Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_Ung0066530 | OGI:11027260 | 15/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | ChrUN-Ctg495:332017-334771 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | tggcatgacgtaatatataccaatggtgtggcgaatcacgacactttggaaacactcaacaaattcataatttcccacagtaagaaaacattaatgacgacgaactgatgtttccctgtcgatctatcttcgcattcagtcgcttcatttggcctgatcagtgagcaattcttttcgttttcgccatctactcttcatcgtcccattcatccgccgattcatttcgctcatatattattacggagtacaactcaccatagttagctggtcttgtacattatcttcttcctgcaatgttaaaagacgtacatatatagtcattatcagcagtacaaaagggatatatggaagtaaactttcaagtgacagaaaaactattcagctacaacaaaaatactttgtatagacatttcttaatactacataggcactttttagatgtctctacaatactctagaggcatatccaaaaatgtcacataaatatcttctagtaaattgtctctataaatgaataggtactttacacaatgtctctatgtcttctgacattctcatagaagaacctatttatgtctataagagagtatatagactttttgtaatggcaATataacctgtcacaacaatagcaaaccaatataaaaaaggaaaaacaaaactctagactttgcaattgccaatccttaaactatggacctcttgaatatatcattttcaacttgattggtttaaccatcgctactacttgtacatttgtgccccgtgttacttttatctagttacttagtatagattaaaatttctataagtgcctctatatatagagattgacatgactcaagataaatttaacaaattatgctaaaaaagacctctaaaatatctctagattaaaagtgtttttggtaatatttgcttccaaaaactgtctctacactttagaacacctgattttataagcattttataaactgcctctgcAaaagtgcatgaggTtttttttagttatcaaggtcattatcaaattataatgaatcagtacgaatttaatttgcacatgtaataataagatgacgctggcctagaattaatattctttgatttattgttgcatgctgtggtcaatgtataagcttggaggaactataattatgtaaacacgactgggcgaatgaagagaagacgacgcgtttaccttccatcgcccatttggaataatgtgtatagagatgataagattagataaaataagcagtagaattgagttggatgagttgtgtgtgattacatgattttcgtctgcttaatctggtactggtcagatgccccatgtttctccttttccttctcactgttagccaatgcaagaaaacaatgaaatcacatatatggtcacgataaaacaaagtactcatacacaagcagttttttttggttacatgttacaattaacttcaaagaacatttgaagtagtcataaaggtcacaataatatgtgggagctattttacggtcctccatttttactcagggattgaaatttctgaaatttctaaccctctagcaggtaacaatctcggcgacattttcaggttttttccccttttttttgaaatttggtcaaattatattcagatttagttataatctgctaaattttcaaaaaaattccgtgcaaaataaaagtgtgaacctgtctttacctagctatatggctacatatatacggtgctatgagtaaacaatacgtagtaaatcgtaactattggattttttttttatactttatctgttgacgaatatttatactttattaatgtccataattactttttgcatccaaggaatttttagggcgccaaaaaaatataagtgcatataattaattaactacttaattggtggcaaaataatcaggatgggaaagactgcacggttaacctgacgtggagaatttgctcaggagacgacggccgccgtggccgggtgatctccatcccgacggcggcgcagctttccggccacatcgcctgcctcgccgtggcgtagttcttgccgctgccgacctcgatcccttcgagcagctcgcaagcctccgccgccaccacctccctgtcggcggcggcggggtcgttcgccgagtaccacgtgccgacgagctccttccccgtgcacgcctccgccctcagcatcagcagcttccgcagccgcgcgtaggcgaccttgtcgcggagcagcgccgccacgtagcccgggagtgggcgccggcgccgggcctccgggagcgccaccgcggcgccctcccacaccacgcagtggtcgtgcgccagcgccagcgcgaggcccagcgacgtcgcgtcgccgttcacggcggccgcggtgggcgccggcatctcgagcaggagccggaccacctcgcccacgcgcgccgccacctgttcgtccggctgtccggcggcgtcgtggtcgacgccgtcgcagaaggagccgagcctggaggtggtgacgaggcctctcagccccggcgtgtcccggacggccgtgaggctggcgatgaggtccccgatggcgtcgtcggtgagatactggtggccgtcgctgctggccatggtgaggacgaagatgccatcgattggggattgcaccgtgcagaaacccattgctgatggctgtactgtatcgagtcagtcaaccaatgaactcaactgattagctttctaccagggaaatttgtttttgggagtttggacga
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| CDS seq | atgggtttctgcacggtgcaatccccaatcgatggcatcttcgtcctcaccatggccagcagcgacggccaccagtatctcaccgacgacgccatcggggacctcatcgccagcctcacggccgtccgggacacgccggggctgagaggcctcgtcaccacctccaggctcggctccttctgcgacggcgtcgaccacgacgccgccggacagccggacgaacaggtggcggcgcgcgtgggcgaggtggtccggctcctgctcgagatgccggcgcccaccgcggccgccgtgaacggcgacgcgacgtcgctgggcctcgcgctggcgctggcgcacgaccactgcgtggtgtgggagggcgccgcggtggcgctcccggaggcccggcgccggcgcccactcccgggctacgtggcggcgctgctccgcgacaaggtcgcctacgcgcggctgcggaagctgctgatgctgagggcggaggcgtgcacggggaaggagctcgtcggcacgtggtactcggcgaacgaccccgccgccgccgacagggaggtggtggcggcggaggcttgcgagctgctcgaagggatcgaggtcggcagcggcaagaactacgccacggcgaggcaggcgatgtggccggaaagctgcgccgccgtcgggatggagatcacccggccacggcggccgtcgtctcctgagcaaattctccacgtcagtgagaaggaaaaggagaaacatggggcatctgaccagtaccagattaagcagacgaaaatcatgaagaagataatgtacaagaccagctaa
