggaaccactttcttatgagtcatgggatgttgattttgctactacagcatatcggcaacatgttgaggctctagctcaaaaacagttgttggaggaacaagaaagacaagcccgtgaagcagcaaaagagttggaggaaaagaatgataatagcactcaacgaaaaaagtcaaaaaagaacaagaagaaggcagcgaagttcaaatctttgaagaaaggacgtttatcatctgagtcagaggttatggttgaggaaacatcagtagatactatgagcattgatgacaatgcaccctcaccagagctaatgagcgatgaatcagcacaccatcattctaacaagcataagaggataatgtcaaccaatgaggaagagaacagcaatagcagaagcctgaagaagctcaagaaagcccctaaatcgagtttcagttccgaggccttatcacctaagcattttcttgaaggcaagcagcttaagttgaaagatgaacttaatgattctgatcccaaatcgggggcaagaattaagagtgatggccgaatttctgtcccatgcatgccagtaaagcgtgtcatggtaatcaagcctgagagattgaagaagaagagcctatggtctcgcgattgtgcttcagactcgtggacaactgaggaagatgctgttctttgtgcaactgtaaatgagtacggccctctttgggaactggctagtgattctcttcattctgtaccaggtggtgcattttatagaggaagataccgtcaccctgtgcattgctgtgagagattccgggaattagtctgcaagcacatcttatcagcaacagacaattcaaacagtgagaaggatcaaactcagatgttgctcaatgtaatcagcgagcttcctaacaatgaattgcttctccagaaacatttcatggctgttctttcatctgtttggagatcgaagtctgcccgtgagtcccactgtgttatgagttactctaacacactccagaaacctggcagactcagcgagaactggtccatgacaaacttcagaccaaactttaatctagtaaggacagccctcgcagatgctcaggttcaatgtccaagaatggtagttccaacaagcaatcatgagtcccgccgtaactttttggaattggaattggatttcttgacagatcgagatgattatgaggcggactttccatctgttgttaacgtgtccatactagaaccggaaccattaaaacatgctgtggagccagtggagcactcactactgtccacactttcttatagacatgctgagaacagattcaggatggtatcagaaacttgttttgaaggggaaggttctcactgggcctcatctgctttccacacatacgatgccggtcggcataaatctggtcctaagtccataggaaagcacaaagcatcatcagaatctggaaggcctcccaaatccaaaattcaaaggaccactgaaccacaggaagtgccggttacaaataattttcataggattccggggcaacttctgcataactcagcagagttccacattacccagtccctatctgaccttggcatcagtgattctgaattcacctactttgataatcttcctcaagaggctgaaacagagtttgttccgtaccagtatgactctgatgtcctttctggcattgaggagttggatcctcttacagatttcacagacatcggatga
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| Protein seq | MASKGPRSKLDHETRARRQKALEAPRGEPRRTKTHWDHLLGEMAWLAKEFDAERKWKLSMAKRIAQRANKGVVDQATKDERKQKVFYKNQLELEERKKKALDKQLDFLLGQTERYSTMLAENLVDVRLQNQENDSLQTNQRSQQELAQENINASSPTDVDNVEIDDDYNSSLGEEPEDDEHTIDEDEAQITEAERNEELAALQAEADLPLDDILKLYTKNKVQAFSVSRESSPDGRDVFSDSDSKDLIKDPLNQANGCNDESDHTSSDEGISSEEADDYQSYSEFVKKNTVKCNGNISSVDAKDDEDYVANDEGKDDEATLSEEEELAKKEDCDPLDEVKLLQKESEIPLEELLARYQKDGYADDDTTELENSPALSVEDVNANMPVDDESADTVEVNRDLSADTMKLTRDQSAETVKVNNDQSAEIVEGNNDTFEDHESAGMLGPEHVSGSVLQLETSEPIVQENTAKEGDVTDTKAMANGDNSDVIADAAAAARSAQPTGNTFSTTNVRTKFPFLLKHSLREYQHIGLDWLVAMYEKRLNGILADEMGLGKTIMTISLLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKQKRQGWMKPNYFHVCITTYRLVIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFCNPISGMVEGQDKVNKEVIDRLHNVLRPFILRRLKRDVEKQLPQKHEHVIYCRLSRRQRNLYEDFIASSETQATLASGNYFGMISIIMQLRKVCNHPDLFEGRPIISSFDMAGINMQISSSVGMVLDKGPFSQVDLSDMNFVFTQNEYNMTSWEEDEVAAIFSPSITLRGSGISRSTNDGQRSNGTNIFEEIHNSLWEERIKEANERAASIAWWNRVRCQKRPVYGTNIREVLTIKHPVSDILEKKKNPLCHMEFSSSLANLVLSSVDRFKTMLDFIESFTFAIPAARAPAPLFWCNKGKSPVLIEPAYREKCMNEFSPVFSPIRPAIVRRQVYFPDRRLIQFDCGKLQELAILLRRLKSEGHRALIFTQMTKMLDILEEFINLYGYTYLRLDGSTQPEERQTLMQRFNTNPKFFