Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_Ung0065340 | OGI:11020980 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | ChrUN-Ctg484:455036-461336 | ||||||||
| Gene Symbol | RLCK320, OsRLCK320 | ||||||||||
| DNA seq | cactactagcattgtagagacacccttcaaccacaaggcatatatatctcaaaagacaaagcagttcttgccacacagagaacatattcccttctcccccctaatctcatctcatcttcaacgtgaagcttcatcttctcacctccataattttcttctgaagcttctcaagattcttgcatgcctttaccttagtactacctctctatatctcactgaagcagatagatagattgatagatagatagatagatagcttccaatgccattgccaatggcggcagtgtagatttgattagcttgtcaaaacctcggcttctcaccaatggcgtcgtgtcgtcgtcctgctcctcttcgccttatcgtgttcttggccatcgtcttgctgcgctggtcgaccaatggcaacgccaccgccggtggcgacgacgcgctgcgcggcgacgcgctggcgctggtgaggctcagggcgtcgctgcggtgccacgcgcacgcgctgcgtgattggtcggcgggcaatgtcgccgccgtgtgcgcgtggaccggggtgcggtgcgccggcggccgggtggtgtcggtggacgttgccaacatgaatgtgtccaccggcgcgcccgtgtcggcggcggtggcggggctcgacgcgctcgccaacctctcgctcgccgggaacggcatcgtgggcgcggtgaccgcgtccgcgctcccggcgctccggttcgtcaatgtctccggcaaccagctcggcggcggcctcgacggctgggacttcgcgtcgctgcccagcctcgaggtgttcgacgcgtacgacaacaacttctcctccccgctccccgccggcgtcgtggcgctgcgccggctccggtacctcgacctcggcggcaacttcttctccggcgagatacccgcggcgtacggcgggatggcggcgctggagtacctgtccctcaacggcaacaacctgcagggcgcgatcccgccggagctcggcaacctgaccagcctcagggagctctacctcgggtactacaacgtgttcgacggcggcatcccgccggagctcggccggctgcgcaacctcaccatgctggacatctccaactgcggcctgagcggccgcatcccgccggagctcggcgcgctcgccgccctcgacacgctgttcctccacaccaaccagctgtccggcgccatcccgccggagctcggcaacctcacggcgctcaccgcgctcgacctctccaacaacgcgctcaccggcgaggtccccgccacgctcgcgtcgctcacctcgctccggctgctcaacctcttcctcaaccgcctccacgggcccgtccccgacttcgtcgccgcgctgccgcggctggagacggtgcagctgttcatgaacaacctcaccggccgcgtccccgcgggcctcggcgcgaacgcggcgctccggctcgtggacatttcgtcgaacaggctgaccggcatggtgccggagatgctgtgcgcctcgggggagctccacaccgccatcctcatgaacaacttcctcttcggccccatccccgcctcgctcggctcgtgctccagcctcacccgcgtccgcctcggccagaactacctcaacggcaccatccccgccggcttgctctacctgccacgcctcaacctgctcgagctccagaacaacctgctctccggcgatgtcccggcgaacccgagcccggccatggcggccgcctcgcagtcgtcgcagctggctcagctcaacctctccagcaaccagctgtccggaccgctgccgagctccattgccaacctcaccgcgctgcagacgctgctcgtcagcaacaaccggctcgccggcgccgtgccgccggaggtcggcgagctccggcggctggtgaagcttgacctgagcggcaacgcgctgtccgggacgataccggcggccattgggcggtgcggcgaactcacctacctcgacctcagcaagaacaacctctccggcgcgatccccgaggcgatcgccgggatacgcgtgctgaattacctcaacctgtcgaggaaccagctcgaggaggcgatcccggcggcgatcggggcgatgagcagcctcacggcggcggacttctcgtacaacgacctgtccggcgagctgcccgacgcgggccagctcggctacctcaacgcgacggcgttcgccggcaacccgaggctgtgcgggccgttgctgggccggccgtgcggctacggcggcggcggcgccgccgccgtggggcgggcgggtcgtcgtcggcgccggtggtgacgacgcggcagcgggcggcgggaggggacttcaagctggtgctcgcgctggggcttctggtgtgctcggtggtgttcgccgcggcggccgtgctccgcgcgcgctcctgccgcggcggcggcggacccgacggcggcggcgcgtggcggttcacggcgttccacaaggtggacttcggcatcgcggaggtgatcgagtcaatgaaggacgggaacgtggtgggccgcggcggcgccggcgtggtctacgtcggccgcacccgctccggcggctcgatcgccgtgaagcgcctcaacacctcctcctcctccgccgccgccgcgggcggcggcgaggcggcgcgccacgaccacgggttccgcgccgagatccgaacgctgggcagcatccgccaccggaacatcgtccgcctcctcgccttctgcagccgccgcggcggcagcggcggcggcgaggcggcgagcagcagcaacgtgctggtgtacgagtacatggcgaacggcagcctcggcgaggtgctccacggcaagggcggcggcttcctgtcgtgggatcgccggtacaggattgccgtcgaggcggcgcgggggctctgctacctccaccacgactgctccccgatgatcgtccaccgcgacgttaagtccaacaacatcctcctcggcgacaacttcgaggcgcacgtcgccgacttcggcctcgccaagttcctccgctccggcggcggcgccaccgcctcgtcggagtgcatgtccgccgtcgccggctcgtacggctacatcgccccaggtacgcccgcccacgcgttgcacaccttcacgtcgcacaaatcgtacggtcgcgattgacttaggaggagagaaaacgatcccgaccgtccgatggatcaatcctgatccgcttgtcgctgtcgcatgcagtcagtgtgtagcagcagcactgaccactgactggcgctctcctctgtcactggattgcgggtcccacatatccaaagtcaaaacaagggaaactttgccaaaaactgctcacatgctaggcacatagtaccagtttcattctaaactgtttgatttagttttgaaactatatttaaaatttcgggtgaattttgtcaaagagtcaaaggtagggtaggttttgaatttgtggtagccagcactgcagcgggcgcagatgcaatctgatcttgaacatgacagacgccgacgtggcacgtagcaggtgtggggcccacggaggggggtttggcagaagctgtaggagtagtaggagggtggtgcactgaacagtgggcccgtgaccgaaagcggccaaaaaggggtcctctggtcaggcatgcaaagcactcgagagcccaataatttttcgtgggtgggtgtggggcccaccggatagtgacctgacgaggcggtggacccgcgttgccagtgggcacacggccatgccgccccatgcagcgttgtggacggcggcgtggcagtccagcagagccattgccacagagtagcagcattggacttgccaaaagaaaaccagcaagtagcaactcctcctaacaattactccttctgttcaacatataagcgattttaagtagatatgatatattttaatataataaatttagacagaaaaattatttacatttattatatTAtattatatcatatttaactaaaattctttatatttgaaaagaagggagtacgtcgaaatcaggataaccctgattcaacgttttctcgagtaaccatacatacgagccatcgagatgataattagattttatattaccatttatcggttagaaacgacggcgatattcaaaggggatacaatttcagtacgtatatagatcatcggacaaaggtgatttgtctgtcgatgattttagcggatacacttagcattggtcccgggttaagggaagagatgagagagcgaccgagagcttttagggttcggttacgctagctgctgcatctttgaccggcatggggcttaacccagtaaaaaagcctcatcatctcctcttcttctcctctcctgggttttcgccaaagcgtctcgctgttacgtcgtctccaaagctatcaaacggcacgccggttgctgcttgcttgcttctgcttttgaacggcacagtatatgctacagcttagctagctaggcgccttcgctgttacggtcacgcactttgcttgctacttttgtttttaattatcttttagagcaagtttaatagtatagccaactactagctccaattcatctatagttaatctaatagcttattcatacaatagttacgtactacactattaatacctggtcccacctgtcatacacacactgcgtattggagtccgtgctacagccgactacaaatctgtagcccgctgattttctctctccttatttatctctttaaaatatgtttgcagctgacttatagcctgctattgtacctgctcttatacttctttggttagtttaaaaactgggtatttggggggcttggattagtgcaagtatcctaggtgagcatgggctttgatacagacagggatttgggcgtgggatggattggatgggtgatctctcttgatccatgagaagaattttccttggattttggggagtgttggtaggataaattaacaatgggggttaattaatttgttaatgcaatgttacgggattgagattccaatcaatttgattatgggatggtactggtactactagtgtacttactatactcctgtaggcatttctcttgggattcgttgcagaatgttgcgtgcacttggttttgtccttggtttctactatgcatatatagggggggcaactgctaggttactgttgcttgtgtactaatcaaatcggcaactgagatacacttagatttcgtttcgcacgagagggggtagtttataccagaaggtgccatgcatcacgttttggactggtcctagctggccccctccttagcttttgtacctttcaacattggggttttttttaccagttttacggatatttaacttttgcgcgtggctaactgtgcggttttgtttttagagtatgcttacactctaagggtggacgagaagagcgatgtctacagctatggagtggtcctcctggagctcatcacagggcggcggcccgtgggggatttcggggaaggggtggacatcgtgcagtggacgaagagggtcaccgatggccggcgggagagcgtgcaccggatcgtcgatcgccggattagcacggtgccgatggacgaggtggcgcacatcttcttcgtctccatgctgtgcgtccaggagaacagcgtggagcggccgacgatgagggaggtggtgcagatgctgtccgaattcccccgccacgggtcggaccagccgtcaccgtcgtcgtcggcaccggagacgggggaggagagcagccctgagaaggagcccaactgctacaagctgttcccggacttgctgacctaagttgagagcaagtacctgttctggtgatgggggcacaaaaacacaattaatttgccattgttacaggactcggtggcatgaaaggactggagtaattaagtggtactaattgagaatttggagccagcattctagtgcaagtttgttggtaggcagacagtgtggtggtgacaagagctggggaggaagatcaaataacatatgtataacttttgtaactttattttctttcatctccccctttttttttccctaattcttttgtcatcaaaggtgtatagggtttgatcatatgctaccttctaggtgattgtgctgtccaatgtaatagtcacttccatgatagctttagccctttgtaatctcctggtaatcttgagccaccatacattgtcatttccttttacactagtttcttctttatatgctcattatgtactactactggttccatatatactatagttcatggctttttgtattattc
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| CDS seq | atggcgtcgtgtcgtcgtcctgctcctcttcgccttatcgtgttcttggccatcgtcttgctgcgctggtcgaccaatggcaacgccaccgccggtggcgacgacgcgctgcgcggcgacgcgctggcgctggtgaggctcagggcgtcgctgcggtgccacgcgcacgcgctgcgtgattggtcggcgggcaatgtcgccgccgtgtgcgcgtggaccggggtgcggtgcgccggcggccgggtggtgtcggtggacgttgccaacatgaatgtgtccaccggcgcgcccgtgtcggcggcggtggcggggctcgacgcgctcgccaacctctcgctcgccgggaacggcatcgtgggcgcggtgaccgcgtccgcgctcccggcgctccggttcgtcaatgtctccggcaaccagctcggcggcggcctcgacggctgggacttcgcgtcgctgcccagcctcgaggtgttcgacgcgtacgacaacaacttctcctccccgctccccgccggcgtcgtggcgctgcgccggctccggtacctcgacctcggcggcaacttcttctccggcgagatacccgcggcgtacggcgggatggcggcgctggagtacctgtccctcaacggcaacaacctgcagggcgcgatcccgccggagctcggcaacctgaccagcctcagggagctctacctcgggtactacaacgtgttcgacggcggcatcccgccggagctcggccggctgcgcaacctcaccatgctggacatctccaactgcggcctgagcggccgcatcccgccggagctcggcgcgctcgccgccctcgacacgctgttcctccacaccaaccagctgtccggcgccatcccgccggagctcggcaacctcacggcgctcaccgcgctcgacctctccaacaacgcgctcaccggcgaggtccccgccacgctcgcgtcgctcacctcgctccggctgctcaacctcttcctcaaccgcctccacgggcccgtccccgacttcgtcgccgcgctgccgcggctggagacggtgcagctgttcatgaacaacctcaccggccgcgtccccgcgggcctcggcgcgaacgcggcgctccggctcgtggacatttcgtcgaacaggctgaccggcatggtgccggagatgctgtgcgcctcgggggagctccacaccgccatcctcatgaacaacttcctcttcggccccatccccgcctcgctcggctcgtgctccagcctcacccgcgtccgcctcggccagaactacctcaacggcaccatccccgccggcttgctctacctgccacgcctcaacctgctcgagctccagaacaacctgctctccggcgatgtcccggcgaacccgagcccggccatggcggccgcctcgcagtcgtcgcagctggctcagctcaacctctccagcaaccagctgtccggaccgctgccgagctccattgccaacctcaccgcgctgcagacgctgctcgtcagcaacaaccggctcgccggcgccgtgccgccggaggtcggcgagctccggcggctggtgaagcttgacctgagcggcaacgcgctgtccgggacgataccggcggccattgggcggtgcggcgaactcacctacctcgacctcagcaagaacaacctctccggcgcgatccccgaggcgatcgccgggatacgcgtgctgaattacctcaacctgtcgaggaaccagctcgaggaggcgatcccggcggcgatcggggcgatgagcagcctcacggcggcggacttctcgtacaacgacctgtccggcgagctgcccgacgcgggccagctcggctacctcaacgcgacggcgttcgccggcaacccgaggctgtgcgggccgttgctgggccggccgtgcggctacggcggcggcggcgccgccgcccgggcggcgggaggggacttcaagctggtgctcgcgctggggcttctggtgtgctcggtggtgttcgccgcggcggccgtgctccgcgcgcgctcctgccgcggcggcggcggacccgacggcggcggcgcgtggcggttcacggcgttccacaaggtggacttcggcatcgcggaggtgatcgagtcaatgaaggacgggaacgtggtgggccgcggcggcgccggcgtggtctacgtcggccgcacccgctccggcggctcgatcgccgtgaagcgcctcaacacctcctcctcctccgccgccgccgcgggcggcggcgaggcggcgcgccacgaccacgggttccgcgccgagatccgaacgctgggcagcatccgccaccggaacatcgtccgcctcctcgccttctgcagccgccgcggcggcagcggcggcggcgaggcggcgagcagcagcaacgtgctggtgtacgagtacatggcgaacggcagcctcggcgaggtgctccacggcaagggcggcggcttcctgtcgtgggatcgccggtacaggattgccgtcgaggcggcgcgggggctctgctacctccaccacgactgctccccgatgatcgtccaccgcgacgttaagtccaacaacatcctcctcggcgacaacttcgaggcgcacgtcgccgacttcggcctcgccaagttcctccgctccggcggcggcgccaccgcctcgtcggagtgcatgtccgccgtcgccggctcgtacggctacatcgccccagagtatgcttacactctaagggtggacgagaagagcgatgtctacagctatggagtggtcctcctggagctcatcacagggcggcggcccgtgggggatttcggggaaggggtggacatcgtgcagtggacgaagagggtcaccgatggccggcgggagagcgtgcaccggatcgtcgatcgccggattagcacggtgccgatggacgaggtggcgcacatcttcttcgtctccatgctgtgcgtccaggagaacagcgtggagcggccgacgatgagggaggtggtgcagatgctgtccgaattcccccgccacgggtcggaccagccgtcaccgtcgtcgtcggcaccggagacgggggaggagagcagccctgagaaggagcccaactgctacaagctgttcccggacttgctgacctaa
