Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_Ung0071140 | OGI:99064780 | 1/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | ChrUN-Ctg535:214669-217030 | ||||||||
| Gene Symbol | NAC25, ONAC025, ONAC25, OsEnS-144, SS1 | ||||||||||
| DNA seq | tcactgcagtgcctttgagctttcgttctctagagtgtctagggtgaatcttcagcgagtgagcgagcgatctctgtgttgtgtagtttgtgagctagggtgatggctaacaccggacttagcatccccatggtgaatggtgccacaatccacctcctccctggtttccggttccgtccaactgacgatgagctagtcatcaaatacctctacccccgtgcttttcatgtgccactgccctgtgcgatcatcaccgatgttgacatccatcatcacaacccctgggacatcgtcccaggttaattttgatatgcacttctttgcttctatgaaaattattaccacatccgtctgcatatatctctgatttgactgattaattgcatgtgtgtcctgacgatatttattctcttgttttgtttgtcatttttttcgtttgttcgttggcaacgatctgatgatgaagtggcggagagggagaaagggaagcacttcttcacaagaaaggaggtcaagtaccctggtagccgccgtagcaaccgtgttgctggtaatggcttctggagagcagcaggctcggaggtgcccatctattacaaaccagaaggtgctgctgacgacatgctagttgggatgaggcggactctagtgttccactacggaaagtcacgatctgcagagcgcactgaatgggccatgcatgagtttcagcttgctggtgctggtctccttcctcaccctatgatgaggcgtgcaaccagcaatggttcagagccaccctgtggctgccttgaagcgacattcgctaaggtgagatgctacctccaaaaattttactgttccatttatcatgattccatctaaatgcctgttgaattaaattgctcaattatttgcataggttggattatgagttttagctttagggaatggggaaaatatgatgatttagtatacgtgatgatatactataactcttgtgttgatttattaaataagggaagggtagttgttttcgatcttaggactaagggtacgtgacgcttgatatagggttcatttattgttgccatgcaagatgcgcgggatctagaagtgattcaaattttgtcgtgacaaggaatctagaggtggtgggcctgctgatttgaatttgtcatagcctcacatggttttccttatgtattactaggatgtaatgatgattaattgattttgccgtgaagtgagatctagcggttacaagatctactagtgattcaaatatattgagaaaaaaaggggtttgctgtctacttgcattttcagtagggaacctctttattgaacaccacgtgtcatgatacacttgatactgggatatttggatttgtacatctggttttaatttgatcattgccacaagatttatataagtgacatgtcaacagtttacttctcaaattagttgcaacattcaaactggacatgaagttatcacacatctttctaattcagtcaccatatgatttgtcacagtaagaggcttataaactagtttactataatggtcaattcatctattctctttgttgtatatgttgtatataccatggttgcaccttaagtagatccactaacagacaaaatggtgtctattttacagaaaagtgatggtctctctgcaactcttcgtgccaagcgtgattctgcccctcttatgagaatcatggtagaacccgatagctcatgggtgatctgctgcatctacaagaagaggcagcgtgccccgcctgttgttatccctcctgtcattggcgatgtaggggaagctatcatccctcatgctattggcgatgcaagggaaggccaacttcacttcattgacttcctggggcagccagctcgcaatgatccatcctcgcccatagctgcaccattgacccctcctctttggaggaagggagtgatgagtctgccggtgatggtgaatataaggatggtgatggcatgaatgaagcaaattgatcgagtgtgaaggaagtgaactgagtctcaagaataaaaactgcaagtatggcgctccattccatggaagacctgcatgcatcctatatatgtgcttttatgttcaagttggagaactatgtgtgttgtctttaagttggagtactctaagctattcgatctggagattatgctgtttttaataaaagtttgaagtgtatctgtcctgtttaattagtttcaagaaagccaagcgtgtttgggttctaggatgaacaaagtcgtccaagatgcaagaagttctagagaggtagctacatttctggaaattgttgcatcttcctttcttcaatatatatatattgtcctatttcat
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| CDS seq | atggctaacaccggacttagcatccccatggtgaatggtgccacaatccacctcctccctggtttccggttccgtccaactgacgatgagctagtcatcaaatacctctacccccgtgcttttcatgtgccactgccctgtgcgatcatcaccgatgttgacatccatcatcacaacccctgggacatcgtcccagtggcggagagggagaaagggaagcacttcttcacaagaaaggaggtcaagtaccctggtagccgccgtagcaaccgtgttgctggtaatggcttctggagagcagcaggctcggaggtgcccatctattacaaaccagaaggtgctgctgacgacatgctagttgggatgaggcggactctagtgttccactacggaaagtcacgatctgcagagcgcactgaatgggccatgcatgagtttcagcttgctggtgctggtctccttcctcaccctatgatgaggcgtgcaaccagcaatggttcagagccaccctgtggctgccttgaagcgacattcgctaagaaaagtgatggtctctctgcaactcttcgtgccaagcgtgattctgcccctcttatgagaatcatggtagaacccgatagctcatgggtgatctgctgcatctacaagaagaggcagcgtgccccgcctgttgttatccctcctgtcattggcgatgtaggggaagctatcatccctcatgctattggcgatgcaagggaaggccaacttcacttcattgacttcctggggcagccagctcgcaatgatccatcctcgcccatagctgcaccattgacccctcctctttggaggaagggagtgatgagtctgccggtgatggtgaatataaggatggtgatggcatga