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQRGSYNTEFFKKLDPMEFFSGHSSLHAENQQKDCFLSAGPSNGTNLALSNVDVEAAIRQAEDEADYMALKRLEQEEAVDNQEFSEEAAGRLEEDDLVNEDDTKPDEHTNEEHKYQCSDLVKDKHVALSINQLDEEKAITLAGGDGDIDMLADVKQMAAAAAAAGQASSSFENQLRPIDRYAMRFLELWDPIIDKAAINYQVNVEEEEWELERIEKLKEDLEAEIDEDQEPLSYESWDVDFATTAYRQHVEALAQKQLLEEQERQAREAAKELEEKNDNSTQRKKSKKNKKKAAKFKSLKKGRLSSESEVMVEETSVDTMSIDDNAPSPELMSDESAHHHSNKHKRIMSTNEEENSNSRSLKKLKKAPKSSFSSEALSPKHFLEGKQLKLKDELNDSDPKSGARIKSDGRISVPCMPVKRVMVIKPERLKKKSLWSRDCASDSWTTEEDAVLCATVNEYGPLWELASDSLHSVPGGAFYRGRYRHPVHCCERFRELVCKHILSATDNSNSEKDQTQMLLNVISELPNNELLLQKHFMAVLSSVWRSKSARESHCVMSYSNTLQKPGRLSENWSMTNFRPNFNLVRTALADAQVQCPRMVVPTSNHESRRNFLELELDFLTDRDDYEADFPSVVNVSILEPEPLKHAVEPVEHSLLSTLSYRHAENRFRMVSETCFEGEGSHWASSAFHTYDAGRHKSGPKSIGKHKASSESGRPPKSKIQRTTEPQEVPVTNNFHRIPGQLLHNSAEFHITQSLSDLGISDSEFTYFDNLPQEAETEFVPYQYDSDVLSGIEELDPLTDFTDIG
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| RI | Chr02 | 30184953 | 30186066 | - | OsLima_02g0029500.02 | OsLima_02g0029500.02,OsLima_02g0029500.01 | All |
| SE | Chr02 | 30196412 | 30197308 | - | OsLima_02g0029500.01 | OsLima_02g0029500.02,OsLima_02g0029500.01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.436976 | 0.448295 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0689800 | RBH | 2.909490 | 3.568332 | 9.460826 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g46450 | RBH | 1.888720 | 2.220589 | 2.270799 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0689800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0029650 | RBH | 1.260016 | 9.793962 | 9.979626 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0029720 | RBH | 0.657550 | 4.128826 | 4.946715 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0029580 | RBH | 2.339341 | 7.925515 | 15.376915 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0029170 | RBH | 0.382277 | 0.432097 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0029390 | RBH | 19.925341 | 18.609558 | 41.496246 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0459900 | RBH | 8.5250435 | 23.417097 | 26.7351265 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0029190 | RBH | 0.474930 | 0.827296 | 3.981647 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0487800 | RBH | 9.028072 | 26.1460755 | 28.9586375 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0022900 | RBH | 0.133815 | 0.166895 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0029240 | RBH | 1.182022 | 13.204488 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0029540 | RBH | 9.776196 | 28.069189 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0029390 | RBH | 1.773472 | 1.770179 | 2.458259 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0029070 | RBH | 0.728820 | 8.614360 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G029640 | RBH | 1.091382 | 3.264412 | 5.016592 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0029400 | RBH | 3.505079 | 28.469465 | 10.587730 |