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| Protein seq | MGFCTVQSPIDGIFVLTMASSDGHQYLTDDAIGDLIASLTAVRDTPGLRGLVTTSRLGSFCDGVDHDAAGQPDEQVAARVGEVVRLLLEMPAPTAAAVNGDATSLGLALALAHDHCVVWEGAAVALPEARRRRPLPGYVAALLRDKVAYARLRKLLMLRAEACTGKELVGTWYSANDPAAADREVVAAEACELLEGIEVGSGKNYATARQAMWPESCAAVGMEITRPRRPSSPEQILHVSEKEKEKHGASDQYQIKQTKIMKKIMYKTS |
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| Function | Enoyl-CoA delta isomerase 3 [UniProtKB/Swiss-Prot:O23300] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_Ung0066530 | OsLiXu_Ung0066530.01 | ChrUN-Ctg495 | 332017 | 334771 | - | NAM | ||
| CDS seq | atgggtttctgcacggtgcaatccccaatcgatggcatcttcgtcctcaccatggccagcagcgacggccaccagtatctcaccgacgacgccatcggggacctcatcgccagcctcacggccgtccgggacacgccggggctgagaggcctcgtcaccacctccaggctcggctccttctgcgacggcgtcgaccacgacgccgccggacagccggacgaacaggtggcggcgcgcgtgggcgaggtggtccggctcctgctcgagatgccggcgcccaccgcggccgccgtgaacggcgacgcgacgtcgctgggcctcgcgctggcgctggcgcacgaccactgcgtggtgtgggagggcgccgcggtggcgctcccggaggcccggcgccggcgcccactcccgggctacgtggcggcgctgctccgcgacaaggtcgcctacgcgcggctgcggaagctgctgatgctgagggcggaggcgtgcacggggaaggagctcgtcggcacgtggtactcggcgaacgaccccgccgccgccgacagggaggtggtggcggcggaggcttgcgagctgctcgaagggatcgaggtcggcagcggcaagaactacgccacggcgaggcaggcgatgtggccggaaagctgcgccgccgtcgggatggagatcacccggccacggcggccgtcgtctcctgagcaaattctccacgtcagtgagaaggaaaaggagaaacatggggcatctgaccagtaccagattaagcagacgaaaatcatgaagaagataatgtacaagaccagctaa
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| Protein seq | MGFCTVQSPIDGIFVLTMASSDGHQYLTDDAIGDLIASLTAVRDTPGLRGLVTTSRLGSFCDGVDHDAAGQPDEQVAARVGEVVRLLLEMPAPTAAAVNGDATSLGLALALAHDHCVVWEGAAVALPEARRRRPLPGYVAALLRDKVAYARLRKLLMLRAEACTGKELVGTWYSANDPAAADREVVAAEACELLEGIEVGSGKNYATARQAMWPESCAAVGMEITRPRRPSSPEQILHVSEKEKEKHGASDQYQIKQTKIMKKIMYKTS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0269900 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g16960 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0269900 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0010150 | SBH | 0.0 | 13.504879 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0010040 | SBH | 0.0 | 9.040081 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0010060 | SBH | 0.0 | 10.966265 | 0.314569 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0010060 | SBH | 0.0 | 0.351004 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0010020 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0145200 | SBH | 0 | 2.156771 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0010030 | SBH | 0.000000 | 1.024298 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0147500 | RBH | 0.0217065 | 2.2210085 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0010140 | SBH | 0.000000 | 0.308513 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0010330 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0010000 | SBH | 0.0 | 5.076153 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0009890 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0010030 | SBH | 0.000000 | 3.402503 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G010140 | SBH | 0.0 | 0.765429 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0009910 | SBH | 0.0 | 12.988194 | 0.0 |
