Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_01g0023820 | OGI:01040430 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr01:25499191-25507399 | ||||||||
| Gene Symbol | PDR11, OsABCG35, OsPDR11, OsPDR2, PDR8, OsPDR8, PDR4, P0410E03.16, OsABCG37, OsPDR4 | ||||||||||
| DNA seq | gggattgaatcaacaaattttctgctttcattaattcgacaaaaatgaaaacattgaaggccatagtttacattcatctgcatccgacatttatcagctagagctggtcaagaggcaggaagctcaacaagggttctttttcctagagaatcctactagatgtccgaatttttacatgcttgaaataatgaaatactagaagatgatctctataccatttacaggatagctaatagctattcagtagtacaatagaacgaatgcaaaaaagaatgatcactttctcatctcctctggaagttgaacttcatgatcgcaaaactgaagaggaaggcgaaggtcacggcgaagacgacgtgcaccacggccaccacccacaggaagttatgatggaagccaaagtaatcagtgacaaactgtgcaacagttctggtgtcgccttcgagcacatgttggatatcaccaaactgggaagcaactaatccatacaaagtccatgcaaccgggcaaatccaacagtaccacctccaccaaacagggattttctgtagagaaatttaaacgtattagtcctgtgaaaacggttctaaaggactaataaaagcgacatttcatgagaaaagaaagggggcgaaattgagatgggagaataacctaccggtcgagggatcagatatcctgagaagaggttccacacattgtagaaagcggacgagatgattgctgctatgctctcatttggtgtcaaccctaccgccatcattccgtaaaatgtgaaatatagcagtgtgaagtacatgaagaacaagtaccacaagaacttggcaacagtccactcaaatccaatcattgagtataccagcacgccatatatcagagtctgaaccatgatgtatggtaactcaattgcaacctaaaaagggaaaagtggcattgttaggttatgggaccaaaagagcttgacagtgctaacgaatagcttattgcacagccatttcagttcaatcccaaatgcaagtcagaattcaggcatcagagtctttgaagtcatacattatatacatgagattagaactaggccaaccgagagtctaaaagacaaattacctgtccaaatgcatatgggaaagctgaatacatgccagctgctctttctcggtaaaagactgttcgctccaccaccaccactggttgaacagaaccagagttttgcactccaatgtagagaactgcagcatacattgatcccatggcattgaatagatcctgttgttttttactgcaacaagatatgatgagtaaaggtttagaagttatttgtcaaacagattaaaataataagaacatatgttagagacgtacgttctcgttccaaggttccagaacattgttccaaacattagggcaatgacgatagtgaagagtaatctcactgcagtgtaggatggattcctccaatatgaccaattctgcttccacaagcaagctaggcactgtgtaatgaacgatctagagtactgcgtagggaagttgagatcagtagagccaggaggtggtgtgcttagctcctcaataagttccttgttccttctgaaattgcaaatatgcaaaataataataataataattagaattgcagttcaaatacactattcattctattaatcagaatggcatgtgccgaagcttactgatatagctctgactgcctgtagatttcactaaaatcaacaccgagcatctcctcctgggctgaagaggtcacttccaacatccatgttgctggattatatccatcttttatcctactaacgccatcaattccctgaacaaatgaacaacggaatttccgtttgatgtgacttagtcagcctacgtgctgaagcatgaagagatgattgttgtttatgttgattttccgttcttacctcaaagtactcaatcagttttgaggaattctggcccactggaccaacatatatctcttcacctcctctcttcattaggaaaagctgtagataagatgaacagcaacgtagttaatatacagagttcatctaatgaatcaaaggataacttcccaaagaaacaactagtcacctcatcaaatgcttcaaagatgtcaatacttggctggtgaatggtacaaacaacagtcctgccagtgttaacggtgttccttacggtcctcatcacaatcgcagctgcccgagcatcaagaccagatgttggctcatccataaaaataatcgaagggttcgcaacaagctccacagcaatagtaagtctcttgcgttgctcagttgacaggccgctcactccaggaagcccaacaagtgctcccctcagagatgtgagctctacaagatccatgacctcctcaataaacatctgtaatcatggttcagcgcgtaagatgtacagtcagttaacaaccgaaaaacatacacaagaaacaaatgttagcccataatctagctaactaacctttcttgcttctgaatcaacctccgagggtagccgcagccatgcagagaacacaagtgattcatatactgtcacatggggagaatggatgtcattttgctcacaatatcctgatatacgtgcaaaggtctcttgcttctttggatagccagatattctaatatctccctctatgtatcctccagtttttctccctgctaaaacatccatcagtgttgtcttcccggcaccacttacacccatcaatgcagtaagtacacctggcctgaaagaaccactaacaccttttagaagcaacaaacggtcttctgttatgccttgtgctttcattgcctgttaatataaaacaacataattgggttaaaaacctgtgttaacataatgatttttacgcacttgtagtcgttctgagcaaaattacctctggcatgtccactgagtatcttacgtcgttaaaactaatagatagtggtgcaaatgggagcaccattcccttcctgcttgcgctagaatcagcgctgttaattccagagttttggtcagcaatatgggacaattccaattcctgcttcctagatttagtgtccttctgtccctctacaacttcaccagttaagttggcatgcttatctttcaatgcgtcctcagacattgatgcatgagagtcagtgaatgctgcgaaaaaaattcaagtagccacagttattatcttttagctcgcaaatgttgattagatattttggagttctaaaaaatgtctttcaaatatacttacgactcaaaactgaaagagctacagtgtagagcaggttaaagaggagagtgtatccaagcaaagcaccaagtccaatccagtaccacttagcttcagtaaagataccacgagattttagtacactaactcccaaggtcacattttctccaggaagtatctgtgacatgcaaaatacatgttcagttttacagtttataacattgcaagttcaattgctggtgaagaaatgtggcactaacttggctccaactgtgacccaaaaattcatttgtcgaaatagcattttgtgcatacgatagcggggatatccagtaaccccaaatccaccatttcttcacgtcagctataaaagagaaacatgtcaggaacaattagcatttaaaaccatcaatttcaagtacatataagaacatgcaattattgaaagggaatccagtaacttacgtcttgcaaggataaagccacccaatgctgcaaaagccaacagtgataagggtccaaatgtgtgagacacaaccatgtctcttccgattccagcaatgaagcggaatagtgcagatgacatctggttgagtgcaagtagcagcagatactgcttgaagaacctatgcacaaaaagttattcagagtttcagacttcacagaatagactcatttattgtggaacatttctatcaatatactaggcaacaccttgcaaaataatagatatctgcatacgaaataagcttatttcttggattcttttaggcatgtagatatctgcatcaatgcatcttacctgcttacactgggatcaaatccaatgacatagtatgttatgaaaacataaacaccaacttcgagaaatgtgataggaatctgaagaatccatgatggtatggtgtaggcccatgcaggaaagaagagaagatccctttgcttgaagaaaacaggtagtttcatgacagtcatggcaagctctgcgaaaccattaaacatgactgtgtcaagagcaaagtacaatgcccccagatagatcattccataatctctatcatgtcgcatgctggtacggaaaaatgtggtcatcacgatcaatgccattagagttagctgcaatgaaagaaagtttcagatgatcagatcgatcatcgatatcttgaatcaaaattagtgcaccagagatatgaacttacattaacagctttaaaaatgtacataaatgcattcctcttcatgagaagaagctctctatcgatagtggctttgagcaactccttcctgctgacaccatactttgaagtagccagagcagcagggtggctcctggtcctatcaaatggctcagaaagctcattctgtatggatcggcccacatggaaggaacggaacgcatctgcgaattgcttcactggcacaaaacggtatggtctgtcacgcctacaccagtactgcccctgatctttccttgatgtcacctttttcaacaaattcagagatatcagtactgtctattttgaaaaccttgtgcagtaaatggcatgaatttttacagatgataaacagcacatacctcctgcaagaaatcagcaacaccctttctggcagggcatctgaagcccatgaactcaaagaactcaagcacatgttcacggggaccctggtacacaacctgcccgtcagagaggagtataatgtcatcaaacaagttgtatgtttcaggtgctggctggagcaatgagatgacagcagttccgccaaggatgtggatagtctgcctaagggaattcacgatctggtacgtggttgagctgtccagtccagtggatatctcatccatgaacaaagctcttgctggaccaacaagcatttcacctgtgaacatataggacagttagagtttttctttaaagaacaacccccatcttgctaaagactgttagtcatacctgttgtgacacgcttccgttgtccaccagatataccccttaacatctcatttcctactaccgtatcagcacaaatatccaatcctaatatctgcatttatgtagcagagaagcaggaatgagatattatccatacacaaatgccacaagaaatcatatttgtagtactacggtttaatccacagctagcagactgtaccttcaatatgtagtccgtaacaacactagattcttgtcctcccatagctgaggcctacatgtatgaaatataaaaggtgttacttacattgctagtagacatgtatagtatatatcacatgtcctgttgaaatgattcgccaatgcaatcctggttacatatacaattccaagagagagaaaaaaaaaactagaacactcttatgtgatagcatcatcaccttcatgtagatatcaatatcatgatctggcttgatgtttgctgccttttcccttcttgccaactcagtcagcatttctaaacaaagcaaaaacagcaaacctcagtactcatgtcaaaggcgtcaataagcattagatggtaggagtatcatgtaatcttggcattcaggttcataccatatctagtgccaacgccttggcaccgcgccgagaaggccaatgtctccctcacggtcatctccccgatgtggagatcatgctggctgatgtacgccgcggtcctttccgggacgaactcgtgcatcccgtgtccattgtaggtcaccttccccgagaccttgaggtccttgtcgagcttccctgccaacgccaggagcaacgtggtcttgcccgagccaggaggtcccagcagcaaggtcatcctacacagagagcaccaccatggatggatgcgttagcgcgagcgccatgaatcatgatgcactggtacacgcagaagaagatgatgcatggctggctgtgttatgggtttttacctccggggcttgatgatcccgctgacgtcatggaggacggtcatcggctgcttcttgttggggaggatgtggagcgcgttcccgattgcctggagagcacagcacggcaccaccaaccatgtcagcacacagcgatacgcagaaaacttacttctctcggcgaggcagcgcgccgtcgcgtcggcgagagaggggacggccacaagtaccgcgactcgcgcgcgcgcgccacgtgctcgacggaatgccgctgagccccgcccccgcgccgcgaccgcgacgaccacgcatcatgttgttctgcgccgccgcgtcggtggaaaccccgtgagaactcattcgaggtaggaaaagcggtcgccgtctcgccgccgcggcgccgccagcgacggcggcggcggcggtaaggtgggaggtggcggggagagggtgggaggttggtggatagtggaaacggtcaactagtttggttgaacccgaaccagaaagagtctccctgcaggccgggcccgccatgggggcttttagcttagtgggctccactatatctgctccttgtttcccttcttttcaagaaaacgtttttttttccttcaccttttcctatcccaaaaaaaatcttaattttactatttgatctgttcatccacaacttttttttcaggatttaactattcctttaaaaataatcaataatggttttttttattaatttaagatatagattttcaaaacgggtacgtctcgtataaaaacattttatataaaaaatattttaaaataacaaataaatctattttatcggtttaaaatagttaaaacttagttgatcatatgttaataattttcttattttatgtgcctctagttaatcttcatcacccagaatcgaacggtgccgtacgcaaacacacctcacacgacaagagtacacgttgcttgcttgtaattaacctgcacttgcacaagtgccaagtctccccggcaattgggccaactcgtcgggtagcccagggcacaaaactaaagctgagcgtagcaacagtaacccaacccaacacgtgcgtgctgcgttcggtggcgccgtggcgccggcgccggcgccaccgtgtgcacgctctgtccgtcccaccgtttgaccggatgtagccaaagctagcggcgtccgcgcgcgacgccgcggagaccatggccacgctgtttagaccacgttaaaattaaaattttgattaaaattagaacgatgtaacggaaaagttagaagttcatgtgtaagaaaattttaatgcgatgaaaaaattaaaagtttaaagaaaaaatttagaactaaactcggcctctctctcgaatcgtttcatcatctcaaaaacaaaaaacgtttgccttctcctcacgttacatcgcggcatcgcgccgcgccatcaaaccaccacgaggaaaattcacgcggtagtagttacgtacgcacgtacctcgacggtgttggtgacggagttgaggagggtggggaggccgcggttgccgacgtggacgtcggcctccacctcgaggttctcgaaccgcacctcgatggtggggtagtcgatccccacgcggtccatccgctcccggagcttgaggaggaaccgctcgtggtcgtcgtcggcggcgcggaccagccgctcgatcagcgccctgctctccctcgcccccagcctccccacgtccacctccaccttctccccgccggcgccgccgtcctccgacgacaccgccaggatcccccgccgcacgcggtcgtacgtcggcagccgctccagcgccgcccaccgcagcgcctcctcgtcgtcctcctcgtcctggaaccgcgacgacgaccgcgagaacacgtcgccgccgctcctccacatcgacccttccctcctcaggctcgccatcctgtgcacctcccgatccatcctgcttcctcttcctcttcctctcgatgttcttggtgatcgatcgagcaaactcctcctttggggggagttgtgctcttctgcctctgcctgcttggccttgcaaggctaagctacaagttt
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| CDS seq | atggatcgggaggtgcacaggatggcgagcctgaggagggaagggtcgatgtggaggagcggcggcgacgtgttctcgcggtcgtcgtcgcggttccaggacgaggaggacgacgaggaggcgctgcggtgggcggcgctggagcggctgccgacgtacgaccgcgtgcggcgggggatcctggcggtgtcgtcggaggacggcggcgccggcggggagaaggtggaggtggacgtggggaggctgggggcgagggagagcagggcgctgatcgagcggctggtccgcgccgccgacgacgaccacgagcggttcctcctcaagctccgggagcggatggaccgcgtggggatcgactaccccaccatcgaggtgcggttcgagaacctcgaggtggaggccgacgtccacgtcggcaaccgcggcctccccaccctcctcaactccgtcaccaacaccgtcgaggcaatcgggaacgcgctccacatcctccccaacaagaagcagccgatgaccgtcctccatgacgtcagcgggatcatcaagccccggaggatgaccttgctgctgggacctcctggctcgggcaagaccacgttgctcctggcgttggcagggaagctcgacaaggacctcaaggtctcggggaaggtgacctacaatggacacgggatgcacgagttcgtcccggaaaggaccgcggcgtacatcagccagcatgatctccacatcggggagatgaccgtgagggagacattggccttctcggcgcggtgccaaggcgttggcactagatatgaaatgctgactgagttggcaagaagggaaaaggcagcaaacatcaagccagatcatgatattgatatctacatgaaggcctcagctatgggaggacaagaatctagtgttgttacggactacatattgaagatattaggattggatatttgtgctgatacggtagtaggaaatgagatgttaaggggtatatctggtggacaacggaagcgtgtcacaacaggtgaaatgcttgttggtccagcaagagctttgttcatggatgagatatccactggactggacagctcaaccacgtaccagatcgtgaattcccttaggcagactatccacatccttggcggaactgctgtcatctcattgctccagccagcacctgaaacatacaacttgtttgatgacattatactcctctctgacgggcaggttgtgtaccagggtccccgtgaacatgtgcttgagttctttgagttcatgggcttcagatgccctgccagaaagggtgttgctgatttcttgcaggaggtgacatcaaggaaagatcaggggcagtactggtgtaggcgtgacagaccataccgttttgtgccagtgaagcaattcgcagatgcgttccgttccttccatgtgggccgatccatacagaatgagctttctgagccatttgataggaccaggagccaccctgctgctctggctacttcaaagtatggtgtcagcaggaaggagttgctcaaagccactatcgatagagagcttcttctcatgaagaggaatgcatttatgtacatttttaaagctgttaatctaactctaatggcattgatcgtgatgaccacatttttccgtaccagcatgcgacatgatagagattatggaatgatctatctgggggcattgtactttgctcttgacacagtcatgtttaatggtttcgcagagcttgccatgactgtcatgaaactacctgttttcttcaagcaaagggatcttctcttctttcctgcatgggcctacaccataccatcatggattcttcagattcctatcacatttctcgaagttggtgtttatgttttcataacatactatgtcattggatttgatcccagtgtaagcaggttcttcaagcagtatctgctgctacttgcactcaaccagatgtcatctgcactattccgcttcattgctggaatcggaagagacatggttgtgtctcacacatttggacccttatcactgttggcttttgcagcattgggtggctttatccttgcaagacctgacgtgaagaaatggtggatttggggttactggatatccccgctatcgtatgcacaaaatgctatttcgacaaatgaatttttgggtcacagttggagccaaatacttcctggagaaaatgtgaccttgggagttagtgtactaaaatctcgtggtatctttactgaagctaagtggtactggattggacttggtgctttgcttggatacactctcctctttaacctgctctacactgtagctctttcagttttgagtccattcactgactctcatgcatcaatgtctgaggacgcattgaaagataagcatgccaacttaactggtgaagttgtagagggacagaaggacactaaatctaggaagcaggaattggaattgtcccatattgctgaccaaaactctggaattaacagcgctgattctagcgcaagcaggaagggaatggtgctcccatttgcaccactatctattagttttaacgacgtaagatactcagtggacatgccagaggcaatgaaagcacaaggcataacagaagaccgtttgttgcttctaaaaggtgttagtggttctttcaggccaggtgtacttactgcattgatgggtgtaagtggtgccgggaagacaacactgatggatgttttagcagggagaaaaactggaggatacatagagggagatattagaatatctggctatccaaagaagcaagagacctttgcacgtatatcaggatattgtgagcaaaatgacatccattctccccatgtgacagtatatgaatcacttgtgttctctgcatggctgcggctaccctcggaggttgattcagaagcaagaaagatgtttattgaggaggtcatggatcttgtagagctcacatctctgaggggagcacttgttgggcttcctggagtgagcggcctgtcaactgagcaacgcaagagacttactattgctgtggagcttgttgcgaacccttcgattatttttatggatgagccaacatctggtcttgatgctcgggcagctgcgattgtgatgaggaccgtaaggaacaccgttaacactggcaggactgttgtttgtaccattcaccagccaagtattgacatctttgaagcatttgatgagcttttcctaatgaagagaggaggtgaagagatatatgttggtccagtgggccagaattcctcaaaactgattgagtactttgagggaattgatggcgttagtaggataaaagatggatataatccagcaacatggatgttggaagtgacctcttcagcccaggaggagatgctcggtgttgattttagtgaaatctacaggcagtcagagctatatcaaaggaacaaggaacttattgaggagctaagcacaccacctcctggctctactgatctcaacttccctacgcagtactctagatcgttcattacacagtgcctagcttgcttgtggaagcagaattggtcatattggaggaatccatcctacactgcagtgagattactcttcactatcgtcattgccctaatgtttggaacaatgttctggaaccttggaacgagaactaaaaaacaacaggatctattcaatgccatgggatcaatgtatgctgcagttctctacattggagtgcaaaactctggttctgttcaaccagtggtggtggtggagcgaacagtcttttaccgagaaagagcagctggcatgtattcagctttcccatatgcatttggacaggttgcaattgagttaccatacatcatggttcagactctgatatatggcgtgctggtatactcaatgattggatttgagtggactgttgccaagttcttgtggtacttgttcttcatgtacttcacactgctatatttcacattttacggaatgatggcggtagggttgacaccaaatgagagcatagcagcaatcatctcgtccgctttctacaatgtgtggaacctcttctcaggatatctgatccctcgaccgaaaatccctgtttggtggaggtggtactgttggatttgcccggttgcatggactttgtatggattagttgcttcccagtttggtgatatccaacatgtgctcgaaggcgacaccagaactgttgcacagtttgtcactgattactttggcttccatcataacttcctgtgggtggtggccgtggtgcacgtcgtcttcgccgtgaccttcgccttcctcttcagttttgcgatcatgaagttcaacttccagaggagatga
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| Protein seq | MDREVHRMASLRREGSMWRSGGDVFSRSSSRFQDEEDDEEALRWAALERLPTYDRVRRGILAVSSEDGGAGGEKVEVDVGRLGARESRALIERLVRAADDDHERFLLKLRERMDRVGIDYPTIEVRFENLEVEADVHVGNRGLPTLLNSVTNTVEAIGNALHILPNKKQPMTVLHDVSGIIKPRRMTLLLGPPGSGKTTLLLALAGKLDKDLKVSGKVTYNGHGMHEFVPERTAAYISQHDLHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAANIKPDHDIDIYMKASAMGGQESSVVTDYILKILGLDICADTVVGNEMLRGISGGQRKRVTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQTIHILGGTAVISLLQPAPETYNLFDDIILLSDGQVVYQGPREHVLEFFEFMGFRCPARKGVADFLQEVTSRKDQGQYWCRRDRPYRFVPVKQFADAFRSFHVGRSIQNELSEPFDRTRSHPAALATSKYGVSRKELLKATIDRELLLMKRNAFMYIFKAVNLTLMALIVMTTFFRTSMRHDRDYGMIYLGALYFALDTVMFNGFAELAMTVMKLPVFFKQRDLLFFPAWAYTIPSWILQIPITFLEVGVYVFITYYVIGFDPSVSRFFKQYLLLLALNQMSSALFRFIAGIGRDMVVSHTFGPLSLLAFAALGGFILARPDVKKWWIWGYWISPLSYAQNAISTNEFLGHSWSQILPGENVTLGVSVLKSRGIFTEAKWYWIGLGALLGYTLLFNLLYTVALSVLSPFTDSHASMSEDALKDKHANLTGEVVEGQKDTKSRKQELELSHIADQNSGINSADSSASRKGMVLPFAPLSISFNDVRYSVDMPEAMKAQGITEDRLLLLKGVSGSFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGYPKKQETFARISGYCEQNDIHSPHVTVYESLVFSAWLRLPSEVDSEARKMFIEEVMDLVELTSLRGALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVNTGRTVVCTIHQPSIDIFEAFDELFLMKRGGEEIYVGPVGQNSSKLIEYFEGIDGVSRIKDGYNPATWMLEVTSSAQEEMLGVDFSEIYRQSELYQRNKELIEELSTPPPGSTDLNFPTQYSRSFITQCLACLWKQNWSYWRNPSYTAVRLLFTIVIALMFGTMFWNLGTRTKKQQDLFNAMGSMYAAVLYIGVQNSGSVQPVVVVERTVFYRERAAGMYSAFPYAFGQVAIELPYIMVQTLIYGVLVYSMIGFEWTVAKFLWYLFFMYFTLLYFTFYGMMAVGLTPNESIAAIISSAFYNVWNLFSGYLIPRPKIPVWWRWYCWICPVAWTLYGLVASQFGDIQHVLEGDTRTVAQFVTDYFGFHHNFLWVVAVVHVVFAVTFAFLFSFAIMKFNFQRR |
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| Function | ABC transporter G family member 37 [UniProtKB/Swiss-Prot:Q8GU89] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_01g0023820 | OsLima_01g0023820.01 | Chr01 | 25499191 | 25507399 | - | NAM | ||
| CDS seq | atgttcacaggtgaaatgcttgttggtccagcaagagctttgttcatggatgagatatccactggactggacagctcaaccacgtaccagatcgtgaattcccttaggcagactatccacatccttggcggaactgctgtcatctcattgctccagccagcacctgaaacatacaacttgtttgatgacattatactcctctctgacgggcaggttgtgtaccagggtccccgtgaacatgtgcttgagttctttgagttcatgggcttcagatgccctgccagaaagggtgttgctgatttcttgcaggaggtgacatcaaggaaagatcaggggcagtactggtgtaggcgtgacagaccataccgttttgtgccagtgaagcaattcgcagatgcgttccgttccttccatgtgggccgatccatacagaatgagctttctgagccatttgataggaccaggagccaccctgctgctctggctacttcaaagtatggtgtcagcaggaaggagttgctcaaagccactatcgatagagagcttcttctcatgaagaggaatgcatttatgtacatttttaaagctgttaatctaactctaatggcattgatcgtgatgaccacatttttccgtaccagcatgcgacatgatagagattatggaatgatctatctgggggcattgtactttgctcttgacacagtcatgtttaatggtttcgcagagcttgccatgactgtcatgaaactacctgttttcttcaagcaaagggatcttctcttctttcctgcatgggcctacaccataccatcatggattcttcagattcctatcacatttctcgaagttggtgtttatgttttcataacatactatgtcattggatttgatcccagtgtaagcaggttcttcaagcagtatctgctgctacttgcactcaaccagatgtcatctgcactattccgcttcattgctggaatcggaagagacatggttgtgtctcacacatttggacccttatcactgttggcttttgcagcattgggtggctttatccttgcaagacctgacgtgaagaaatggtggatttggggttactggatatccccgctatcgtatgcacaaaatgctatttcgacaaatgaatttttgggtcacagttggagccaaatacttcctggagaaaatgtgaccttgggagttagtgtactaaaatctcgtggtatctttactgaagctaagtggtactggattggacttggtgctttgcttggatacactctcctctttaacctgctctacactgtagctctttcagttttgagtccattcactgactctcatgcatcaatgtctgaggacgcattgaaagataagcatgccaacttaactggtgaagttgtagagggacagaaggacactaaatctaggaagcaggaattggaattgtcccatattgctgaccaaaactctggaattaacagcgctgattctagcgcaagcaggaagggaatggtgctcccatttgcaccactatctattagttttaacgacgtaagatactcagtggacatgccagaggcaatgaaagcacaaggcataacagaagaccgtttgttgcttctaaaaggtgttagtggttctttcaggccaggtgtacttactgcattgatgggtgtaagtggtgccgggaagacaacactgatggatgttttagcagggagaaaaactggaggatacatagagggagatattagaatatctggctatccaaagaagcaagagacctttgcacgtatatcaggatattgtgagcaaaatgacatccattctccccatgtgacagtatatgaatcacttgtgttctctgcatggctgcggctaccctcggaggttgattcagaagcaagaaagatgtttattgaggaggtcatggatcttgtagagctcacatctctgaggggagcacttgttgggcttcctggagtgagcggcctgtcaactgagcaacgcaagagacttactattgctgtggagcttgttgcgaacccttcgattatttttatggatgagccaacatctggtcttgatgctcgggcagctgcgattgtgatgaggaccgtaaggaacaccgttaacactggcaggactgttgtttgtaccattcaccagccaagtattgacatctttgaagcatttgatgagcttttcctaatgaagagaggaggtgaagagatatatgttggtccagtgggccagaattcctcaaaactgattgagtactttgagggaattgatggcgttagtaggataaaagatggatataatccagcaacatggatgttggaagtgacctcttcagcccaggaggagatgctcggtgttgattttagtgaaatctacaggcagtcagagctatatcaaaggaacaaggaacttattgaggagctaagcacaccacctcctggctctactgatctcaacttccctacgcagtactctagatcgttcattacacagtgcctagcttgcttgtggaagcagaattggtcatattggaggaatccatcctacactgcagtgagattactcttcactatcgtcattgccctaatgtttggaacaatgttctggaaccttggaacgagaactaaaaaacaacaggatctattcaatgccatgggatcaatgtatgctgcagttctctacattggagtgcaaaactctggttctgttcaaccagtggtggtggtggagcgaacagtcttttaccgagaaagagcagctggcatgtattcagctttcccatatgcatttggacaggttgcaattgagttaccatacatcatggttcagactctgatatatggcgtgctggtatactcaatgattggatttgagtggactgttgccaagttcttgtggtacttgttcttcatgtacttcacactgctatatttcacattttacggaatgatggcggtagggttgacaccaaatgagagcatagcagcaatcatctcgtccgctttctacaatgtgtggaacctcttctcaggatatctgatccctcgaccgaaaatccctgtttggtggaggtggtactgttggatttgcccggttgcatggactttgtatggattagttgcttcccagtttggtgatatccaacatgtgctcgaaggcgacaccagaactgttgcacagtttgtcactgattactttggcttccatcataacttcctgtgggtggtggccgtggtgcacgtcgtcttcgccgtgaccttcgccttcctcttcagttttgcgatcatgaagttcaacttccagaggagatga
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| Protein seq | MFTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQTIHILGGTAVISLLQPAPETYNLFDDIILLSDGQVVYQGPREHVLEFFEFMGFRCPARKGVADFLQEVTSRKDQGQYWCRRDRPYRFVPVKQFADAFRSFHVGRSIQNELSEPFDRTRSHPAALATSKYGVSRKELLKATIDRELLLMKRNAFMYIFKAVNLTLMALIVMTTFFRTSMRHDRDYGMIYLGALYFALDTVMFNGFAELAMTVMKLPVFFKQRDLLFFPAWAYTIPSWILQIPITFLEVGVYVFITYYVIGFDPSVSRFFKQYLLLLALNQMSSALFRFIAGIGRDMVVSHTFGPLSLLAFAALGGFILARPDVKKWWIWGYWISPLSYAQNAISTNEFLGHSWSQILPGENVTLGVSVLKSRGIFTEAKWYWIGLGALLGYTLLFNLLYTVALSVLSPFTDSHASMSEDALKDKHANLTGEVVEGQKDTKSRKQELELSHIADQNSGINSADSSASRKGMVLPFAPLSISFNDVRYSVDMPEAMKAQGITEDRLLLLKGVSGSFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGYPKKQETFARISGYCEQNDIHSPHVTVYESLVFSAWLRLPSEVDSEARKMFIEEVMDLVELTSLRGALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVNTGRTVVCTIHQPSIDIFEAFDELFLMKRGGEEIYVGPVGQNSSKLIEYFEGIDGVSRIKDGYNPATWMLEVTSSAQEEMLGVDFSEIYRQSELYQRNKELIEELSTPPPGSTDLNFPTQYSRSFITQCLACLWKQNWSYWRNPSYTAVRLLFTIVIALMFGTMFWNLGTRTKKQQDLFNAMGSMYAAVLYIGVQNSGSVQPVVVVERTVFYRERAAGMYSAFPYAFGQVAIELPYIMVQTLIYGVLVYSMIGFEWTVAKFLWYLFFMYFTLLYFTFYGMMAVGLTPNESIAAIISSAFYNVWNLFSGYLIPRPKIPVWWRWYCWICPVAWTLYGLVASQFGDIQHVLEGDTRTVAQFVTDYFGFHHNFLWVVAVVHVVFAVTFAFLFSFAIMKFNFQRR
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_01g0023820 | OsLima_01g0023820.02 | Chr01 | 25499197 | 25507399 | - | NAM | ||
| CDS seq | atggatcgggaggtgcacaggatggcgagcctgaggagggaagggtcgatgtggaggagcggcggcgacgtgttctcgcggtcgtcgtcgcggttccaggacgaggaggacgacgaggaggcgctgcggtgggcggcgctggagcggctgccgacgtacgaccgcgtgcggcgggggatcctggcggtgtcgtcggaggacggcggcgccggcggggagaaggtggaggtggacgtggggaggctgggggcgagggagagcagggcgctgatcgagcggctggtccgcgccgccgacgacgaccacgagcggttcctcctcaagctccgggagcggatggaccgcgtggggatcgactaccccaccatcgaggtgcggttcgagaacctcgaggtggaggccgacgtccacgtcggcaaccgcggcctccccaccctcctcaactccgtcaccaacaccgtcgaggcaatcgggaacgcgctccacatcctccccaacaagaagcagccgatgaccgtcctccatgacgtcagcgggatcatcaagccccggaggatgaccttgctgctgggacctcctggctcgggcaagaccacgttgctcctggcgttggcagggaagctcgacaaggacctcaaggtctcggggaaggtgacctacaatggacacgggatgcacgagttcgtcccggaaaggaccgcggcgtacatcagccagcatgatctccacatcggggagatgaccgtgagggagacattggccttctcggcgcggtgccaaggcgttggcactagatatgaaatgctgactgagttggcaagaagggaaaaggcagcaaacatcaagccagatcatgatattgatatctacatgaaggcctcagctatgggaggacaagaatctagtgttgttacggactacatattgaagatattaggattggatatttgtgctgatacggtagtaggaaatgagatgttaaggggtatatctggtggacaacggaagcgtgtcacaacaggtgaaatgcttgttggtccagcaagagctttgttcatggatgagatatccactggactggacagctcaaccacgtaccagatcgtgaattcccttaggcagactatccacatccttggcggaactgctgtcatctcattgctccagccagcacctgaaacatacaacttgtttgatgacattatactcctctctgacgggcaggttgtgtaccagggtccccgtgaacatgtgcttgagttctttgagttcatgggcttcagatgccctgccagaaagggtgttgctgatttcttgcaggaggtgacatcaaggaaagatcaggggcagtactggtgtaggcgtgacagaccataccgttttgtgccagtgaagcaattcgcagatgcgttccgttccttccatgtgggccgatccatacagaatgagctttctgagccatttgataggaccaggagccaccctgctgctctggctacttcaaagtatggtgtcagcaggaaggagttgctcaaagccactatcgatagagagcttcttctcatgaagaggaatgcatttatgtacatttttaaagctgttaatctaactctaatggcattgatcgtgatgaccacatttttccgtaccagcatgcgacatgatagagattatggaatgatctatctgggggcattgtactttgctcttgacacagtcatgtttaatggtttcgcagagcttgccatgactgtcatgaaactacctgttttcttcaagcaaagggatcttctcttctttcctgcatgggcctacaccataccatcatggattcttcagattcctatcacatttctcgaagttggtgtttatgttttcataacatactatgtcattggatttgatcccagtgtaagcaggttcttcaagcagtatctgctgctacttgcactcaaccagatgtcatctgcactattccgcttcattgctggaatcggaagagacatggttgtgtctcacacatttggacccttatcactgttggcttttgcagcattgggtggctttatccttgcaagacctgacgtgaagaaatggtggatttggggttactggatatccccgctatcgtatgcacaaaatgctatttcgacaaatgaatttttgggtcacagttggagccaaatacttcctggagaaaatgtgaccttgggagttagtgtactaaaatctcgtggtatctttactgaagctaagtggtactggattggacttggtgctttgcttggatacactctcctctttaacctgctctacactgtagctctttcagttttgagtccattcactgactctcatgcatcaatgtctgaggacgcattgaaagataagcatgccaacttaactggtgaagttgtagagggacagaaggacactaaatctaggaagcaggaattggaattgtcccatattgctgaccaaaactctggaattaacagcgctgattctagcgcaagcaggaagggaatggtgctcccatttgcaccactatctattagttttaacgacgtaagatactcagtggacatgccagaggcaatgaaagcacaaggcataacagaagaccgtttgttgcttctaaaaggtgttagtggttctttcaggccaggtgtacttactgcattgatgggtgtaagtggtgccgggaagacaacactgatggatgttttagcagggagaaaaactggaggatacatagagggagatattagaatatctggctatccaaagaagcaagagacctttgcacgtatatcaggatattgtgagcaaaatgacatccattctccccatgtgacagtatatgaatcacttgtgttctctgcatggctgcggctaccctcggaggttgattcagaagcaagaaagatgtttattgaggaggtcatggatcttgtagagctcacatctctgaggggagcacttgttgggcttcctggagtgagcggcctgtcaactgagcaacgcaagagacttactattgctgtggagcttgttgcgaacccttcgattatttttatggatgagccaacatctggtcttgatgctcgggcagctgcgattgtgatgaggaccgtaaggaacaccgttaacactggcaggactgttgtttgtaccattcaccagccaagtattgacatctttgaagcatttgatgagcttttcctaatgaagagaggaggtgaagagatatatgttggtccagtgggccagaattcctcaaaactgattgagtactttgagggaattgatggcgttagtaggataaaagatggatataatccagcaacatggatgttggaagtgacctcttcagcccaggaggagatgctcggtgttgattttagtgaaatctacaggcagtcagagctatatcaaaggaacaaggaacttattgaggagctaagcacaccacctcctggctctactgatctcaacttccctacgcagtactctagatcgttcattacacagtgcctagcttgcttgtggaagcagaattggtcatattggaggaatccatcctacactgcagtgagattactcttcactatcgtcattgccctaatgtttggaacaatgttctggaaccttggaacgagaactaaaaaacaacaggatctattcaatgccatgggatcaatgtatgctgcagttctctacattggagtgcaaaactctggttctgttcaaccagtggtggtggtggagcgaacagtcttttaccgagaaagagcagctggcatgtattcagctttcccatatgcatttggacaggttgcaattgagttaccatacatcatggttcagactctgatatatggcgtgctggtatactcaatgattggatttgagtggactgttgccaagttcttgtggtacttgttcttcatgtacttcacactgctatatttcacattttacggaatgatggcggtagggttgacaccaaatgagagcatagcagcaatcatctcgtccgctttctacaatgtgtggaacctcttctcaggatatctgatccctcgaccgaaaatccctgtttggtggaggtggtactgttggatttgcccggttgcatggactttgtatggattagttgcttcccagtttggtgatatccaacatgtgctcgaaggcgacaccagaactgttgcacagtttgtcactgattactttggcttccatcataacttcctgtgggtggtggccgtggtgcacgtcgtcttcgccgtgaccttcgccttcctcttcagttttgcgatcatgaagttcaacttccagaggagatga