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| Protein seq | MANTGLSIPMVNGATIHLLPGFRFRPTDDELVIKYLYPRAFHVPLPCAIITDVDIHHHNPWDIVPVAEREKGKHFFTRKEVKYPGSRRSNRVAGNGFWRAAGSEVPIYYKPEGAADDMLVGMRRTLVFHYGKSRSAERTEWAMHEFQLAGAGLLPHPMMRRATSNGSEPPCGCLEATFAKKSDGLSATLRAKRDSAPLMRIMVEPDSSWVICCIYKKRQRAPPVVIPPVIGDVGEAIIPHAIGDAREGQLHFIDFLGQPARNDPSSPIAAPLTPPLWRKGVMSLPVMVNIRMVMA |
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| Function | NAC domain-containing protein 83 [UniProtKB/Swiss-Prot:Q9FY93] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_Ung0071140 | OsLiXu_Ung0071140.01 | ChrUN-Ctg535 | 214669 | 217030 | + | NAM | ||
| CDS seq | atggctaacaccggacttagcatccccatggtgaatggtgccacaatccacctcctccctggtttccggttccgtccaactgacgatgagctagtcatcaaatacctctacccccgtgcttttcatgtgccactgccctgtgcgatcatcaccgatgttgacatccatcatcacaacccctgggacatcgtcccagtggcggagagggagaaagggaagcacttcttcacaagaaaggaggtcaagtaccctggtagccgccgtagcaaccgtgttgctggtaatggcttctggagagcagcaggctcggaggtgcccatctattacaaaccagaaggtgctgctgacgacatgctagttgggatgaggcggactctagtgttccactacggaaagtcacgatctgcagagcgcactgaatgggccatgcatgagtttcagcttgctggtgctggtctccttcctcaccctatgatgaggcgtgcaaccagcaatggttcagagccaccctgtggctgccttgaagcgacattcgctaagaaaagtgatggtctctctgcaactcttcgtgccaagcgtgattctgcccctcttatgagaatcatggtagaacccgatagctcatgggtgatctgctgcatctacaagaagaggcagcgtgccccgcctgttgttatccctcctgtcattggcgatgtaggggaagctatcatccctcatgctattggcgatgcaagggaaggccaacttcacttcattgacttcctggggcagccagctcgcaatgatccatcctcgcccatagctgcaccattgacccctcctctttggaggaagggagtgatgagtctgccggtgatggtgaatataaggatggtgatggcatga
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| Protein seq | MANTGLSIPMVNGATIHLLPGFRFRPTDDELVIKYLYPRAFHVPLPCAIITDVDIHHHNPWDIVPVAEREKGKHFFTRKEVKYPGSRRSNRVAGNGFWRAAGSEVPIYYKPEGAADDMLVGMRRTLVFHYGKSRSAERTEWAMHEFQLAGAGLLPHPMMRRATSNGSEPPCGCLEATFAKKSDGLSATLRAKRDSAPLMRIMVEPDSSWVICCIYKKRQRAPPVVIPPVIGDVGEAIIPHAIGDAREGQLHFIDFLGQPARNDPSSPIAAPLTPPLWRKGVMSLPVMVNIRMVMA
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0512000 | SBH | 0.0 | 0.0 | 15.876805 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g31330 | SBH | 0.0 | 0.0 | 4.067558 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0512000 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0015070 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0015010 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0014950 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0014660 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0015090 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0289300 | SBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0015270 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0300900 | SBH | 0.010992 | 0 | 0.0252095 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0015240 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0015190 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0014890 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0014640 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0014940 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G014780 | SBH | 0.0 | 0.0 | 0.521828 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0015080 | SBH | 0.0 | 0.0 | 0.0 |
