Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_02g0007460 | OGI:02015640 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr02:5397777-5404479 | ||||||||
| Gene Symbol | OsSRK, SRK | ||||||||||
| DNA seq | tatgaacttgttaaaaaattgagtttctgctgcatctctgtgtccgcatatgagatgagatcaaaacaccttaattcacaaaaaggagcatgatgcactacagtatacagtatagcagcagcaagatcatggcatcgccggcggctcgccactggacactgccaccaccagaggcccgtactccatcgcctcgatcgcccccaccctcctggccacctccgccatggtcggcctcctccacggctcgtcggcggtgcagtcgcgggcgacgtcgagcacccgcgccatctgctcccgctccgcgccggacaccggcaggcaagcgtcgaacacctcgccgccacgcccgcgcgccgccatccaccgcacccacccgacgaggctcccgccgccgccgcgttcgtcgtcgccctccgccgtcacctccgccgacgaccacgtcggcggccgccccgtgagcagctccagcatgacgacgccgaagctgtacacgtcgcccttggcggtgcactgcatcgccagcgcgtactccggcgggatgtagccgagcgtgccggcgaggacggtgctgacgtgggtctcgcacgcgctgatgatccgcgcgaggccgaagtcggacacccgcggctggaggccctcgcctaggagaacgttgctggacttgacgtcgcggtggatgacgtgcggcacgaagccgtggtgcaggaacgcgagcccgcgggcggcgccgccgcagatcgtgagccgctccggccacccgagcgccgcgccgccgccgccgcgcagccggtcctccaggctgccgtgctccatgtactcgtagacgaggaaccgctcgtcgccggcggcgcagtagccgaggagggggacgaggttggggtgcctcaccttgccgacggtctccatctcagcgcggaactcgcgttcgccgccctggaaccggcggccgacgccgtggagcctcttgacggcgaccctccggccgccggggagctccgccctgtacacggtgccgaagccgccgtcgccgacgacgtgcatcccgtcgaaattcccggtggctctcatgatctcgtccacggtgaccctcacaggcgcgtgctcgaacgtcgcgaggttgatgctcggtggctccctcttcttcatcctcctcctccccaaaagattgtcactcaaggttgtctcatggtcagccatggcgttgtcaccggcagggacaaggacaaactgcctccttctcaacatcttcctccgtcgtctcagataaaccaccaggatcaccaccagcacaatgacaatggccgttgcaatgcaacaaatggttgcttccagtacatggaacggatgatccggcatctttcgatcgacacggttagcggcgcaaaccccgccttcttcagcagcacaatctgccaaggtgaaagtgccaccgtcgcggttaccggagaagtttgcgaaggtcaggccaaacataccgcagataccacaagggatggtgccactgaaatcattgcttgataggtcaagatagtacaaagaagtgacccttgctattgctgatggcaatcttccagtgaggctgttgttgtggagatcaagataggtcagctttgtgaagttggagatcgattcatccaggctccctgagaaatggttgctgcttgcattgaagaagatcagtgggattggggattctttgtcctcatgacaggaaaatgggatttgtccagagatgttgttgtcactgacatccaggtggtttaggctctctttgcagagtagatccaatggaagagtgccggtaagcgcgttacccgataagtccagcattgtgatctggggaagaatgttgccaatgccagaaggaatggagccactgagtctgttgttagacagaagaaggccttggaggcttgccaatggtacaggccatggaaggacaggtccaaccaatgcattggaagatagatcaatggttgttatgtttctcagctcagcaagttccacaggtatagtgccacttaacaagttgtcttgcaggtgtagctctaccagtatagaacaattgttgattgctctcgggatgtgaccagtcaatctgttccgcgacagatcaatcaatccaatgtgttgcacgtactccaattcagaatgggactcgcgcgagaaagccacgcatagctcagaagggatagcgcctgacagccgattccgggacaggaccaaggtgttgagctttgtcaagtgagatatggccttggggatgtgccctgtcagattgttacagctcaagtccaatgtgacaaggtttctgcagttgaagagctgtattggaatgtcctcagataacatgttgccactgagagacagtgctgtcagattccttagagcgccgatcgatcgagggagaggtccttgcaagtagtttctgtcgatgctcaacgattgcaagctcaagagcttaccaatgctctctgtgatcatgccagttagctggttatcactgagagagatgtccaagatggttgatgattcccataacctgtcagggatcatccctgtgaaattgttatgtgacaaatcaagtgacaccagtggtagcaaagctaagtattctggtatctctccgtggagatggttatctagcaagcttagctcagtaaggttcttgcatcccttaaatgtctcatcgatactcccggtcagattgttatcattcaatctaagtatctgcagaaaggtgccttgacatatcttggcagggatagatcctgacagctggttggattctgcagagaaactaaccagatgtaatggaagacccggtagaggtccgtcgaacatgttctgcgcaagcgatatagatgaaacattactccagttctgaatccaatcaggaatgtggcctgagagtctgtttccttccacatcaaacaagacaacggcaactaaatctgcaagttcttcaggtatagtgccagtgaagttattgccggacagaactagagtagtaagcttcttgcaattgccgagttctttcggtatgctcccagtgaaccctgcactcttcgccatcagctgcctcagattgcgtagctcaccaacagatgctggaagctcaccactgaagctgttgaatgatatataaagcccttccaagatttcgagattgccgatcgacaaagggacggtgtccatgagattgcatttgaggagattgagtacttcaagctgcttcagattaccaatctcttctgggatgcttccagttaactcattgtctgataggattaaactttgcagatttttcagttgacaaagctccttggggattgcccccaccaaaccatttgacgataaatcgagcttgacaaggttgactaacgctcttattcccgggaatattgatccggtgagattgttattgtttgcatcaaggtacaagagccgagatagattactgaaagatgccggtattgatccactaaatgcatttgtgtgaatgtcgaggtactccaggttcttcagactgcctagctctggagggaggcctccagagaaggaattcgtggatatggatagcacggtgagctgctgaaggtgagcaatggcagggcttagttgtccagagaacatgttgttgtcaagcaccataactttcagcatcttcaagtcaaataatgaggcaggtagagggccaccaagctgattatcactcaaatctaggtgctggagatgctgcagattcaccatggcttctggaagctcaccggaaaacccgcacccgcttacattgagccgaacgagtgactggaatgcaatgatctgtgatggaaaatcgacgtagagtggcgtagatgacaggtctatggccacaacagtaagccccacgcatgatatacctgaccagttgcatggaggagtttctagctcaaaccagttgtggaggaagccttttccaacagcgattgctttcctcagagcaaataaattcttgatatcggattccgccaaagcagtgatagggatgaagcagagaagtagagtgaacaagcaaacgtgatactggaaaaaggaaagggagagttacaatgaaaggcatcgttattcaggtaacaaaatcaataacaataccaacagctgaaggaaagaattataacacttgacttatgttcaaggttctaatttgcaaatgctcagcaattacaggtagactatgatacagtgaatttgagatgcacttgataatgcagcgcaaaggatgtgtggttttaaccccaaaatcccgtgttcaatccccaacacgctcacaatttcttatttaattgttggaggaacgcctctccctccaaatctcgttttttatgatacagtgaatttgatgtgtatggtataggcatagctgatactatgaatcttatattttgagatatagtattgttttctactcaaggctatgtatttgggggctgtccagcttatacatatttttagatagaagaatctagcttatgcatatctgctcaacaaatgaagtaaatgtaatagcaaagctaaagaaatgcagtacatatgtctaataaaaattcaatataaatatgaataaactaatgatattttcacatgcaaactaactagataaacaaaaaaaacatcattgttcaggcagcagagttcttgacagcccagaacatcgacccaatgcaatgaagtgtccaggcaaacagctgaaagaaagaacttaaaccaagtacctgtcgaaccattgctcgttcttcttctcaaaaaccgtggcaccgtgctagttatgcagattgcccaacttcagtaatctgaaatggtagtctttgagaaataaatcctgcaacaagaaaaaggcagcacctgtcagctactcagttttctggaaccgtcgactacatacaactacaagaaaataagaaatgattagcaaacaagcctaatattttctttgtcaatttgtcaagagtgccaacatttcaaaagcagatggcaacatattcaagaaagaaaggaccaatccacacttcaatcgacatcacacggcacaaactcaaaaccgcaagttaatatattcaagtcccacagaataatcctttgtaaaactagtaaaattatcccaactccagacgaaacaactttcaattgctgaagaactgagacaaatgttaaattaagtctgttttttttttctgctgtaaactgtgacatttcttttaatggaaatggagggttaaggccctttgataaaaaaaaaaagttaaattaattaccaacatgaaactttctactagaacaatagtatttttgcaagtctcttttccctttcctatgtatagcctttctatccaccgggcactggctgaagcatatgtgttcgtatccctgagatttatttatcgccctttggttttacaaattttatcggttcctagaccctcgttggcttataagcagcaaccaaatttaaatcccatgagatatataattaatttaaggttttcgtaattttccatttttaactttagttttgggccgctaagaatctatactccttataaaagagagccttataaaagagagcaatgttgccacctcaccaagtttttttttatttaccgactaccccatcatgttttcttccaattactctacgtgctttaatgttataaaataatccttctacatatgattctatcttatttcatctagaatgaaattgtcccaaaaaccttaatttgttttaatccgtataaaagcatgattatttagctagtagaaatataaggtccatactctatagtctatagttatttatcgccgcttgtacacatgtctttgtcttataagccgctactcgcattaaacgagagatatattaaaaaactactaaccgaaacgtaattacttgtccgatagtagaattgacttgcgcttagtaattacgtttcggatagtagtacaactactccaactttaaagtttaataaactccaaaactgcacgcttgtactgctatggtcgtagtagagcaagtataatagtagactataagccggctaaatattgaggtggaggagaaaagagaggagagagaggagaagcgggctataaacttacagccggcttagacacaggaaccaagaaactctacgagagagacatgtgagtcctgtattaattgtaaggagctagctattatatgggtaggctaagagaatgctacacagaaccttatgaccaacaagtcggctgtattattagtcttgctcgtagtagaagtaaatgtacgtgacccgaggccgcacgaccgaatcgaaaccaatcaaccaaacgagcgggtcggaattcgggggagaaagaaatggatcgtgcttaccaaaaccgcgtcccggtctcgcggcggcgccggcagccggacgtagcagccgccgccgcctaccgcagcagggggatcccgcggcgcctgcgtgggctcgccggagcggacgcgcaggaacaggacgacacagatcgatgcgcgattacgatccgtacctgatttggtttgatccccccaccgccaccccacaatgcggttgccggcgaacggagcacgaagaccggtggcgcgggcggaggcgtgaggtgcaatcaacgccggcgagggcgagcgggaggcgatcgagagcatgggagccat
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| CDS seq | atggctcccatgctctcgatcgcctcccgctcgccctcgccggcgttgattgcacctcacgcctccgcccgcgccaccggtcttcgtgctccgttcgccggcaaccgcattgtggggtggcggtggggggatcaaaccaaatcaggtacggatcgtaatcgcgcatcgatctgtgtcgtcctgttcctgcgcgtccgctccggcgagcccacgcaggcgccgcgggatccccctgctgcggtaggcggcggcggctgctacgtccggctgccggcgccgccgcgagaccgggacgcggttttgtatcacgtttgcttgttcactctacttctctgcttcatccctatcactgctttggcggaatccgatatcaagaatttatttgctctgaggaaagcaatcgctgttggaaaaggcttcctccacaactggtttgagctagaaactcctccatgcaactggtcaggtatatcatgcgtggggcttactgttgtggccatagacctgtcatctacgccactctacgtcgattttccatcacagatcattgcattccagtcactcgttcggctcaatgtaagcgggtgcgggttttccggtgagcttccagaagccatggtgaatctgcagcatctccagcacctagatttgagtgataatcagcttggtggccctctacctgcctcattatttgacttgaagatgctgaaagttatggtgcttgacaacaacatgttctctggacaactaagccctgccattgctcaccttcagcagctcaccgtgctatccatatccacgaattccttctctggaggcctccctccagagctaggcagtctgaagaacctggagtacctcgacattcacacaaatgcatttagtggatcaataccggcatctttcagtaatctatctcggctcttgtaccttgatgcaaacaataacaatctcaccggatcaatattcccgggaataagagcgttagtcaaccttgtcaagctcgatttatcgtcaaatggtttggtgggggcaatccccaaggagctttgtcaactgaaaaatctgcaaagtttaatcctatcagacaatgagttaactggaagcatcccagaagagattggtaatctgaagcagcttgaagtactcaatctcctcaaatgcaatctcatggacaccgtccctttgtcgatcggcaatctcgaaatcttggaagggctttatatatcattcaacagcttcagtggtgagcttccagcatctgttggtgagctacgcaatctgaggcagctgatggcgaagagtgcagggttcactgggagcataccgaaagaactcggcaattgcaagaagcttactactctagttctgtccggcaataacttcactggcactatacctgaagaacttgcagatttagttgccgttgtcttgtttgatgtggaaggaaacagactctcaggccacattcctgattggattcagaactggagtaatgtttcatctatatcgcttgcgcagaacatgttcgacggacctctaccgggtcttccattacatctggttagtttctctgcagaatccaaccagctgtcaggatctatccctgccaagatatgtcaaggcacctttctgcagatacttagattgaatgataacaatctgaccgggagtatcgatgagacatttaagggatgcaagaaccttactgagctaagcttgctagataaccatctccacggagagataccagaatacttagctttgctaccactggtgtcacttgatttgtcacataacaatttcacagggatgatccctgacaggttatgggaatcatcaaccatcttggacatctctctcagtgataaccagctaactggcatgatcacagagagcattggtaagctcttgagcttgcaatcgttgagcatcgacagaaactacttgcaaggacctctccctcgatcgatcggcgctctaaggaatctgacagcactgtctctcagtggcaacatgttatctgaggacattccaatacagctcttcaactgcagaaaccttgtcacattggacttgagctgtaacaatctgacagggcacatccccaaggccatatctcacttgacaaagctcaacaccttggtcctgtcccggaatcggctgtcaggcgctatcccttctgagctatgcgtggctttctcgcgcgagtcccattctgaattggagtacgtgcaacacattggattgattgatctgtcgcggaacagattgactggtcacatcccgagagcaatcaacaattgttctatactggtagagctacacctgcaagacaacttgttaagtggcactatacctgtggaacttgctgagctgagaaacataacaaccattgatctatcttccaatgcattggttggacctgtccttccatggcctgtaccattggcaagcctccaaggccttcttctgtctaacaacagactcagtggctccattccttctggcattggcaacattcttccccagatcacaatgctggacttatcgggtaacgcgcttaccggcactcttccattggatctactctgcaaagagagcctaaaccacctggatgtcagtgacaacaacatctctggacaaatcccattttcctgtcatgaggacaaagaatccccaatcccactgatcttcttcaatgcaagcagcaaccatttctcagggagcctggatgaatcgatctccaacttcacaaagctgacctatcttgatctccacaacaacagcctcactggaagattgccatcagcaatagcaagggtcacttctttgtactatcttgacctatcaagcaatgatttcagtggcaccatcccttgtggtatctgcggtatgtttggcctgaccttcgcaaacttctccggtaaccgcgacggtggcactttcaccttggcagattgtgctgctgaagaaggcggggtttgcgccgctaaccgtgtcgatcgaaagatgccggatcatccgttccatgtactggaagcaaccatttgttgcattgcaacggccattgtcattgtgctggtggtgatcctggtggtttatctgagacgacggaggaagatgttgagaaggaggcagtttgtccttgtccctgccggtgacaacgccatggctgaccatgagacaaccttgagtgacaatcttttggggaggaggaggatgaagaagagggagccaccgagcatcaacctcgcgacgttcgagcacgcgcctgtgagggtcaccgtggacgagatcatgagagccaccgggaatttcgacgggatgcacgtcgtcggcgacggcggcttcggcaccgtgtacagggcggagctccccggcggccggagggtcgccgtcaagaggctccacggcgtcggccgccggttccagggcggcgaacgcgagttccgcgctgagatggagaccgtcggcaaggtgaggcaccccaacctcgtccccctcctcggctactgcgccgccggcgacgagcggttcctcgtctacgagtacatggagcacggcagcctggaggaccggctgcgcggcggcggcggcgcggcgctcgggtggccggagcggctcacgatctgcggcggcgccgcccgcgggctcgcgttcctgcaccacggcttcgtgccgcacgtcatccaccgcgacgtcaagtccagcaacgttctcctaggcgagggcctccagccgcgggtgtccgacttcggcctcgcgcggatcatcagcgcgtgcgagacccacgtcagcaccgtcctcgccggcacgctcggctacatcccgccggagtacgcgctggcgatgcagtgcaccgccaagggcgacgtgtacagcttcggcgtcgtcatgctggagctgctcacggggcggccgccgacgtggtcgtcggcggaggtgacggcggagggcgacgacgaacgcggcggcggcgggagcctcgtcgggtgggtgcggtggatggcggcgcgcgggcgtggcggcgaggtgttcgacgcttgcctgccggtgtccggcgcggagcgggagcagatggcgcgggtgctcgacgtcgcccgcgactgcaccgccgacgagccgtggaggaggccgaccatggcggaggtggccaggagggtgggggcgatcgaggcgatggagtacgggcctctggtggtggcagtgtccagtggcgagccgccggcgatgccatga
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| Protein seq | MAPMLSIASRSPSPALIAPHASARATGLRAPFAGNRIVGWRWGDQTKSGTDRNRASICVVLFLRVRSGEPTQAPRDPPAAVGGGGCYVRLPAPPRDRDAVLYHVCLFTLLLCFIPITALAESDIKNLFALRKAIAVGKGFLHNWFELETPPCNWSGISCVGLTVVAIDLSSTPLYVDFPSQIIAFQSLVRLNVSGCGFSGELPEAMVNLQHLQHLDLSDNQLGGPLPASLFDLKMLKVMVLDNNMFSGQLSPAIAHLQQLTVLSISTNSFSGGLPPELGSLKNLEYLDIHTNAFSGSIPASFSNLSRLLYLDANNNNLTGSIFPGIRALVNLVKLDLSSNGLVGAIPKELCQLKNLQSLILSDNELTGSIPEEIGNLKQLEVLNLLKCNLMDTVPLSIGNLEILEGLYISFNSFSGELPASVGELRNLRQLMAKSAGFTGSIPKELGNCKKLTTLVLSGNNFTGTIPEELADLVAVVLFDVEGNRLSGHIPDWIQNWSNVSSISLAQNMFDGPLPGLPLHLVSFSAESNQLSGSIPAKICQGTFLQILRLNDNNLTGSIDETFKGCKNLTELSLLDNHLHGEIPEYLALLPLVSLDLSHNNFTGMIPDRLWESSTILDISLSDNQLTGMITESIGKLLSLQSLSIDRNYLQGPLPRSIGALRNLTALSLSGNMLSEDIPIQLFNCRNLVTLDLSCNNLTGHIPKAISHLTKLNTLVLSRNRLSGAIPSELCVAFSRESHSELEYVQHIGLIDLSRNRLTGHIPRAINNCSILVELHLQDNLLSGTIPVELAELRNITTIDLSSNALVGPVLPWPVPLASLQGLLLSNNRLSGSIPSGIGNILPQITMLDLSGNALTGTLPLDLLCKESLNHLDVSDNNISGQIPFSCHEDKESPIPLIFFNASSNHFSGSLDESISNFTKLTYLDLHNNSLTGRLPSAIARVTSLYYLDLSSNDFSGTIPCGICGMFGLTFANFSGNRDGGTFTLADCAAEEGGVCAANRVDRKMPDHPFHVLEATICCIATAIVIVLVVILVVYLRRRRKMLRRRQFVLVPAGDNAMADHETTLSDNLLGRRRMKKREPPSINLATFEHAPVRVTVDEIMRATGNFDGMHVVGDGGFGTVYRAELPGGRRVAVKRLHGVGRRFQGGEREFRAEMETVGKVRHPNLVPLLGYCAAGDERFLVYEYMEHGSLEDRLRGGGGAALGWPERLTICGGAARGLAFLHHGFVPHVIHRDVKSSNVLLGEGLQPRVSDFGLARIISACETHVSTVLAGTLGYIPPEYALAMQCTAKGDVYSFGVVMLELLTGRPPTWSSAEVTAEGDDERGGGGSLVGWVRWMAARGRGGEVFDACLPVSGAEREQMARVLDVARDCTADEPWRRPTMAEVARRVGAIEAMEYGPLVVAVSSGEPPAMP |
