Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_02g0025390 | OGI:02070550 | 11/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr02:26615446-26616679 | ||||||||
| Gene Symbol | WAK13, OsWAK13 | ||||||||||
| DNA seq | ttaggcgttcttcacaagaacattggagatgcgtatgcgtggattaccaatggcgatcttccatccgagctgggacttgttatccccgcatgtgccgttgtaagcgttgcctatcgtcttgtcagggcaagtgcaggtgaatcctccgggagtgttgacacatgtgccaggaacggagcacgggtacctgaacctgctctcgtcgcattcgttgatatctgcagaggcaagaaaccaaaatggttcatgggctgaacggcattggcacaccggagcaacgggcggcctatgtggagctcaccttggcagccgtcgaggaggtaggggttgccgtcgtagccggcggagcagttgcagaggtagccgcggccacggccgtacctggagtcgacgcactcgctgttggcgctgacgcaggcgtaggccgacgcgttccgcttggcctcctcgcacgtcttgttcccgatggcccagtcgagcaccagcggcagctggccgccgttggacgccatgaactcgtcggtggtgacgtacgaggcgcggaagtcgaacgccgaggcttcgaccagcacggcgtagctgcagcggctgaacccggcgatcgcagacgtgttgaacttctcctcgaaggagacctggtacccgttgaggccggccgggatggccgtctggcagcaccccacgccggcgcaggagccgttctccttctccagccggcccgcgccggggcacatggccatgcacccggtcatgtaccggtcggcaccggcggtgccgttgggcgagaggatgtaggcgagggagttgcacccgacgacggtgaagcggttgagcgcgtcgttgatgcggaagttggtgatggacatgtcgtaccaccagttgctctgcccgttcatggcggacgtgctgccgttgtagcaccacgggttgatggcgctgtagatgcgcagctgcccccgccgcaccgacacgtccaccacctcgatctcgtagttgtacacccgcagccgcccgtccgcgctgcggttgcagctcagcacgaacgtccagtccccggtctcgaggtggcacccgctgccgacgccgaacgggtacgggatctccacgtcgccgcaccgccgcaggcacgtctcgctcggctgcatcgccgccgccgcttgactcgccgacagggcaaggatgatcagtggaagaagcattttttttgggtcgtgggtaaactgtcccggacgag
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| CDS seq | atgcttcttccactgatcatccttgccctgtcggcgagtcaagcggcggcggcgatgcagccgagcgagacgtgcctgcggcggtgcggcgacgtggagatcccgtacccgttcggcgtcggcagcgggtgccacctcgagaccggggactggacgttcgtgctgagctgcaaccgcagcgcggacgggcggctgcgggtgtacaactacgagatcgaggtggtggacgtgtcggtgcggcgggggcagctgcgcatctacagcgccatcaacccgtggtgctacaacggcagcacgtccgccatgaacgggcagagcaactggtggtacgacatgtccatcaccaacttccgcatcaacgacgcgctcaaccgcttcaccgtcgtcgggtgcaactccctcgcctacatcctctcgcccaacggcaccgccggtgccgaccggtacatgaccgggtgcatggccatgtgccccggcgcgggccggctggagaaggagaacggctcctgcgccggcgtggggtgctgccagacggccatcccggccggcctcaacgggtaccaggtctccttcgaggagaagttcaacacgtctgcgatcgccgggttcagccgctgcagctacgccgtgctggtcgaagcctcggcgttcgacttccgcgcctcgtacgtcaccaccgacgagttcatggcgtccaacggcggccagctgccgctggtgctcgactgggccatcgggaacaagacgtgcgaggaggccaagcggaacgcgtcggcctacgcctgcgtcagcgccaacagcgagtgcgtcgactccaggtacggccgtggccgcggctacctctgcaactgctccgccggctacgacggcaacccctacctcctcgacggctgccaagatatcaacgaatgcgacgagagcaggttcaggtacccgtgctccgttcctggcacatgtgtcaacactcccggaggattcacctgcacttgccctgacaagacgataggcaacgcttacaacggcacatgcggggataacaagtcccagctcggatggaagatcgccattggtaatccacgcatacgcatctccaatgttcttgtgaagaacgcctaa
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| Protein seq | MLLPLIILALSASQAAAAMQPSETCLRRCGDVEIPYPFGVGSGCHLETGDWTFVLSCNRSADGRLRVYNYEIEVVDVSVRRGQLRIYSAINPWCYNGSTSAMNGQSNWWYDMSITNFRINDALNRFTVVGCNSLAYILSPNGTAGADRYMTGCMAMCPGAGRLEKENGSCAGVGCCQTAIPAGLNGYQVSFEEKFNTSAIAGFSRCSYAVLVEASAFDFRASYVTTDEFMASNGGQLPLVLDWAIGNKTCEEAKRNASAYACVSANSECVDSRYGRGRGYLCNCSAGYDGNPYLLDGCQDINECDESRFRYPCSVPGTCVNTPGGFTCTCPDKTIGNAYNGTCGDNKSQLGWKIAIGNPRIRISNVLVKNA |