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| Protein seq | MASCRRPAPLRLIVFLAIVLLRWSTNGNATAGGDDALRGDALALVRLRASLRCHAHALRDWSAGNVAAVCAWTGVRCAGGRVVSVDVANMNVSTGAPVSAAVAGLDALANLSLAGNGIVGAVTASALPALRFVNVSGNQLGGGLDGWDFASLPSLEVFDAYDNNFSSPLPAGVVALRRLRYLDLGGNFFSGEIPAAYGGMAALEYLSLNGNNLQGAIPPELGNLTSLRELYLGYYNVFDGGIPPELGRLRNLTMLDISNCGLSGRIPPELGALAALDTLFLHTNQLSGAIPPELGNLTALTALDLSNNALTGEVPATLASLTSLRLLNLFLNRLHGPVPDFVAALPRLETVQLFMNNLTGRVPAGLGANAALRLVDISSNRLTGMVPEMLCASGELHTAILMNNFLFGPIPASLGSCSSLTRVRLGQNYLNGTIPAGLLYLPRLNLLELQNNLLSGDVPANPSPAMAAASQSSQLAQLNLSSNQLSGPLPSSIANLTALQTLLVSNNRLAGAVPPEVGELRRLVKLDLSGNALSGTIPAAIGRCGELTYLDLSKNNLSGAIPEAIAGIRVLNYLNLSRNQLEEAIPAAIGAMSSLTAADFSYNDLSGELPDAGQLGYLNATAFAGNPRLCGPLLGRPCGYGGGGAAARAAGGDFKLVLALGLLVCSVVFAAAAVLRARSCRGGGGPDGGGAWRFTAFHKVDFGIAEVIESMKDGNVVGRGGAGVVYVGRTRSGGSIAVKRLNTSSSSAAAAGGGEAARHDHGFRAEIRTLGSIRHRNIVRLLAFCSRRGGSGGGEAASSSNVLVYEYMANGSLGEVLHGKGGGFLSWDRRYRIAVEAARGLCYLHHDCSPMIVHRDVKSNNILLGDNFEAHVADFGLAKFLRSGGGATASSECMSAVAGSYGYIAPEYAYTLRVDEKSDVYSYGVVLLELITGRRPVGDFGEGVDIVQWTKRVTDGRRESVHRIVDRRISTVPMDEVAHIFFVSMLCVQENSVERPTMREVVQMLSEFPRHGSDQPSPSSSAPETGEESSPEKEPNCYKLFPDLLT |
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| Function | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 [UniProtKB/Swiss-Prot:O49545] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_Ung0065340 | OsLiXu_Ung0065340.01 | ChrUN-Ctg484 | 455110 | 461336 | + | NAM | ||
| CDS seq | atggcgtcgtgtcgtcgtcctgctcctcttcgccttatcgtgttcttggccatcgtcttgctgcgctggtcgaccaatggcaacgccaccgccggtggcgacgacgcgctgcgcggcgacgcgctggcgctggtgaggctcagggcgtcgctgcggtgccacgcgcacgcgctgcgtgattggtcggcgggcaatgtcgccgccgtgtgcgcgtggaccggggtgcggtgcgccggcggccgggtggtgtcggtggacgttgccaacatgaatgtgtccaccggcgcgcccgtgtcggcggcggtggcggggctcgacgcgctcgccaacctctcgctcgccgggaacggcatcgtgggcgcggtgaccgcgtccgcgctcccggcgctccggttcgtcaatgtctccggcaaccagctcggcggcggcctcgacggctgggacttcgcgtcgctgcccagcctcgaggtgttcgacgcgtacgacaacaacttctcctccccgctccccgccggcgtcgtggcgctgcgccggctccggtacctcgacctcggcggcaacttcttctccggcgagatacccgcggcgtacggcgggatggcggcgctggagtacctgtccctcaacggcaacaacctgcagggcgcgatcccgccggagctcggcaacctgaccagcctcagggagctctacctcgggtactacaacgtgttcgacggcggcatcccgccggagctcggccggctgcgcaacctcaccatgctggacatctccaactgcggcctgagcggccgcatcccgccggagctcggcgcgctcgccgccctcgacacgctgttcctccacaccaaccagctgtccggcgccatcccgccggagctcggcaacctcacggcgctcaccgcgctcgacctctccaacaacgcgctcaccggcgaggtccccgccacgctcgcgtcgctcacctcgctccggctgctcaacctcttcctcaaccgcctccacgggcccgtccccgacttcgtcgccgcgctgccgcggctggagacggtgcagctgttcatgaacaacctcaccggccgcgtccccgcgggcctcggcgcgaacgcggcgctccggctcgtggacatttcgtcgaacaggctgaccggcatggtgccggagatgctgtgcgcctcgggggagctccacaccgccatcctcatgaacaacttcctcttcggccccatccccgcctcgctcggctcgtgctccagcctcacccgcgtccgcctcggccagaactacctcaacggcaccatccccgccggcttgctctacctgccacgcctcaacctgctcgagctccagaacaacctgctctccggcgatgtcccggcgaacccgagcccggccatggcggccgcctcgcagtcgtcgcagctggctcagctcaacctctccagcaaccagctgtccggaccgctgccgagctccattgccaacctcaccgcgctgcagacgctgctcgtcagcaacaaccggctcgccggcgccgtgccgccggaggtcggcgagctccggcggctggtgaagcttgacctgagcggcaacgcgctgtccgggacgataccggcggccattgggcggtgcggcgaactcacctacctcgacctcagcaagaacaacctctccggcgcgatccccgaggcgatcgccgggatacgcgtgctgaattacctcaacctgtcgaggaaccagctcgaggaggcgatcccggcggcgatcggggcgatgagcagcctcacggcggcggacttctcgtacaacgacctgtccggcgagctgcccgacgcgggccagctcggctacctcaacgcgacggcgttcgccggcaacccgaggctgtgcgggccgttgctgggccggccgtgcggctacggcggcggcggcgccgccgcccgggcggcgggaggggacttcaagctggtgctcgcgctggggcttctggtgtgctcggtggtgttcgccgcggcggccgtgctccgcgcgcgctcctgccgcggcggcggcggacccgacggcggcggcgcgtggcggttcacggcgttccacaaggtggacttcggcatcgcggaggtgatcgagtcaatgaaggacgggaacgtggtgggccgcggcggcgccggcgtggtctacgtcggccgcacccgctccggcggctcgatcgccgtgaagcgcctcaacacctcctcctcctccgccgccgccgcgggcggcggcgaggcggcgcgccacgaccacgggttccgcgccgagatccgaacgctgggcagcatccgccaccggaacatcgtccgcctcctcgccttctgcagccgccgcggcggcagcggcggcggcgaggcggcgagcagcagcaacgtgctggtgtacgagtacatggcgaacggcagcctcggcgaggtgctccacggcaagggcggcggcttcctgtcgtgggatcgccggtacaggattgccgtcgaggcggcgcgggggctctgctacctccaccacgactgctccccgatgatcgtccaccgcgacgttaagtccaacaacatcctcctcggcgacaacttcgaggcgcacgtcgccgacttcggcctcgccaagttcctccgctccggcggcggcgccaccgcctcgtcggagtgcatgtccgccgtcgccggctcgtacggctacatcgccccagagtatgcttacactctaagggtggacgagaagagcgatgtctacagctatggagtggtcctcctggagctcatcacagggcggcggcccgtgggggatttcggggaaggggtggacatcgtgcagtggacgaagagggtcaccgatggccggcgggagagcgtgcaccggatcgtcgatcgccggattagcacggtgccgatggacgaggtggcgcacatcttcttcgtctccatgctgtgcgtccaggagaacagcgtggagcggccgacgatgagggaggtggtgcagatgctgtccgaattcccccgccacgggtcggaccagccgtcaccgtcgtcgtcggcaccggagacgggggaggagagcagccctgagaaggagcccaactgctacaagctgttcccggacttgctgacctaa
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| Protein seq | MASCRRPAPLRLIVFLAIVLLRWSTNGNATAGGDDALRGDALALVRLRASLRCHAHALRDWSAGNVAAVCAWTGVRCAGGRVVSVDVANMNVSTGAPVSAAVAGLDALANLSLAGNGIVGAVTASALPALRFVNVSGNQLGGGLDGWDFASLPSLEVFDAYDNNFSSPLPAGVVALRRLRYLDLGGNFFSGEIPAAYGGMAALEYLSLNGNNLQGAIPPELGNLTSLRELYLGYYNVFDGGIPPELGRLRNLTMLDISNCGLSGRIPPELGALAALDTLFLHTNQLSGAIPPELGNLTALTALDLSNNALTGEVPATLASLTSLRLLNLFLNRLHGPVPDFVAALPRLETVQLFMNNLTGRVPAGLGANAALRLVDISSNRLTGMVPEMLCASGELHTAILMNNFLFGPIPASLGSCSSLTRVRLGQNYLNGTIPAGLLYLPRLNLLELQNNLLSGDVPANPSPAMAAASQSSQLAQLNLSSNQLSGPLPSSIANLTALQTLLVSNNRLAGAVPPEVGELRRLVKLDLSGNALSGTIPAAIGRCGELTYLDLSKNNLSGAIPEAIAGIRVLNYLNLSRNQLEEAIPAAIGAMSSLTAADFSYNDLSGELPDAGQLGYLNATAFAGNPRLCGPLLGRPCGYGGGGAAARAAGGDFKLVLALGLLVCSVVFAAAAVLRARSCRGGGGPDGGGAWRFTAFHKVDFGIAEVIESMKDGNVVGRGGAGVVYVGRTRSGGSIAVKRLNTSSSSAAAAGGGEAARHDHGFRAEIRTLGSIRHRNIVRLLAFCSRRGGSGGGEAASSSNVLVYEYMANGSLGEVLHGKGGGFLSWDRRYRIAVEAARGLCYLHHDCSPMIVHRDVKSNNILLGDNFEAHVADFGLAKFLRSGGGATASSECMSAVAGSYGYIAPEYAYTLRVDEKSDVYSYGVVLLELITGRRPVGDFGEGVDIVQWTKRVTDGRRESVHRIVDRRISTVPMDEVAHIFFVSMLCVQENSVERPTMREVVQMLSEFPRHGSDQPSPSSSAPETGEESSPEKEPNCYKLFPDLLT