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| Function | Leucine-rich repeat receptor protein kinase MSL1 [UniProtKB/Swiss-Prot:Q7F8Q9] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_02g0007460 | OsLima_02g0007460.01 | Chr02 | 5397777 | 5404479 | - | NAM | ||
| CDS seq | atggctcccatgctctcgatcgcctcccgctcgccctcgccggcgttgattgcacctcacgcctccgcccgcgccaccggtcttcgtgctccgttcgccggcaaccgcattgtggggtggcggtggggggatcaaaccaaatcaggtacggatcgtaatcgcgcatcgatctgtgtcgtcctgttcctgcgcgtccgctccggcgagcccacgcaggcgccgcgggatccccctgctgcggtaggcggcggcggctgctacgtccggctgccggcgccgccgcgagaccgggacgcggttttgtatcacgtttgcttgttcactctacttctctgcttcatccctatcactgctttggcggaatccgatatcaagaatttatttgctctgaggaaagcaatcgctgttggaaaaggcttcctccacaactggtttgagctagaaactcctccatgcaactggtcaggtatatcatgcgtggggcttactgttgtggccatagacctgtcatctacgccactctacgtcgattttccatcacagatcattgcattccagtcactcgttcggctcaatgtaagcgggtgcgggttttccggtgagcttccagaagccatggtgaatctgcagcatctccagcacctagatttgagtgataatcagcttggtggccctctacctgcctcattatttgacttgaagatgctgaaagttatggtgcttgacaacaacatgttctctggacaactaagccctgccattgctcaccttcagcagctcaccgtgctatccatatccacgaattccttctctggaggcctccctccagagctaggcagtctgaagaacctggagtacctcgacattcacacaaatgcatttagtggatcaataccggcatctttcagtaatctatctcggctcttgtaccttgatgcaaacaataacaatctcaccggatcaatattcccgggaataagagcgttagtcaaccttgtcaagctcgatttatcgtcaaatggtttggtgggggcaatccccaaggagctttgtcaactgaaaaatctgcaaagtttaatcctatcagacaatgagttaactggaagcatcccagaagagattggtaatctgaagcagcttgaagtactcaatctcctcaaatgcaatctcatggacaccgtccctttgtcgatcggcaatctcgaaatcttggaagggctttatatatcattcaacagcttcagtggtgagcttccagcatctgttggtgagctacgcaatctgaggcagctgatggcgaagagtgcagggttcactgggagcataccgaaagaactcggcaattgcaagaagcttactactctagttctgtccggcaataacttcactggcactatacctgaagaacttgcagatttagttgccgttgtcttgtttgatgtggaaggaaacagactctcaggccacattcctgattggattcagaactggagtaatgtttcatctatatcgcttgcgcagaacatgttcgacggacctctaccgggtcttccattacatctggttagtttctctgcagaatccaaccagctgtcaggatctatccctgccaagatatgtcaaggcacctttctgcagatacttagattgaatgataacaatctgaccgggagtatcgatgagacatttaagggatgcaagaaccttactgagctaagcttgctagataaccatctccacggagagataccagaatacttagctttgctaccactggtgtcacttgatttgtcacataacaatttcacagggatgatccctgacaggttatgggaatcatcaaccatcttggacatctctctcagtgataaccagctaactggcatgatcacagagagcattggtaagctcttgagcttgcaatcgttgagcatcgacagaaactacttgcaaggacctctccctcgatcgatcggcgctctaaggaatctgacagcactgtctctcagtggcaacatgttatctgaggacattccaatacagctcttcaactgcagaaaccttgtcacattggacttgagctgtaacaatctgacagggcacatccccaaggccatatctcacttgacaaagctcaacaccttggtcctgtcccggaatcggctgtcaggcgctatcccttctgagctatgcgtggctttctcgcgcgagtcccattctgaattggagtacgtgcaacacattggattgattgatctgtcgcggaacagattgactggtcacatcccgagagcaatcaacaattgttctatactggtagagctacacctgcaagacaacttgttaagtggcactatacctgtggaacttgctgagctgagaaacataacaaccattgatctatcttccaatgcattggttggacctgtccttccatggcctgtaccattggcaagcctccaaggccttcttctgtctaacaacagactcagtggctccattccttctggcattggcaacattcttccccagatcacaatgctggacttatcgggtaacgcgcttaccggcactcttccattggatctactctgcaaagagagcctaaaccacctggatgtcagtgacaacaacatctctggacaaatcccattttcctgtcatgaggacaaagaatccccaatcccactgatcttcttcaatgcaagcagcaaccatttctcagggagcctggatgaatcgatctccaacttcacaaagctgacctatcttgatctccacaacaacagcctcactggaagattgccatcagcaatagcaagggtcacttctttgtactatcttgacctatcaagcaatgatttcagtggcaccatcccttgtggtatctgcggtatgtttggcctgaccttcgcaaacttctccggtaaccgcgacggtggcactttcaccttggcagattgtgctgctgaagaaggcggggtttgcgccgctaaccgtgtcgatcgaaagatgccggatcatccgttccatgtactggaagcaaccatttgttgcattgcaacggccattgtcattgtgctggtggtgatcctggtggtttatctgagacgacggaggaagatgttgagaaggaggcagtttgtccttgtccctgccggtgacaacgccatggctgaccatgagacaaccttgagtgacaatcttttggggaggaggaggatgaagaagagggagccaccgagcatcaacctcgcgacgttcgagcacgcgcctgtgagggtcaccgtggacgagatcatgagagccaccgggaatttcgacgggatgcacgtcgtcggcgacggcggcttcggcaccgtgtacagggcggagctccccggcggccggagggtcgccgtcaagaggctccacggcgtcggccgccggttccagggcggcgaacgcgagttccgcgctgagatggagaccgtcggcaaggtgaggcaccccaacctcgtccccctcctcggctactgcgccgccggcgacgagcggttcctcgtctacgagtacatggagcacggcagcctggaggaccggctgcgcggcggcggcggcgcggcgctcgggtggccggagcggctcacgatctgcggcggcgccgcccgcgggctcgcgttcctgcaccacggcttcgtgccgcacgtcatccaccgcgacgtcaagtccagcaacgttctcctaggcgagggcctccagccgcgggtgtccgacttcggcctcgcgcggatcatcagcgcgtgcgagacccacgtcagcaccgtcctcgccggcacgctcggctacatcccgccggagtacgcgctggcgatgcagtgcaccgccaagggcgacgtgtacagcttcggcgtcgtcatgctggagctgctcacggggcggccgccgacgtggtcgtcggcggaggtgacggcggagggcgacgacgaacgcggcggcggcgggagcctcgtcgggtgggtgcggtggatggcggcgcgcgggcgtggcggcgaggtgttcgacgcttgcctgccggtgtccggcgcggagcgggagcagatggcgcgggtgctcgacgtcgcccgcgactgcaccgccgacgagccgtggaggaggccgaccatggcggaggtggccaggagggtgggggcgatcgaggcgatggagtacgggcctctggtggtggcagtgtccagtggcgagccgccggcgatgccatga
