Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_02g0008820 | OGI:02018610 | 15/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr02:6549250-6551515 | ||||||||
| Gene Symbol | RLCK66, OsRLCK66 | ||||||||||
| DNA seq | atgccaggtgagatttgtgaacacatttcttgttgccattttttctcagtgggatgtggcattccttgaatttaaagctccaatggtagtttacatccatggtgagacttcagattctctggtccacaatagatacataataattatagtctgtcacataattcagaattttgttaaatggtttccagtgtcctacttaagtgaaattgttcagtgaaagatccatgtaaaaattttatggcatctataaccctttcgacatggatctttaatatccaaaggctacattttcttccgtaaatagtcacaataatgttgccactgcaggattgaagcacattgtgaagttgaaaggtgctcactgcaatcatgttgtacaggtatgtcccgttaaacagtagaatgaagggagacaatagagttcgatgggtgccaaatagaatgatgttgtgtgtcccaaaactctttatttcataacagggtctgtcaagttctatttgtcccagttagttgatgctacagaaaacttctccgacggaaataaaattggacaaggtagctttggctgtgtttacaaggtactctcttcaatagaaaaaaaaatgtcatcctagatttgcgttcaatcatcttctattcattttagtgagacatatatctagaatatgtaatttggatttaccaaaataacatgattattttttttcatatacatcttcaatgaagacaagccaagaaaaattaattggttgaagtgacttcttattgactttgcaaagtaaaaaaggaaccaccttatcttgtccggaggagtaatgaatatgcttgcttcacaaaattcagtttccatactttgatatcataagaaacagatcatttgcttttcctactgttattcatgtgtttactgtgattccaattcatcctaattaatctttgaggatattgcaaaaatcatagctatcaaacgacaatggaatgtgttgtaactttagaaacttcattattatataattggtttcttctttaggtcaactgcactttttgtttgcagtcagggtcaactgcacgatgggcttgaggtagctgttaaaagatgttttgagttaccttgttcacgtaatcaaatggatttccaagatttggagttccaaaatgagatttgcttccttgggaagcttcagcacaccaatgtagttaagcttctgggatactgtattcagggaacagaaaggattttggtctatgagtatatgctgattggaagcgttgataccttcatctttggcatgtgttcagtattacttcacctcaattttggatcaaaagttctgtgcagactatgcttagttaatgatctcatttgtgttaccattttataggtgcaagaacaagaaggttgcatctggactggtctacacgctctcggataattgatgggatagctgagggactgctttatctccataagcactgcggactacatattgtacatggagatctgaagccaagcaacattcttctggactccaacatgaatcccaagatctccgattttggcctggctagaaggtatagttcaggtgtagatgaagagtacaccgatcgcatactggggtcaatgtaagaacttatcagatcgatatcacaatttttgatatcccagcgggctcttttatccttcttattgtttaagctcttaatttttgtttccacattttagtggttttattgctcccgaatgtcgggaaagacgacttttctcaacgaagtctgatgtgtatggctttggagcattggttctcgagatcattagtggaaagcgatgcttttcacttgtgagtggagattctggagacgactatcgatttctgaacaagagggtgcgtagaatttttgaaatttgtctcgaattttgaatattaatggtgcccctgtcatcatttattaacttgcacaaccaagtgctaatttaatggccaatctatatgagaatttttgtttttcttacccacttcctcaggcatggcacttatggagaacaggaagattgatcaagcttgtcgattcgccctcaggtgatgaattggagacgagagagatactaagatgcattcacatagcactgctgtgtgtggaggagaaccctgccaaccagcccaccatgcaggaggttgttctgatgttaagctgccagactgctctgctgcctaaacctcgttgtccagcttacctaagggcggaaattgtgtcgacacatccatag
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| CDS seq | atgccagggtctgtcaagttctatttgtcccagttagttgatgctacagaaaacttctccgacggaaataaaattggacaaggtgcaagaacaagaaggttgcatctggactggtctacacgctctcggataattgatgggatagctgagggactgctttatctccataagcactgcggactacatattgtacatggagatctgaagccaagcaacattcttctggactccaacatgaatcccaagatctccgattttggcctggctagaaggtatagttcaggtgtagatgaagagtacaccgatcgcatactggggtcaattggttttattgctcccgaatgtcgggaaagacgacttttctcaacgaagtctgatgtgtatggctttggagcattggttctcgagatcattagtggaaagcgatgcttttcacttgtgagtggagattctggagacgactatcgatttctgaacaagagggcatggcacttatggagaacaggaagattgatcaagcttgtcgattcgccctcaggtgatgaattggagacgagagagatactaagatgcattcacatagcactgctgtgtgtggaggagaaccctgccaaccagcccaccatgcaggaggttgttctgatgttaagctgccagactgctctgctgcctaaacctcgttgtccagcttacctaagggcggaaattgtgtcgacacatccatag