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_Ung0065340 | OsLiXu_Ung0065340.02 | ChrUN-Ctg484 | 455036 | 461272 | + | IsoSeq | ||
| CDS seq | atgtctccggcaaccagctcggcggcggcctcgacggctgggacttcgcgtcgctgcccagcctcgaggtgttcgacgcgtacgacaacaacttctcctccccgctccccgccggcgtcgtggcgctgcgccggctccggtacctcgacctcggcggcaacttcttctccggcgagatacccgcggcgtacggcgggatggcggcgctggagtacctgtccctcaacggcaacaacctgcagggcgcgatcccgccggagctcggca
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| Protein seq | MSPATSSAAASTAGTSRRCPASRCSTRTTTTSPPRSPPASWRCAGSGTSTSAATSSPARYPRRTAGWRRWSTCPSTATTCRARSRRSSA |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.046676 | 0.0 | 0.291085 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0233800 | SBH | 0.0 | 0.000000 | 0.706347 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g12620 | RBH | 0.000000 | 0.077212 | 0.206458 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0233800 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0008310 | RBH | 0.000000 | 3.306895 | 1.131359 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0008210 | RBH | 0.0 | 2.278679 | 0.622442 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0008160 | RBH | 0.0 | 2.552239 | 1.178236 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0008040 | RBH | 0.0 | 0.092315 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0008100 | RBH | 0.0 | 12.380848 | 10.893165 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0108400 | RBH | 1.819272 | 2.553034 | 3.7953255 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0008130 | RBH | 0.0 | 0.104153 | 0.110024 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0115100 | RBH | 1.574709 | 1.1240165 | 9.7468975 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_Ung0006400 | RBH | 0.0 | 0.125117 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0008270 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0008240 | RBH | 0.0 | 5.903173 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0008130 | RBH | 0.000000 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0008210 | RBH | 0.0 | 1.457053 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G008280 | RBH | 0.000000 | 0.451196 | 0.810484 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0008140 | RBH | 0.0 | 0.000000 | 0.883983 |