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| Protein seq | MAPMLSIASRSPSPALIAPHASARATGLRAPFAGNRIVGWRWGDQTKSGTDRNRASICVVLFLRVRSGEPTQAPRDPPAAVGGGGCYVRLPAPPRDRDAVLYHVCLFTLLLCFIPITALAESDIKNLFALRKAIAVGKGFLHNWFELETPPCNWSGISCVGLTVVAIDLSSTPLYVDFPSQIIAFQSLVRLNVSGCGFSGELPEAMVNLQHLQHLDLSDNQLGGPLPASLFDLKMLKVMVLDNNMFSGQLSPAIAHLQQLTVLSISTNSFSGGLPPELGSLKNLEYLDIHTNAFSGSIPASFSNLSRLLYLDANNNNLTGSIFPGIRALVNLVKLDLSSNGLVGAIPKELCQLKNLQSLILSDNELTGSIPEEIGNLKQLEVLNLLKCNLMDTVPLSIGNLEILEGLYISFNSFSGELPASVGELRNLRQLMAKSAGFTGSIPKELGNCKKLTTLVLSGNNFTGTIPEELADLVAVVLFDVEGNRLSGHIPDWIQNWSNVSSISLAQNMFDGPLPGLPLHLVSFSAESNQLSGSIPAKICQGTFLQILRLNDNNLTGSIDETFKGCKNLTELSLLDNHLHGEIPEYLALLPLVSLDLSHNNFTGMIPDRLWESSTILDISLSDNQLTGMITESIGKLLSLQSLSIDRNYLQGPLPRSIGALRNLTALSLSGNMLSEDIPIQLFNCRNLVTLDLSCNNLTGHIPKAISHLTKLNTLVLSRNRLSGAIPSELCVAFSRESHSELEYVQHIGLIDLSRNRLTGHIPRAINNCSILVELHLQDNLLSGTIPVELAELRNITTIDLSSNALVGPVLPWPVPLASLQGLLLSNNRLSGSIPSGIGNILPQITMLDLSGNALTGTLPLDLLCKESLNHLDVSDNNISGQIPFSCHEDKESPIPLIFFNASSNHFSGSLDESISNFTKLTYLDLHNNSLTGRLPSAIARVTSLYYLDLSSNDFSGTIPCGICGMFGLTFANFSGNRDGGTFTLADCAAEEGGVCAANRVDRKMPDHPFHVLEATICCIATAIVIVLVVILVVYLRRRRKMLRRRQFVLVPAGDNAMADHETTLSDNLLGRRRMKKREPPSINLATFEHAPVRVTVDEIMRATGNFDGMHVVGDGGFGTVYRAELPGGRRVAVKRLHGVGRRFQGGEREFRAEMETVGKVRHPNLVPLLGYCAAGDERFLVYEYMEHGSLEDRLRGGGGAALGWPERLTICGGAARGLAFLHHGFVPHVIHRDVKSSNVLLGEGLQPRVSDFGLARIISACETHVSTVLAGTLGYIPPEYALAMQCTAKGDVYSFGVVMLELLTGRPPTWSSAEVTAEGDDERGGGGSLVGWVRWMAARGRGGEVFDACLPVSGAEREQMARVLDVARDCTADEPWRRPTMAEVARRVGAIEAMEYGPLVVAVSSGEPPAMP
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0194400 | RBH | 0.087757 | 0.000000 | 0.543232 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g10100 | RBH | 0.037738 | 0.000000 | 0.139743 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0194400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0007130 | RBH | 0.0 | 0.0 | 0.434703 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0007300 | RBH | 0.0 | 0.000000 | 0.145706 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0007070 | RBH | 0.0 | 0.0 | 0.302881 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0007020 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0007100 | RBH | 0.238977 | 0.0 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0088300 | RBH | 0.009438 | 0.1088225 | 0.107194 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0007030 | RBH | 0.0 | 0.0 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0091300 | RBH | 0.01038 | 0.0831445 | 0.406505 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0007070 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0007340 | RBH | 0.000000 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0007330 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0007090 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G007190 | RBH | 0.0 | 0.0 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0007160 | RBH | 0.0 | 0.0 | 0.0 |