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| Protein seq | MDREVHRMASLRREGSMWRSGGDVFSRSSSRFQDEEDDEEALRWAALERLPTYDRVRRGILAVSSEDGGAGGEKVEVDVGRLGARESRALIERLVRAADDDHERFLLKLRERMDRVGIDYPTIEVRFENLEVEADVHVGNRGLPTLLNSVTNTVEAIGNALHILPNKKQPMTVLHDVSGIIKPRRMTLLLGPPGSGKTTLLLALAGKLDKDLKVSGKVTYNGHGMHEFVPERTAAYISQHDLHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAANIKPDHDIDIYMKASAMGGQESSVVTDYILKILGLDICADTVVGNEMLRGISGGQRKRVTTGEMLVGPARALFMDEISTGLDSSTTYQIVNSLRQTIHILGGTAVISLLQPAPETYNLFDDIILLSDGQVVYQGPREHVLEFFEFMGFRCPARKGVADFLQEVTSRKDQGQYWCRRDRPYRFVPVKQFADAFRSFHVGRSIQNELSEPFDRTRSHPAALATSKYGVSRKELLKATIDRELLLMKRNAFMYIFKAVNLTLMALIVMTTFFRTSMRHDRDYGMIYLGALYFALDTVMFNGFAELAMTVMKLPVFFKQRDLLFFPAWAYTIPSWILQIPITFLEVGVYVFITYYVIGFDPSVSRFFKQYLLLLALNQMSSALFRFIAGIGRDMVVSHTFGPLSLLAFAALGGFILARPDVKKWWIWGYWISPLSYAQNAISTNEFLGHSWSQILPGENVTLGVSVLKSRGIFTEAKWYWIGLGALLGYTLLFNLLYTVALSVLSPFTDSHASMSEDALKDKHANLTGEVVEGQKDTKSRKQELELSHIADQNSGINSADSSASRKGMVLPFAPLSISFNDVRYSVDMPEAMKAQGITEDRLLLLKGVSGSFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGYPKKQETFARISGYCEQNDIHSPHVTVYESLVFSAWLRLPSEVDSEARKMFIEEVMDLVELTSLRGALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVNTGRTVVCTIHQPSIDIFEAFDELFLMKRGGEEIYVGPVGQNSSKLIEYFEGIDGVSRIKDGYNPATWMLEVTSSAQEEMLGVDFSEIYRQSELYQRNKELIEELSTPPPGSTDLNFPTQYSRSFITQCLACLWKQNWSYWRNPSYTAVRLLFTIVIALMFGTMFWNLGTRTKKQQDLFNAMGSMYAAVLYIGVQNSGSVQPVVVVERTVFYRERAAGMYSAFPYAFGQVAIELPYIMVQTLIYGVLVYSMIGFEWTVAKFLWYLFFMYFTLLYFTFYGMMAVGLTPNESIAAIISSAFYNVWNLFSGYLIPRPKIPVWWRWYCWICPVAWTLYGLVASQFGDIQHVLEGDTRTVAQFVTDYFGFHHNFLWVVAVVHVVFAVTFAFLFSFAIMKFNFQRR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| RI | Chr01 | 25504008 | 25504474 | - | OsLima_01g0023820.01 | OsLima_01g0023820.01,OsLima_01g0023820.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.761795 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0609900 | RBH | 6.932333 | 6.204774 | 0.323454 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g42410 | SBH | 4.559407 | 4.252723 | 0.087052 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0609900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0024830 | SBH | 0.019954 | 33.217026 | 0.524137 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0024420 | RBH | 0.029190 | 0.244356 | 1.845220 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0024750 | SBH | 0.142272 | 0.633226 | 4.707107 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0024120 | RBH | 0.077432 | 0.016066 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0023890 | RBH | 1.213428 | 65.874649 | 1.288239 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0404100 | SBH | 0.9980075 | 0.8280275 | 1.1782715 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0023530 | SBH | 0.057379 | 0.107513 | 0.284879 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0392900 | SBH | 1.8097255 | 80.706028 | 4.86855 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0023780 | RBH | 0.018824 | 0.013805 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0023770 | SBH | 0.082753 | 0.685305 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0024020 | RBH | 1.011927 | 1.351395 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0024040 | SBH | 0.248899 | 0.000000 | 0.547184 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0023910 | RBH | 0.026593 | 0.470058 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G024170 | RBH | 0.130157 | 17.161102 | 0.438337 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0023870 | RBH | 0.192063 | 0.459928 | 3.730208 |