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| Protein seq | MPGSVKFYLSQLVDATENFSDGNKIGQGARTRRLHLDWSTRSRIIDGIAEGLLYLHKHCGLHIVHGDLKPSNILLDSNMNPKISDFGLARRYSSGVDEEYTDRILGSIGFIAPECRERRLFSTKSDVYGFGALVLEIISGKRCFSLVSGDSGDDYRFLNKRAWHLWRTGRLIKLVDSPSGDELETREILRCIHIALLCVEENPANQPTMQEVVLMLSCQTALLPKPRCPAYLRAEIVSTHP |
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| Function | Cysteine-rich receptor-like protein kinase 10 [UniProtKB/Swiss-Prot:Q8GYA4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_02g0008820 | OsLima_02g0008820.01 | Chr02 | 6549250 | 6551515 | + | NAM | ||
| CDS seq | atgccagggtctgtcaagttctatttgtcccagttagttgatgctacagaaaacttctccgacggaaataaaattggacaaggtgcaagaacaagaaggttgcatctggactggtctacacgctctcggataattgatgggatagctgagggactgctttatctccataagcactgcggactacatattgtacatggagatctgaagccaagcaacattcttctggactccaacatgaatcccaagatctccgattttggcctggctagaaggtatagttcaggtgtagatgaagagtacaccgatcgcatactggggtcaattggttttattgctcccgaatgtcgggaaagacgacttttctcaacgaagtctgatgtgtatggctttggagcattggttctcgagatcattagtggaaagcgatgcttttcacttgtgagtggagattctggagacgactatcgatttctgaacaagagggcatggcacttatggagaacaggaagattgatcaagcttgtcgattcgccctcaggtgatgaattggagacgagagagatactaagatgcattcacatagcactgctgtgtgtggaggagaaccctgccaaccagcccaccatgcaggaggttgttctgatgttaagctgccagactgctctgctgcctaaacctcgttgtccagcttacctaagggcggaaattgtgtcgacacatccatag
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| Protein seq | MPGSVKFYLSQLVDATENFSDGNKIGQGARTRRLHLDWSTRSRIIDGIAEGLLYLHKHCGLHIVHGDLKPSNILLDSNMNPKISDFGLARRYSSGVDEEYTDRILGSIGFIAPECRERRLFSTKSDVYGFGALVLEIISGKRCFSLVSGDSGDDYRFLNKRAWHLWRTGRLIKLVDSPSGDELETREILRCIHIALLCVEENPANQPTMQEVVLMLSCQTALLPKPRCPAYLRAEIVSTHP
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.000000 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0710500 | SBH | 1.164250 | 0.798859 | 0.337554 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g12130 | RBH | 0.000000 | 0.311849 | 0.137600 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0710500 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0008600 | RBH | 0.0 | 0.000000 | 1.417019 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0008690 | RBH | 0.000000 | 1.876801 | 2.272627 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0008490 | RBH | 0.0 | 0.0 | 2.703409 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0008420 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0008560 | RBH | 0.0 | 0.0 | 1.557517 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0106300 | RBH | 0.594346 | 1.468509 | 7.325785 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0008400 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0110400 | RBH | 0.084578 | 0.046657 | 7.1254955 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0023310 | SBH | 0.000000 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0008490 | RBH | 0.0 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0008800 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0008770 | RBH | 0.0 | 0.000000 | 0.317093 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0008540 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G008680 | RBH | 0.0 | 0.0 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0030710 | SBH | 0.000000 | 41.642551 | 1.973016 |
