Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_01g0025470 | OGI:01078670 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr01:27001711-27009880 | ||||||||
| Gene Symbol | ZHD5, OsZHD5 | ||||||||||
| DNA seq | cccacctattggtcttaaaatggacttttttctatctataagaagaatctaatccaacctatattgcatctaccgtaccaattattcagtaattaaaaggtcagaagaagaataataatttgattagtacaagaataggaaaagaacatcaaatggcaggaaggaggggggctctaccttccccgctcgtttcgatcgaacctttgtctcctcccatacatggcatcctgcctactgctgctgttcctgcctgttctcctgctgctgtttctgcttgaagctatgcttgttgttgtgcatccacaccttgagcgcttgcctccggacgccgacctgcgcgcagaagtgctccaccgtcgcctcctcctgccgctggatcctccaccccacgcgctccgcgaacgccagcatctgctccttctgctcccgcgtgaacgtcgtgcgtgaccgcctccgtggctgcaccggcgagggccgcagccgctcgtcgctggaggacgcggtcgtggtgccagtgccgccgctgggcgtgccgtagccagggaacggcaaaccttgcttgctggcggccgctgcaggcggcagcagcagcgcgggtggtgcgcgcgagttgatggacgccggcaggtgcagctgcagcagccgtgctgcgcccgcgcggcccggggaagggtcccggcggtggaagctgcggtggcagccgcaggccgcgcaggcgagcggctcctcggtggacgccggcatgaactcgccgcagccatccacgacgtggccgcccgaggccgccgcgtggttccggaggcactcgtggtaccggcacctgatcgtctcgggggcggccgacgtcagcacgcggtgaggcggcgtgggcggggatgagcagccaccgcccacgtcgccggcgtcctcctcgtgctcgctgagctccatgccagccacgtacgtgcagtgtgcaaagctagctagcgttgcttgccgcggcgggctcggtgggggaatagcgtgtaatacgtggtcgtcgaggtggggatgcgtgtgatcatgtcggggatatttttgggtgcgggcagcaggtcaggctggcgatgccggggtcaggtttgcaacggcgaccggccgcgtcggcgtgtatgctgtttcccgcggccggtgctgaccaccgacagcggcagacttcgcgcacactcgatcttgctgggccgtggtttgcttactcagtaaacggctgacaacgctcctggcttctcaccgcttcaggttgattgagcacctccctgtgggtatgtagcgattgctctagactacttccattcggtttctcaccgatctataacgttggagttcaaacattgtaaggcgtgtttgcgtgcttggtttagccttttgttggcataccggtggtacgacggtgaaatcatatacctgattctatcaatcaagggctaaatccttatgatcttaaaaggtgggttttcaataagatttgagtgaggcgttacaaatttagaattttagtgaggtcatctgtgggtctttgaattcgtctctttgagtgtgtgtcaagaggtgcattcgctgtgcatgagtgtgatgtgcgtgtgtgacttttgtgtaattaaaagttttaactaattttgagtttgatatttttatttcaagaataattttaagtataacttttatttgtccttttagctcatgaagaacaaagttgtccaacaaaagcaaaaaaaaaaaaaaaaccctaaaaataattagataatcaataataagctttagctttttgaaagtatatatatctagcctacttatctaactttgtcaatgttgttagtataacatgttactacatggtgtggaaacactaagagttaaggcacgacgttgtatcttattggcaaaaagtaaacaaaaccacaaaaacatcaaatataaaatggtgatgcttatcatcaaaatcaacatgtcaggttacatgcatagccaacatttattcattggcttatgtcgtcaaggagagccttatcatgccataagatctccagactaaaaatatagaaaaaaaatcatatagttactgaatgtgttaaaaaaaacatctcaaacgtttgtaatgagcatatcgattttcgtataatgggcttcttctttagaattcctctttaatttgccgaaccatattccttatttgtgctagcttcagccgatttgcttttttcttcctcaacaccattgttttccttaccagaagcacctatgccaacattactaccaacatttgcattgcccccaattcctccgtgaaatccaatgttcattccagtgtgtactcctacaccggcaccgataccagcaccaacactcttcgatgcactagctccagcacctatgttagaaccttcggatccactaatagcggcgttagcatttgcgtgtgccttggctgatgcatggaaatggaaactaccaccagctccaaaaccaaaaccaatatgcttgctagcaccaataccaacgttagcaccagcattagcattagcattagcatttgctccagcttgtcctccaacagcacctccacctccactagcattagcatcagcattagcttttgcatcaccaccaacacccccatttgctccaataccaccaccaactttagcacctcctgagatactggcaccaataccgagattagcaccgacaccaacaccggcattagcattagcacctgcatttcctccgataccagcactgcttttatcctctttagagatactagcaccaattttatcgtctttagcgataccggcaccagcattgagaccagcatcagcattagctttcgcatcaacaccaacgccggcatttgctccaataccaccaccaactttagcacctcctgagataccggcaccaataccgataccaataccagcaccaacaccggcattaacattagcacctgcatttcctccaataccagcactgattttatcctctttagagataccggcaccggcattgagaccagcatcagcgttagcttttgcattaccaccaacaccggcatttgctccaatatcaccaccaactttagcacctcctgagagaccggcactgataccaacaccggcattagcgttagcacctgcatttcctccaacaccagcattgattttattctccttagagatactagcaccaatttttacgtctttagagatacccgcatcagcattgagaccagtatcagcattagctttcgcatcaccaccaacaccggcatttgctccaataccaccaccaactttagcacctcctgagataccgacgccaataccaagaccagcaccagcaccaataccagcattagcattaacacctgcatttcctccaataccggcactgatattatcttctttagagatattagcaccaattttagcgtctttagaaataccagcaccagcattgataccagcatcagcattagcttttgcatctccaccaacaccggcatttgctccaataccaccaccaactttagcacctcctgtgataccagcaccaatgccgagcccgacaccggcaccaacactggcattagcgttagcacctgcatttcctccaatacttgcattgattttatcctctttagaaataccaacatcaattttagcatctttagagatagcggcaccagcatccacattcgcttttgcatcaccaccaacatccgcctttgctccaatactaccaccaatcctagcaccaacaccagctttagcgtttgcgccgacgccagcattagcattagctttcgcatcaccaccaactccagcatttgctccgatgccaccaccaactttagcgcctcccgagataccaactccagcacctataccggcttttgcatttgcattcgcgtcagcaccaactccagccttcgctccgatatcagcgccaactttagctcctccagagatcccaacaccagcacctacaccggcttttgcctttgtatacgcgtcagcaccaactcccgccttcgctccaatgtcagcaccaactttagcgcctcccgagataccaacgccagcacctataccagcttttgcatttgcatttgcgtcagcaccaactccagccttcgctccgatatcagcgccaactttaacgcctcccgagataccaacaccagcacctataccagcttttgaattcgcgtcagcaccaactcccgccttcgctccaatatctgcgccaactttagcgcctcctgagataccagctccagcacctataccagcttttgcatttgcattcgcgtcagcaccaactccagccttcgctccgatatcagcgccaactttagcgcctcccgagataccaacaccagcacctataccagcttttgcattcgcgtcagcaccaactcccgccttcgctccaatatctgcgccaactttaacgcctcccgagataccagctccagcacctatgccatcttttgcatttgcattcgcgtcagcaccaactccagccttcactccgatatcagcgccaactttagcgcctcccgagataccaccaccagcacctataccagcttttgtactcgcgtcagcaccaactcccgccttcgctccaatatctgcgccaactttagcgccacccgagataccagctacatcacctataccagcttttgcatttgcattcgcgtcagcaccaactccagccttcgctccgatgtcagtgccaactttagcgcctcccgagatatcaacaccagcacctataccggcttttgcattcacgtcaccaccaactcccgcttttgctccaatgtcagcgccaactttagcgcctcccgagataccaactccagcacttataccggcttttgcatttgcattcgcatcagcaccaactcgcgcgttcgttccaatgccaccggcaactttagcgcctcctgagatcccaacatcagcaccgacaccggcttttgcctttgtatacacatcaccaccaactcccgccttcgctccaatatcagcgccaactttagcgcctcctgagataccaactccagcacctatactggcttttgcttttgcattcgcgtcagcaccaactcctgccttcgctacaatgtcagcgccaactttagcgcctccggagataccaactccagcacctataccggcttttgcattcgcgtcaccaccaactttcgccttcgctccgatgtcagcaccaactttagctcctcccgagataccaataccagcacctataccaacttttgcattcgcgtcaccagcaactcccgccttcgctccgatgtcagcaccaactttagcgcctcccgatataccaacaccagcacctataccggcttttgcaatcgcgccaccaccaacacccgccttcgctccaatatctgcgccaactttagcgcctcccgagataccagctccagcgcctataccagcttttgcatttgcattcgcgtcagcaccaactccagccttcgctccgatgtcagcgccaactttagcgcctcccgagataccaacaccagcacctataccggcttttgcatttgcattcgcgttagcaccaattccagccttcgctccgataccagcgccaactttagcatgtcccgagataccaactccagcacctataccggctttctcatttgcatttgcgtcagcaccaactccagccttcgctccgatttcagcgccaactttagctcctccagagatcccaacactagcaccgacaccggcttttgcctttgtatacgtgtaaccagcaactcccgccttcgctccaatgtcagtgccaactttagcgcctcccgagataccaacaccagcacctataccagcttttgcatttgcatttgcgtcagcaccaactccagcctttgctccgatatcaacgccaactttagcgcctcctgagataccaataccagcacctataccagcttttgcattcgcatcagcacctactcccgccttcgctccaatatctgcaccaactttagcgcctcctgagatgccagctccagcacctataccagcttttgcatttacattcgcgtcagcaccaactccagccttcgctccgatgtcagcgccaactttagcgcctcccgagataccaacaccagcacctataccggcttttgcattcacgtcaccaccaactcccgccttcgctccaatgtcagcgccaactttagcggctcccgagataccaactccagcacctataccggcttttgcatttgcattcgcatcagcaccaactcccgcgttcgctccgttgccactggcaactttagcgcctcctgagatcccaacaccagcaccgacaccggcttttgcctttgtatacgcatcaccaccaactcccgccttcgctccaatgtcagcgccaactttagcgcctcctgagataccaactccagcacctataccggcttttgcatttgcattcgcatcagcaccaactcccgccttcgctccaatgtcagcgccaactttagcgtctcctgagataccaactccagcacctataccagcttttgcattcacgtcaccaccaactcccgccttcgctccaatcttagcgccaactttagcgcctcccgagataccaacaccagcaccgacaccggcttttgcattggcgttaccaccaactcctgccttcgctccgatgtcagcgccaactttagcacctcccgagataccaacaccagcacctataccggcttttgcatttgcattcgcatcagcaccaactcccgccttcgctctaatgccaccagcaactttggcgcctccagatataccaataccagcacctacaccggcttttgcatttgtctgtgcatcaccgccaactccagcattcgctcctatgccagcagcaactttagcacccgcggagataccaaaaccagcactgataccagcttttgcttttccatggacattaccgttggcacctgcatattcttctgcgttgttgcctacattgccactgacacttttactcgctttagctccaaccccagcacttgcagctgcactagctttagcatgggcacttgcgctagcactaatatgaatatttgcatgtatacctccagatacatgaacccgagcaccaccagcaaaaCccccagcaattccagtagctactcctgccgctgccccaccagccactcctataaaggatggaaatgtcttgttatatttttatataagtaaatcctaactagcttaattgtgtttaatgggctatttttaatattccttttctgctacggtatatttataccttaaatattgattcattacatcattgatattagtattacctgctgcaacctcagccatcttagccatgctggttgccatgtctcctgcaactttgcccatatcatgggccacgttttgcaagatttcctgctttgccttagtcgccatatgaacatcttctgaaacatccttcacacgttgtgcagcctgctttaggacttcttgcttaaacttgagtgcagttgcaatgctacccacagcaatcttcgtgtgttcctttgctactttagagagttgatctgagacctctcctgccatatggctcattacctcagctgttttctctagtaactcctctttttcatgtattgcaactcgtgaacttccaatggtactttgtatgtgttctgctgtacgtttagcaatttcttctttggtctttaggacaacagcagcgtcagctgcttcctggtttacatgttgctcttccccttttccaatttccttgctcatatcattgccatcatttggcgttttctcattcttcgccctaagtagaaaagatataaatgtgtgaaaattataggcacaagcaaaatacaatcactttttttgtacatgcatgtataggattgacatttaaatatgtatcgtaataagcccacatgatatgcatgtgcctttagatttaggagaatattgttttcataccggcgtccgtagtccaactcactatgggacagcaccggagtcaccgtccatagtgagatgagcaacacagagaagattagaacaccgctatagaagttcgccat
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| CDS seq | atggcgaacttctatagcggtgttctaatcttctctgtgttgctcatctcactatggacggtgactccggtgctgtcccatagtgagttggactacggacgccgggcgaagaatgagaaaacgccaaatgatggcaatgatatgagcaaggaaattggaaaaggggaagagcaacatgtaaaccaggaagcagctgacgctgctgttgtcctaaagaccaaagaagaaattgctaaacgtacagcagaacacatacaaagtaccattggaagttcacgagttgcaatacatgaaaaagaggagttactagagaaaacagctgaggtaatgagccatatggcaggagaggtctcagatcaactctctaaagtagcaaaggaacacacgaagattgctgtgggtagcattgcaactgcactcaagtttaagcaagaagtcctaaagcaggctgcacaacgtgtgaaggatgtttcagaagatgttcatatggcgactaaggcaaagcaggaaatcttgcaaaacgtggcccatgatatgggcaaagttgcaggagacatggcaaccagcatggctaagatggctgaggttgcagcaggagtggctggtggggcagcggcaggagtagctactggaattgctggggGttttgctggtggtgctcgggttcatgtatctggaggtatacatgcaaatattcatattagtgctagcgcaagtgcccatgctaaagctagtgcagctgcaagtgctggggttggagctaaagcgagtaaaagtgtcagtggcaatgtaggcaacaacgcagaagaatatgcaggtgccaacggtaatgtccatggaaaagcaaaagctggtatcagtgctggttttggtatctccgcgggtgctaaagttgctgctggcataggagcgaatgctggagttggcggtgatgcacagacaaatgcaaaagccggtgtaggtgctggtattggtatatctggaggcgccaaagttgctggtggcattagagcgaaggcgggagttggtgctgatgcgaatgcaaatgcaaaagccggtataggtgctggtgttggtatctcgggaggtgctaaagttggcgctgacatcggagcgaaggcaggagttggtggtaacgccaatgcaaaagccggtgtcggtgctggtgttggtatctcgggaggcgctaaagttggcgctaagattggagcgaaggcgggagttggtggtgacgtgaatgcaaaagctggtataggtgctggagttggtatctcaggagacgctaaagttggcgctgacattggagcgaaggcgggagttggtgctgatgcgaatgcaaatgcaaaagccggtataggtgctggagttggtatctcaggaggcgctaaagttggcgctgacattggagcgaaggcgggagttggtggtgatgcgtatacaaaggcaaaagccggtgtcggtgctggtgttgggatctcaggaggcgctaaagttgccagtggcaacggagcgaacgcgggagttggtgctgatgcgaatgcaaatgcaaaagccggtataggtgctggagttggtatctcgggagccgctaaagttggcgctgacattggagcgaaggcgggagttggtggtgacgtgaatgcaaaagccggtataggtgctggtgttggtatctcgggaggcgctaaagttggcgctgacatcggagcgaaggctggagttggtgctgacgcgaatgtaaatgcaaaagctggtataggtgctggagctggcatctcaggaggcgctaaagttggtgcagatattggagcgaaggcgggagtaggtgctgatgcgaatgcaaaagctggtataggtgctggtattggtatctcaggaggcgctaaagttggcgttgatatcggagcaaaggctggagttggtgctgacgcaaatgcaaatgcaaaagctggtataggtgctggtgttggtatctcgggaggcgctaaagttggcactgacattggagcgaaggcgggagttgctgcgaaggctggaattggtgctaacgcgaatgcaaatgcaaaagccggtataggtgctggtgttggtatctcgggaggcgctaaagttggcgctgacatcggagcgaaggctggagttggtgctgacgcgaatgcaaatgcaaaagctggtataggcgctggagctggtatctcgggaggcgctaaagttggcgcagatattggagcgaaggcgggtgttggtggtggcgcgattgcaaaagccggtataggtgctggtgttggtatatcgggaggcgctaaagttggtgctgacatcggagcgaaggcgggagttgctggtgacgcgaatgcaaaagttggtataggtgctggtattggtatctcgggaggagctaaagttggtgctgacatcggagcgaaggcgaaagttggtggtgacgcgaatgcaaaagccggtataggtgctggagttggtatctccggaggcgctaaagttggcgctgacattgtagcgaaggcaggagttggtgctgacgcgaatgcaaaagcaaaagccagtataggtgctggagttggtatctcaggaggcgctaaagttggcgctgatattggagcgaaggcgggagttggtggtgatgtgtatacaaaggcaaaagccggtgtcggtgctgatgttgggatctcaggaggcgctaaagttgccggtggcattggaacgaacgcgcgagttggtgctgatgcgaatgcaaatgcaaaagccggtataagtgctggagttggtatctcgggaggcgctaaagttggcgctgacattggagcaaaagcgggagttggtggtgacgtgaatgcaaaagccggtataggtgctggtgttgatatctcgggaggcgctaaagttggcactgacatcggagcgaaggctggagttggtgctgacgcgaatgcaaatgcaaaagctggtataggtgatgtagctggtatctcgggtggcgctaaagttggcgcagatattggagcgaaggcgggagttggtgctgacgcgagtacaaaagctggtataggtgctggtggtggtatctcgggaggcgctaaagttggcgctgatatcggagtgaaggctggagttggtgctgacgcgaatgcaaatgcaaaagatggcataggtgctggagctggtatctcgggaggcgttaaagttggcgcagatattggagcgaaggcgggagttggtgctgacgcgaatgcaaaagctggtataggtgctggtgttggtatctcgggaggcgctaaagttggcgctgatatcggagcgaaggctggagttggtgctgacgcgaatgcaaatgcaaaagctggtataggtgctggagctggtatctcaggaggcgctaaagttggcgcagatattggagcgaaggcgggagttggtgctgacgcgaattcaaaagctggtataggtgctggtgttggtatctcgggaggcgttaaagttggcgctgatatcggagcgaaggctggagttggtgctgacgcaaatgcaaatgcaaaagctggtataggtgctggcgttggtatctcgggaggcgctaaagttggtgctgacattggagcgaaggcgggagttggtgctgacgcgtatacaaaggcaaaagccggtgtaggtgctggtgttgggatctctggaggagctaaagttggcgctgatatcggagcgaaggctggagttggtgctgacgcgaatgcaaatgcaaaagccggtataggtgctggagttggtatctcgggaggcgctaaagttggtggtggcatcggagcaaatgctggagttggtggtgatgcgaaagctaatgctaatgctggcgtcggcgcaaacgctaaagctggtgttggtgctaggattggtggtagtattggagcaaaggcggatgttggtggtgatgcaaaagcgaatgtggatgctggtgccgctatctctaaagatgctaaaattgatgttggtatttctaaagaggataaaatcaatgcaagtattggaggaaatgcaggtgctaacgctaatgccagtgttggtgccggtgtcgggctcggcattggtgctggtatcacaggaggtgctaaagttggtggtggtattggagcaaatgccggtgttggtggagatgcaaaagctaatgctgatgctggtatcaatgctggtgctggtatttctaaagacgctaaaattggtgctaatatctctaaagaagataatatcagtgccggtattggaggaaatgcaggtgttaatgctaatgctggtattggtgctggtgctggtcttggtattggcgtcggtatctcaggaggtgctaaagttggtggtggtattggagcaaatgccggtgttggtggtgatgcgaaagctaatgctgatactggtctcaatgctgatgcgggtatctctaaagacgtaaaaattggtgctagtatctctaaggagaataaaatcaatgctggtgttggaggaaatgcaggtgctaacgctaatgccggtgttggtatcagtgccggtctctcaggaggtgctaaagttggtggtgatattggagcaaatgccggtgttggtggtaatgcaaaagctaacgctgatgctggtctcaatgccggtgccggtatctctaaagaggataaaatcagtgctggtattggaggaaatgcaggtgctaatgttaatgccggtgttggtgctggtattggtatcggtattggtgccggtatctcaggaggtgctaaagttggtggtggtattggagcaaatgccggcgttggtgttgatgcgaaagctaatgctgatgctggtctcaatgctggtgccggtatcgctaaagacgataaaattggtgctagtatctctaaagaggataaaagcagtgctggtatcggaggaaatgcaggtgctaatgctaatgccggtgttggtgtcggtgctaatctcggtattggtgccagtatctcaggaggtgctaaagttggtggtggtattggagcaaatgggggtctcagcgagcacgaggaggacgccggcgacgtgggcggtggctgctcatccccgcccacgccgcctcaccgcgtgctgacgtcggccgcccccgagacgatcaggtgccggtaccacgagtgcctccggaaccacgcggcggcctcgggcggccacgtcgtggatggctgcggcgagttcatgccggcgtccaccgaggagccgctcgcctgcgcggcctgcggctgccaccgcagcttccaccgccgggacccttccccgggccgcgcgggcgcagcacggctgctgcagctgcacctgccggcgtccatcaactcgcgcgcaccacccgcgctgctgctgccgcctgcagcggccgccagcaagcaaggtttgccgttccctggctacggcacgcccagcggcggcactggcaccacgaccgcgtcctccagcgacgagcggctgcggccctcgccggtgcagccacggaggcggtcacgcacgacgttcacgcgggagcagaaggagcagatgctggcgttcgcggagcgcgtggggtggaggatccagcggcaggaggaggcgacggtggagcacttctgcgcgcaggtcggcgtccggaggcaagcgctcaaggtgtggatgcacaacaacaagcatagcttcaagcagaaacagcagcaggagaacaggcaggaacagcagcagtag
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| Protein seq | MANFYSGVLIFSVLLISLWTVTPVLSHSELDYGRRAKNEKTPNDGNDMSKEIGKGEEQHVNQEAADAAVVLKTKEEIAKRTAEHIQSTIGSSRVAIHEKEELLEKTAEVMSHMAGEVSDQLSKVAKEHTKIAVGSIATALKFKQEVLKQAAQRVKDVSEDVHMATKAKQEILQNVAHDMGKVAGDMATSMAKMAEVAAGVAGGAAAGVATGIAGGFAGGARVHVSGGIHANIHISASASAHAKASAAASAGVGAKASKSVSGNVGNNAEEYAGANGNVHGKAKAGISAGFGISAGAKVAAGIGANAGVGGDAQTNAKAGVGAGIGISGGAKVAGGIRAKAGVGADANANAKAGIGAGVGISGGAKVGADIGAKAGVGGNANAKAGVGAGVGISGGAKVGAKIGAKAGVGGDVNAKAGIGAGVGISGDAKVGADIGAKAGVGADANANAKAGIGAGVGISGGAKVGADIGAKAGVGGDAYTKAKAGVGAGVGISGGAKVASGNGANAGVGADANANAKAGIGAGVGISGAAKVGADIGAKAGVGGDVNAKAGIGAGVGISGGAKVGADIGAKAGVGADANVNAKAGIGAGAGISGGAKVGADIGAKAGVGADANAKAGIGAGIGISGGAKVGVDIGAKAGVGADANANAKAGIGAGVGISGGAKVGTDIGAKAGVAAKAGIGANANANAKAGIGAGVGISGGAKVGADIGAKAGVGADANANAKAGIGAGAGISGGAKVGADIGAKAGVGGGAIAKAGIGAGVGISGGAKVGADIGAKAGVAGDANAKVGIGAGIGISGGAKVGADIGAKAKVGGDANAKAGIGAGVGISGGAKVGADIVAKAGVGADANAKAKASIGAGVGISGGAKVGADIGAKAGVGGDVYTKAKAGVGADVGISGGAKVAGGIGTNARVGADANANAKAGISAGVGISGGAKVGADIGAKAGVGGDVNAKAGIGAGVDISGGAKVGTDIGAKAGVGADANANAKAGIGDVAGISGGAKVGADIGAKAGVGADASTKAGIGAGGGISGGAKVGADIGVKAGVGADANANAKDGIGAGAGISGGVKVGADIGAKAGVGADANAKAGIGAGVGISGGAKVGADIGAKAGVGADANANAKAGIGAGAGISGGAKVGADIGAKAGVGADANSKAGIGAGVGISGGVKVGADIGAKAGVGADANANAKAGIGAGVGISGGAKVGADIGAKAGVGADAYTKAKAGVGAGVGISGGAKVGADIGAKAGVGADANANAKAGIGAGVGISGGAKVGGGIGANAGVGGDAKANANAGVGANAKAGVGARIGGSIGAKADVGGDAKANVDAGAAISKDAKIDVGISKEDKINASIGGNAGANANASVGAGVGLGIGAGITGGAKVGGGIGANAGVGGDAKANADAGINAGAGISKDAKIGANISKEDNISAGIGGNAGVNANAGIGAGAGLGIGVGISGGAKVGGGIGANAGVGGDAKANADTGLNADAGISKDVKIGASISKENKINAGVGGNAGANANAGVGISAGLSGGAKVGGDIGANAGVGGNAKANADAGLNAGAGISKEDKISAGIGGNAGANVNAGVGAGIGIGIGAGISGGAKVGGGIGANAGVGVDAKANADAGLNAGAGIAKDDKIGASISKEDKSSAGIGGNAGANANAGVGVGANLGIGASISGGAKVGGGIGANGGLSEHEEDAGDVGGGCSSPPTPPHRVLTSAAPETIRCRYHECLRNHAAASGGHVVDGCGEFMPASTEEPLACAACGCHRSFHRRDPSPGRAGAARLLQLHLPASINSRAPPALLLPPAAAASKQGLPFPGYGTPSGGTGTTTASSSDERLRPSPVQPRRRSRTTFTREQKEQMLAFAERVGWRIQRQEEATVEHFCAQVGVRRQALKVWMHNNKHSFKQKQQQENRQEQQQ |
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| Function | Zinc-finger homeodomain protein 5 [UniProtKB/Swiss-Prot:A2WSZ6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_01g0025470 | OsLima_01g0025470.01 | Chr01 | 27001942 | 27009880 | - | NAM | ||