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| Function | Wall-associated receptor kinase 2 [UniProtKB/Swiss-Prot:Q9LMP1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_02g0025390 | OsLima_02g0025390.01 | Chr02 | 26615446 | 26616679 | - | NAM | ||
| CDS seq | atgcttcttccactgatcatccttgccctgtcggcgagtcaagcggcggcggcgatgcagccgagcgagacgtgcctgcggcggtgcggcgacgtggagatcccgtacccgttcggcgtcggcagcgggtgccacctcgagaccggggactggacgttcgtgctgagctgcaaccgcagcgcggacgggcggctgcgggtgtacaactacgagatcgaggtggtggacgtgtcggtgcggcgggggcagctgcgcatctacagcgccatcaacccgtggtgctacaacggcagcacgtccgccatgaacgggcagagcaactggtggtacgacatgtccatcaccaacttccgcatcaacgacgcgctcaaccgcttcaccgtcgtcgggtgcaactccctcgcctacatcctctcgcccaacggcaccgccggtgccgaccggtacatgaccgggtgcatggccatgtgccccggcgcgggccggctggagaaggagaacggctcctgcgccggcgtggggtgctgccagacggccatcccggccggcctcaacgggtaccaggtctccttcgaggagaagttcaacacgtctgcgatcgccgggttcagccgctgcagctacgccgtgctggtcgaagcctcggcgttcgacttccgcgcctcgtacgtcaccaccgacgagttcatggcgtccaacggcggccagctgccgctggtgctcgactgggccatcgggaacaagacgtgcgaggaggccaagcggaacgcgtcggcctacgcctgcgtcagcgccaacagcgagtgcgtcgactccaggtacggccgtggccgcggctacctctgcaactgctccgccggctacgacggcaacccctacctcctcgacggctgccaagatatcaacgaatgcgacgagagcaggttcaggtacccgtgctccgttcctggcacatgtgtcaacactcccggaggattcacctgcacttgccctgacaagacgataggcaacgcttacaacggcacatgcggggataacaagtcccagctcggatggaagatcgccattggtaatccacgcatacgcatctccaatgttcttgtgaagaacgcctaa
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| Protein seq | MLLPLIILALSASQAAAAMQPSETCLRRCGDVEIPYPFGVGSGCHLETGDWTFVLSCNRSADGRLRVYNYEIEVVDVSVRRGQLRIYSAINPWCYNGSTSAMNGQSNWWYDMSITNFRINDALNRFTVVGCNSLAYILSPNGTAGADRYMTGCMAMCPGAGRLEKENGSCAGVGCCQTAIPAGLNGYQVSFEEKFNTSAIAGFSRCSYAVLVEASAFDFRASYVTTDEFMASNGGQLPLVLDWAIGNKTCEEAKRNASAYACVSANSECVDSRYGRGRGYLCNCSAGYDGNPYLLDGCQDINECDESRFRYPCSVPGTCVNTPGGFTCTCPDKTIGNAYNGTCGDNKSQLGWKIAIGNPRIRISNVLVKNA
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0623600 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g41500 | SBH | 1.657611 | 1.721222 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0623600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0025630 | SBH | 0.040646 | 0.0 | 0.403740 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0025780 | SBH | 0.055709 | 0.0 | 0.207529 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0025600 | SBH | 0.182631 | 0.0 | 0.143559 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0025200 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0025300 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0404400 | RBH | 0.3850005 | 0.403257 | 0.0058235 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0025190 | RBH | 0.0 | 0.0 | 0.100858 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0433300 | SBH | 0.189664 | 0.4274165 | 0.0110375 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0019720 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0025210 | RBH | 0.000000 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0025540 | RBH | 0.0 | 5.485889 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0025430 | SBH | 0.178774 | 0.0 | 0.144765 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0024940 | RBH | 0.0 | 0.602374 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G025600 | SBH | 0.067681 | 0.191978 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0025460 | SBH | 0.102705 | 0.0 | 0.0 |
