Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_01g0035940 | OGI:01101990 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr01:35529522-35530741 | ||||||||
| Gene Symbol | CYP94D9, OsCYP94D9, CYP94D7, OsCYP94D7 | ||||||||||
| DNA seq | atggaattctcctcgagttcaacctctctcttcctcctcctctctatcctgcctctcctctactttctttgccagcgcaacgaccccaagaagcagcctcacgcccatgggctcaagtcctaccccgtcgtcggcatagtgccgcacttcaccaagaacaaggaccgcttccttgagtttacaaccgaaatcatgaagcggagccccacgcaaaccatgtcgttcaaggcgctaggtctcaccggcggcggcgtcatcaccgccaacccggccaatgtcaagtatacgctgaagactaacttcggtaactaCcccaagggcgagctcgccgtgtccatggtcgtggacttcctcggccatggcatcttcaactccgacggcgagcagtggcagtggcagcggaaggccgccagctacgagttcaacaagcgctcgctgaggaacttcgtggtggacaccgtcaggtccgaggtcgtcgagaggctgctgccgcttctggagcgggcggagcgcgacggccggacgctggatgtgcaggacgtgctggagcgcttcgcgttcgacaacatctgccaagtcgccttcgacgaggacccggcttgcctcgccgaggacagcatggctcgccccagagcgcggagttcatgcgcgcgttcaacgatgcgcagattgccgtgagggaccggttcatgtcgccggtcaagtcgctgtggcgcttcaagaggctgttcaacatggagcccgagaggcgaatgcgggaggcgctcgccacgatccacggcttcgccgagcggatcgtccgggagcgcagggagagagggaaggccggactggcgcgcagtgacgacttcctctcgcgcttcgccgcgagcggcgagcacagcgacgagagcctccgcgacgtggtcacaaacttcctcctcgccgggcgcgacacgacgtcgtcggcgttgacctggttcttctgggtactgtccggtcggcccgacgtggaggacaagatcgtacgcgagatccacgcggtgcggcgcgcgtccggtagcacaagcgacgcgacgttcagctttgatgagctgcgtgacatgcaatacctccatgccgccatcacggagtctatgcggctgtacccacccgtggccatggacacgcacagctgcaaggaggacgacttcctgccggatggcacgttcgtggggaaagggtggctagtgacgtactga
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| CDS seq | atggaattctcctcgagttcaacctctctcttcctcctcctctctatcctgcctctcctctactttctttgccagcgcaacgaccccaagaagcagcctcacgcccatgggctcaagtcctaccccgtcgtcggcatagtgccgcacttcaccaagaacaaggaccgcttccttgagtttacaaccgaaatcatgaagcggagccccacgcaaaccatgtcgttcaaggcgctaggtctcaccggcggcggcgtcatcaccgccaacccggccaatgtcaagtatacgctgaagactaacttcggtaactaCcccaagggcgagctcgccgtgtccatggtcgtggacttcctcggccatggcatcttcaactccgacggcgagcagtggcagtggcagcggaaggccgccagctacgagttcaacaagcgctcgctgaggaacttcgtggtggacaccgtcaggtccgaggtcgtcgagaggctgctgccgcttctggagcgggcggagcgcgacggccggacgctggatgtgcaggacgtgctggagcgcttcgcgttcgacaacatctgccaaattgccgtgagggaccggttcatgtcgccggtcaagtcgctgtggcgcttcaagaggctgttcaacatggagcccgagaggcgaatgcgggaggcgctcgccacgatccacggcttcgccgagcggatcgtccgggagcgcagggagagagggaaggccggactggcgcgcagtgacgacttcctctcgcgcttcgccgcgagcggcgagcacagcgacgagagcctccgcgacgtggtcacaaacttcctcctcgccgggcgcgacacgacgtcgtcggcgttgacctggttcttctgggtactgtccggtcggcccgacgtggaggacaagatcgtacgcgagatccacgcggtgcggcgcgcgtccggtagcacaagcgacgcgacgttcagctttgatgagctgcgtgacatgcaatacctccatgccgccatcacggagtctatgcggctgtacccacccgtggccatggacacgcacagctgcaaggaggacgacttcctgccggatggcacgttcgtggggaaagggtggctagtgacgtactga
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| Protein seq | MEFSSSSTSLFLLLSILPLLYFLCQRNDPKKQPHAHGLKSYPVVGIVPHFTKNKDRFLEFTTEIMKRSPTQTMSFKALGLTGGGVITANPANVKYTLKTNFGNYPKGELAVSMVVDFLGHGIFNSDGEQWQWQRKAASYEFNKRSLRNFVVDTVRSEVVERLLPLLERAERDGRTLDVQDVLERFAFDNICQIAVRDRFMSPVKSLWRFKRLFNMEPERRMREALATIHGFAERIVRERRERGKAGLARSDDFLSRFAASGEHSDESLRDVVTNFLLAGRDTTSSALTWFFWVLSGRPDVEDKIVREIHAVRRASGSTSDATFSFDELRDMQYLHAAITESMRLYPPVAMDTHSCKEDDFLPDGTFVGKGWLVTY |
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| Function | Cytochrome P450 94A1 [UniProtKB/Swiss-Prot:O81117] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_01g0035940 | OsLima_01g0035940.01 | Chr01 | 35529522 | 35530741 | + | NAM | ||
| CDS seq | atggaattctcctcgagttcaacctctctcttcctcctcctctctatcctgcctctcctctactttctttgccagcgcaacgaccccaagaagcagcctcacgcccatgggctcaagtcctaccccgtcgtcggcatagtgccgcacttcaccaagaacaaggaccgcttccttgagtttacaaccgaaatcatgaagcggagccccacgcaaaccatgtcgttcaaggcgctaggtctcaccggcggcggcgtcatcaccgccaacccggccaatgtcaagtatacgctgaagactaacttcggtaactaCcccaagggcgagctcgccgtgtccatggtcgtggacttcctcggccatggcatcttcaactccgacggcgagcagtggcagtggcagcggaaggccgccagctacgagttcaacaagcgctcgctgaggaacttcgtggtggacaccgtcaggtccgaggtcgtcgagaggctgctgccgcttctggagcgggcggagcgcgacggccggacgctggatgtgcaggacgtgctggagcgcttcgcgttcgacaacatctgccaaattgccgtgagggaccggttcatgtcgccggtcaagtcgctgtggcgcttcaagaggctgttcaacatggagcccgagaggcgaatgcgggaggcgctcgccacgatccacggcttcgccgagcggatcgtccgggagcgcagggagagagggaaggccggactggcgcgcagtgacgacttcctctcgcgcttcgccgcgagcggcgagcacagcgacgagagcctccgcgacgtggtcacaaacttcctcctcgccgggcgcgacacgacgtcgtcggcgttgacctggttcttctgggtactgtccggtcggcccgacgtggaggacaagatcgtacgcgagatccacgcggtgcggcgcgcgtccggtagcacaagcgacgcgacgttcagctttgatgagctgcgtgacatgcaatacctccatgccgccatcacggagtctatgcggctgtacccacccgtggccatggacacgcacagctgcaaggaggacgacttcctgccggatggcacgttcgtggggaaagggtggctagtgacgtactga
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| Protein seq | MEFSSSSTSLFLLLSILPLLYFLCQRNDPKKQPHAHGLKSYPVVGIVPHFTKNKDRFLEFTTEIMKRSPTQTMSFKALGLTGGGVITANPANVKYTLKTNFGNYPKGELAVSMVVDFLGHGIFNSDGEQWQWQRKAASYEFNKRSLRNFVVDTVRSEVVERLLPLLERAERDGRTLDVQDVLERFAFDNICQIAVRDRFMSPVKSLWRFKRLFNMEPERRMREALATIHGFAERIVRERRERGKAGLARSDDFLSRFAASGEHSDESLRDVVTNFLLAGRDTTSSALTWFFWVLSGRPDVEDKIVREIHAVRRASGSTSDATFSFDELRDMQYLHAAITESMRLYPPVAMDTHSCKEDDFLPDGTFVGKGWLVTY
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0804400 | SBH | 1.926220 | 1.424884 | 2.510362 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g58950 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0803800 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0037200 | SBH | 0.630812 | 0.0 | 1.746311 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0036660 | SBH | 0.072172 | 1.759632 | 1.170231 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0037060 | SBH | 0.200988 | 2.879822 | 1.085139 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0036480 | SBH | 0.021936 | 0.009421 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0036090 | RBH | 0.0 | 0.0 | 0.670674 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0562900 | SBH | 0.523393 | 0.2575655 | 0.040303 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0035830 | RBH | 0.0 | 0.718195 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0560700 | SBH | 0.010658 | 0.05154 | 0.01618 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0018810 | SBH | 0.232979 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0036020 | SBH | 0.0 | 0.364335 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0036260 | RBH | 0.0 | 1.372951 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0036320 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0036110 | SBH | 0.0 | 0.664972 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G036610 | RBH | 0.826504 | 0.0 | 0.449362 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0036330 | RBH | 0.0 | 15.221929 | 0.147255 |