| CDS seq | atggcgaacttctatagcggtgttctaatcttctctgtgttgctcatctcactatggacggtgactccggtgctgtcccatagtgagttggactacggacgccgggcgaagaatgagaaaacgccaaatgatggcaatgatatgagcaaggaaattggaaaaggggaagagcaacatgtaaaccaggaagcagctgacgctgctgttgtcctaaagaccaaagaagaaattgctaaacgtacagcagaacacatacaaagtaccattggaagttcacgagttgcaatacatgaaaaagaggagttactagagaaaacagctgaggtaatgagccatatggcaggagaggtctcagatcaactctctaaagtagcaaaggaacacacgaagattgctgtgggtagcattgcaactgcactcaagtttaagcaagaagtcctaaagcaggctgcacaacgtgtgaaggatgtttcagaagatgttcatatggcgactaaggcaaagcaggaaatcttgcaaaacgtggcccatgatatgggcaaagttgcaggagacatggcaaccagcatggctaagatggctgaggttgcagcaggagtggctggtggggcagcggcaggagtagctactggaattgctggggGttttgctggtggtgctcgggttcatgtatctggaggtatacatgcaaatattcatattagtgctagcgcaagtgcccatgctaaagctagtgcagctgcaagtgctggggttggagctaaagcgagtaaaagtgtcagtggcaatgtaggcaacaacgcagaagaatatgcaggtgccaacggtaatgtccatggaaaagcaaaagctggtatcagtgctggttttggtatctccgcgggtgctaaagttgctgctggcataggagcgaatgctggagttggcggtgatgcacagacaaatgcaaaagccggtgtaggtgctggtattggtatatctggaggcgccaaagttgctggtggcattagagcgaaggcgggagttggtgctgatgcgaatgcaaatgcaaaagccggtataggtgctggtgttggtatctcgggaggtgctaaagttggcgctgacatcggagcgaaggcaggagttggtggtaacgccaatgcaaaagccggtgtcggtgctggtgttggtatctcgggaggcgctaaagttggcgctaagattggagcgaaggcgggagttggtggtgacgtgaatgcaaaagctggtataggtgctggagttggtatctcaggagacgctaaagttggcgctgacattggagcgaaggcgggagttggtgctgatgcgaatgcaaatgcaaaagccggtataggtgctggagttggtatctcaggaggcgctaaagttggcgctgacattggagcgaaggcgggagttggtggtgatgcgtatacaaaggcaaaagccggtgtcggtgctggtgttgggatctcaggaggcgctaaagttgccagtggcaacggagcgaacgcgggagttggtgctgatgcgaatgcaaatgcaaaagccggtataggtgctggagttggtatctcgggagccgctaaagttggcgctgacattggagcgaaggcgggagttggtggtgacgtgaatgcaaaagccggtataggtgctggtgttggtatctcgggaggcgctaaagttggcgctgacatcggagcgaaggctggagttggtgctgacgcgaatgtaaatgcaaaagctggtataggtgctggagctggcatctcaggaggcgctaaagttggtgcagatattggagcgaaggcgggagtaggtgctgatgcgaatgcaaaagctggtataggtgctggtattggtatctcaggaggcgctaaagttggcgttgatatcggagcaaaggctggagttggtgctgacgcaaatgcaaatgcaaaagctggtataggtgctggtgttggtatctcgggaggcgctaaagttggcactgacattggagcgaaggcgggagttgctgcgaaggctggaattggtgctaacgcgaatgcaaatgcaaaagccggtataggtgctggtgttggtatctcgggaggcgctaaagttggcgctgacatcggagcgaaggctggagttggtgctgacgcgaatgcaaatgcaaaagctggtataggcgctggagctggtatctcgggaggcgctaaagttggcgcagatattggagcgaaggcgggtgttggtggtggcgcgattgcaaaagccggtataggtgctggtgttggtatatcgggaggcgctaaagttggtgctgacatcggagcgaaggcgggagttgctggtgacgcgaatgcaaaagttggtataggtgctggtattggtatctcgggaggagctaaagttggtgctgacatcggagcgaaggcgaaagttggtggtgacgcgaatgcaaaagccggtataggtgctggagttggtatctccggaggcgctaaagttggcgctgacattgtagcgaaggcaggagttggtgctgacgcgaatgcaaaagcaaaagccagtataggtgctggagttggtatctcaggaggcgctaaagttggcgctgatattggagcgaaggcgggagttggtggtgatgtgtatacaaaggcaaaagccggtgtcggtgctgatgttgggatctcaggaggcgctaaagttgccggtggcattggaacgaacgcgcgagttggtgctgatgcgaatgcaaatgcaaaagccggtataagtgctggagttggtatctcgggaggcgctaaagttggcgctgacattggagcaaaagcgggagttggtggtgacgtgaatgcaaaagccggtataggtgctggtgttgatatctcgggaggcgctaaagttggcactgacatcggagcgaaggctggagttggtgctgacgcgaatgcaaatgcaaaagctggtataggtgatgtagctggtatctcgggtggcgctaaagttggcgcagatattggagcgaaggcgggagttggtgctgacgcgagtacaaaagctggtataggtgctggtggtggtatctcgggaggcgctaaagttggcgctgatatcggagtgaaggctggagttggtgctgacgcgaatgcaaatgcaaaagatggcataggtgctggagctggtatctcgggaggcgttaaagttggcgcagatattggagcgaaggcgggagttggtgctgacgcgaatgcaaaagctggtataggtgctggtgttggtatctcgggaggcgctaaagttggcgctgatatcggagcgaaggctggagttggtgctgacgcgaatgcaaatgcaaaagctggtataggtgctggagctggtatctcaggaggcgctaaagttggcgcagatattggagcgaaggcgggagttggtgctgacgcgaattcaaaagctggtataggtgctggtgttggtatctcgggaggcgttaaagttggcgctgatatcggagcgaaggctggagttggtgctgacgcaaatgcaaatgcaaaagctggtataggtgctggcgttggtatctcgggaggcgctaaagttggtgctgacattggagcgaaggcgggagttggtgctgacgcgtatacaaaggcaaaagccggtgtaggtgctggtgttgggatctctggaggagctaaagttggcgctgatatcggagcgaaggctggagttggtgctgacgcgaatgcaaatgcaaaagccggtataggtgctggagttggtatctcgggaggcgctaaagttggtggtggcatcggagcaaatgctggagttggtggtgatgcgaaagctaatgctaatgctggcgtcggcgcaaacgctaaagctggtgttggtgctaggattggtggtagtattggagcaaaggcggatgttggtggtgatgcaaaagcgaatgtggatgctggtgccgctatctctaaagatgctaaaattgatgttggtatttctaaagaggataaaatcaatgcaagtattggaggaaatgcaggtgctaacgctaatgccagtgttggtgccggtgtcgggctcggcattggtgctggtatcacaggaggtgctaaagttggtggtggtattggagcaaatgccggtgttggtggagatgcaaaagctaatgctgatgctggtatcaatgctggtgctggtatttctaaagacgctaaaattggtgctaatatctctaaagaagataatatcagtgccggtattggaggaaatgcaggtgttaatgctaatgctggtattggtgctggtgctggtcttggtattggcgtcggtatctcaggaggtgctaaagttggtggtggtattggagcaaatgccggtgttggtggtgatgcgaaagctaatgctgatactggtctcaatgctgatgcgggtatctctaaagacgtaaaaattggtgctagtatctctaaggagaataaaatcaatgctggtgttggaggaaatgcaggtgctaacgctaatgccggtgttggtatcagtgccggtctctcaggaggtgctaaagttggtggtgatattggagcaaatgccggtgttggtggtaatgcaaaagctaacgctgatgctggtctcaatgccggtgccggtatctctaaagaggataaaatcagtgctggtattggaggaaatgcaggtgctaatgttaatgccggtgttggtgctggtattggtatcggtattggtgccggtatctcaggaggtgctaaagttggtggtggtattggagcaaatgccggcgttggtgttgatgcgaaagctaatgctgatgctggtctcaatgctggtgccggtatcgctaaagacgataaaattggtgctagtatctctaaagaggataaaagcagtgctggtatcggaggaaatgcaggtgctaatgctaatgccggtgttggtgtcggtgctaatctcggtattggtgccagtatctcaggaggtgctaaagttggtggtggtattggagcaaatgggggtctcagcgagcacgaggaggacgccggcgacgtgggcggtggctgctcatccccgcccacgccgcctcaccgcgtgctgacgtcggccgcccccgagacgatcaggtgccggtaccacgagtgcctccggaaccacgcggcggcctcgggcggccacgtcgtggatggctgcggcgagttcatgccggcgtccaccgaggagccgctcgcctgcgcggcctgcggctgccaccgcagcttccaccgccgggacccttccccgggccgcgcgggcgcagcacggctgctgcagctgcacctgccggcgtccatcaactcgcgcgcaccacccgcgctgctgctgccgcctgcagcggccgccagcaagcaaggtttgccgttccctggctacggcacgcccagcggcggcactggcaccacgaccgcgtcctccagcgacgagcggctgcggccctcgccggtgcagccacggaggcggtcacgcacgacgttcacgcgggagcagaaggagcagatgctggcgttcgcggagcgcgtggggtggaggatccagcggcaggaggaggcgacggtggagcacttctgcgcgcaggtcggcgtccggaggcaagcgctcaaggtgtggatgcacaacaacaagcatagcttcaagcagaaacagcagcaggagaacaggcaggaacagcagcagtag
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| Protein seq | MANFYSGVLIFSVLLISLWTVTPVLSHSELDYGRRAKNEKTPNDGNDMSKEIGKGEEQHVNQEAADAAVVLKTKEEIAKRTAEHIQSTIGSSRVAIHEKEELLEKTAEVMSHMAGEVSDQLSKVAKEHTKIAVGSIATALKFKQEVLKQAAQRVKDVSEDVHMATKAKQEILQNVAHDMGKVAGDMATSMAKMAEVAAGVAGGAAAGVATGIAGGFAGGARVHVSGGIHANIHISASASAHAKASAAASAGVGAKASKSVSGNVGNNAEEYAGANGNVHGKAKAGISAGFGISAGAKVAAGIGANAGVGGDAQTNAKAGVGAGIGISGGAKVAGGIRAKAGVGADANANAKAGIGAGVGISGGAKVGADIGAKAGVGGNANAKAGVGAGVGISGGAKVGAKIGAKAGVGGDVNAKAGIGAGVGISGDAKVGADIGAKAGVGADANANAKAGIGAGVGISGGAKVGADIGAKAGVGGDAYTKAKAGVGAGVGISGGAKVASGNGANAGVGADANANAKAGIGAGVGISGAAKVGADIGAKAGVGGDVNAKAGIGAGVGISGGAKVGADIGAKAGVGADANVNAKAGIGAGAGISGGAKVGADIGAKAGVGADANAKAGIGAGIGISGGAKVGVDIGAKAGVGADANANAKAGIGAGVGISGGAKVGTDIGAKAGVAAKAGIGANANANAKAGIGAGVGISGGAKVGADIGAKAGVGADANANAKAGIGAGAGISGGAKVGADIGAKAGVGGGAIAKAGIGAGVGISGGAKVGADIGAKAGVAGDANAKVGIGAGIGISGGAKVGADIGAKAKVGGDANAKAGIGAGVGISGGAKVGADIVAKAGVGADANAKAKASIGAGVGISGGAKVGADIGAKAGVGGDVYTKAKAGVGADVGISGGAKVAGGIGTNARVGADANANAKAGISAGVGISGGAKVGADIGAKAGVGGDVNAKAGIGAGVDISGGAKVGTDIGAKAGVGADANANAKAGIGDVAGISGGAKVGADIGAKAGVGADASTKAGIGAGGGISGGAKVGADIGVKAGVGADANANAKDGIGAGAGISGGVKVGADIGAKAGVGADANAKAGIGAGVGISGGAKVGADIGAKAGVGADANANAKAGIGAGAGISGGAKVGADIGAKAGVGADANSKAGIGAGVGISGGVKVGADIGAKAGVGADANANAKAGIGAGVGISGGAKVGADIGAKAGVGADAYTKAKAGVGAGVGISGGAKVGADIGAKAGVGADANANAKAGIGAGVGISGGAKVGGGIGANAGVGGDAKANANAGVGANAKAGVGARIGGSIGAKADVGGDAKANVDAGAAISKDAKIDVGISKEDKINASIGGNAGANANASVGAGVGLGIGAGITGGAKVGGGIGANAGVGGDAKANADAGINAGAGISKDAKIGANISKEDNISAGIGGNAGVNANAGIGAGAGLGIGVGISGGAKVGGGIGANAGVGGDAKANADTGLNADAGISKDVKIGASISKENKINAGVGGNAGANANAGVGISAGLSGGAKVGGDIGANAGVGGNAKANADAGLNAGAGISKEDKISAGIGGNAGANVNAGVGAGIGIGIGAGISGGAKVGGGIGANAGVGVDAKANADAGLNAGAGIAKDDKIGASISKEDKSSAGIGGNAGANANAGVGVGANLGIGASISGGAKVGGGIGANGGLSEHEEDAGDVGGGCSSPPTPPHRVLTSAAPETIRCRYHECLRNHAAASGGHVVDGCGEFMPASTEEPLACAACGCHRSFHRRDPSPGRAGAARLLQLHLPASINSRAPPALLLPPAAAASKQGLPFPGYGTPSGGTGTTTASSSDERLRPSPVQPRRRSRTTFTREQKEQMLAFAERVGWRIQRQEEATVEHFCAQVGVRRQALKVWMHNNKHSFKQKQQQENRQEQQQ
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_01g0025470 | OsLima_01g0025470.02 | Chr01 | 27001711 | 27002729 | - | IsoSeq | ||
| CDS seq | atggctgcggcgagttcatgccggcgtccaccgaggagccgctcgcctgcgcggcctgcggctgccaccgcagcttccaccgccgggacccttccccgggccgcgcgggcgcagcacggctgctgcagctgcacctgccggcgtccatcaactcgcgcgcaccacccgcgctgctgctgccgcctgcagcggccgccagcaagcaaggtttgccgttccctggctacggcacgcccagcggcggcactggcaccacgaccgcgtcctccagcgacgagcggctgcggccctcgccggtgcagccacggaggcggtcacgcacgacgttcacgcgggagcagaaggagcagatgctggcgttcgcggagcgcgtggggtggaggatccagcggcaggaggaggcgacggtggagcacttctgcgcgcaggtcggcgtccggaggcaagcgctcaaggtgtggatgcacaacaacaagcatagcttcaagcagaaacagcagcaggagaacaggcaggaacagcagcagtaggcaggatgccatgtatgggaggagacaaaggttcgatcgaaacgagcgggga
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| Protein seq | MAAASSCRRPPRSRSPARPAAATAASTAGTLPRAARAQHGCCSCTCRRPSTRAHHPRCCCRLQRPPASKVCRSLATARPAAALAPRPRPPATSGCGPRRCSHGGGHARRSRGSRRSRCWRSRSAWGGGSSGRRRRRWSTSARRSASGGKRSRCGCTTTSIASSRNSSRRTGRNSSSRQDAMYGRRQRFDRNERG |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.844536 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0635600 | RBH | 0.0 | 0.0 | 16.163944 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g44430 | RBH | 0.302908 | 0.549414 | 4.301448 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0635600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0026480 | RBH | 0.187816 | 0.0 | 9.952855 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0026110 | RBH | 0.586170 | 0.0 | 27.302847 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0026460 | RBH | 3.658129 | 0.0 | 54.185791 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0025770 | RBH | 0.035243 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0025510 | RBH | 20.111660 | 3.368976 | 12.601832 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0428400 | RBH | 0.007703 | 0.004071 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0025180 | RBH | 0.174492 | 0.0 | 27.179085 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0417800 | RBH | 0.0094745 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0027810 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0025410 | RBH | 1.765374 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0025690 | RBH | 8.594852 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0025710 | RBH | 2.963071 | 0.0 | 3.135021 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0025560 | RBH | 1.726186 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G025810 | RBH | 0.0 | 0.0 | 5.776313 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0025570 | RBH | 0.0 | 0.0 | 42.552002 |
