Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_Ung0066700 | OGI:11027560 | 8/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | ChrUN-Ctg495:428643-429137 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ttagtatttttcgaataaataagaaaagggtgcacgatctcgacgaattacttctgaataaatcccgtactccttggggatcatatccccaatcaacttctttgcctccccctcaacttCccctagcaaaagcaaatgaaaaggagaagaaggAagggatgccaactaacccaaaatcaccgaagaaaacaccatttacacaaagaaaggccgaaggccttgtcagcgggatcgagagaaacgccccagtcgcatgccaagggattcaccctcagcatgcaaaactccaccaaatcccGgtagctgaatcgacaagctatcttttgaagaagggtccaacgcgacaatgtggggcttcatctccgtgtcaacagcccggcgtcgagtccgaaaggcggtgaagttgtcatagccagtggggtacgggaccttgtggtgaaccatttctccatccattggcggctccacttcggcatgaaggccgaaatcggccat
More
|
||||||||||
| CDS seq | atggccgatttcggccttcatgccgaagtggagccgccaatggatggagaaatggttcaccacaaggtcccgtaccccactggctatgacaacttcaccgcctttcggactcgacgccgggctgttgacacggagatgaagccccacattgtcgcgttggacccttcttcaaaagatagcttgtcgattcagctacCgggatttggtggagttttgcatgctgaggggGaagttgagggggaggcaaagaagttgattggggatatgatccccaaggagtacgggatttattcagaagtaattcgtcgagatcgtgcacccttttcttatttattcgaaaaatactaa |
||||||||||
| Protein seq | MADFGLHAEVEPPMDGEMVHHKVPYPTGYDNFTAFRTRRRAVDTEMKPHIVALDPSSKDSLSIQLPGFGGVLHAEGEVEGEAKKLIGDMIPKEYGIYSEVIRRDRAPFSYLFEKY |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_Ung0066700 | OsLiXu_Ung0066700.01 | ChrUN-Ctg495 | 428643 | 429137 | - | NAM | ||
| CDS seq | atggccgatttcggccttcatgccgaagtggagccgccaatggatggagaaatggttcaccacaaggtcccgtaccccactggctatgacaacttcaccgcctttcggactcgacgccgggctgttgacacggagatgaagccccacattgtcgcgttggacccttcttcaaaagatagcttgtcgattcagctacCgggatttggtggagttttgcatgctgaggggGaagttgagggggaggcaaagaagttgattggggatatgatccccaaggagtacgggatttattcagaagtaattcgtcgagatcgtgcacccttttcttatttattcgaaaaatactaa
More
|
|||||||
| Protein seq | MADFGLHAEVEPPMDGEMVHHKVPYPTGYDNFTAFRTRRRAVDTEMKPHIVALDPSSKDSLSIQLPGFGGVLHAEGEVEGEAKKLIGDMIPKEYGIYSEVIRRDRAPFSYLFEKY |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 2.010175 | 0.0 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g17090 | SBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0147100 | SBH | 0.0175125 | 0.0390025 | 0.2922955 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0010170 | RBH | 9.421256 | 0.615457 | 4.761671 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0009970 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
